{"meta":{"query_hash":"fdb2552b09cf","filters":{"venue":"Journal of Clinical Investigation"},"cohort_total":991,"direct_labels_cover":0,"predictions_cover":991,"exported":991,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/fdb2552b09cf","api":"https://metacan.xera.ac/api/v1/cohort?venue=Journal+of+Clinical+Investigation"},"results":[{"id":"W1518189766","doi":"10.1172/jci40271","title":"Tapping the riches of science","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Biotechnology and Related Fields","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Political science; State (computer science); Management; Library science; Engineering; Mathematics; Economics; Computer science","score_opus":0.08531633496964794,"score_gpt":0.4055372690247445,"score_spread":0.32022093405509655,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1518189766","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.88376594,0.00024210174,0.00032955248,0.11448021,0.0002700424,0.00003888012,4.9095185e-8,0.000005164254,0.00086803694],"genre_scores_gemma":[0.99413186,0.00026562903,0.0023716458,0.0030095114,0.00017220718,5.8320232e-8,9.899927e-8,0.0000011181434,0.000047855672],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989561,0.000037905484,0.00068128,0.000051520212,0.00021087736,0.00006232921],"domain_scores_gemma":[0.9988442,0.0001826335,0.000545929,0.000106737854,0.00024945848,0.00007100671],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024930462,0.000032434975,0.00018611124,0.000085505664,0.00005726781,0.000003864683,0.00012380115,0.0005079454,0.0000062144],"category_scores_gemma":[0.0032304479,0.000016634054,0.000089688,0.00033565948,0.0013931191,0.00008659304,0.000009033385,0.0015200125,0.000001999943],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007957464,0.0007885649,0.15533559,0.0000756469,0.00033037263,0.00008040144,0.0017983099,0.00016937473,0.44777432,0.09852671,0.013250501,0.28107446],"study_design_scores_gemma":[0.0011399632,0.0017894221,0.8638704,0.00041807894,0.00018065996,0.00023814729,0.00022056494,0.00077960227,0.093017586,0.035591364,0.0027005698,0.000053651696],"about_ca_topic_score_codex":6.37036e-7,"about_ca_topic_score_gemma":9.661823e-8,"teacher_disagreement_score":0.7085348,"about_ca_system_score_codex":0.0000071601057,"about_ca_system_score_gemma":0.00026119276,"threshold_uncertainty_score":0.6603783},"labels":[],"label_agreement":null},{"id":"W1596081492","doi":"10.1172/jci77030","title":"S6K1 controls pancreatic β cell size independently of intrauterine growth restriction","year":2015,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Instituto de Salud Carlos III; Ministerio de Ciencia e Innovación; Université de Lausanne; Sungkyunkwan University; European Commission","keywords":"P70-S6 Kinase 1; Intrauterine growth restriction; Endocrinology; Biology; Internal medicine; Insulin resistance; Insulin; Cell growth; Fetus; Pregnancy; Cell biology; Medicine; Protein kinase B; Signal transduction; Genetics","score_opus":0.083542276970126,"score_gpt":0.35210249250045367,"score_spread":0.26856021553032766,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1596081492","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930699,0.0001925816,0.0006191136,0.0015882935,0.0008008675,0.00016204115,0.0000019884033,0.00001548528,0.0035497462],"genre_scores_gemma":[0.9924971,0.0009289722,0.004634922,0.0009865294,0.0007861046,0.000002206415,0.0000056020704,0.0000117194995,0.00014682862],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9970905,0.000264696,0.0018238754,0.00011931266,0.00057795824,0.00012366561],"domain_scores_gemma":[0.9956054,0.001206312,0.0014779603,0.00015413036,0.0010178902,0.0005382802],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0022209927,0.00011241647,0.00074098003,0.00012490066,0.000017863602,0.00001468296,0.00007732029,0.00017446061,0.000048082828],"category_scores_gemma":[0.0150976,0.000084422856,0.0002138369,0.00023283895,0.00015134162,0.00023050081,0.000016122223,0.00039476366,0.000011807297],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002576135,0.00080005423,0.9404303,0.0002561041,0.0003102233,0.00005751219,0.00023402035,0.00006296806,0.038432684,0.0036025674,0.011252551,0.001984885],"study_design_scores_gemma":[0.023513835,0.008133655,0.83791953,0.0006846642,0.0012986112,0.00014795888,0.0003912232,0.0015489799,0.053946506,0.07056351,0.0016173167,0.00023422917],"about_ca_topic_score_codex":0.000021654952,"about_ca_topic_score_gemma":5.2537945e-7,"teacher_disagreement_score":0.10251079,"about_ca_system_score_codex":0.0000532623,"about_ca_system_score_gemma":0.0005432453,"threshold_uncertainty_score":0.99319863},"labels":[],"label_agreement":null},{"id":"W1598254642","doi":"10.1172/jci29103","title":"Islet   cell failure in type 2 diabetes","year":2006,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":1659,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institutes of Health; ACT Government","keywords":"Beta cell; Type 2 diabetes; Islet; Context (archaeology); Insulin resistance; Diabetes mellitus; BETA (programming language); Bioinformatics; Pathogenesis; Cell; Medicine; Biology; Cell type; Internal medicine; Endocrinology; Genetics; Computer science","score_opus":0.12311902243374906,"score_gpt":0.4066883381839086,"score_spread":0.28356931575015953,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1598254642","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.014094116,0.982595,0.0000036756,0.00037668535,0.0010623323,0.00026284004,0.0000037243385,0.000012062366,0.0015895176],"genre_scores_gemma":[0.0002456569,0.9944031,0.0018879034,0.00062956195,0.0019015094,0.000003735108,0.00008176303,0.000032511038,0.00081422],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99582684,0.0004211421,0.0030188498,0.00018724806,0.0003638998,0.00018203919],"domain_scores_gemma":[0.9958135,0.0013311239,0.0020893458,0.00020814026,0.00028800024,0.0002699036],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018934812,0.00023555293,0.0026316454,0.0003547504,0.000016716976,0.000023736864,0.000116644056,0.0005845434,0.000106679305],"category_scores_gemma":[0.0035741897,0.00016116584,0.0007216439,0.00050159165,0.00012862381,0.0001122603,0.000019120575,0.0012363318,0.00010039274],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006965898,0.0006671146,0.033953074,0.021838315,0.000364609,0.00012278136,0.000028087486,0.0000088430725,0.000033387547,0.00008431019,0.20656304,0.7362668],"study_design_scores_gemma":[0.0010204227,0.00056950416,0.0010707224,0.013922962,0.0012201951,0.000019665844,0.000005498224,0.000022936805,0.000020377169,0.00037781388,0.9816066,0.00014328644],"about_ca_topic_score_codex":0.0000030182591,"about_ca_topic_score_gemma":0.0000014165888,"teacher_disagreement_score":0.77504355,"about_ca_system_score_codex":0.00007758387,"about_ca_system_score_gemma":0.0010385774,"threshold_uncertainty_score":0.6572152},"labels":[],"label_agreement":null},{"id":"W1921456558","doi":"10.1172/jci81261","title":"Inflammatory IL-15 is required for optimal memory T cell responses","year":2015,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":111,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Holden Comprehensive Cancer Center, University of Iowa; National Center for Research Resources; American Heart Association; Roy J. and Lucille A. Carver College of Medicine, University of Iowa; National Cancer Institute; National Institutes of Health; McGill University","keywords":"Cytotoxic T cell; CD8; Biology; Memory T cell; T cell; Immunology; mTORC1; CD28; Antigen; Memory cell; Cell biology; Immune system; PI3K/AKT/mTOR pathway; Signal transduction; In vitro","score_opus":0.11659476115790512,"score_gpt":0.36437240718899455,"score_spread":0.24777764603108943,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1921456558","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9849041,0.00069655344,0.001198834,0.002008924,0.010231318,0.00016596023,0.0000043372843,0.000023207389,0.0007667806],"genre_scores_gemma":[0.96062064,0.000110210975,0.0026882603,0.0033851892,0.0008616927,0.000009299812,0.000043104632,0.000027333868,0.032254267],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976073,0.0005434827,0.0014745507,0.00014171243,0.00007811012,0.00015484232],"domain_scores_gemma":[0.99692905,0.0008139743,0.0012448478,0.00016072426,0.0007583341,0.00009308262],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0030571432,0.00011561421,0.00035397054,0.000139115,0.000079694684,0.000022431528,0.00015090246,0.00033519955,0.00020276861],"category_scores_gemma":[0.003548726,0.000096607655,0.0002800279,0.00007161406,0.00022269164,0.00044101238,0.000025787633,0.0004809564,0.0002824339],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0067589986,0.00020167156,0.0039813733,0.000030726693,0.00018416469,0.0000051640404,0.0011183745,0.00010068115,0.25661168,0.00013245687,0.7268471,0.0040275934],"study_design_scores_gemma":[0.006315234,0.0026316813,0.004616061,0.00008465323,0.00014167016,0.00011703665,0.0010731203,0.00016176944,0.4083986,0.0009723121,0.57529014,0.00019772539],"about_ca_topic_score_codex":0.000003979148,"about_ca_topic_score_gemma":6.8684636e-7,"teacher_disagreement_score":0.15178694,"about_ca_system_score_codex":0.00004830625,"about_ca_system_score_gemma":0.00047165176,"threshold_uncertainty_score":0.42484128},"labels":[],"label_agreement":null},{"id":"W1963853457","doi":"10.1172/jci75247","title":"Proteasome function is required for platelet production","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":73,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Heart, Lung, and Blood Institute; Canadian Institutes of Health Research; National Institutes of Health; Volkswagen Foundation; National Institute of General Medical Sciences; American Heart Association","keywords":"Platelet; Function (biology); Production (economics); Proteasome; Chemistry; Computational biology; Biology; Cell biology; Medicine; Internal medicine","score_opus":0.07441451484805864,"score_gpt":0.3446982882155616,"score_spread":0.270283773367503,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1963853457","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9806925,0.00008976419,0.015157725,0.0023246694,0.0011902809,0.00036021566,0.000003774765,0.000007359552,0.00017370946],"genre_scores_gemma":[0.986498,0.000050334344,0.00678426,0.0014425872,0.0046452526,0.000021577735,0.000033393197,0.000017230212,0.00050736096],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99850035,0.0001928405,0.00082410016,0.00019505878,0.00016888941,0.00011874161],"domain_scores_gemma":[0.99842227,0.000057724923,0.00079670287,0.00017074644,0.00042123656,0.0001312999],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026370708,0.000093465096,0.00021252867,0.00004242523,0.00006475457,0.000021861648,0.000103352,0.00021106603,0.000009719953],"category_scores_gemma":[0.003637247,0.0000787659,0.00019791712,0.000062434425,0.0000923353,0.000019153898,0.000017333528,0.00015751201,0.000007137653],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017565985,0.00014788496,0.008262641,0.00012255626,0.00015780682,5.292087e-7,0.00009774114,0.0001075558,0.8604576,0.00083705055,0.04279583,0.085256234],"study_design_scores_gemma":[0.0015094597,0.0035397466,0.0062265005,0.00007774104,0.000055132332,0.000029430172,0.000018753592,0.00037700695,0.7718551,0.01827504,0.19787623,0.00015984553],"about_ca_topic_score_codex":8.0328715e-7,"about_ca_topic_score_gemma":0.0000011117799,"teacher_disagreement_score":0.15508041,"about_ca_system_score_codex":0.000007531232,"about_ca_system_score_gemma":0.00011937005,"threshold_uncertainty_score":0.43543872},"labels":[],"label_agreement":null},{"id":"W1964631459","doi":"10.1172/jci120018","title":"The good, the bad, the mad cow","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Prion Diseases and Protein Misfolding","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Biology","score_opus":0.0410962044553091,"score_gpt":0.36168449284146836,"score_spread":0.32058828838615927,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1964631459","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9330372,0.009021228,0.0004407544,0.0565228,0.00047241253,0.00014608917,0.0000021593733,0.00000273304,0.000354618],"genre_scores_gemma":[0.98792726,0.003898443,0.00039087862,0.004778827,0.0026658576,0.0000037166067,0.0000025441275,0.000007251301,0.00032524447],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99863714,0.00034940348,0.0006232152,0.00008254139,0.0001990774,0.00010862373],"domain_scores_gemma":[0.9986369,0.00034148557,0.0005285856,0.0002484296,0.00014666044,0.000097920594],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0027192158,0.00006637495,0.0000955927,0.0000067353835,0.00025485756,0.000070881404,0.00038876422,0.00008454411,0.000014014574],"category_scores_gemma":[0.0018623215,0.000027388845,0.00021907005,0.000052794887,0.00027356128,0.0000077088225,0.000058880192,0.00026756947,0.00001072091],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052105775,0.00010752863,0.041699026,0.000009757976,0.00035052712,0.0000037485952,0.00013655836,0.0011060452,0.03789079,0.0049519753,0.11096981,0.8022532],"study_design_scores_gemma":[0.00050330395,0.0002418625,0.042403277,0.00002340939,0.000056950244,0.00002698099,0.00008074377,0.0004409751,0.010151948,0.0040832874,0.9419133,0.000073926225],"about_ca_topic_score_codex":0.0000022005577,"about_ca_topic_score_gemma":0.000017656852,"teacher_disagreement_score":0.8309435,"about_ca_system_score_codex":0.000005997426,"about_ca_system_score_gemma":0.00015252156,"threshold_uncertainty_score":0.22295074},"labels":[],"label_agreement":null},{"id":"W1964768186","doi":"10.1172/jci75181","title":"Netrin-1 controls sympathetic arterial innervation","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Axon Guidance and Neuronal Signaling","field":"Neuroscience","cited_by":97,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"Fondation de France; Killam Trusts; Institut National de la Santé et de la Recherche Médicale; Fondation Leducq; Agence Nationale de la Recherche","keywords":"Netrin; Sympathetic nervous system; Vasoconstriction; Biology; Artery; Sympathetic innervation; Medicine; Anatomy; Endocrinology; Internal medicine; Axon guidance; Axon; Blood pressure","score_opus":0.13700394126108983,"score_gpt":0.3699917334903225,"score_spread":0.23298779222923266,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1964768186","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99123144,0.000012086313,0.004708161,0.0021111285,0.0014248762,0.00008393654,8.220868e-7,0.00001691381,0.00041061302],"genre_scores_gemma":[0.9915659,0.000033377444,0.0004761662,0.0059323194,0.0019339273,0.0000014189118,5.7874985e-7,0.000010668621,0.00004567804],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970741,0.0006868871,0.0014792315,0.0001713051,0.00044368947,0.00014477455],"domain_scores_gemma":[0.9962564,0.0019166257,0.0013506933,0.00012678101,0.00015635103,0.00019313394],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0022370166,0.00009628671,0.0003375696,0.00008448146,0.00007559074,0.000057915346,0.0002087584,0.000102170656,0.000029015326],"category_scores_gemma":[0.011830824,0.00007634947,0.00017648078,0.00018455814,0.00016871486,0.00041092696,0.000019530567,0.00036450388,0.0000462919],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002644845,0.00011972081,0.008916356,0.000012635334,0.000008516959,0.000013395241,0.00009011248,0.0006041885,0.950087,0.013151955,0.0010315328,0.025700089],"study_design_scores_gemma":[0.008217037,0.0038797292,0.07920137,0.00037389016,0.0001337152,0.00015979781,0.000027733851,0.028242959,0.71216017,0.119521745,0.047575973,0.0005059093],"about_ca_topic_score_codex":0.0000013217198,"about_ca_topic_score_gemma":4.332846e-7,"teacher_disagreement_score":0.23792687,"about_ca_system_score_codex":0.000014960216,"about_ca_system_score_gemma":0.00009376069,"threshold_uncertainty_score":0.9964929},"labels":[],"label_agreement":null},{"id":"W1964899619","doi":"10.1172/jci61345","title":"Plasmacytoid dendritic cells lead the charge against tumors","year":2012,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Immunotherapy and Immune Responses","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; York University; NYU Langone Medical Center; Melanoma Research Alliance","keywords":"Imiquimod; TLR7; Immune system; Cancer research; Immunology; Melanoma; Agonist; Plasmacytoid dendritic cell; Dendritic cell; Medicine; Biology; Receptor; Innate immune system; Toll-like receptor; Internal medicine","score_opus":0.0636077687916409,"score_gpt":0.32194436345662103,"score_spread":0.25833659466498016,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1964899619","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5164079,0.02691287,0.000059469516,0.43202326,0.023308164,0.00055725826,0.000057309153,0.000052614938,0.0006211424],"genre_scores_gemma":[0.090223275,0.004118588,0.00018363218,0.8687596,0.010676018,0.00001702462,0.00029578197,0.00013791825,0.02558818],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9939968,0.0022553077,0.0027893393,0.00023067534,0.0001843202,0.0005435758],"domain_scores_gemma":[0.99227494,0.003852528,0.00301738,0.0004812068,0.00032954122,0.000044394354],"candidate_categories":["research_integrity","insufficient_payload"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.0036414305,0.00038282407,0.0011216295,0.00020786702,0.0002681059,0.000051669518,0.00084828,0.0017350715,0.00048005412],"category_scores_gemma":[0.0015056999,0.00024101758,0.0008667945,0.00015201238,0.0011613759,0.0002844048,0.00006769435,0.006792748,0.0013519217],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031430394,0.00007735553,0.00040093015,0.00004994866,0.00059754297,0.000057358655,0.00023809922,0.0000015419629,0.07159025,0.000028010623,0.9225842,0.0040604514],"study_design_scores_gemma":[0.0013982701,0.00041050895,0.0009706982,0.00042028917,0.00023383313,0.0003564097,0.000041653915,0.0000022561005,0.074701816,0.00023666564,0.9209469,0.00028070263],"about_ca_topic_score_codex":0.000008859285,"about_ca_topic_score_gemma":7.508765e-7,"teacher_disagreement_score":0.43673632,"about_ca_system_score_codex":0.000058898488,"about_ca_system_score_gemma":0.0005761897,"threshold_uncertainty_score":0.9995609},"labels":[],"label_agreement":null},{"id":"W1965772617","doi":"10.1172/jci10373","title":"NF-κB: pivotal mediator or innocent bystander in atherogenesis?","year":2001,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"NF-κB Signaling Pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":728,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto","funders":"National Heart, Lung, and Blood Institute","keywords":"Bystander effect; Mediator; Cancer research; Cell biology; NFKB1; NF-κB; Medicine; Inflammation; Immunology; Biology; Genetics; Transcription factor; Gene","score_opus":0.21664456780240926,"score_gpt":0.45101289171729597,"score_spread":0.2343683239148867,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1965772617","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.028311271,0.9697307,0.00021122365,0.000105828534,0.0011852125,0.00035623816,0.00002027783,0.0000070547267,0.00007219128],"genre_scores_gemma":[0.00073772355,0.99459416,0.0011323007,0.00029844264,0.0028290688,0.000012994424,0.00009733361,0.00007071784,0.00022726171],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99445814,0.000874127,0.0035185742,0.0004034841,0.00046562235,0.00028005856],"domain_scores_gemma":[0.9958469,0.00032819947,0.0028085732,0.00036205273,0.00030617727,0.00034807282],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0032208625,0.00037793373,0.0017463546,0.00020111435,0.00003362609,0.00003841558,0.00046383258,0.0010458604,0.00004769672],"category_scores_gemma":[0.0033372254,0.0002653719,0.0008284352,0.00040156557,0.0001988635,0.000012242038,0.00009776447,0.00082220027,0.000021946465],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047757314,0.0007034947,0.005394916,0.004176338,0.0009730175,0.00045085183,0.00007160969,0.000044836044,0.0013561926,0.00008711018,0.010716383,0.9755477],"study_design_scores_gemma":[0.001115825,0.00084090047,0.00008602422,0.004845471,0.00040401067,0.00030420106,0.000016171805,0.000006991645,0.00081213546,0.00019014912,0.991001,0.00037708346],"about_ca_topic_score_codex":0.0000030531844,"about_ca_topic_score_gemma":0.000026033878,"teacher_disagreement_score":0.98028463,"about_ca_system_score_codex":0.000079785,"about_ca_system_score_gemma":0.0020746232,"threshold_uncertainty_score":0.99997985},"labels":[],"label_agreement":null},{"id":"W1966555773","doi":"10.1172/jci77888","title":"Long-term potentiation decay and memory loss are mediated by AMPAR endocytosis","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Neuroscience and Neuropharmacology Research","field":"Neuroscience","cited_by":202,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute on Drug Abuse; National Institute of Mental Health; National Key Research and Development Program of China; Canadian Institutes of Health Research; National Institutes of Health; Ministry of Science and Technology of the People's Republic of China; National Natural Science Foundation of China; Fondation Brain Canada","keywords":"Long-term potentiation; AMPA receptor; Endocytosis; Neuroscience; Postsynaptic potential; Hippocampal formation; Biology; Chemistry; Cell biology; NMDA receptor; Receptor; Biochemistry","score_opus":0.12127804802204813,"score_gpt":0.4145816233990266,"score_spread":0.2933035753769785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1966555773","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99456936,0.00003996112,0.00023052776,0.004188792,0.0007864775,0.00012375788,0.0000044500043,0.000015146712,0.000041518375],"genre_scores_gemma":[0.99357074,0.000752583,0.000025805637,0.005222896,0.000307555,0.0000024974454,7.590608e-7,0.0000127550975,0.0001044042],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9964641,0.0013231493,0.0010069254,0.00032816586,0.0006360719,0.00024162854],"domain_scores_gemma":[0.99562234,0.0026234821,0.0010719172,0.00014101315,0.00016728735,0.00037393504],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0020936963,0.0001223121,0.00034425152,0.00015312409,0.00016379842,0.00008881634,0.00032352735,0.00011459573,0.000029693196],"category_scores_gemma":[0.009025122,0.00009829719,0.000104602215,0.00031561247,0.00078474643,0.0004956176,0.0000714468,0.00063568144,0.000028756342],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009245659,0.00009524935,0.17059922,0.000015169799,0.0000044488957,0.00005951104,0.000024352881,0.00000910926,0.824607,0.000035306428,0.0012955761,0.0031625968],"study_design_scores_gemma":[0.0013763473,0.00052563555,0.20099206,0.00003866685,0.000032984146,0.00013701829,0.0000043697955,0.0007416032,0.79523855,0.00048492706,0.00032309856,0.00010473497],"about_ca_topic_score_codex":0.0000010102282,"about_ca_topic_score_gemma":0.0000011086761,"teacher_disagreement_score":0.030392846,"about_ca_system_score_codex":0.000015516911,"about_ca_system_score_gemma":0.000097721844,"threshold_uncertainty_score":0.9993223},"labels":[],"label_agreement":null},{"id":"W1967214137","doi":"10.1172/jci40259","title":"Engaging the lysosomal compartment to combat B cell malignancies","year":2009,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Chronic Lymphocytic Leukemia Research","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Response Biomedical (Canada)","funders":"Medical Research Council; Novo Nordisk; H. Lundbeck A/S; Lundbeckfonden; Sundhed og Sygdom, Det Frie Forskningsråd; Danmarks Grundforskningsfond; National Research Foundation; European Commission; Novo Nordisk Fonden; Kræftens Bekæmpelse","keywords":"CD20; Rituximab; B cell; Programmed cell death; Lymphoma; Medicine; Immunology; Lysosome; Monoclonal antibody; Cancer research; Apoptosis; Antibody; Biology","score_opus":0.1314796178940679,"score_gpt":0.406458272408917,"score_spread":0.27497865451484915,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1967214137","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.22985342,0.0005266057,0.0001198622,0.76671576,0.0010871303,0.0006105783,0.000004949101,0.000019331017,0.0010623643],"genre_scores_gemma":[0.0912405,0.0001972865,0.0029515256,0.8863456,0.016189087,0.0000089398,0.00006671847,0.00005290769,0.0029474034],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99389833,0.00088206335,0.0025759235,0.00030952727,0.0018712949,0.00046285335],"domain_scores_gemma":[0.9940676,0.0026427752,0.0014652715,0.0005900624,0.00075805676,0.00047624143],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0041451305,0.0003012155,0.001224112,0.00023525931,0.00012836739,0.0001015624,0.00053115713,0.0006481863,0.000068116824],"category_scores_gemma":[0.0026121621,0.00018242342,0.00063564454,0.00029763387,0.00039740757,0.00011444159,0.00010368753,0.0048234267,0.00012129938],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015525687,0.00007868072,0.00055010227,0.00017574697,0.00012550341,0.0010507549,0.00021098452,0.00008309435,0.00022194254,0.00001856285,0.9955717,0.0017576922],"study_design_scores_gemma":[0.010359375,0.0023997538,0.0068958555,0.0018338278,0.00068019546,0.0010537241,0.000100141595,0.001308733,0.002482675,0.0013329529,0.97124285,0.00030990018],"about_ca_topic_score_codex":0.000031954274,"about_ca_topic_score_gemma":0.0000028377121,"teacher_disagreement_score":0.13861291,"about_ca_system_score_codex":0.0029134196,"about_ca_system_score_gemma":0.008872088,"threshold_uncertainty_score":0.99747247},"labels":[],"label_agreement":null},{"id":"W1967494982","doi":"10.1172/jci10564","title":"Postnatal expression in hyaline cartilage of constitutively active human collagenase-3 (MMP-13) induces osteoarthritis in mice","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Osteoarthritis Treatment and Mechanisms","field":"Medicine","cited_by":537,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Children's Hospital; McGill University; Women's Health Research Institute","funders":"Canadian Arthritis Network; Medical Research Council; National Institute on Aging; National Institutes of Health; Medical Research Council Canada; Shriners Hospitals for Children","keywords":"Collagenase; Cartilage; Osteoarthritis; Matrix metalloproteinase; Hyaline; Proteoglycan; Synovitis; Hyaline cartilage; Transgene; Pathology; Metalloproteinase; Type II collagen; MMP1; Chemistry; Cell biology; Biology; Gene expression; Medicine; Arthritis; Immunology; Internal medicine; Anatomy; Articular cartilage; Gene; Enzyme; Biochemistry","score_opus":0.06738610853385885,"score_gpt":0.3666802277330138,"score_spread":0.29929411919915494,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1967494982","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974592,0.00035494438,0.000009171444,0.00044415393,0.0003071869,0.0003832618,0.000019963238,0.000007744515,0.0010144211],"genre_scores_gemma":[0.9980067,0.00015569407,0.0012195503,0.00023233434,0.00024662918,0.0000062315908,0.000034274497,0.000013117318,0.00008546027],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970761,0.00029099412,0.0018511968,0.00019774416,0.00039341007,0.00019054918],"domain_scores_gemma":[0.99799156,0.00033572415,0.0010046911,0.00012245544,0.00030004862,0.00024550103],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010369751,0.00015633149,0.00076310924,0.000341571,0.00003824826,0.000011552605,0.00009272957,0.00025293982,0.00005178244],"category_scores_gemma":[0.0011645274,0.00013530756,0.00017772753,0.00035261927,0.00029455477,0.00039108284,0.000030370224,0.0004915348,0.0000046913237],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001761861,0.00067754457,0.08229505,0.00003789442,0.000019121468,0.0017105564,0.0008013345,0.000011938926,0.89719373,0.0001912166,0.00007507907,0.015224697],"study_design_scores_gemma":[0.018499104,0.006950237,0.20343713,0.002861946,0.00009576475,0.0004129591,0.001047883,0.00000942592,0.7650236,0.0012963064,0.00020035327,0.00016530103],"about_ca_topic_score_codex":0.00003741805,"about_ca_topic_score_gemma":0.00036325038,"teacher_disagreement_score":0.13217011,"about_ca_system_score_codex":0.000076919736,"about_ca_system_score_gemma":0.00037375625,"threshold_uncertainty_score":0.55176824},"labels":[],"label_agreement":null},{"id":"W1967814408","doi":"10.1172/jci68016","title":"Rare variants in single-minded 1 (SIM1) are associated with severe obesity","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Regulation of Appetite and Obesity","field":"Neuroscience","cited_by":168,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Ottawa; Medical Research Council; National Institute for Health and Care Research; NIHR Cambridge Biomedical Research Centre; Australian Research Council; Wellcome Trust; National Heart, Lung, and Blood Institute; McGill University","keywords":"Endocrinology; Biology; Internal medicine; Penetrance; Phenotype; Melanocortin 4 receptor; Proband; Obesity; Transcription factor; Melanocortin; Genetics; Gene; Mutation; Medicine; Hormone","score_opus":0.1018626256976997,"score_gpt":0.32208196175931886,"score_spread":0.22021933606161914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1967814408","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967286,0.0000063614434,0.00009886271,0.0022397307,0.00024355183,0.0001756722,0.0000021579742,0.000016429383,0.0004886388],"genre_scores_gemma":[0.9974071,0.000011125567,0.0005731633,0.0015387904,0.00017464213,0.0000015643399,0.000001947796,0.000010769443,0.0002809113],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99731034,0.00060025323,0.001161791,0.00021516538,0.0005322465,0.0001801845],"domain_scores_gemma":[0.9964706,0.0011313149,0.0016612617,0.00015683402,0.0003337462,0.0002462476],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0011237417,0.00012266265,0.00040968985,0.000118337884,0.00007231136,0.0000922388,0.00022160455,0.00019609724,0.0001036614],"category_scores_gemma":[0.008618785,0.00009255767,0.00010629004,0.00038903818,0.0001997347,0.00092648336,0.000029999741,0.0005141828,0.000044927026],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009067968,0.00050522934,0.9793588,0.000011522907,0.000012633798,0.000069089336,0.00012767364,0.00044788493,0.016395407,0.00031914515,0.0011979244,0.0014639929],"study_design_scores_gemma":[0.0014214013,0.0003370328,0.9710689,0.00032722863,0.000014725358,0.000028718685,0.000028293343,0.0010517854,0.016869377,0.008639023,0.00009306909,0.0001204164],"about_ca_topic_score_codex":0.00000983106,"about_ca_topic_score_gemma":0.000046298377,"teacher_disagreement_score":0.008319878,"about_ca_system_score_codex":0.00006518484,"about_ca_system_score_gemma":0.00015849122,"threshold_uncertainty_score":0.999732},"labels":[],"label_agreement":null},{"id":"W1967914509","doi":"10.1172/jci18234","title":"Heparan sulfate: Antithrombotic or not?","year":2003,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Heparin-Induced Thrombocytopenia and Thrombosis","field":"Medicine","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hamilton Health Sciences","funders":"McMaster University; Heart and Stroke Foundation of Canada","keywords":"Heparan sulfate; Antithrombotic; Chemistry; Heparin; Sulfate; Cell biology; Biochemistry; Medicine; Biology; Internal medicine","score_opus":0.4336635917477718,"score_gpt":0.5189502674382912,"score_spread":0.0852866756905194,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1967914509","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.009576646,0.98284125,0.000064139036,0.0007062579,0.0041142805,0.0011847183,0.000014226842,0.000045912264,0.0014525626],"genre_scores_gemma":[0.0007518418,0.99172306,0.0037854312,0.00093318406,0.0017146575,0.000008012952,0.000037846745,0.000105308616,0.00094063376],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99122375,0.001157674,0.0059558223,0.00046972334,0.00079190265,0.000401139],"domain_scores_gemma":[0.9919552,0.0014775237,0.004340773,0.0006185072,0.0005980227,0.0010099724],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0039554695,0.00057281565,0.006946448,0.00042176957,0.000093908384,0.000081666214,0.0003690252,0.0012096558,0.00043476818],"category_scores_gemma":[0.005330413,0.0003584262,0.0021166913,0.00077821926,0.00041685294,0.00032523472,0.000056336972,0.0024743588,0.00035030767],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044384116,0.0008972433,0.0017155688,0.019991871,0.0033411717,0.0008157258,0.000071843155,0.0000012979322,0.00004159681,0.0009532759,0.009832592,0.961894],"study_design_scores_gemma":[0.0019524326,0.0016690319,0.0026252125,0.026593957,0.0075855814,0.0019062872,0.000011563646,0.000007881865,0.000037788035,0.00024800203,0.9569412,0.00042109378],"about_ca_topic_score_codex":0.00000819169,"about_ca_topic_score_gemma":0.000005480443,"teacher_disagreement_score":0.96147287,"about_ca_system_score_codex":0.00019775487,"about_ca_system_score_gemma":0.004497377,"threshold_uncertainty_score":0.99988675},"labels":[],"label_agreement":null},{"id":"W1968091682","doi":"10.1172/jci58227","title":"Decreased cardiac L-type Ca2+ channel activity induces hypertrophy and heart failure in mice","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Ion channel regulation and function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":165,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; Cincinnati Children's Hospital Medical Center; National Heart, Lung, and Blood Institute; Heart and Stroke Foundation of Canada; American Heart Association; Howard Hughes Medical Institute","keywords":"Heart failure; Muscle hypertrophy; Internal medicine; Endocrinology; Calcineurin; Contractility; Pressure overload; Stimulation; Medicine; Cardiac function curve; Voltage-dependent calcium channel; Endoplasmic reticulum; Biology; Calcium; Cardiac hypertrophy; Cell biology; Transplantation","score_opus":0.0745738239697274,"score_gpt":0.3171909568913408,"score_spread":0.2426171329216134,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1968091682","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99830353,0.000120085584,0.00015946598,0.0005159167,0.0007665122,0.00006700972,0.0000012080816,0.00000267958,0.0000636022],"genre_scores_gemma":[0.9976132,0.00010530698,0.001160232,0.00035186135,0.00071728695,0.0000011903143,0.000007810792,0.000007641177,0.000035471716],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99900836,0.00022339718,0.00043151944,0.00013596374,0.00011479486,0.00008597929],"domain_scores_gemma":[0.9992489,0.000042796753,0.0002899614,0.00007583068,0.00019497529,0.00014753653],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007820182,0.00007948337,0.00020876856,0.00006654584,0.00002960943,0.0000110573665,0.00004971592,0.00020968521,0.0000066674506],"category_scores_gemma":[0.0007574071,0.000067868794,0.000090624526,0.000098584635,0.000096799864,0.000022095639,0.000020222926,0.00018724019,0.000002035995],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012181102,0.00022700586,0.15604775,0.000026976964,0.000097728145,0.000004384557,0.0003102416,0.00008320988,0.8338327,0.0000655554,0.004550013,0.0035363361],"study_design_scores_gemma":[0.001443349,0.0013734985,0.7474944,0.000061405735,0.000044795986,0.000029907706,0.00017074098,0.0005829506,0.2429304,0.0012068012,0.004463129,0.00019863946],"about_ca_topic_score_codex":0.000030346984,"about_ca_topic_score_gemma":0.000014323796,"teacher_disagreement_score":0.59144664,"about_ca_system_score_codex":0.0000075990692,"about_ca_system_score_gemma":0.0001192237,"threshold_uncertainty_score":0.2767609},"labels":[],"label_agreement":null},{"id":"W1968904120","doi":"10.1172/jci46465","title":"The intersection of genetic and chemical genomic screens identifies GSK-3α as a target in human acute myeloid leukemia","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":104,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Terry Fox Foundation; Howard Hughes Medical Institute; University of Manitoba; National Cancer Institute; CancerCare Manitoba Foundation; American Cancer Society; Broad Institute; Boston Foundation","keywords":"Myeloid leukemia; GSK-3; Biology; Leukemia; Cancer research; Small hairpin RNA; Myeloid; Cell growth; Signal transduction; Cell cycle; Cell biology; Cancer; Apoptosis; Genetics; Gene knockdown","score_opus":0.021440843138178987,"score_gpt":0.31475616345654023,"score_spread":0.2933153203183612,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1968904120","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987176,0.00044476043,0.00032015482,0.00012367066,0.00025598623,0.00006819576,0.0000023851112,0.000001215215,0.00006603939],"genre_scores_gemma":[0.9964388,0.00032678177,0.0026678478,0.000083523184,0.00041371287,0.0000016086902,0.000011010309,0.000010348234,0.000046348145],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985826,0.0001141616,0.000955393,0.000102455044,0.000112123096,0.00013326203],"domain_scores_gemma":[0.99892366,0.000060712344,0.0006688146,0.00013196538,0.00010079746,0.000114056274],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001064872,0.000085913634,0.00020042666,0.000031677027,0.000047437723,0.000023430503,0.00014182816,0.0001574685,0.0000029143066],"category_scores_gemma":[0.00034624958,0.0000666257,0.00011116891,0.00004629703,0.00025018296,0.000012298685,0.00007911813,0.00020556946,0.0000010070326],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007405754,0.000028539416,0.08932029,0.000011002222,0.000078476005,0.0000011384041,0.00013136063,0.00007574633,0.909066,0.00017367661,0.00018238158,0.0008573302],"study_design_scores_gemma":[0.001415274,0.00062994316,0.7743073,0.00007299143,0.000118278935,0.0002207485,0.00040428646,0.0014468853,0.21037138,0.010148561,0.0006626669,0.00020170635],"about_ca_topic_score_codex":0.000017667273,"about_ca_topic_score_gemma":0.000016138434,"teacher_disagreement_score":0.69869465,"about_ca_system_score_codex":0.000035671113,"about_ca_system_score_gemma":0.00012447231,"threshold_uncertainty_score":0.2716917},"labels":[],"label_agreement":null},{"id":"W1970410298","doi":"10.1172/jci65509","title":"Turning a blind eye to anti-VEGF toxicities","year":2012,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Retinal Diseases and Treatments","field":"Medicine","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital","funders":"Canadian Institutes of Health Research; National Institutes of Health; University of Toronto","keywords":"Macular degeneration; Medicine; Ophthalmology; Retinal; Diabetic retinopathy; Macular edema; Central retinal vein occlusion; Choroid; Retina; Retinal Vein; Branch retinal vein occlusion; Vascular endothelial growth factor A; VEGF receptors; Vascular endothelial growth factor; Neuroscience; Biology; Diabetes mellitus; Internal medicine; Endocrinology","score_opus":0.13855372972269991,"score_gpt":0.43069696831398324,"score_spread":0.2921432385912833,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1970410298","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6254765,0.00057142915,0.000057250894,0.371725,0.0013435109,0.0002613753,0.000013307889,0.00001340366,0.0005382284],"genre_scores_gemma":[0.2407841,0.00026130417,0.0044134837,0.72098035,0.030016609,0.0000075592234,0.00015835752,0.000076340046,0.0033018922],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99647003,0.0002600522,0.0019198178,0.00021439804,0.0008360863,0.0002996312],"domain_scores_gemma":[0.99645966,0.00051875407,0.0016135417,0.0002528225,0.00048361602,0.00067158794],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009119406,0.000266894,0.001136653,0.00026865976,0.000050858678,0.00005731573,0.00014811225,0.00068959506,0.00016098957],"category_scores_gemma":[0.0023280736,0.0001902658,0.00076038984,0.00016468951,0.00014733698,0.00019847944,0.000039411952,0.002092108,0.00014698492],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004335471,0.00018585379,0.19281244,0.00030120512,0.0006227297,0.0010450287,0.00014182464,0.0000055835458,0.00014454786,0.000013243487,0.8012049,0.0030891064],"study_design_scores_gemma":[0.003739999,0.0025575084,0.4848209,0.0033994652,0.0027439736,0.00029668637,0.000052603118,0.000025890655,0.00026804087,0.0012290728,0.5005132,0.0003526524],"about_ca_topic_score_codex":0.0000075324956,"about_ca_topic_score_gemma":3.4134294e-7,"teacher_disagreement_score":0.3846924,"about_ca_system_score_codex":0.00008011716,"about_ca_system_score_gemma":0.0004487531,"threshold_uncertainty_score":0.90892845},"labels":[],"label_agreement":null},{"id":"W1971308765","doi":"10.1172/jci57158","title":"Therapeutic strategies for the clinical blockade of IL-6/gp130 signaling","year":2011,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Cytokine Signaling Pathways and Interactions","field":"Medicine","cited_by":680,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Versus Arthritis; Exzellenzclusters Entzündungsforschung; Deutsche Forschungsgemeinschaft; Wellcome Trust","keywords":"Glycoprotein 130; Blockade; Tocilizumab; Autoimmunity; Immunology; Medicine; Regulator; Inflammation; Receptor; Disease; Cytokine; Interleukin-6 receptor; Antibody; Interleukin 6; Biology; Internal medicine; Rheumatoid arthritis","score_opus":0.4989451167644811,"score_gpt":0.5224018989622837,"score_spread":0.023456782197802617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1971308765","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0008845735,0.9908131,0.0037664757,0.0004359915,0.0028986207,0.00096176896,0.000032316646,0.000015425148,0.00019174856],"genre_scores_gemma":[0.0026435142,0.9888554,0.0030649055,0.0003503102,0.004893561,0.0000217597,0.000018997653,0.000056334087,0.000095175346],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9922951,0.0006183174,0.0062670032,0.00025277707,0.0003724493,0.00019435608],"domain_scores_gemma":[0.9831241,0.008641871,0.006489437,0.00041697896,0.0010604424,0.00026720454],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0060811043,0.00030830575,0.0029844537,0.00018869141,0.00008752221,0.00004531631,0.00036384392,0.00060023175,0.00010088797],"category_scores_gemma":[0.0036074796,0.00016669733,0.0033688878,0.00024098897,0.00049737125,0.00017335392,0.00003392275,0.0018749058,0.000009121309],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028586836,0.0003483884,0.00019478897,0.0040777707,0.002242027,0.000007493976,0.00011460558,0.00001307696,0.00007204196,0.0022303534,0.0024457753,0.9879678],"study_design_scores_gemma":[0.0010586691,0.0026579679,0.00015984474,0.015363195,0.008779189,0.00018454464,0.00012605543,0.0001149706,0.00010730495,0.004848795,0.96642625,0.0001732385],"about_ca_topic_score_codex":0.000007959757,"about_ca_topic_score_gemma":0.0000022019249,"teacher_disagreement_score":0.9877946,"about_ca_system_score_codex":0.0000348037,"about_ca_system_score_gemma":0.002875028,"threshold_uncertainty_score":0.8145637},"labels":[],"label_agreement":null},{"id":"W1972066347","doi":"10.1172/jci39387","title":"Tregs control the development of symptomatic West Nile virus infection in humans and mice","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":217,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"U.S. Public Health Service; National Institute of Allergy and Infectious Diseases; Centers for Disease Control and Prevention","keywords":"Asymptomatic; Immunology; Encephalitis; Disease; West Nile virus; Virology; Medicine; Viral encephalitis; Virus; Biology; Internal medicine","score_opus":0.04275139605037645,"score_gpt":0.36376327152685467,"score_spread":0.32101187547647825,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1972066347","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963137,0.0003148739,0.00047370026,0.0024504887,0.00010936346,0.00020222386,7.981886e-7,0.0000044993103,0.00013038144],"genre_scores_gemma":[0.9979681,0.00010618219,0.0004492064,0.0012298897,0.00021938795,0.0000027408207,0.0000017953984,0.0000041569365,0.000018554456],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980369,0.00015845383,0.0013996604,0.00008455204,0.00023407086,0.00008634233],"domain_scores_gemma":[0.99850744,0.00035145244,0.0007507904,0.00009075784,0.00016091418,0.00013862297],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014522128,0.000076239194,0.00039568605,0.000079377685,0.00003751452,0.000013675457,0.000049109232,0.00007580526,0.00001915218],"category_scores_gemma":[0.0009924069,0.000048047175,0.00011321621,0.00010648944,0.000088021705,0.000109414264,0.0000051890943,0.00023854744,0.0000021787528],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007048932,0.0005542103,0.9273004,0.00008994676,0.00012729045,0.000010169623,0.0009386081,0.00008882906,0.00809189,0.0003674425,0.00031510476,0.06141121],"study_design_scores_gemma":[0.0036786182,0.0006257525,0.9918303,0.00031777789,0.00018230552,0.000010713999,0.0000646275,0.001292249,0.00052634487,0.0012489522,0.0001771103,0.000045283727],"about_ca_topic_score_codex":0.000019887606,"about_ca_topic_score_gemma":0.00010878373,"teacher_disagreement_score":0.06452986,"about_ca_system_score_codex":0.000026457445,"about_ca_system_score_gemma":0.00025188882,"threshold_uncertainty_score":0.1959307},"labels":[],"label_agreement":null},{"id":"W1972078981","doi":"10.1172/jci12348","title":"Insulin-induced cortical actin remodeling promotes GLUT4 insertion at muscle cell membrane ruffles","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":188,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"Canadian Institutes of Health Research; Hospital for Sick Children","keywords":"GLUT4; Membrane ruffling; Cell biology; Actin remodeling; Glucose transporter; Biology; Glucose uptake; Actin; Cell membrane; Actin cytoskeleton; Insulin; Cytoskeleton; Cell; Endocrinology; Biochemistry","score_opus":0.06725942748888296,"score_gpt":0.3216743892972904,"score_spread":0.25441496180840745,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1972078981","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940445,0.00021217938,0.0043252567,0.0006659348,0.00040821853,0.0001172092,0.0000013536969,0.000009230682,0.00021615338],"genre_scores_gemma":[0.9959756,0.00077087805,0.0016434672,0.00032373052,0.00089963264,0.0000014450442,0.00022890038,0.000019641962,0.00013668656],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978488,0.00021762591,0.0012418962,0.00022814558,0.00029286376,0.00017065693],"domain_scores_gemma":[0.9985515,0.000072906674,0.0006575856,0.00018557615,0.0002880684,0.00024438693],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001355102,0.00013761761,0.00028226594,0.000055742225,0.00009931843,0.000023445828,0.00013710394,0.00034342406,0.000034008728],"category_scores_gemma":[0.0007171611,0.00012113635,0.00025424495,0.0001091699,0.0000913757,0.000024936864,0.000028859122,0.00037685907,0.000010705844],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005272907,0.0001285888,0.018708196,0.0000180464,0.000021130276,0.000010867932,0.000055477063,0.00012435012,0.9781636,0.000009903921,0.000039947023,0.0021926293],"study_design_scores_gemma":[0.0027092653,0.0017751667,0.14231552,0.000116348456,0.00014872005,0.00009878978,0.000082954255,0.004852373,0.8347622,0.0006254271,0.01219222,0.0003209755],"about_ca_topic_score_codex":0.000010339131,"about_ca_topic_score_gemma":0.00003600689,"teacher_disagreement_score":0.14340134,"about_ca_system_score_codex":0.00002360619,"about_ca_system_score_gemma":0.00015856458,"threshold_uncertainty_score":0.4939797},"labels":[],"label_agreement":null},{"id":"W1972097313","doi":"10.1172/jci59725","title":"Langerhans cells protect from allergic contact dermatitis in mice by tolerizing CD8+ T cells and activating Foxp3+ regulatory T cells","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Contact Dermatitis and Allergies","field":"Medicine","cited_by":167,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Fondation pour la Recherche Médicale; Institut National de la Santé et de la Recherche Médicale","keywords":"Immunology; FOXP3; CD8; Adoptive cell transfer; Allergic contact dermatitis; Cytotoxic T cell; Immune tolerance; Sensitization; Immune system; T cell; Population; Langerhans cell; Contact dermatitis; Biology; Allergy; Medicine; Biochemistry","score_opus":0.044293045183474836,"score_gpt":0.3119760351722051,"score_spread":0.2676829899887303,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1972097313","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956719,0.0010575934,0.00018335487,0.0019112891,0.0006135297,0.00030026436,0.000013699417,0.00001643361,0.00023188644],"genre_scores_gemma":[0.99174803,0.0005372403,0.0048565688,0.0020255437,0.0007276263,0.000005210781,0.000011531011,0.000021750262,0.00006647232],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973023,0.00030791076,0.0015753001,0.00016700973,0.00037953747,0.00026797457],"domain_scores_gemma":[0.9973437,0.0008687053,0.0011243973,0.00013588557,0.00012274605,0.00040452628],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012050939,0.00018678965,0.0007074411,0.000113933565,0.00005645234,0.00005294854,0.00009486803,0.0002235178,0.0000675481],"category_scores_gemma":[0.00037702243,0.00015900942,0.00015879559,0.000116933625,0.00008957857,0.0006749578,0.000038972732,0.0007021274,0.00001055313],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008135816,0.0001666218,0.040488083,0.000116766954,0.00011035888,0.000037154594,0.0015173783,0.000015177528,0.94064957,0.000020541482,0.008927445,0.007869546],"study_design_scores_gemma":[0.003623339,0.00038355787,0.31810376,0.0016504739,0.00010500027,0.0000525428,0.00068335154,0.00087101397,0.66057074,0.00026295814,0.013406761,0.00028652168],"about_ca_topic_score_codex":0.00017177105,"about_ca_topic_score_gemma":0.000033472123,"teacher_disagreement_score":0.28007883,"about_ca_system_score_codex":0.00006945625,"about_ca_system_score_gemma":0.00013822567,"threshold_uncertainty_score":0.6484216},"labels":[],"label_agreement":null},{"id":"W1973159660","doi":"10.1172/jci63711","title":"Smap1 deficiency perturbs receptor trafficking and predisposes mice to myelodysplasia","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Aging","funders":"","keywords":"Endocytosis; Clathrin; Cell biology; Biology; Transferrin receptor; Internalization; GTPase; Receptor; Biochemistry","score_opus":0.029027398486931578,"score_gpt":0.2953151763103939,"score_spread":0.2662877778234623,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1973159660","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99370587,0.00028816296,0.003929906,0.001412663,0.00044277412,0.00012266556,0.0000016408378,0.0000039323872,0.00009235969],"genre_scores_gemma":[0.99402636,0.000224776,0.0041796695,0.00058544375,0.00075425213,0.000002453955,0.00007059414,0.000009575198,0.00014688574],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99882853,0.000084046485,0.0006737486,0.00015519433,0.00015013765,0.00010831727],"domain_scores_gemma":[0.99914914,0.000051339284,0.00026509224,0.00008668985,0.00021747114,0.00023026916],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006464286,0.000086599066,0.00017290338,0.000042946973,0.000045950124,0.000035019202,0.00009787101,0.00015195295,0.000025681504],"category_scores_gemma":[0.000601432,0.00007124014,0.000099531826,0.00006670398,0.00008886966,0.000018309098,0.000015707836,0.00015214324,0.000011621593],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000077017845,0.000043671338,0.033331245,0.00001787035,0.000019844807,0.0000011273818,0.0001804476,0.00005808829,0.95778424,0.0000666662,0.0014774787,0.00694229],"study_design_scores_gemma":[0.0018046714,0.0031600518,0.7681818,0.0002254076,0.00012829067,0.000084828716,0.00036799427,0.000665228,0.15883009,0.0006757617,0.06541385,0.00046202735],"about_ca_topic_score_codex":0.0000066784773,"about_ca_topic_score_gemma":0.000008129256,"teacher_disagreement_score":0.7989541,"about_ca_system_score_codex":0.000005420856,"about_ca_system_score_gemma":0.000079281526,"threshold_uncertainty_score":0.29050887},"labels":[],"label_agreement":null},{"id":"W1973171955","doi":"10.1172/jci63679","title":"Calcium oxalate crystals induce renal inflammation by NLRP3-mediated IL-1β secretion","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Kidney Stones and Urolithiasis Treatments","field":"Medicine","cited_by":459,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Institute of Infection and Immunity","funders":"National Institute on Deafness and Other Communication Disorders; Deutsche Forschungsgemeinschaft","keywords":"Inflammation; Nephrocalcinosis; Calcium oxalate; Kidney; Secretion; Nephropathy; Diabetic nephropathy; Medicine; Endocrinology; Internal medicine; Immunology; Calcium; Diabetes mellitus","score_opus":0.08804786696183649,"score_gpt":0.3824316605644724,"score_spread":0.29438379360263595,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1973171955","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9912076,0.00024415902,0.00056780496,0.006576524,0.0008061191,0.00022828282,0.00001639316,0.000025910493,0.00032719102],"genre_scores_gemma":[0.9943224,0.00015636883,0.0015299466,0.0014082178,0.0020427725,0.000004542442,0.0001923139,0.000023709948,0.00031968756],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9967243,0.00033226862,0.0018931695,0.00014809876,0.0006327972,0.0002693499],"domain_scores_gemma":[0.9964782,0.00037862943,0.001576167,0.00018009746,0.0004542902,0.0009326298],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024977399,0.0001751733,0.0005624646,0.00014239796,0.00006866977,0.000028002658,0.0000785586,0.00035069612,0.000086627624],"category_scores_gemma":[0.0037358243,0.00013197618,0.00025821282,0.00023278414,0.00013860968,0.00071618747,0.000022082042,0.0006042573,0.00006457694],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00071994716,0.00053881446,0.78219414,0.00007279323,0.00038033846,0.000018075883,0.00053113356,0.000011933265,0.18728305,0.00019058355,0.019555014,0.008504188],"study_design_scores_gemma":[0.005618052,0.0012941286,0.916992,0.00037296885,0.0006366884,0.00021273526,0.0000840252,0.00062583917,0.030998038,0.00080493756,0.0421423,0.00021826391],"about_ca_topic_score_codex":0.000013638145,"about_ca_topic_score_gemma":3.8435022e-7,"teacher_disagreement_score":0.15628502,"about_ca_system_score_codex":0.00010539269,"about_ca_system_score_gemma":0.00027980126,"threshold_uncertainty_score":0.5381833},"labels":[],"label_agreement":null},{"id":"W1973489602","doi":"10.1172/jci30076","title":"The role of gut hormones in glucose homeostasis","year":2007,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":612,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Diabetes Canada; University of Toronto","funders":"National Cancer Institute; Canadian Institutes of Health Research; University of Toronto; Canadian Diabetes Association","keywords":"Enteroendocrine cell; Glucose homeostasis; Hormone; Energy homeostasis; Gastrointestinal tract; Homeostasis; Biology; Endocrine system; Assimilation (phonology); Motility; Gut flora; Endocrinology; Pancreas; Internal medicine; Diabetes mellitus; Insulin resistance; Cell biology; Medicine; Immunology; Obesity; Biochemistry","score_opus":0.15915421104129526,"score_gpt":0.44475498519862605,"score_spread":0.28560077415733076,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1973489602","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008473711,0.9897455,0.0000065221034,0.00020491447,0.00047587988,0.00024229466,0.0000029387336,0.0000046605883,0.00084358],"genre_scores_gemma":[0.0006612942,0.9977225,0.0006324029,0.00015950948,0.00070066395,0.0000033236745,0.000010351416,0.000017368451,0.00009258366],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99521214,0.00038585928,0.0036640016,0.00012164484,0.00046453346,0.00015184282],"domain_scores_gemma":[0.99223983,0.004031533,0.0029047804,0.0002372262,0.00033640073,0.00025022583],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.004974011,0.00017115938,0.0020462442,0.00028498203,0.000029210765,0.0000149596835,0.00014961362,0.00038372172,0.000018771196],"category_scores_gemma":[0.00964714,0.00009263435,0.0007972202,0.0004387969,0.00028598824,0.00007973462,0.00002300282,0.0008935332,0.000015707448],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000807222,0.00008638469,0.002001732,0.0009938987,0.00016161393,0.000009808361,0.000018107046,2.96003e-7,0.000008492399,0.000164517,0.00064354285,0.9958309],"study_design_scores_gemma":[0.0007944714,0.0005311667,0.003787469,0.01080163,0.0010405526,0.00005516203,0.00006825378,0.000016979217,0.000078772864,0.0019018298,0.9808366,0.00008713751],"about_ca_topic_score_codex":0.0000068035692,"about_ca_topic_score_gemma":0.0000023392472,"teacher_disagreement_score":0.99574375,"about_ca_system_score_codex":0.000059633487,"about_ca_system_score_gemma":0.00087290077,"threshold_uncertainty_score":0.998695},"labels":[],"label_agreement":null},{"id":"W1973693466","doi":"10.1172/jci66168","title":"iRHOM2 is a critical pathogenic mediator of inflammatory arthritis","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cytokine Signaling Pathways and Interactions","field":"Medicine","cited_by":168,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Dental and Craniofacial Research; National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute of General Medical Sciences; National Institutes of Health; National Cancer Institute; U.S. Public Health Service; Deutsche Forschungsgemeinschaft; Alexander von Humboldt-Stiftung","keywords":"Mediator; Arthritis; Inflammatory mediator; Inflammation; Medicine; Immunology; Internal medicine","score_opus":0.06947756794983849,"score_gpt":0.3834276023807282,"score_spread":0.3139500344308897,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1973693466","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99110997,0.00035121263,0.00024787153,0.007032706,0.00068452716,0.00013201895,0.000006624115,0.000010588264,0.0004244998],"genre_scores_gemma":[0.99240816,0.00025380802,0.0043381415,0.0017571057,0.0011776413,0.0000046156733,0.000003399991,0.000014072279,0.00004303859],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99706966,0.0001398165,0.0021148184,0.00011745145,0.00042930924,0.00012893503],"domain_scores_gemma":[0.9964581,0.0009323439,0.0008261644,0.00017322582,0.0011710107,0.00043914834],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010071783,0.00009864472,0.00054678303,0.00013676642,0.000031725973,0.00001940237,0.000080603735,0.00016528222,0.00097633863],"category_scores_gemma":[0.007792523,0.00007787021,0.000424013,0.00012756922,0.00030335918,0.0003385931,0.000019439392,0.00056216225,0.00008028906],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033438765,0.00088206824,0.29867426,0.00030121562,0.0003792031,0.000121807825,0.0008516341,0.000009624084,0.55630875,0.0030448253,0.09401158,0.045080632],"study_design_scores_gemma":[0.0065143635,0.005566062,0.7279804,0.0035444445,0.0005985982,0.001079207,0.00073841773,0.0019512052,0.20923276,0.0294302,0.012978755,0.00038563355],"about_ca_topic_score_codex":0.000009860172,"about_ca_topic_score_gemma":0.0000015857057,"teacher_disagreement_score":0.4293061,"about_ca_system_score_codex":0.00002193393,"about_ca_system_score_gemma":0.00043728756,"threshold_uncertainty_score":0.9999369},"labels":[],"label_agreement":null},{"id":"W1974586799","doi":"10.1172/jci25148","title":"Caffey disease: an unlikely collagenopathy","year":2005,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Osteomyelitis and Bone Disorders Research","field":"Medicine","cited_by":61,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Shriners Hospitals for Children - Canada; Montreal Children's Hospital","funders":"Shriners Hospitals for Children; McGill University","keywords":"Osteogenesis imperfecta; Missense mutation; Hyperostosis; Dentinogenesis imperfecta; Connective tissue; Pathology; Ehlers–Danlos syndrome; Mutation; Medicine; Genetics; Biology; Anatomy; Gene","score_opus":0.14117605227772934,"score_gpt":0.43565172704036237,"score_spread":0.29447567476263303,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1974586799","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1705633,0.0015780707,0.00003198705,0.82573014,0.0009482087,0.00041374218,0.000038802984,0.000021154778,0.0006746089],"genre_scores_gemma":[0.01874752,0.0018065366,0.0031420419,0.9117546,0.055535123,0.000009681656,0.0006809799,0.00012553654,0.008197987],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9946185,0.000709216,0.0024069916,0.0003414696,0.0015675939,0.00035626342],"domain_scores_gemma":[0.99539834,0.00049466675,0.0014874656,0.00046109298,0.0011958994,0.0009625098],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0023265246,0.00027149616,0.0011692714,0.0003226277,0.00007433646,0.000092289745,0.00028928684,0.0009244379,0.00037487422],"category_scores_gemma":[0.0033369283,0.0002100054,0.0006367229,0.00024670849,0.00039433164,0.00030404644,0.00004086114,0.0037857923,0.00007897918],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041606004,0.0001767035,0.013614917,0.00026955697,0.00012735756,0.002162341,0.00005210296,0.0000058269593,0.00009077519,0.000011791527,0.96026033,0.022812234],"study_design_scores_gemma":[0.0023063156,0.0022464276,0.07893194,0.00081541965,0.00050392415,0.00017823801,0.0000318471,0.00018915915,0.000026240326,0.0011057183,0.91342807,0.00023670605],"about_ca_topic_score_codex":0.000012604237,"about_ca_topic_score_gemma":0.0000076541655,"teacher_disagreement_score":0.15181579,"about_ca_system_score_codex":0.00010728609,"about_ca_system_score_gemma":0.0025789356,"threshold_uncertainty_score":0.9985125},"labels":[],"label_agreement":null},{"id":"W1975675431","doi":"10.1172/jci37785","title":"Possible dual roles for prostacyclin in human pregnancy and labor","year":2008,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Preterm Birth and Chorioamnionitis","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Newcastle University","keywords":"Myometrium; Prostacyclin; Smooth muscle; Uterus; Stimulation; Prostaglandin; Endocrinology; Internal medicine; Pregnancy; Biology; Cell biology; Medicine","score_opus":0.08327798050714554,"score_gpt":0.38388578994822486,"score_spread":0.30060780944107934,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1975675431","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.70156246,0.0025107858,0.000013210818,0.29442325,0.00058701757,0.00066835806,0.000047442198,0.000014123136,0.00017336126],"genre_scores_gemma":[0.20095485,0.010868148,0.013008132,0.7326874,0.0363295,0.00010156371,0.00084104796,0.00020110513,0.0050082416],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9968894,0.0001874477,0.0020508894,0.00024351194,0.0003932472,0.00023551716],"domain_scores_gemma":[0.9972523,0.0005577581,0.0014062098,0.00017214403,0.00038705816,0.00022452451],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00070861774,0.00020305885,0.0009405855,0.00024159404,0.00006170777,0.000035160334,0.00009237865,0.00091126945,0.000013702717],"category_scores_gemma":[0.0019563313,0.00016429972,0.00026825973,0.00011272028,0.00028164216,0.00020532362,0.000023248365,0.0022054994,0.000001516241],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032427837,0.00013119729,0.40553078,0.0010252692,0.00015193205,0.0014371447,0.00032616008,0.0000010839989,0.00030447257,0.000058766578,0.58149374,0.00921516],"study_design_scores_gemma":[0.019436859,0.007905665,0.64244115,0.020744907,0.00075777696,0.0017965491,0.000055698198,0.00014663188,0.0017787676,0.023602886,0.28058282,0.000750295],"about_ca_topic_score_codex":0.0000069472107,"about_ca_topic_score_gemma":0.000010464029,"teacher_disagreement_score":0.5006076,"about_ca_system_score_codex":0.00003742306,"about_ca_system_score_gemma":0.00057152426,"threshold_uncertainty_score":0.95819205},"labels":[],"label_agreement":null},{"id":"W1975748957","doi":"10.1172/jci31095","title":"FTY720, a new alternative for treating blast crisis chronic myelogenous leukemia and Philadelphia chromosome–positive acute lymphocytic leukemia","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Chronic Myeloid Leukemia Treatments","field":"Medicine","cited_by":332,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"National Cancer Institute; D. Warren Brown Family Foundation; Associazione Italiana per la Ricerca sul Cancro; Fonds de Recherche du Québec - Santé; Ministero della Salute; Ohio State University; American-Italian Cancer Foundation","keywords":"Chronic myelogenous leukemia; Cancer research; Philadelphia chromosome; Leukemia; Dasatinib; Progenitor cell; Medicine; Myeloid leukemia; Immunology; Imatinib; Stem cell; Biology","score_opus":0.052966102490439086,"score_gpt":0.3724998987889664,"score_spread":0.3195337962985273,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1975748957","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9885501,0.0010585866,0.0069648162,0.0017785968,0.00060354423,0.0007935711,0.000025110403,0.00004122284,0.0001844258],"genre_scores_gemma":[0.9751416,0.00080403837,0.017908908,0.0013203319,0.0043586697,0.000009968781,0.000057564444,0.000072075876,0.0003268616],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99567133,0.0001374466,0.0025130366,0.00049251487,0.0006430841,0.0005425667],"domain_scores_gemma":[0.9941901,0.001825123,0.0020256576,0.00029916584,0.0006019193,0.0010580163],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0019728423,0.00039742683,0.0012352354,0.00030178356,0.00017443122,0.00005864014,0.00019138194,0.00040623426,0.000039643903],"category_scores_gemma":[0.0016837156,0.00032845672,0.00050500385,0.00033525022,0.00034844587,0.0004257705,0.000065123626,0.00069268147,0.000014492576],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":true,"study_design_scores_codex":[0.040540878,0.0013855944,0.08851001,0.0025010624,0.033264495,0.010105006,0.023757182,0.010278113,0.18856521,0.0026337237,0.063520275,0.53493845],"study_design_scores_gemma":[0.22629975,0.047916822,0.27623734,0.009210135,0.019934017,0.023964,0.0026204314,0.09475636,0.2671276,0.023654034,0.0054314914,0.0028480296],"about_ca_topic_score_codex":0.00033601542,"about_ca_topic_score_gemma":0.00005452785,"teacher_disagreement_score":0.5320904,"about_ca_system_score_codex":0.013905698,"about_ca_system_score_gemma":0.012144341,"threshold_uncertainty_score":0.99991673},"labels":[],"label_agreement":null},{"id":"W1976257390","doi":"10.1172/jci44564","title":"Estrogen receptor activation reduces lipid synthesis in pancreatic islets and prevents β cell failure in rodent models of type 2 diabetes","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":180,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"NHLBI Division of Intramural Research; Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Environmental Health Sciences; Canadian Institutes of Health Research; Feinberg School of Medicine; U.S. Department of Agriculture; Canadian Diabetes Association; National Cancer Institute; National Institutes of Health; March of Dimes Foundation; Northwestern University; Juvenile Diabetes Research Foundation International","keywords":"Endocrinology; Internal medicine; Lipid metabolism; Glucose homeostasis; Estrogen receptor; Biology; Pancreatic islets; Insulin; Estrogen; Insulin resistance; Type 2 diabetes; Islet; Pancreas; Diabetes mellitus; Medicine","score_opus":0.08489625709867195,"score_gpt":0.3146943365462345,"score_spread":0.2297980794475626,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1976257390","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987985,0.0001693774,0.00001591894,0.00040029708,0.00014416121,0.00016630959,0.0000011228726,0.000004544592,0.0002997848],"genre_scores_gemma":[0.9927176,0.00029339243,0.006675239,0.00013806837,0.00012106034,0.0000053850276,0.0000033848405,0.000009837122,0.000036016685],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99802405,0.0002567827,0.0012386639,0.00013186636,0.00023375844,0.00011488968],"domain_scores_gemma":[0.9981595,0.0006405547,0.0007742533,0.00010443878,0.00016586152,0.00015535485],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012936051,0.0000993614,0.00056109624,0.00021537533,0.0000112113985,0.000006348826,0.000057306643,0.00014933042,0.000059543247],"category_scores_gemma":[0.0031416542,0.00007917591,0.00008073331,0.00022593598,0.00010104238,0.00031127784,0.000014693583,0.0002536967,0.0000025121924],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043632917,0.00044343708,0.886767,0.00017081629,0.00006643864,0.0000015728747,0.00066232,0.00007218466,0.10780547,0.00007759091,0.00026982065,0.003227022],"study_design_scores_gemma":[0.0022449282,0.0011190458,0.42210084,0.0021808255,0.0002130675,0.0000026411792,0.0003749733,0.0026626084,0.5648026,0.004128934,0.000044128254,0.0001254284],"about_ca_topic_score_codex":0.000023214729,"about_ca_topic_score_gemma":0.0000014939568,"teacher_disagreement_score":0.46466616,"about_ca_system_score_codex":0.00003679885,"about_ca_system_score_gemma":0.00017430224,"threshold_uncertainty_score":0.37610802},"labels":[],"label_agreement":null},{"id":"W1976507289","doi":"10.1172/jci24898","title":"Small-molecule correctors of defective  F508-CFTR cellular processing identified by high-throughput screening","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cystic Fibrosis Research Advances","field":"Medicine","cited_by":534,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Biomedical Imaging and Bioengineering; National Eye Institute; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; Canadian Institutes of Health Research; Cystic Fibrosis Foundation; University of California, San Francisco; National Institutes of Health","keywords":"Cystic fibrosis transmembrane conductance regulator; Chemistry; Cystic fibrosis; Mutant; Chloride channel; Biochemistry; Molecular biology; Biology; Gene","score_opus":0.0881346237300916,"score_gpt":0.3969814860429774,"score_spread":0.30884686231288583,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1976507289","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95735586,0.0011669334,0.039538957,0.0013085878,0.00026448816,0.00022474582,0.0000048231564,0.000016855365,0.000118748816],"genre_scores_gemma":[0.9430222,0.000071266506,0.05567201,0.00029555304,0.0007007657,0.000002755754,0.000019081455,0.000024866273,0.00019153867],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99645513,0.0003009041,0.0019440295,0.00023275209,0.0008268732,0.00024031753],"domain_scores_gemma":[0.9958936,0.00087994366,0.001669889,0.00017895942,0.000965934,0.00041168713],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022657411,0.00015242535,0.0007127685,0.00016854137,0.000070164715,0.00004067804,0.00016750733,0.00015839403,0.000051706407],"category_scores_gemma":[0.008246076,0.00012518787,0.00026893098,0.0003649258,0.00044418316,0.00044368862,0.000045906654,0.00073962583,0.000009093831],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021393811,0.00078736845,0.13742252,0.00049743726,0.00038816166,0.00006725922,0.0006577029,0.00087680534,0.7397056,0.000106341584,0.0099375285,0.107413866],"study_design_scores_gemma":[0.0061275945,0.0028649596,0.12439862,0.0025202755,0.0004684781,0.000095923046,0.00033191437,0.008591925,0.85000545,0.0014389111,0.0028598646,0.00029611468],"about_ca_topic_score_codex":0.000040344028,"about_ca_topic_score_gemma":0.000013595331,"teacher_disagreement_score":0.11029979,"about_ca_system_score_codex":0.0000831393,"about_ca_system_score_gemma":0.0004508729,"threshold_uncertainty_score":0.987192},"labels":[],"label_agreement":null},{"id":"W1976819858","doi":"10.1172/jci21846","title":"EphB6-null mutation results in compromised T cell function","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Axon Guidance and Neuronal Signaling","field":"Neuroscience","cited_by":98,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal; Hôpital Notre-Dame","funders":"Canadian Institutes of Health Research; Université de Montréal; Roche Organ Transplant Research Foundation; Kidney Foundation of Canada; Heart and Stroke Foundation of Canada","keywords":"Mutation; Function (biology); Computational biology; Biology; Genetics; Bioinformatics; Gene","score_opus":0.1541023220908831,"score_gpt":0.37287259020978414,"score_spread":0.21877026811890105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1976819858","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99461126,0.000026158681,0.0017930478,0.0019901053,0.00076519034,0.00013125617,0.0000019470124,0.000015699881,0.0006653147],"genre_scores_gemma":[0.99595165,0.000053489362,0.001034061,0.0024834592,0.00041946932,0.0000015651267,0.0000021476685,0.000010766873,0.00004336333],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99692386,0.00036456663,0.001873693,0.00023147148,0.000453225,0.00015320104],"domain_scores_gemma":[0.9973481,0.0008996161,0.0013513226,0.0001095999,0.0001270501,0.00016430356],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018248921,0.00010334602,0.0002775979,0.00014940399,0.00006240874,0.000036142264,0.00015878965,0.000120777455,0.000009526667],"category_scores_gemma":[0.0043080817,0.00008977617,0.00013678744,0.0003589109,0.00013268355,0.0005446039,0.00001672669,0.00057372643,0.000044504723],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0031624797,0.0006234127,0.005327139,0.00004293867,0.0000073797682,0.00030369635,0.00058621797,0.047200028,0.932062,0.001893601,0.00061507896,0.008176042],"study_design_scores_gemma":[0.013896913,0.0024439886,0.10041807,0.00034457812,0.000043753687,0.00008192191,0.00008475073,0.0024716835,0.8129837,0.06564251,0.0013218194,0.00026632525],"about_ca_topic_score_codex":0.000011031661,"about_ca_topic_score_gemma":0.000006807123,"teacher_disagreement_score":0.1190783,"about_ca_system_score_codex":0.00005712427,"about_ca_system_score_gemma":0.00024665846,"threshold_uncertainty_score":0.51574874},"labels":[],"label_agreement":null},{"id":"W1977576363","doi":"10.1172/jci13737","title":"The link between heparan sulfate and hereditary bone disease: finding a function for the EXT family of putative tumor suppressor proteins","year":2001,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Proteoglycans and glycosaminoglycans research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":151,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Medical Research Council; Natural Sciences and Engineering Research Council of Canada; Medical Research Council Canada","keywords":"Hereditary multiple exostoses; Biology; Gene; Genetics; Heparan sulfate; Mutation; Skeletal disorder; Glycoprotein; Osteoporosis","score_opus":0.1533370374654977,"score_gpt":0.4285861005199525,"score_spread":0.2752490630544548,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1977576363","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.010821908,0.9825414,0.0029800907,0.0013047655,0.00034608005,0.0017446973,0.00024778376,0.0000027821209,0.000010535852],"genre_scores_gemma":[0.0044875946,0.98995787,0.0005371354,0.00006190703,0.0043438296,0.00016436158,0.00020676813,0.000039582872,0.00020097489],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9965498,0.0006795909,0.0018388412,0.00028849684,0.00039247918,0.00025080802],"domain_scores_gemma":[0.9954854,0.0015356649,0.0019449278,0.00031740227,0.00045573723,0.0002608719],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0035198622,0.00024829808,0.0009446313,0.00007527253,0.00023698501,0.000068542555,0.00037460585,0.00028144283,0.0000017062474],"category_scores_gemma":[0.0034178284,0.00013196922,0.0006517879,0.0001818639,0.00061084295,0.000018259627,0.000111145,0.00066578377,6.9710285e-7],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006814163,0.000026534934,0.00024679455,0.0018460968,0.0006804591,0.000012755759,0.00001631365,0.000012636965,0.00029809118,0.00004121671,0.00087980914,0.99525785],"study_design_scores_gemma":[0.0010071639,0.0017349562,0.0030482886,0.0023224184,0.0012575007,0.000039270177,0.00004158387,0.00013317015,0.00029503685,0.0016217766,0.98827845,0.00022037946],"about_ca_topic_score_codex":0.000012798802,"about_ca_topic_score_gemma":0.0000064689784,"teacher_disagreement_score":0.9950375,"about_ca_system_score_codex":0.0000208815,"about_ca_system_score_gemma":0.00090440165,"threshold_uncertainty_score":0.5381549},"labels":[],"label_agreement":null},{"id":"W1979147243","doi":"10.1172/jci41789","title":"A molecular classifier for predicting future graft loss in late kidney transplant biopsies","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Renal Transplantation Outcomes and Treatments","field":"Medicine","cited_by":212,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"The Metabolomics Innovation Centre; University of Alberta","funders":"","keywords":"Medicine; Kidney transplantation; Transplantation; Renal function; Internal medicine; Proteinuria; Pathology; Fibrosis; Kidney; Biopsy; Urology","score_opus":0.05198470743307953,"score_gpt":0.3741028219329813,"score_spread":0.32211811449990174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979147243","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9894091,0.00004484601,0.0006645086,0.00849292,0.0010161706,0.00024196721,0.000024132029,0.000009638124,0.00009670616],"genre_scores_gemma":[0.9887122,0.00020400842,0.008725059,0.001577808,0.0006450848,0.0000060922875,0.00004618173,0.000014334213,0.00006926643],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99824953,0.00006489521,0.001165616,0.00012900394,0.00025426786,0.00013667256],"domain_scores_gemma":[0.9986081,0.00028675335,0.0004705543,0.000096340285,0.00018424288,0.00035402598],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008737393,0.00011147868,0.00041352323,0.00012616637,0.000030977553,0.00001681308,0.000064801985,0.00021073615,0.000014929495],"category_scores_gemma":[0.00051489146,0.000077289376,0.0002882237,0.0001265256,0.000096305215,0.00015074226,0.0000028100933,0.00058366876,0.0000021859985],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00075978815,0.00017127661,0.98037577,0.00023784275,0.00018640066,0.00026951457,0.00037126255,0.000059372593,0.015075018,0.000550048,0.00007358928,0.0018701404],"study_design_scores_gemma":[0.011906493,0.0009797296,0.96263516,0.0014665042,0.00055792223,0.0003135347,0.000045205805,0.0027578229,0.013217392,0.0038186293,0.0021557943,0.00014583317],"about_ca_topic_score_codex":0.00000475445,"about_ca_topic_score_gemma":0.00001480001,"teacher_disagreement_score":0.01774061,"about_ca_system_score_codex":0.000012804438,"about_ca_system_score_gemma":0.00024199129,"threshold_uncertainty_score":0.31517693},"labels":[],"label_agreement":null},{"id":"W1979904368","doi":"10.1172/jci23153","title":"Vasohibin: the feedback on a new inhibitor of angiogenesis","year":2004,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Angiogenesis and VEGF in Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Angiogenesis; Angiogenesis inhibitor; Endogeny; Cell biology; VEGF receptors; Chemistry; Vascular endothelial growth factor; Endothelial stem cell; Cancer research; Pharmacology; Biology; Biochemistry; In vitro","score_opus":0.06983046712822628,"score_gpt":0.34469650687594156,"score_spread":0.2748660397477153,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979904368","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.37261948,0.0049909195,0.00057624496,0.6174027,0.0036116964,0.00036408857,0.000047492347,0.0000064298324,0.00038099263],"genre_scores_gemma":[0.092084035,0.0031231986,0.002751253,0.8222361,0.076183826,0.000007901228,0.00020190272,0.00013289314,0.0032788753],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9972119,0.00026718035,0.0015854759,0.0002599397,0.000494834,0.00018071018],"domain_scores_gemma":[0.9967231,0.00019738173,0.0021588425,0.00041115136,0.00037669126,0.00013284647],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009971558,0.00023419705,0.00056200405,0.00007511142,0.000044461893,0.000024042743,0.00042648497,0.0010211352,0.000032781343],"category_scores_gemma":[0.0007541331,0.00015034784,0.0010543788,0.00012812695,0.00029179038,0.000006819445,0.000056669694,0.0007247964,0.000010873891],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001309302,0.00003600327,0.0014855933,0.000041888237,0.00029411123,0.000012847814,0.000017668452,0.00015292133,0.0062012654,0.000020059584,0.9885085,0.0030981689],"study_design_scores_gemma":[0.0012545341,0.0018266357,0.005109608,0.0005366459,0.00034288995,0.00004248103,0.0000128321035,0.0000037921407,0.066788875,0.0013871702,0.9224278,0.000266738],"about_ca_topic_score_codex":0.000019804213,"about_ca_topic_score_gemma":0.000005077443,"teacher_disagreement_score":0.28053546,"about_ca_system_score_codex":0.00003013202,"about_ca_system_score_gemma":0.001238914,"threshold_uncertainty_score":0.78759307},"labels":[],"label_agreement":null},{"id":"W1980006442","doi":"10.1172/jci8934","title":"The viral anti-inflammatory chemokine-binding protein M-T7 reduces intimal hyperplasia after vascular injury","year":2000,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":95,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Viron Therapeutics (Canada); Robarts Clinical Trials; University of Alberta; Western University","funders":"Medical Research Council; Medical Research Council Canada; Heart and Stroke Foundation of Canada","keywords":"Intimal hyperplasia; Restenosis; Chemokine; Neointimal hyperplasia; Medicine; Angioplasty; Immunology; Inflammation; Pathology; Internal medicine; Stent","score_opus":0.01917961535525104,"score_gpt":0.30508674984408773,"score_spread":0.2859071344888367,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1980006442","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99617934,0.0010360909,0.0000051227266,0.0012761024,0.0010016608,0.000165036,0.0000023729606,0.00001841045,0.00031585572],"genre_scores_gemma":[0.99570465,0.00040083073,0.0001490401,0.00023751077,0.00029864543,0.0000091367165,0.000004904808,0.000016538228,0.0031787227],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970347,0.0009184855,0.0015154256,0.00016321898,0.000107159125,0.00026096063],"domain_scores_gemma":[0.99857795,0.00035182788,0.0006290753,0.00021107937,0.00017318343,0.000056868612],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002572722,0.00016372098,0.00040849225,0.000086099215,0.00021034041,0.000060100712,0.00031929353,0.00033088183,0.00053398986],"category_scores_gemma":[0.0010908591,0.00010521245,0.00037304263,0.00009163577,0.0007069336,0.0003218881,0.00004000602,0.00095879915,0.0004116836],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0038220063,0.00012801193,0.0067952094,0.000016994376,0.0004340771,0.000021124464,0.00030182808,0.0000069393145,0.9206381,0.0001940479,0.004430782,0.06321092],"study_design_scores_gemma":[0.0016774365,0.0010535291,0.06776362,0.00033016823,0.00011018124,0.00013255252,0.00010407024,0.000014787199,0.82542825,0.00050039205,0.10265771,0.00022729387],"about_ca_topic_score_codex":0.000002553025,"about_ca_topic_score_gemma":8.874e-7,"teacher_disagreement_score":0.09822693,"about_ca_system_score_codex":0.000030808093,"about_ca_system_score_gemma":0.00023670538,"threshold_uncertainty_score":0.58468145},"labels":[],"label_agreement":null},{"id":"W1981195782","doi":"10.1172/jci43132","title":"Caught red-handed: uric acid is an agent of inflammation","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Inflammasome and immune disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":79,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; Fondation pour la Recherche Médicale; National Institutes of Health; University of Calgary","keywords":"Endogeny; Inflammation; Uric acid; Pathogenesis; In vivo; Immunology; Inflammatory response; Chemistry; Biology; Biochemistry","score_opus":0.03697079814256333,"score_gpt":0.34030656719552277,"score_spread":0.30333576905295945,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981195782","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99767125,0.000095669784,0.00022655936,0.0010789547,0.0006073796,0.00006747191,0.0000020773539,0.0000023815192,0.00024823938],"genre_scores_gemma":[0.9970789,0.00018762758,0.0014218485,0.00034767308,0.00078188383,0.0000012779257,0.00003741414,0.000010075337,0.00013333352],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99837357,0.000118410906,0.0010991504,0.00011843565,0.00019327685,0.000097135526],"domain_scores_gemma":[0.9982452,0.000022105578,0.0009818757,0.00023055729,0.00040383905,0.00011647087],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012049263,0.00008747498,0.00021326795,0.000060205923,0.000035276287,0.000015026568,0.00017092806,0.00024548845,0.000044871096],"category_scores_gemma":[0.0009630682,0.000074367,0.00018286266,0.00007861219,0.00014679623,0.000029624018,0.000027685026,0.00028885354,0.0000045403544],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011594904,0.00005050847,0.017315537,0.000012305848,0.000048975293,0.0000011111914,0.00012516737,0.0000189531,0.9718596,0.000074823634,0.0018209121,0.008556175],"study_design_scores_gemma":[0.00092267635,0.0006610555,0.052532703,0.000021475233,0.00004379017,0.0000143382,0.000063685016,0.00011430783,0.9246776,0.0016272787,0.019219786,0.00010126734],"about_ca_topic_score_codex":0.0000033798756,"about_ca_topic_score_gemma":0.000025265575,"teacher_disagreement_score":0.047181945,"about_ca_system_score_codex":0.000003362386,"about_ca_system_score_gemma":0.00018674698,"threshold_uncertainty_score":0.30325982},"labels":[],"label_agreement":null},{"id":"W1981374189","doi":"10.1172/jci35197","title":"Islet transplantation in patients with autoimmune diabetes induces homeostatic cytokines that expand autoreactive memory T cells","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Diabetes and associated disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":192,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Juvenile Diabetes Research Foundation","funders":"Zentrum für Regenerative Therapien Dresden; Ministero della Salute; Technische Universität Dresden","keywords":"Immunology; Autoimmunity; Transplantation; Immunosuppression; T cell; Autoimmune disease; Immune system; Medicine; Islet; Biology; Diabetes mellitus; Endocrinology; Internal medicine; Antibody","score_opus":0.021480517504402073,"score_gpt":0.2672143550368892,"score_spread":0.2457338375324871,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981374189","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992855,0.000115602896,0.000027740323,0.00016680191,0.00020700056,0.00011694369,0.000011226521,0.0000035646137,0.000065601955],"genre_scores_gemma":[0.9987675,0.00028699994,0.00040471094,0.00031640788,0.0000958966,0.0000030734263,0.00008867854,0.0000114496215,0.000025309675],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986536,0.00017706737,0.0006285219,0.00014688027,0.00024484284,0.00014908906],"domain_scores_gemma":[0.998828,0.00011004866,0.00071552984,0.00008720103,0.00017607182,0.00008316374],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046656516,0.00011916427,0.00029114058,0.000075374955,0.00004457993,0.000015140791,0.000102891674,0.00015178166,0.000004308532],"category_scores_gemma":[0.00021244778,0.00009169732,0.00009518999,0.000109539214,0.00016359217,0.00003991901,0.000010068701,0.00020374442,0.0000013081299],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025244948,0.00030601336,0.96053356,0.000024717896,0.00012248951,0.0000056947883,0.0003893487,0.00031946745,0.034919,0.000001976101,0.00041210942,0.0027131992],"study_design_scores_gemma":[0.0030336897,0.0009036336,0.9203191,0.000095623436,0.00004556371,9.5168565e-7,0.00010040723,0.00003199331,0.07511967,0.00011559834,0.000105755615,0.00012803006],"about_ca_topic_score_codex":0.000009020555,"about_ca_topic_score_gemma":0.000006233344,"teacher_disagreement_score":0.04021445,"about_ca_system_score_codex":0.00001325261,"about_ca_system_score_gemma":0.00014528514,"threshold_uncertainty_score":0.37393084},"labels":[],"label_agreement":null},{"id":"W1981458452","doi":"10.1172/jci37028","title":"The diabetes gene Pdx1 regulates the transcriptional network of pancreatic endocrine progenitor cells in mice","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":175,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Nutrition, Metabolism and Diabetes","funders":"National Institute of Child Health and Human Development; National Institutes of Health; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; University of Pennsylvania","keywords":"PDX1; Progenitor cell; Endocrine system; Progenitor; Diabetes mellitus; Enteroendocrine cell; Biology; Pancreas; Gene; Endocrinology; Internal medicine; Stem cell; Cell biology; Medicine; Bioinformatics; Genetics; Hormone; Islet","score_opus":0.042307176337199805,"score_gpt":0.3184363473086463,"score_spread":0.27612917097144646,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981458452","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9869146,0.0020086018,0.000023493727,0.010107994,0.00053867704,0.00023807712,0.0000017159338,0.000007026472,0.0001598546],"genre_scores_gemma":[0.99373215,0.00054261426,0.0025635988,0.0016294811,0.0013118007,0.000004263005,0.0000047251797,0.0000074982045,0.00020389007],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9973249,0.00033843334,0.0016338784,0.00010537285,0.00039923057,0.00019818405],"domain_scores_gemma":[0.99661297,0.0019593164,0.00078459183,0.00016095303,0.000326025,0.00015617115],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002360375,0.00011059656,0.0004905376,0.000042648047,0.00007519721,0.000020616522,0.00013255792,0.00008203202,0.000020730698],"category_scores_gemma":[0.002001619,0.000056955414,0.00025943344,0.0002765712,0.00029502006,0.00010604197,0.0000067370675,0.00038770566,0.000003984076],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011853555,0.00051511417,0.5052467,0.000086869775,0.00040802293,0.000015418207,0.00025260157,0.0010729386,0.46346292,0.0019947977,0.0077499286,0.01800935],"study_design_scores_gemma":[0.0025041662,0.0012900538,0.850456,0.00041485022,0.00037180644,0.000025971594,0.00007090467,0.0022074345,0.120711714,0.01951982,0.0023407964,0.00008650419],"about_ca_topic_score_codex":0.0000026349403,"about_ca_topic_score_gemma":0.0000014549173,"teacher_disagreement_score":0.3452093,"about_ca_system_score_codex":0.00002785359,"about_ca_system_score_gemma":0.00023897865,"threshold_uncertainty_score":0.23962694},"labels":[],"label_agreement":null},{"id":"W1981736657","doi":"10.1172/jci11941","title":"Somatostatin is required for masculinization of growth hormone–regulated hepatic gene expression but not of somatic growth","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Growth Hormone and Insulin-like Growth Factors","field":"Medicine","cited_by":166,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Royal Victoria Hospital","funders":"National Institute of Neurological Disorders and Stroke; Canadian Institutes of Health Research; National Institutes of Health; Robert Wood Johnson Foundation","keywords":"Internal medicine; Endocrinology; Sexual dimorphism; Biology; Somatostatin; Ultradian rhythm; Hypothalamus; Prolactin; Hormone; Circadian rhythm; Medicine","score_opus":0.06850152190120001,"score_gpt":0.3390165227282402,"score_spread":0.27051500082704016,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981736657","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9890349,0.00023500508,0.007816471,0.0018577139,0.00032700496,0.0006139705,0.000019475088,0.000023520603,0.000071923656],"genre_scores_gemma":[0.9692147,0.0008525988,0.028732948,0.0006327172,0.00036492234,0.00000836734,0.000071085145,0.00004501795,0.00007765264],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9938129,0.0002788876,0.0044906824,0.0002691606,0.0008858108,0.00026253503],"domain_scores_gemma":[0.9920265,0.00095597206,0.0039644996,0.00031298393,0.002334594,0.0004054128],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019875818,0.00025954834,0.0013398126,0.0003828898,0.00006849224,0.00001600101,0.00021129852,0.00039732552,0.0000302505],"category_scores_gemma":[0.007235585,0.00020574461,0.00059828034,0.0005709066,0.00030259672,0.000547347,0.000038520706,0.00034375483,0.0000054095],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0030350415,0.00074703037,0.27006364,0.00087916566,0.00037283188,0.000020609565,0.0012375348,0.000024068406,0.71870774,0.00027972055,0.0030180202,0.0016145948],"study_design_scores_gemma":[0.006485147,0.0028285747,0.28076282,0.00078727974,0.00055823993,0.000056515488,0.00016578118,0.0037022666,0.69558173,0.008864343,0.000026075972,0.00018125203],"about_ca_topic_score_codex":0.00002959819,"about_ca_topic_score_gemma":5.945318e-7,"teacher_disagreement_score":0.02312605,"about_ca_system_score_codex":0.000049763177,"about_ca_system_score_gemma":0.000456987,"threshold_uncertainty_score":0.86621934},"labels":[],"label_agreement":null},{"id":"W1982006510","doi":"10.1172/jci59110","title":"Anti-ganglioside antibody internalization attenuates motor nerve terminal injury in a mouse model of acute motor axonal neuropathy","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Peripheral Neuropathies and Disorders","field":"Medicine","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"University of Glasgow; Cancer Research UK","keywords":"Acute motor axonal neuropathy; Internalization; Endocytic cycle; Ganglioside; Endocytosis; Motor neuron; Neuroscience; Complement system; Cell biology; Endosome; Biology; Axoplasmic transport; Axon; Neuromuscular junction; Motor nerve; Immunology; Guillain-Barre syndrome; Medicine; Immune system; Biochemistry; Cell; Intracellular","score_opus":0.057008942601678596,"score_gpt":0.3723510009975372,"score_spread":0.3153420583958586,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1982006510","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997141,0.0001012371,0.0013765926,0.0006025123,0.0005105383,0.00018630926,0.0000276614,0.000012163052,0.000041983374],"genre_scores_gemma":[0.9952986,0.00025674692,0.0022830206,0.0014631127,0.00051136344,0.0000023476014,0.000013636249,0.000027617478,0.00014353723],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.996978,0.00025762472,0.0019043097,0.00015918697,0.00046571187,0.00023516035],"domain_scores_gemma":[0.99775726,0.00013567455,0.0012375263,0.0001723527,0.000342948,0.00035427074],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011794865,0.00017213216,0.00068762706,0.0002637932,0.00002648068,0.000017769902,0.00014668505,0.00015329993,0.000016160984],"category_scores_gemma":[0.0013401988,0.00013876498,0.000319801,0.00020854324,0.00021442972,0.0006288557,0.000051234754,0.00053421216,0.0000033183364],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001079209,0.0004627819,0.5304883,0.00006981874,0.00005852541,0.00004893835,0.00019203918,0.00016474632,0.46642134,0.000059256414,0.00026104713,0.0006939842],"study_design_scores_gemma":[0.0062223985,0.004815471,0.7980825,0.00095935183,0.00063817814,0.0003560304,0.00014544411,0.12044619,0.06664497,0.0011363946,0.00014858446,0.00040452575],"about_ca_topic_score_codex":0.000020586738,"about_ca_topic_score_gemma":0.0000020883788,"teacher_disagreement_score":0.39977637,"about_ca_system_score_codex":0.00003148896,"about_ca_system_score_gemma":0.00019429691,"threshold_uncertainty_score":0.5658672},"labels":[],"label_agreement":null},{"id":"W1982761604","doi":"10.1172/jci24219","title":"Developmental control of CD8+ T cell–avidity maturation in autoimmune diabetes","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Diabetes and associated disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":108,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Calgary","funders":"Canadian Institutes of Health Research; Alberta Heritage Foundation for Medical Research; Fondation pour la Recherche Médicale; National Institutes of Health; Canadian Diabetes Association","keywords":"Avidity; Autoimmunity; Immunology; Biology; T cell; T-cell receptor; CD8; Antigen; Central tolerance; Autoimmune disease; Population; Immune system; Medicine; Antibody","score_opus":0.01978630720306778,"score_gpt":0.29308075549969786,"score_spread":0.2732944482966301,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1982761604","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982885,0.00038966254,0.00012589605,0.0008121526,0.00013442231,0.00006487754,0.000003739777,0.0000017292274,0.00017902625],"genre_scores_gemma":[0.9970253,0.00011366209,0.0020442547,0.0005426809,0.00020602431,0.0000012953899,0.000019424766,0.0000063680613,0.00004096408],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984911,0.00014223589,0.0010237457,0.00008983045,0.00014475081,0.000108321816],"domain_scores_gemma":[0.9988878,0.00007347571,0.0007833592,0.000050113962,0.00014386872,0.00006140556],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011222496,0.000072608265,0.00024488036,0.000044175147,0.000017596874,0.000010662946,0.0001010263,0.0001572708,0.000010815865],"category_scores_gemma":[0.0007192824,0.00006418626,0.00012556759,0.00007463534,0.00007864931,0.000018701023,0.00001668248,0.0001590532,0.0000026626483],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011560626,0.0002189571,0.33256978,0.000015405081,0.000055404977,4.429535e-7,0.000048292095,0.0006465676,0.6545791,0.000018582099,0.0011045625,0.010627266],"study_design_scores_gemma":[0.0036033364,0.00048083495,0.73458725,0.00008022327,0.000040119336,9.8403e-7,0.00008832767,0.0012276393,0.25445032,0.0005208174,0.004772577,0.00014754523],"about_ca_topic_score_codex":0.0000024106223,"about_ca_topic_score_gemma":0.000011080645,"teacher_disagreement_score":0.40201747,"about_ca_system_score_codex":0.000016796612,"about_ca_system_score_gemma":0.00016770982,"threshold_uncertainty_score":0.26174396},"labels":[],"label_agreement":null},{"id":"W1982797619","doi":"10.1172/jci32040","title":"Selective inhibition of proprotein convertases represses the metastatic potential of human colorectal tumor cells","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":128,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute","funders":"Canadian Institutes of Health Research; Ligue Contre le Cancer","keywords":"Furin; Cancer research; Metastasis; Colorectal cancer; Cell culture; Proprotein Convertases; Biology; Cell migration; Medicine; Internal medicine; Endocrinology; Cancer; LDL receptor; Biochemistry","score_opus":0.052076592155756087,"score_gpt":0.32619882948594553,"score_spread":0.2741222373301894,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1982797619","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990552,0.00012763937,0.00025005228,0.00012310715,0.0000976865,0.00025520803,0.000021696547,0.000001951145,0.000067463116],"genre_scores_gemma":[0.9983929,0.000050572435,0.0011615627,0.00012490443,0.0002145452,0.000006190658,0.000018732435,0.000007137583,0.000023493978],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980639,0.0004296895,0.0010603954,0.00012092714,0.00024030078,0.000084783605],"domain_scores_gemma":[0.99769074,0.00009411817,0.0014895907,0.00012168067,0.0005348537,0.00006902259],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009850521,0.000086666245,0.000305729,0.000037235914,0.00006672271,0.0000051960633,0.00011183687,0.0000753479,0.000015955837],"category_scores_gemma":[0.0010503957,0.000059005317,0.00019892553,0.00009074776,0.00054884696,0.000012753359,0.00003316715,0.00019452682,8.6296683e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025529834,0.00012789163,0.0024733047,0.000046964655,0.00009199082,0.0000082840525,0.000096961034,0.00007236316,0.99601495,0.00005517423,0.0006334634,0.00012338081],"study_design_scores_gemma":[0.0007088447,0.002104383,0.009920183,0.0000458474,0.00009584194,0.000066003144,0.00006255514,0.000040046572,0.98556894,0.0012659192,0.000060354392,0.0000610548],"about_ca_topic_score_codex":0.00002132266,"about_ca_topic_score_gemma":0.000004827667,"teacher_disagreement_score":0.010445955,"about_ca_system_score_codex":0.00000509828,"about_ca_system_score_gemma":0.00027226607,"threshold_uncertainty_score":0.2406167},"labels":[],"label_agreement":null},{"id":"W1982999222","doi":"10.1172/jci78371","title":"Glucagon-like peptide-1 receptors in the brain: controlling food intake and body weight","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Diabetes Treatment and Management","field":"Medicine","cited_by":234,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Banting and Best Diabetes Centre, University of Toronto; Novo Nordisk","keywords":"Endocrinology; Agonist; Glucagon-like peptide-1; Internal medicine; Weight loss; Receptor; Glucagon; Glucagon-like peptide 1 receptor; Insulin; Diabetes mellitus; Chemistry; Gastric emptying; Hormone; Biology; Obesity; Medicine; Type 2 diabetes","score_opus":0.04995993102065931,"score_gpt":0.32967399250644447,"score_spread":0.27971406148578515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1982999222","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97197336,0.00019490687,0.00023102763,0.025576968,0.0005677553,0.00023249832,2.6544419e-7,0.0000070773453,0.0012161509],"genre_scores_gemma":[0.9886161,0.00017170761,0.0016109066,0.008630767,0.0007341306,0.000004339916,0.0000052598252,0.00000890766,0.0002178863],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99819386,0.0003049332,0.00096690096,0.00011927219,0.00028885013,0.00012619956],"domain_scores_gemma":[0.9979301,0.001176264,0.000517469,0.0001328994,0.00009461624,0.00014863144],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0036378568,0.000098171746,0.0004055249,0.0001052766,0.00003631142,0.000036693178,0.000086089734,0.000082491526,0.000013716519],"category_scores_gemma":[0.0019312898,0.000057580884,0.00013122012,0.00012338637,0.00013056793,0.00015579077,0.000017711853,0.00033341668,0.0000063059024],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006044152,0.0006366523,0.8572306,0.00012784089,0.00060154486,0.000030875042,0.0011691097,0.00002492154,0.0005048803,0.010485106,0.040554043,0.08803001],"study_design_scores_gemma":[0.016892644,0.008676424,0.6826887,0.00079697353,0.00079239334,0.000039426115,0.000493499,0.0036613625,0.0003920625,0.021848518,0.2634986,0.00021938563],"about_ca_topic_score_codex":0.000003161719,"about_ca_topic_score_gemma":0.000010617264,"teacher_disagreement_score":0.22294457,"about_ca_system_score_codex":0.00002164379,"about_ca_system_score_gemma":0.00004889643,"threshold_uncertainty_score":0.23480803},"labels":[],"label_agreement":null},{"id":"W1983062261","doi":"10.1172/jci12346","title":"Tumor-specific immunity and antiangiogenesis generated by a DNA vaccine encoding calreticulin linked to a tumor antigen","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immunotherapy and Immune Responses","field":"Immunology and Microbiology","cited_by":242,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Cancer Institute; National Health Research Institutes; National Institutes of Health; University of Alberta; Alexander and Margaret Stewart Trust","keywords":"Calreticulin; DNA vaccination; Antigen; Cancer research; Immunotherapy; Immunology; Biology; CD8; Medicine; Immune system","score_opus":0.05023108018379265,"score_gpt":0.3201335877642197,"score_spread":0.26990250758042705,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983062261","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98341453,0.013413322,0.00041587834,0.0016573147,0.00084462186,0.00019645302,0.000009386348,0.00002534391,0.000023147604],"genre_scores_gemma":[0.9933158,0.003739368,0.00072455144,0.0016564123,0.00017808295,0.0000038261633,0.000029041084,0.000023950082,0.0003289568],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9967043,0.0009519943,0.0017221908,0.00023123383,0.0000881214,0.00030218004],"domain_scores_gemma":[0.9977195,0.0007095036,0.00086613395,0.00024378025,0.0003429864,0.000118073316],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023804477,0.00021809386,0.0006948953,0.00022035767,0.00024816123,0.000048632453,0.0002714324,0.00022482967,0.00024724938],"category_scores_gemma":[0.0012625301,0.00017856738,0.00022439727,0.00039160202,0.0002174702,0.00022322992,0.000060624596,0.0005697752,0.000076422875],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018173254,0.0001503994,0.023081135,0.000006436297,0.00022538443,0.000037427017,0.0003475862,0.0000086200125,0.95858717,0.00003316366,0.0078303795,0.007874951],"study_design_scores_gemma":[0.0058723167,0.0021798164,0.44079232,0.00032555647,0.00012400051,0.0014224784,0.00033957945,0.000037409736,0.39960256,0.0002751434,0.14854759,0.0004812291],"about_ca_topic_score_codex":0.000051314848,"about_ca_topic_score_gemma":0.0000045110523,"teacher_disagreement_score":0.55898464,"about_ca_system_score_codex":0.000032501386,"about_ca_system_score_gemma":0.00016163132,"threshold_uncertainty_score":0.7281766},"labels":[],"label_agreement":null},{"id":"W1983588069","doi":"10.1172/jci69346","title":"Leptin and the brain: then and now","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Regulation of Appetite and Obesity","field":"Neuroscience","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Nutrition, Metabolism and Diabetes","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; University of Washington; Office of Research and Development; U.S. Department of Veterans Affairs","keywords":"Leptin; Leptin receptor; Hormone; Obesity; Adipocyte; Endocrinology; Internal medicine; Insulin; Receptor; Medicine; Mutation; Biology; Neuroscience; Bioinformatics; Gene; Adipose tissue; Genetics","score_opus":0.08887928637240049,"score_gpt":0.3512826152669539,"score_spread":0.2624033288945534,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983588069","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93353623,0.00004074628,0.00007197631,0.06536368,0.00012911818,0.000094919444,1.9443824e-7,0.000004307048,0.0007588168],"genre_scores_gemma":[0.99143153,0.00021513077,0.00043437906,0.0072606094,0.00024386188,8.8995796e-7,9.459954e-8,0.0000035146318,0.00040998886],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99872124,0.00037008067,0.0005634665,0.00009209953,0.00019086296,0.00006226048],"domain_scores_gemma":[0.9968318,0.0023964078,0.00048588146,0.00008147958,0.00008169063,0.00012276375],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016023685,0.000050082075,0.00017041608,0.000027318209,0.00008340762,0.00009768705,0.00009359122,0.00005298032,0.00006088449],"category_scores_gemma":[0.004338459,0.000027057535,0.0000554715,0.00006231387,0.0006915804,0.00036615622,0.000032403932,0.0002114568,0.000024849642],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009716512,0.00024540458,0.37107873,0.000090725356,0.00007217335,0.000020479483,0.003403609,0.00012474846,0.17520703,0.16824359,0.1127197,0.16782215],"study_design_scores_gemma":[0.0024900155,0.000252162,0.83711946,0.000048831673,0.000020071251,0.000073819596,0.00007222828,0.0032925494,0.011817402,0.13452114,0.010208319,0.0000839884],"about_ca_topic_score_codex":0.00000561032,"about_ca_topic_score_gemma":0.0000017337449,"teacher_disagreement_score":0.46604073,"about_ca_system_score_codex":0.0000032231208,"about_ca_system_score_gemma":0.000030683583,"threshold_uncertainty_score":0.5193854},"labels":[],"label_agreement":null},{"id":"W1985475058","doi":"10.1172/jci17490","title":"The role of falling leptin levels in the neuroendocrine and metabolic adaptation to short-term starvation in healthy men","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Regulation of Appetite and Obesity","field":"Neuroscience","cited_by":575,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Nutrition, Metabolism and Diabetes","funders":"National Center for Research Resources; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; National Institutes of Health; Deutsches Krebsforschungszentrum; U.S. Public Health Service; Amgen","keywords":"Leptin; Endocrinology; Internal medicine; Hypothalamic–pituitary–thyroid axis; Starvation; Hormone; Medicine; Leptin receptor; Hypothalamus; Appetite; Obesity; Adipokine; Biology; Thyroid hormones","score_opus":0.14638553663737336,"score_gpt":0.3830263003065387,"score_spread":0.23664076366916537,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1985475058","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954097,0.00010389041,0.00023152049,0.0038010858,0.000096848285,0.00020899581,8.191109e-7,0.000002242034,0.0001448882],"genre_scores_gemma":[0.99799454,0.0003715999,0.00070601754,0.0008454304,0.00006672616,0.0000027819542,3.653018e-7,0.000004785493,0.000007770872],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99707526,0.0010456896,0.0012518992,0.00013169234,0.00037391108,0.000121575256],"domain_scores_gemma":[0.99767464,0.0015292758,0.0005135445,0.00011460727,0.00009035065,0.00007758579],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0030769662,0.00006972937,0.00021158472,0.00011605025,0.00007537334,0.000044752545,0.00015417841,0.000029635952,0.0000021882297],"category_scores_gemma":[0.0044464148,0.000043907246,0.00004891047,0.00037396126,0.00010442218,0.0003101923,0.00001347695,0.00028389052,9.3605695e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007055538,0.00032649585,0.678948,0.000030123167,0.000010928824,0.000019241712,0.0049219257,0.013616664,0.14101295,0.058648456,0.00007674135,0.10168295],"study_design_scores_gemma":[0.0005540715,0.0003348801,0.93101525,0.00004229727,0.000008301765,0.000015578395,0.0004965732,0.0045531467,0.044554688,0.016694624,0.0016772238,0.000053365562],"about_ca_topic_score_codex":0.000018745184,"about_ca_topic_score_gemma":0.000102111575,"teacher_disagreement_score":0.25206727,"about_ca_system_score_codex":0.000012807433,"about_ca_system_score_gemma":0.000105078536,"threshold_uncertainty_score":0.5323095},"labels":[],"label_agreement":null},{"id":"W1986038834","doi":"10.1172/jci18397","title":"Salt-sensitive hypertension: if only it were as simple as rocket science","year":2003,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Sodium Intake and Health","field":"Nursing","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute","funders":"","keywords":"Salt (chemistry); Rocket (weapon); Reading (process); Population; Medicine; Psychology; History; Aeronautics; Political science; Chemistry; Environmental health; Engineering; Law","score_opus":0.13466247582160018,"score_gpt":0.4164070005046438,"score_spread":0.2817445246830436,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1986038834","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.32494187,0.000084909654,0.000018972049,0.6655452,0.006874397,0.00024974075,0.000008268909,0.000027164391,0.0022494078],"genre_scores_gemma":[0.080874555,0.00013197518,0.0014684243,0.90323764,0.013535575,0.0000015088704,0.00004538239,0.000068245485,0.0006366977],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9923046,0.0010411697,0.0033522667,0.0006349799,0.0019879793,0.0006790068],"domain_scores_gemma":[0.990231,0.0026079414,0.003773262,0.00054241705,0.002126948,0.00071844994],"candidate_categories":["metaresearch","metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.0051328884,0.00041823476,0.0014329088,0.0004826258,0.00046643245,0.00022090746,0.0005775198,0.0014053517,0.00019966651],"category_scores_gemma":[0.01405786,0.0003510313,0.00058793457,0.0005841419,0.0012159579,0.00070738036,0.00006401817,0.0060417177,0.0005221815],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025326238,0.000061233266,0.0012533905,0.00006689779,0.000044224573,0.0006111923,0.00024277176,0.000007313847,0.000195514,0.000041802494,0.9896759,0.007546526],"study_design_scores_gemma":[0.0014456663,0.0028192995,0.0092441095,0.000921268,0.00039261283,0.0029964354,0.00033490927,0.00017631934,0.002817989,0.028036628,0.95026886,0.0005458984],"about_ca_topic_score_codex":0.00019739398,"about_ca_topic_score_gemma":0.000025355128,"teacher_disagreement_score":0.24406733,"about_ca_system_score_codex":0.0003492883,"about_ca_system_score_gemma":0.004166903,"threshold_uncertainty_score":0.99989414},"labels":[],"label_agreement":null},{"id":"W1986580482","doi":"10.1172/jci33612","title":"Building bone to reverse osteoporosis and repair fractures","year":2008,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Bone Metabolism and Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":349,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Nutrition, Metabolism and Diabetes","funders":"National Institute of Dental and Craniofacial Research; National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute on Aging; National Institutes of Health","keywords":"Osteoporosis; Medicine; Bone healing; Anabolic Agents; Bone morphogenetic protein; Bone morphogenetic protein 7; Teriparatide; Bone morphogenetic protein 2; Anabolism; Bone Density Conservation Agents; Bone remodeling; Bioinformatics; Surgery; Bone mineral; Internal medicine; Biology","score_opus":0.07243970498226485,"score_gpt":0.41710231253691926,"score_spread":0.3446626075546544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1986580482","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.016762687,0.98233247,0.000072660056,0.00014290617,0.00046637165,0.00017493076,0.000017666402,0.0000062166964,0.00002407381],"genre_scores_gemma":[0.00013292284,0.9831985,0.013336213,0.0012822172,0.0019086277,0.0000043955097,0.000029731376,0.000025570429,0.00008179215],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99737376,0.0003480051,0.0016517551,0.00028000007,0.00021706679,0.00012939693],"domain_scores_gemma":[0.9975981,0.00015748043,0.0013510243,0.00025254357,0.00018138078,0.00045943895],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000789857,0.00022106101,0.0012017082,0.00010754008,0.00005427297,0.00002375633,0.00014025626,0.00043867654,0.0000064036662],"category_scores_gemma":[0.004275331,0.00016536568,0.00082956336,0.00011494761,0.00014601373,0.000010273883,0.0000963452,0.00033579173,0.000004345368],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009484361,0.00009369737,0.00038394437,0.0016282919,0.00030181647,0.000054615037,0.000025633555,0.0000065775334,0.00020985081,0.00004587978,0.13103594,0.8661189],"study_design_scores_gemma":[0.0002632993,0.00026922493,0.0005568948,0.0016994113,0.00050620135,0.00018952292,0.000005097767,6.103304e-7,0.00007497583,0.00013591672,0.9961211,0.00017771727],"about_ca_topic_score_codex":0.000005240777,"about_ca_topic_score_gemma":0.0000018735309,"teacher_disagreement_score":0.86594117,"about_ca_system_score_codex":0.000007770903,"about_ca_system_score_gemma":0.00046413217,"threshold_uncertainty_score":0.6743417},"labels":[],"label_agreement":null},{"id":"W1986774614","doi":"10.1172/jci46322","title":"Angiopoietin-1 is essential in mouse vasculature during development and in response to injury","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Lipid metabolism and disorders","field":"Medicine","cited_by":449,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto; Toronto Centre for Phenogenomics; St. Michael's Hospital; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Banting and Best Diabetes Centre, University of Toronto; Canadian Institutes of Health Research; National Institutes of Health; University of Toronto; Synchrotron Light Research Institute; Wenner-Gren Foundation","keywords":"Angiopoietin receptor; Knockout mouse; Pericyte; Angiogenesis; Angiopoietin; Phenotype; Conditional gene knockout; Biology; Cell biology; Gene knockout; Fibrosis; Gene targeting; Immunology; Cancer research; Pathology; Gene; Medicine; Endothelial stem cell; Genetics; Vascular endothelial growth factor; In vitro","score_opus":0.05535281909641087,"score_gpt":0.34858220597395406,"score_spread":0.2932293868775432,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1986774614","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99796337,0.00013825207,0.000016380869,0.0014865444,0.00020755618,0.00013274793,6.161104e-7,0.0000045174065,0.000050004925],"genre_scores_gemma":[0.9885083,0.00007278213,0.009752404,0.0013466717,0.00018212112,0.000002007219,7.269215e-7,0.000009068214,0.00012592124],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99824154,0.000187434,0.0010770613,0.00013317916,0.0002359513,0.00012482707],"domain_scores_gemma":[0.99917614,0.00009424589,0.00024700424,0.00010194146,0.00010259699,0.0002780735],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002224498,0.00008395628,0.00035784935,0.00030378133,0.000016895474,0.000009335085,0.00005515137,0.00013971495,0.000024963763],"category_scores_gemma":[0.002035051,0.00006834908,0.00007630376,0.00021958425,0.0000665259,0.00016909708,0.000032371314,0.00036178002,0.0000053516906],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010343349,0.0002888794,0.9482566,0.00006449309,0.000042526266,0.0000667975,0.008775795,0.0000057193365,0.028292466,0.00002664232,0.0003756948,0.0034610454],"study_design_scores_gemma":[0.0027002685,0.00014700026,0.9646003,0.000182693,0.000023261784,0.000015160334,0.00020619895,0.000007792575,0.030950457,0.00024234517,0.0008524521,0.00007206753],"about_ca_topic_score_codex":0.000013810248,"about_ca_topic_score_gemma":0.00001732865,"teacher_disagreement_score":0.016343711,"about_ca_system_score_codex":0.000023714441,"about_ca_system_score_gemma":0.00028386572,"threshold_uncertainty_score":0.27871946},"labels":[],"label_agreement":null},{"id":"W1987191514","doi":"10.1172/jci57850","title":"The maternal immune response to fetal platelet GPIbα causes frequent miscarriage in mice that can be prevented by intravenous IgG and anti-FcRn therapies","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Platelet Disorders and Treatments","field":"Medicine","cited_by":90,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; McMaster University; Canadian Blood Services; University of Toronto","funders":"Canadian Institutes of Health Research; National Institutes of Health; University of Toronto; Canadian Blood Services; National Heart, Lung, and Blood Institute; Heart and Stroke Foundation of Canada","keywords":"Antibody; Platelet; Immunology; Immune system; Medicine; Fetus; Miscarriage; Biology; Pregnancy","score_opus":0.06504925598589575,"score_gpt":0.3337675421817897,"score_spread":0.268718286195894,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987191514","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9910886,0.0011524416,0.000011891068,0.0071381996,0.00024694164,0.00030386547,0.000017305778,0.000007865587,0.000032857573],"genre_scores_gemma":[0.9971888,0.001077863,0.0006017165,0.00090300513,0.00006027493,0.000005096733,0.0000075410558,0.000016979517,0.00013872363],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979116,0.00041145508,0.0010235326,0.00015842389,0.00029033862,0.00020465544],"domain_scores_gemma":[0.9984711,0.00047173977,0.00055081403,0.000140886,0.000098857134,0.00026663535],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017505,0.00015142724,0.00051776285,0.000093569106,0.000084770196,0.000040453386,0.00011947869,0.00012530992,0.000020432368],"category_scores_gemma":[0.0006982209,0.000095176336,0.00011065794,0.00010065631,0.00020688583,0.00012529438,0.000026794576,0.00037177576,0.0000026522953],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.019902335,0.0015054399,0.7634515,0.00007999815,0.0015580673,0.0029512574,0.010595607,0.000007308602,0.16527931,0.00007018649,0.0021644072,0.032434545],"study_design_scores_gemma":[0.0047091055,0.0017978603,0.94258666,0.00035251357,0.000119870034,0.0005894993,0.0005788463,0.00002729562,0.046955463,0.0012778823,0.0008797226,0.00012525909],"about_ca_topic_score_codex":0.0004473595,"about_ca_topic_score_gemma":0.00016797196,"teacher_disagreement_score":0.17913516,"about_ca_system_score_codex":0.0000474218,"about_ca_system_score_gemma":0.00015919906,"threshold_uncertainty_score":0.38811785},"labels":[],"label_agreement":null},{"id":"W1989188472","doi":"10.1172/jci43615","title":"Dual elimination of the glucagon and GLP-1 receptors in mice reveals plasticity in the incretin axis","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Diabetes Treatment and Management","field":"Medicine","cited_by":107,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"Canadian Institutes of Health Research","keywords":"Glucagon receptor; Internal medicine; Endocrinology; Incretin; Glucose homeostasis; Glucagon; Receptor; Glucagon-like peptide 1 receptor; Biology; Glucagon-like peptide-1; Agonist; Insulin; Type 2 diabetes; Diabetes mellitus; Insulin resistance; Medicine","score_opus":0.0892509425484842,"score_gpt":0.3407440297576234,"score_spread":0.2514930872091392,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1989188472","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99592096,0.000049526257,0.000009538128,0.0030515047,0.00018902833,0.00023270358,6.044824e-7,0.0000016830086,0.00054446113],"genre_scores_gemma":[0.9981893,0.000102324804,0.0009608614,0.0005972491,0.00009630986,0.000002886422,0.0000015529511,0.0000039036386,0.000045664365],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982631,0.0003726807,0.0009502728,0.000080446865,0.00025498818,0.00007848966],"domain_scores_gemma":[0.9985221,0.00060850196,0.000645791,0.00007831482,0.000093654744,0.00005164335],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024741478,0.00006543729,0.0002620228,0.00009621958,0.000019326113,0.000007956943,0.00007981106,0.00007483299,0.000014661237],"category_scores_gemma":[0.002828839,0.000034974775,0.00007200486,0.00020388936,0.0001983568,0.000115151546,0.000027578222,0.00026353044,0.0000012084163],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035202398,0.00037670173,0.9827303,0.00007269093,0.00004876549,0.000009371197,0.0029294412,0.0000045136526,0.0013502475,0.001247824,0.0009783024,0.0098997615],"study_design_scores_gemma":[0.0014691798,0.0006884481,0.99040663,0.00036013703,0.00011900475,0.0000049318724,0.00038596927,0.00009388145,0.0030420967,0.0031865805,0.00021073586,0.000032387892],"about_ca_topic_score_codex":0.000052498664,"about_ca_topic_score_gemma":0.00005684056,"teacher_disagreement_score":0.009867373,"about_ca_system_score_codex":0.000028380542,"about_ca_system_score_gemma":0.00006081865,"threshold_uncertainty_score":0.3386589},"labels":[],"label_agreement":null},{"id":"W1989273697","doi":"10.1172/jci32103","title":"Adoptive transfer of effector CD8+ T cells derived from central memory cells establishes persistent T cell memory in primates","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"CAR-T cell therapy research","field":"Medicine","cited_by":835,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; School of Medicine, Stanford University; National Heart, Lung, and Blood Institute; School of Medicine, Oregon Health and Science University; National Cancer Institute; National Institutes of Health; National Center for Research Resources; Cancer Research Institute","keywords":"Adoptive cell transfer; Cytotoxic T cell; Biology; CD8; Effector; Immunology; T cell; Immunotherapy; Antigen; Cell biology; Immune system; In vitro; Genetics","score_opus":0.07917265780015434,"score_gpt":0.3354791466112934,"score_spread":0.25630648881113904,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1989273697","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969844,0.0005033549,0.00009851745,0.0005403641,0.00066301733,0.0005425514,0.000019112082,0.000011952197,0.0006367349],"genre_scores_gemma":[0.9943975,0.0011090956,0.0030932701,0.00033935052,0.0005977594,0.0000040605532,0.000019290668,0.000036222104,0.0004034417],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9955803,0.00072510535,0.002087693,0.00029081877,0.0009518571,0.0003641894],"domain_scores_gemma":[0.9961279,0.0019464025,0.00055531727,0.00027611168,0.0005034066,0.00059086876],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017258461,0.00022711344,0.0011266329,0.00025603242,0.000044067845,0.000018561544,0.0002303376,0.00030305627,0.000809481],"category_scores_gemma":[0.0006313491,0.00018567832,0.00075380737,0.00023938558,0.0006549574,0.00029621008,0.000030650153,0.0010846966,0.000016662578],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00207448,0.0007062325,0.04299587,0.00019108572,0.00017970176,0.00018297408,0.0026780325,0.00065917015,0.9481181,0.0000012434574,0.00067076954,0.0015423642],"study_design_scores_gemma":[0.0060269753,0.0017284831,0.15562727,0.0003859039,0.00021220345,0.000027511946,0.00061812147,0.00076470966,0.83428115,0.000045132474,0.00013368396,0.0001488735],"about_ca_topic_score_codex":0.00016047127,"about_ca_topic_score_gemma":0.000017770795,"teacher_disagreement_score":0.11383694,"about_ca_system_score_codex":0.00017483241,"about_ca_system_score_gemma":0.0008389903,"threshold_uncertainty_score":0.88632494},"labels":[],"label_agreement":null},{"id":"W1989532668","doi":"10.1172/jci10720","title":"The discoidin domain receptor tyrosine kinase DDR1 in arterial wound repair","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cell Adhesion Molecules Research","field":"Medicine","cited_by":220,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; University of Toronto","funders":"Medical Research Council; Deutsche Forschungsgemeinschaft; Medical Research Council Canada; Heart and Stroke Foundation of Canada","keywords":"DDR1; Discoidin domain; Neointima; Receptor tyrosine kinase; Vascular smooth muscle; Cell biology; Biology; Receptor; Tyrosine kinase; Kinase; Signal transduction; Endocrinology; Internal medicine; Medicine; Biochemistry; Smooth muscle","score_opus":0.09035967827613907,"score_gpt":0.4106547178515482,"score_spread":0.32029503957540917,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1989532668","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9820747,0.00021276361,0.00019572466,0.016160525,0.0006977515,0.00025031375,0.0000010986521,0.000012912156,0.00039425798],"genre_scores_gemma":[0.9723368,0.001508406,0.017585149,0.0019214211,0.0039728764,0.000011146003,0.000018021123,0.000042991334,0.0026031884],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99638325,0.0006457561,0.0018501462,0.00017314444,0.00070989545,0.00023783563],"domain_scores_gemma":[0.99726903,0.0011661228,0.0005895249,0.00027742592,0.00029328724,0.00040460535],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0052549,0.00011084786,0.00041466436,0.00013761481,0.00008731234,0.000056567205,0.00016204274,0.0001652462,0.00017013238],"category_scores_gemma":[0.0064567025,0.00006825563,0.00028973995,0.00039886768,0.00041397224,0.00015684494,0.00004724179,0.00091525324,0.000064267115],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0135188345,0.0019915982,0.43094844,0.00010604936,0.0002686319,0.0019886743,0.0006270644,0.000038807706,0.27576327,0.0016014073,0.10659091,0.16655628],"study_design_scores_gemma":[0.011328442,0.004855003,0.66847074,0.00085125037,0.00011177669,0.0005135121,0.0005651841,0.0016876734,0.009567543,0.018838985,0.2828987,0.00031120863],"about_ca_topic_score_codex":0.000014409345,"about_ca_topic_score_gemma":0.000034129895,"teacher_disagreement_score":0.26619574,"about_ca_system_score_codex":0.000112957205,"about_ca_system_score_gemma":0.0004434188,"threshold_uncertainty_score":0.77297425},"labels":[],"label_agreement":null},{"id":"W1990375242","doi":"10.1172/jci9871","title":"Reovirus as a novel oncolytic agent","year":2000,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":121,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Medical Research Council; Natural Sciences and Engineering Research Council of Canada; Medical Research Council Canada; Fondation pour la Recherche Médicale","keywords":"Oncolytic virus; Biology; Carcinogenesis; Cancer cell; Virology; Cancer; In vivo; In vitro; Cancer research; Virus; Genetics","score_opus":0.10689183105527948,"score_gpt":0.4309146649130977,"score_spread":0.3240228338578182,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990375242","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99660176,0.00028152592,0.00007924661,0.0009457551,0.00026430545,0.0001004417,0.0000024964606,0.000003835313,0.001720637],"genre_scores_gemma":[0.99067366,0.00082748116,0.0012062562,0.0031076178,0.0019005891,0.000003054791,0.000011287359,0.000020728392,0.0022493016],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981551,0.00022015229,0.0009278485,0.00017257823,0.00035918423,0.00016511083],"domain_scores_gemma":[0.9987152,0.00007835463,0.0003522999,0.00023822775,0.0003181874,0.00029768673],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019169284,0.00009924329,0.00023031124,0.000048307385,0.00004665614,0.00002499626,0.00024072353,0.00018420494,0.00033158387],"category_scores_gemma":[0.0014999778,0.00008390861,0.00022988123,0.00011322553,0.00017945011,0.000009782324,0.000023639743,0.00031416226,0.00012007243],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007162929,0.0004732857,0.0064522326,0.000017078435,0.00026009843,0.000027149215,0.000093671886,0.0010276976,0.8536067,0.00005194199,0.0103794,0.120447785],"study_design_scores_gemma":[0.007019462,0.023353236,0.01842798,0.0001420174,0.00010903019,0.00016296569,0.00005206116,0.0004933992,0.6634527,0.0027936648,0.2835452,0.00044827966],"about_ca_topic_score_codex":0.000007207287,"about_ca_topic_score_gemma":0.000017375954,"teacher_disagreement_score":0.27316582,"about_ca_system_score_codex":0.000020919066,"about_ca_system_score_gemma":0.0005647074,"threshold_uncertainty_score":0.3630611},"labels":[],"label_agreement":null},{"id":"W1990406538","doi":"10.1172/jci40839","title":"Pathogenic antibodies are active participants in spinal cord injury","year":2009,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Neuroinflammation and Neurodegeneration Mechanisms","field":"Neuroscience","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Robarts Clinical Trials; Western University","funders":"","keywords":"Neuroprotection; Pathogenesis; Autoimmunity; Spinal cord injury; Medicine; Antibody; Spinal cord; Immunology; Lesion; Disease; Mechanism (biology); Neuroscience; Bioinformatics; Pathology; Biology; Internal medicine","score_opus":0.25220949279824617,"score_gpt":0.43146206431941914,"score_spread":0.17925257152117297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990406538","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.77448404,0.00002240878,0.000053886197,0.22289959,0.0021457768,0.00026001327,0.000024252731,0.000030866886,0.00007914264],"genre_scores_gemma":[0.30647516,0.0005430162,0.0005011833,0.6868675,0.0051746727,0.000006388214,0.000011830872,0.000048928854,0.00037134092],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99325716,0.0018951377,0.0029737705,0.00050852506,0.0009772863,0.0003881195],"domain_scores_gemma":[0.9941713,0.00078404887,0.0042508948,0.00030974537,0.00026225686,0.0002217244],"candidate_categories":["metaresearch","metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0013244227,0.00032488265,0.00094067305,0.00047584408,0.00009412629,0.000121042474,0.00045090343,0.00064832927,0.000044664626],"category_scores_gemma":[0.0090268245,0.00028642497,0.00038538524,0.00039978526,0.00022938645,0.0005864637,0.000047786245,0.0035067827,0.000068144196],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025867138,0.00028721185,0.0013591524,0.00014160211,0.000029962941,0.0043753246,0.000110775436,0.000081295315,0.4492042,0.0004780592,0.49207538,0.049270295],"study_design_scores_gemma":[0.0024581752,0.007208322,0.048786547,0.0013258895,0.00019546712,0.00027548245,0.000032181975,0.0008036516,0.81495637,0.022898987,0.10008063,0.0009782685],"about_ca_topic_score_codex":9.0649525e-7,"about_ca_topic_score_gemma":0.000003943767,"teacher_disagreement_score":0.4680089,"about_ca_system_score_codex":0.00005914138,"about_ca_system_score_gemma":0.000397638,"threshold_uncertainty_score":0.9999588},"labels":[],"label_agreement":null},{"id":"W1990714106","doi":"10.1172/jci41681","title":"LXRβ is required for glucocorticoid-induced hyperglycemia and hepatosteatosis in mice","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cholesterol and Lipid Metabolism","field":"Medicine","cited_by":116,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; Canadian Institutes of Health Research; Welch Foundation; University of Toronto; Howard Hughes Medical Institute","keywords":"Liver X receptor; Glucocorticoid receptor; Endocrinology; Glucocorticoid; Internal medicine; Dexamethasone; Hyperinsulinemia; Steatosis; Transactivation; Biology; Nuclear receptor; Insulin resistance; Diabetes mellitus; Medicine; Gene expression; Transcription factor; Biochemistry","score_opus":0.09108783566632311,"score_gpt":0.39048727659482624,"score_spread":0.2993994409285031,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990714106","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99048275,0.00008379684,0.000029303608,0.0077221654,0.0013046595,0.00028754445,0.0000021340493,0.000006553714,0.00008107433],"genre_scores_gemma":[0.9898576,0.00009815496,0.0044744075,0.0041079787,0.0013263709,0.000004683278,0.000002817827,0.000015443777,0.00011254081],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99797636,0.000068455134,0.0014115468,0.00017115324,0.00023091816,0.00014158971],"domain_scores_gemma":[0.9980798,0.00053912686,0.0006544459,0.00014830651,0.00026420437,0.00031414357],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015409866,0.00010713034,0.0005929373,0.00013251211,0.000023507697,0.00002272627,0.00007042659,0.00025688214,0.000013468406],"category_scores_gemma":[0.0033688687,0.0000837534,0.00018195638,0.00013621387,0.00009700705,0.00022863391,0.000018668658,0.00066577434,0.000005184794],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008081942,0.00013271102,0.53094697,0.00009041353,0.0000466823,0.000007730036,0.00037345442,6.4768216e-7,0.43885356,0.0001716631,0.00061932625,0.027948657],"study_design_scores_gemma":[0.010452151,0.0010310182,0.92750114,0.0003045889,0.00027047753,0.00018876753,0.00009607434,0.0015029751,0.047615927,0.0020810468,0.008811895,0.00014391857],"about_ca_topic_score_codex":0.000016148324,"about_ca_topic_score_gemma":0.000022002056,"teacher_disagreement_score":0.3965542,"about_ca_system_score_codex":0.000012560228,"about_ca_system_score_gemma":0.0002608386,"threshold_uncertainty_score":0.40330938},"labels":[],"label_agreement":null},{"id":"W1990753699","doi":"10.1172/jci40794","title":"Loss of enteroendocrine cells in mice alters lipid absorption and glucose homeostasis and impairs postnatal survival","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":114,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Centre National de la Recherche Scientifique; Université de Strasbourg; Institute of Genetics; Fondation pour la Recherche Médicale; Institut National de la Santé et de la Recherche Médicale; Agence Nationale de la Recherche; European Commission","keywords":"Enteroendocrine cell; Homeostasis; Endocrinology; Biology; Internal medicine; Hormone; Intestinal epithelium; Energy homeostasis; Glucose homeostasis; Endocrine system; Epithelium; Cell biology; Insulin; Medicine; Insulin resistance","score_opus":0.034018396515408736,"score_gpt":0.3292134940903333,"score_spread":0.29519509757492457,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990753699","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972971,0.00023357075,0.00002023504,0.001555328,0.00074188353,0.00009587248,0.0000063586126,0.0000046718783,0.00004495109],"genre_scores_gemma":[0.9966154,0.0009478064,0.0017226987,0.00036134236,0.00032016766,6.447229e-7,0.000006102992,0.000007316385,0.000018527871],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99842596,0.00011119742,0.0010253554,0.00011609781,0.0002179733,0.0001034415],"domain_scores_gemma":[0.99831593,0.0005911247,0.00056048407,0.00008245137,0.00017558808,0.00027440244],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001167631,0.00008849742,0.00045199433,0.00016250642,0.000014618419,0.000012468382,0.000036791316,0.000083671635,0.000027590564],"category_scores_gemma":[0.0016986118,0.00007019408,0.00008396592,0.00010578026,0.00028358502,0.0001915463,0.000020297864,0.00042258188,0.0000018280502],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00085060176,0.00020953445,0.7074608,0.00014827293,0.00006714527,0.000040844134,0.00018303536,0.000003624586,0.282045,0.000078434496,0.00032489386,0.008587788],"study_design_scores_gemma":[0.005211724,0.0011625842,0.9000395,0.00023698936,0.00012695928,0.00020474308,0.00017872553,0.0005299282,0.09157075,0.00034935874,0.0003102216,0.00007853646],"about_ca_topic_score_codex":0.000030596944,"about_ca_topic_score_gemma":0.00001379572,"teacher_disagreement_score":0.19257866,"about_ca_system_score_codex":0.0000110545725,"about_ca_system_score_gemma":0.000085480824,"threshold_uncertainty_score":0.28624314},"labels":[],"label_agreement":null},{"id":"W1991680301","doi":"10.1172/jci40256","title":"Genomic amplicons target vesicle recycling in breast cancer","year":2009,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; Ontario Institute for Cancer Research","funders":"University of Texas MD Anderson Cancer Center; National Cancer Institute; Genome Canada","keywords":"Rab; Amplicon; Biology; Cancer research; Breast cancer; Carcinogenesis; Cancer; Endocytosis; GTPase; Metastasis; Cell biology; Bioinformatics; Genetics; Receptor; Gene","score_opus":0.12428894540841819,"score_gpt":0.4300942375831218,"score_spread":0.30580529217470365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991680301","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33458698,0.000693862,0.000008638606,0.66371524,0.0005014921,0.00016022284,0.00003174233,0.000006910236,0.0002948983],"genre_scores_gemma":[0.017424578,0.003758162,0.0040282886,0.94384015,0.028137736,0.0000066888915,0.000115672956,0.00005910806,0.0026296119],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9956875,0.000397978,0.0024608837,0.00029134937,0.00077891303,0.00038341127],"domain_scores_gemma":[0.99692285,0.0007926704,0.0012935753,0.00021504558,0.00043300338,0.00034288078],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0019019659,0.0002444367,0.00121022,0.00035806335,0.00004814672,0.000041015952,0.00025281488,0.00083150406,0.00030460692],"category_scores_gemma":[0.00060281187,0.00018621181,0.00053053733,0.0002497539,0.00027584872,0.00014439452,0.000041990806,0.0053085047,0.00004307491],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00049411587,0.00010004587,0.2218321,0.00017938617,0.00015286049,0.0010587688,0.000046398647,0.00003907917,0.0012317052,0.000013308437,0.764097,0.010755275],"study_design_scores_gemma":[0.0014214064,0.0003904121,0.6044889,0.0014621118,0.00013065126,0.00058436027,0.000006327114,0.00028092254,0.00014337845,0.004035859,0.38685554,0.00020009813],"about_ca_topic_score_codex":0.00022057668,"about_ca_topic_score_gemma":0.000010908943,"teacher_disagreement_score":0.38265684,"about_ca_system_score_codex":0.00017086709,"about_ca_system_score_gemma":0.0013179327,"threshold_uncertainty_score":0.99698627},"labels":[],"label_agreement":null},{"id":"W1992901332","doi":"10.1172/jci28377","title":"Twenty-first century plague The story of SARS","year":2006,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"History of Science and Medicine","field":"Arts and Humanities","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Plague (disease); Virology; Coronavirus disease 2019 (COVID-19); Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); 2019-20 coronavirus outbreak; Pandemic; History; Biology; Medicine; Ancient history; Outbreak; Infectious disease (medical specialty); Pathology","score_opus":0.1171518659521043,"score_gpt":0.330605077151685,"score_spread":0.21345321119958072,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1992901332","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9782316,0.0005208496,0.000017683571,0.008760911,0.0028635864,0.000060274935,0.000002217925,0.0000053518706,0.009537508],"genre_scores_gemma":[0.99420375,0.00010051664,0.00011061136,0.0010606782,0.002936284,4.66679e-7,0.0000018048637,0.0000043858813,0.0015815044],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984581,0.00014084492,0.00088079885,0.00006419839,0.00037029604,0.0000857713],"domain_scores_gemma":[0.99822146,0.00044148715,0.0009279781,0.000095350595,0.00023908845,0.00007465919],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002686708,0.000057350266,0.00022367384,0.00006721678,0.00022073516,0.000017386443,0.00018115356,0.000040111718,0.00014293085],"category_scores_gemma":[0.00060174026,0.00003276697,0.00014153527,0.000035409863,0.001410335,0.0002514099,0.000009330536,0.00037212114,0.000013687479],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014703904,0.0003952344,0.020645892,0.000085136395,0.00007382396,0.000021536198,0.03109589,0.00021779696,0.001246802,0.12366944,0.80731,0.01509144],"study_design_scores_gemma":[0.00047521436,0.00029417608,0.022891449,0.00012821736,0.000049885115,0.0000054070138,0.0018081231,0.00003718124,0.00013541435,0.0039634104,0.97015965,0.000051844323],"about_ca_topic_score_codex":0.00007663932,"about_ca_topic_score_gemma":0.00026875548,"teacher_disagreement_score":0.16284971,"about_ca_system_score_codex":0.000020437807,"about_ca_system_score_gemma":0.00013971652,"threshold_uncertainty_score":0.5196438},"labels":[],"label_agreement":null},{"id":"W1992971293","doi":"10.1172/jci58705","title":"Signaling at neuro/immune synapses","year":2012,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Neuroinflammation and Neurodegeneration Mechanisms","field":"Neuroscience","cited_by":89,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; National Eye Institute; School of Medicine, New York University; York University","keywords":"Neuroscience; Synapse; Immunological synapse; Biology; Immune system; Immunology; T cell; T-cell receptor","score_opus":0.36968888827985036,"score_gpt":0.43603656691616566,"score_spread":0.0663476786363153,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1992971293","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0057057263,0.9846389,0.0003118135,0.00044395012,0.007871467,0.0006375261,0.000016612796,0.00009060986,0.00028339337],"genre_scores_gemma":[0.00062609324,0.99447274,0.0005679918,0.0014026283,0.0022090576,0.000008192853,0.000010352595,0.00007853149,0.0006244383],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9906868,0.002832572,0.004929712,0.00041932752,0.0008305263,0.00030111562],"domain_scores_gemma":[0.9874359,0.004840134,0.0066393013,0.00039867,0.00018596827,0.00050004787],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.002683003,0.00040783396,0.0020037887,0.00034834622,0.00020364666,0.000117172895,0.00060273864,0.0004179695,0.0002571692],"category_scores_gemma":[0.010938191,0.00031072527,0.0012609126,0.00045850372,0.00021031112,0.00058508944,0.00014643274,0.001353589,0.00043742073],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000073228584,0.00026506686,0.000024337609,0.004105637,0.00007846496,0.00024130884,0.00008643452,0.00007642141,0.05243615,0.006230008,0.0023920971,0.93399084],"study_design_scores_gemma":[0.00035029344,0.00025862805,0.0000069072476,0.0018830155,0.00064499036,0.0007493827,0.0000015502161,0.000053339172,0.036611836,0.00048668857,0.95864004,0.00031334558],"about_ca_topic_score_codex":2.4934465e-7,"about_ca_topic_score_gemma":3.0843242e-7,"teacher_disagreement_score":0.9562479,"about_ca_system_score_codex":0.00006463951,"about_ca_system_score_gemma":0.00041564603,"threshold_uncertainty_score":0.9999345},"labels":[],"label_agreement":null},{"id":"W1993573575","doi":"10.1172/jci8592","title":"High-level expression of Egr-1 and Egr-1–inducible genes in mouse and human atherosclerosis","year":2000,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Nuclear Receptors and Signaling","field":"Neuroscience","cited_by":298,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto","funders":"National Heart, Lung, and Blood Institute; National Institute on Aging; National Institutes of Health","keywords":"Biology; Gene expression; Lesion; Inflammation; Fibrous cap; Cell biology; Gene; Vascular smooth muscle; Molecular biology; Pathology; Endocrinology; Immunology; Medicine","score_opus":0.2051034322134506,"score_gpt":0.36824249383445734,"score_spread":0.16313906162100675,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1993573575","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99949974,0.00005422594,0.000015459602,0.00021961979,0.000095794654,0.00006190132,0.000003314482,0.0000051683846,0.000044800447],"genre_scores_gemma":[0.9967664,0.0005729583,0.0021035702,0.00022691437,0.00013182209,5.7822075e-7,3.6400732e-7,0.000011972692,0.00018541035],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99819416,0.00028464003,0.0009990241,0.00017941596,0.00023935203,0.000103411796],"domain_scores_gemma":[0.99886817,0.0003420369,0.0005027093,0.00009616036,0.000043635857,0.0001472724],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010622572,0.00008624515,0.00032442634,0.00008465755,0.00007011204,0.00003787352,0.000104972736,0.0001173511,0.00011085152],"category_scores_gemma":[0.0005499325,0.00006757816,0.000058476802,0.0001090618,0.00025113678,0.0003246553,0.000027320522,0.0002747045,0.000002212237],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043144348,0.0000713879,0.042276688,0.000013232039,0.0000017992581,0.0000014254294,0.00018984471,0.00007274944,0.9490137,0.00030227314,0.00008045324,0.00793327],"study_design_scores_gemma":[0.0011482859,0.00038677963,0.11463036,0.00024558627,0.000010719484,0.000007903607,0.000038924743,0.00014251797,0.8791985,0.0038374744,0.0002589198,0.00009402219],"about_ca_topic_score_codex":0.00004303807,"about_ca_topic_score_gemma":0.0000054259017,"teacher_disagreement_score":0.07235367,"about_ca_system_score_codex":0.00000915411,"about_ca_system_score_gemma":0.00002918837,"threshold_uncertainty_score":0.27557573},"labels":[],"label_agreement":null},{"id":"W1993971647","doi":"10.1172/jci32108","title":"Geranylgeranyltransferase I as a target for anti-cancer drugs","year":2007,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"School of Medicine, New York University; York University","keywords":"Farnesyltransferase; Prenylation; Gene; Druggability; Enzyme; Amino acid; GTPase; Cancer research; Biology; Cysteine; Biochemistry; Chemistry","score_opus":0.13099600877447048,"score_gpt":0.45102854811761106,"score_spread":0.3200325393431406,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1993971647","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.002832624,0.9854628,0.009414332,0.00015267571,0.0012917111,0.000697289,0.00005650358,0.0000053192925,0.00008675546],"genre_scores_gemma":[0.00011446653,0.9858771,0.008905032,0.0005756294,0.0038572333,0.00004619347,0.00010177905,0.00006452827,0.000458063],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99612474,0.00043369047,0.0025448254,0.0003402396,0.00031061764,0.00024587577],"domain_scores_gemma":[0.9967809,0.00042328896,0.0018178569,0.00026770387,0.00039766452,0.0003126343],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0040074154,0.0003269442,0.0016711933,0.00013014088,0.00006782278,0.00004171309,0.00036890918,0.00095335767,0.00005232543],"category_scores_gemma":[0.0014163377,0.00024871394,0.0017029212,0.00011941633,0.00012992325,0.000010846931,0.0000239865,0.00043967963,0.0000113490305],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013958786,0.000079054254,0.000013273909,0.0023317959,0.00047478604,0.0000056865883,0.00001417649,0.0000040054433,0.0032911692,0.00013897283,0.0021427993,0.9913647],"study_design_scores_gemma":[0.00063906075,0.0007946147,0.0000020004954,0.0029009355,0.0005541419,0.000033477598,0.000004812092,0.0000020226732,0.016785633,0.0013545312,0.97665006,0.0002787142],"about_ca_topic_score_codex":0.0000026101584,"about_ca_topic_score_gemma":7.0982753e-7,"teacher_disagreement_score":0.991086,"about_ca_system_score_codex":0.000019400693,"about_ca_system_score_gemma":0.0010818458,"threshold_uncertainty_score":0.9999965},"labels":[],"label_agreement":null},{"id":"W1994259848","doi":"10.1172/jci33375","title":"β Cell transplantation and immunosuppression: can’t live with it, can’t live without it","year":2007,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Immunosuppression; Islet cell transplantation; Transplantation; Medicine; Insulin; Diabetes mellitus; Regeneration (biology); Bioinformatics; Islet; Cell; Immunology; Cancer research; Intensive care medicine; Biology; Internal medicine; Endocrinology; Cell biology; Genetics","score_opus":0.06100502845586089,"score_gpt":0.34267460224108387,"score_spread":0.281669573785223,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1994259848","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5481316,0.00084204564,0.00019585213,0.4478035,0.0008510929,0.00043725307,0.000035035162,0.000024170795,0.0016794828],"genre_scores_gemma":[0.07650091,0.0022504544,0.0071447203,0.90130866,0.007210794,0.000009750321,0.0004930041,0.00008252275,0.004999176],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99642587,0.00032378538,0.0018170866,0.00031377227,0.0008470656,0.00027239465],"domain_scores_gemma":[0.9955076,0.0014014181,0.0018274714,0.00023552185,0.0006200883,0.00040790695],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0012295322,0.00033314436,0.0011271723,0.00024611346,0.00008298972,0.00005016711,0.000109157605,0.0009511306,0.00022362715],"category_scores_gemma":[0.00069591566,0.00022759779,0.00023242719,0.00012949388,0.0004346313,0.00016535138,0.000012700293,0.0027776104,0.000020091655],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011693271,0.0000947399,0.06778955,0.00083772116,0.00035650222,0.00086912594,0.001642031,0.000011276149,0.0004641107,0.0000016649686,0.9261466,0.0006173085],"study_design_scores_gemma":[0.036636885,0.015841294,0.31039566,0.026865954,0.014688919,0.0050828797,0.0035118603,0.0006329516,0.01059943,0.0010064623,0.5725996,0.0021380903],"about_ca_topic_score_codex":0.000100324294,"about_ca_topic_score_gemma":0.00002026073,"teacher_disagreement_score":0.47163066,"about_ca_system_score_codex":0.00008395643,"about_ca_system_score_gemma":0.00095547165,"threshold_uncertainty_score":0.99952304},"labels":[],"label_agreement":null},{"id":"W1994485752","doi":"10.1172/jci35243","title":"Phosphorylation of GSK-3β by cGMP-dependent protein kinase II promotes hypertrophic differentiation of murine chondrocytes","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Osteoarthritis Treatment and Mechanisms","field":"Medicine","cited_by":75,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute","funders":"Canadian Institutes of Health Research; Ministry of Education, Culture, Sports, Science and Technology","keywords":"Kinase; Phosphorylation; Biology; GSK-3; Molecular biology; Internal medicine; Endocrinology; Cell biology; Medicine","score_opus":0.04803445705178283,"score_gpt":0.30602018719148194,"score_spread":0.2579857301396991,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1994485752","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976164,0.0006810628,0.00024551383,0.0006578345,0.00023622473,0.0004966087,0.0000075566372,0.00001229676,0.000046495887],"genre_scores_gemma":[0.99510926,0.00023032205,0.0038464786,0.000055822726,0.0002069052,0.000007883734,0.000052395542,0.000017309678,0.00047359715],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972188,0.00014112428,0.0017543047,0.00015607024,0.0006065274,0.00012319778],"domain_scores_gemma":[0.9971349,0.0001195325,0.001821912,0.00016552773,0.00055767386,0.000200424],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00058175344,0.00014523258,0.00066941394,0.00013035239,0.000064641485,0.000004729345,0.00007334568,0.00018128191,0.00005734927],"category_scores_gemma":[0.0010795927,0.0001131821,0.0002522449,0.0001479653,0.00017203193,0.00023631757,0.000024603294,0.00027837564,0.0000026017503],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00086580607,0.0013086782,0.060533512,0.00014474381,0.00011183128,0.00003297757,0.00027949328,0.0000073996544,0.92421454,0.00020868183,0.00016109803,0.012131213],"study_design_scores_gemma":[0.0064860247,0.009441568,0.03891391,0.0006879937,0.00024062203,0.000093134695,0.000028486025,0.00023413714,0.9420771,0.0016226713,0.00007585048,0.000098529825],"about_ca_topic_score_codex":0.0000112436655,"about_ca_topic_score_gemma":0.0000025934737,"teacher_disagreement_score":0.021619603,"about_ca_system_score_codex":0.00004034073,"about_ca_system_score_gemma":0.0002234525,"threshold_uncertainty_score":0.4615432},"labels":[],"label_agreement":null},{"id":"W1994578552","doi":"10.1172/jci35339","title":"Huntingtin-associated protein 1 interacts with Ahi1 to regulate cerebellar and brainstem development in mice","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Genetic and Kidney Cyst Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":91,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Neurological Disorders and Stroke; School of Medicine, Emory University; National Institute on Aging; National Institutes of Health; Emory University","keywords":"Joubert syndrome; Biology; Tropomyosin receptor kinase B; Brainstem; Cerebellum; Neurite; Neurotrophic factors; Decussation; Knockout mouse; Cell biology; Neurotrophin; Neuroscience; Receptor; Genetics; Cilium","score_opus":0.03352319219008865,"score_gpt":0.29829555512642186,"score_spread":0.2647723629363332,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1994578552","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988577,0.000080994934,0.000109835324,0.00066422916,0.00005341376,0.00015065407,9.426779e-7,0.0000024406588,0.00007978601],"genre_scores_gemma":[0.9920786,0.000022769054,0.00672291,0.000812367,0.00010882217,0.0000031530285,0.000009048822,0.000009913312,0.00023241373],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99870133,0.00013855388,0.0007232871,0.00015618568,0.00016105291,0.00011956149],"domain_scores_gemma":[0.9990054,0.00003406058,0.00042731018,0.00007354735,0.00019572586,0.0002640065],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006471982,0.00009188897,0.00020791063,0.000052553056,0.000042102343,0.000012888384,0.00008383263,0.000105052706,0.0000020988416],"category_scores_gemma":[0.0014875171,0.00007362799,0.00004090009,0.0000935719,0.0000859922,0.000008022517,0.000039377108,0.00012629268,0.0000019709423],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000896058,0.00033462787,0.47173154,0.000057152585,0.00017454289,0.000065265165,0.00080124295,0.0002500549,0.51935667,0.000009463922,0.0023318375,0.0039915517],"study_design_scores_gemma":[0.0016857791,0.00081432634,0.7502409,0.00035540597,0.000016658496,0.000049958668,0.000062291365,0.00003157692,0.24327362,0.00006806486,0.0032463137,0.00015507892],"about_ca_topic_score_codex":0.000005829394,"about_ca_topic_score_gemma":0.00004319662,"teacher_disagreement_score":0.27850938,"about_ca_system_score_codex":0.000013398905,"about_ca_system_score_gemma":0.00040817808,"threshold_uncertainty_score":0.30024624},"labels":[],"label_agreement":null},{"id":"W1994727775","doi":"10.1172/jci44474","title":"Loss-of-function mutations in the glutamate transporter SLC1A1 cause human dicarboxylic aminoaciduria","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Amino Acid Enzymes and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":163,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"National Health and Medical Research Council; Université de Sherbrooke","keywords":"Biology; Glutamate receptor; Synaptic cleft; Transporter; Biochemistry; Gene; Receptor","score_opus":0.044437873774249424,"score_gpt":0.35241810130637047,"score_spread":0.30798022753212106,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1994727775","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980941,0.00008985403,0.00041507365,0.0005382436,0.00060168636,0.00009413447,0.000004534427,0.000002107208,0.00016026582],"genre_scores_gemma":[0.99791527,0.00007797341,0.00056511746,0.00049446616,0.000838767,0.0000034029797,0.000037598184,0.000009459,0.000057968162],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983349,0.00016584335,0.0010614494,0.00012306661,0.00020621618,0.00010855658],"domain_scores_gemma":[0.99882257,0.00006330059,0.0006530107,0.00021109507,0.00016110911,0.00008893366],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014674199,0.00009198478,0.00022531682,0.0000624236,0.000042800246,0.000014559754,0.00019296257,0.0002058301,0.000016816477],"category_scores_gemma":[0.0003971259,0.000063137864,0.0001856916,0.000111913956,0.00028145453,0.000017908122,0.000011140291,0.00042941605,0.0000016174082],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000114929666,0.00021051853,0.19445601,0.000020276551,0.00009182297,0.000012192872,0.00040348803,0.00007843431,0.7988171,0.0025190809,0.0006297947,0.002646375],"study_design_scores_gemma":[0.0012436929,0.00047144436,0.9498274,0.000024229932,0.00015523485,0.000040918047,0.000100783895,0.000030276578,0.036771204,0.0038097203,0.0074191913,0.00010596116],"about_ca_topic_score_codex":0.00001882361,"about_ca_topic_score_gemma":0.00017780098,"teacher_disagreement_score":0.76204586,"about_ca_system_score_codex":0.0000024080566,"about_ca_system_score_gemma":0.000103998056,"threshold_uncertainty_score":0.25746876},"labels":[],"label_agreement":null},{"id":"W1994946944","doi":"10.1172/jci38201","title":"Foxa1 and Foxa2 regulate bile duct development in mice","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":135,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; U.S. Public Health Service; National Institute of Diabetes and Digestive and Kidney Diseases; University of Pennsylvania","keywords":"FOXA2; FOXA1; Biology; Transcription factor; Endocrinology; Internal medicine; Bile duct; Cancer research; Cell biology; Medicine; Genetics; Gene","score_opus":0.08314764188118096,"score_gpt":0.3706393687716617,"score_spread":0.28749172689048075,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1994946944","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933946,0.00026469654,0.00005382013,0.0053344807,0.00019116433,0.000077524615,1.2096318e-7,0.000006987928,0.0006765895],"genre_scores_gemma":[0.98463273,0.000090775866,0.011974024,0.0027394367,0.00025895488,5.6334994e-7,0.0000020898092,0.0000038046921,0.00029765],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99850464,0.000081092585,0.0010355131,0.00009354778,0.00019506112,0.00009012156],"domain_scores_gemma":[0.9989388,0.00026482827,0.00037566532,0.00006135612,0.00013518945,0.00022416747],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014078044,0.000066320885,0.0003411769,0.000117931304,0.00002014846,0.000011636145,0.00002972096,0.00008980321,0.000025687432],"category_scores_gemma":[0.0022606214,0.000049280185,0.00005988055,0.00013330865,0.00006610945,0.00012560462,0.0000060216585,0.00023725968,0.000007058954],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008262144,0.00046720298,0.7865484,0.000083628,0.00010298983,0.00008724059,0.00078391185,0.00003363312,0.03798534,0.00065822236,0.007092201,0.16533102],"study_design_scores_gemma":[0.0023949556,0.0006020678,0.9783258,0.00032654847,0.00004391729,0.00006124704,0.00004153343,0.00026580752,0.009900164,0.0041976715,0.0037808844,0.000059428025],"about_ca_topic_score_codex":0.0000017571257,"about_ca_topic_score_gemma":0.0000011552067,"teacher_disagreement_score":0.19177738,"about_ca_system_score_codex":0.000028457624,"about_ca_system_score_gemma":0.0002375453,"threshold_uncertainty_score":0.27063382},"labels":[],"label_agreement":null},{"id":"W1995040137","doi":"10.1172/jci13712","title":"Glypicans: proteoglycans with a surprise","year":2001,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Proteoglycans and glycosaminoglycans research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":361,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Toronto; Sunnybrook Health Science Centre","funders":"National Institutes of Health; March of Dimes Foundation","keywords":"Morphogenesis; Biology; Glypican 3; Heparan sulfate; Function (biology); Cell biology; Heparin; Genetics; Biochemistry; Gene","score_opus":0.14312054017075077,"score_gpt":0.44548030467022703,"score_spread":0.30235976449947627,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1995040137","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0026639355,0.9943352,0.0011183013,0.00016451726,0.00030906868,0.0009746612,0.000029357592,0.000007779286,0.0003972086],"genre_scores_gemma":[0.00009505024,0.9929341,0.0032951375,0.00013397762,0.0022701593,0.00006122687,0.00010962881,0.0000764846,0.0010242086],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99512917,0.0008602087,0.0025006772,0.00047327738,0.0006602646,0.0003763789],"domain_scores_gemma":[0.995595,0.00018150528,0.0024404682,0.00058128353,0.0006558838,0.0005458683],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0024839123,0.0004273238,0.0018927482,0.00022757599,0.00007498274,0.00007774447,0.0007045951,0.0008119696,0.000033520257],"category_scores_gemma":[0.0016521058,0.00027757217,0.00090345106,0.00049934984,0.00048369766,0.000017569932,0.00010896658,0.0012599976,0.00001619481],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032738657,0.00019776546,0.00048084074,0.0015695338,0.0005704804,0.0001459556,0.000010529711,0.000006586089,0.000028953365,0.000028387289,0.0039596367,0.99267393],"study_design_scores_gemma":[0.0008713817,0.0031400404,0.00006652165,0.0050507574,0.00044653073,0.00059275504,0.000010439849,0.0000043705872,0.00007854412,0.00008464556,0.9893171,0.00033690364],"about_ca_topic_score_codex":0.000019584322,"about_ca_topic_score_gemma":0.000055380144,"teacher_disagreement_score":0.99233705,"about_ca_system_score_codex":0.000048488033,"about_ca_system_score_gemma":0.0033319509,"threshold_uncertainty_score":0.99996763},"labels":[],"label_agreement":null},{"id":"W1995051972","doi":"10.1172/jci9258","title":"Enhanced intestinal transepithelial antigen transport in allergic rats is mediated by IgE and CD23 (FcεRII)","year":2000,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Mast cells and histamine","field":"Immunology and Microbiology","cited_by":138,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Medical Research Council; Medical Research Council Canada","keywords":"CD23; Antigen; Immunoglobulin E; Sensitization; Chemistry; Antibody; Horseradish peroxidase; Transcytosis; Receptor; Immunology; Molecular biology; Biology; Cell biology; Biochemistry; Endocytosis","score_opus":0.02836230127404874,"score_gpt":0.29517622438813257,"score_spread":0.2668139231140838,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1995051972","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962241,0.0011241052,0.00011914307,0.0015326684,0.00029292828,0.00010025504,0.000020867,0.000009587147,0.000576354],"genre_scores_gemma":[0.99526435,0.0022002321,0.00023065651,0.00084286544,0.000089956884,0.0000015650963,0.000057217723,0.000010912748,0.0013022436],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99780554,0.0002640968,0.0014720398,0.00019295038,0.00007350278,0.00019188561],"domain_scores_gemma":[0.99899065,0.0003262657,0.0004073426,0.00008894521,0.00009435186,0.00009243793],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010896028,0.00014134137,0.0005079193,0.000084638225,0.000051482108,0.000008608569,0.00013386001,0.00029830413,0.0021818932],"category_scores_gemma":[0.00016130408,0.00011680311,0.00012369982,0.00013237784,0.0004067987,0.00015186337,0.0000044699664,0.00062452815,0.00006147767],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002082758,0.00054675044,0.04149117,0.000048803227,0.00019458786,0.00005389716,0.0031768207,0.000024341103,0.8995045,0.000061421255,0.007282783,0.045532174],"study_design_scores_gemma":[0.018218309,0.0038345647,0.48547524,0.00072756,0.00021579882,0.00029622245,0.00027759714,0.00019315397,0.31878754,0.0024757741,0.16868958,0.0008086603],"about_ca_topic_score_codex":0.000048503356,"about_ca_topic_score_gemma":0.00008006112,"teacher_disagreement_score":0.58071697,"about_ca_system_score_codex":0.000011805777,"about_ca_system_score_gemma":0.00012886443,"threshold_uncertainty_score":0.99873024},"labels":[],"label_agreement":null},{"id":"W1995341351","doi":"10.1172/jci13073","title":"Osteolysis and cancer","year":2001,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Bone health and treatments","field":"Medicine","cited_by":80,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Cancer; Osteolysis; Medicine; Oncology; Cancer research; Internal medicine; Surgery","score_opus":0.1493886018511252,"score_gpt":0.4461052461273792,"score_spread":0.296716644276254,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1995341351","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17243603,0.0020191192,0.000007256167,0.82416344,0.00089504465,0.00015157078,0.000005777958,0.0000069996554,0.0003147616],"genre_scores_gemma":[0.0057424246,0.0073773214,0.00159041,0.97121465,0.009639402,0.000005780144,0.000047780715,0.000031211803,0.004351024],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99757206,0.00016462535,0.001525444,0.00015905814,0.00041665495,0.00016213921],"domain_scores_gemma":[0.9972691,0.0004230841,0.0014860842,0.0001393247,0.00032310418,0.0003593265],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006585653,0.00014785111,0.0008820195,0.00014108027,0.000034237182,0.000015726062,0.000046537098,0.0007583409,0.00010268114],"category_scores_gemma":[0.000789154,0.000103444,0.00024916063,0.00011454149,0.00015812417,0.00008707582,0.000011911656,0.002121201,0.000012538938],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010102908,0.00003239899,0.19356158,0.00016393779,0.00026103496,0.0007252713,0.000021185506,2.9480577e-7,0.0000032926696,0.0000013838571,0.76401615,0.041112415],"study_design_scores_gemma":[0.0026752923,0.0008560577,0.11194948,0.00092617574,0.0013850038,0.0005206506,0.000003883812,0.00002562201,0.000021314496,0.0009947518,0.880541,0.00010075674],"about_ca_topic_score_codex":0.000106832995,"about_ca_topic_score_gemma":0.000009066008,"teacher_disagreement_score":0.16669361,"about_ca_system_score_codex":0.000059620623,"about_ca_system_score_gemma":0.0007087061,"threshold_uncertainty_score":0.9215681},"labels":[],"label_agreement":null},{"id":"W1997664301","doi":"10.1172/jci19930","title":"Pre–B cell colony–enhancing factor inhibits neutrophil apoptosis in experimental inflammation and clinical sepsis","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":594,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Hospital for Sick Children; Toronto General Hospital; University of Toronto","funders":"Canadian Institutes of Health Research; Amgen","keywords":"Apoptosis; Inflammation; Sepsis; Tumor necrosis factor alpha; Immunology; Biology; Cytokine; Downregulation and upregulation; Molecular biology; Biochemistry; Gene","score_opus":0.041278757108848874,"score_gpt":0.3440752805889518,"score_spread":0.30279652348010294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1997664301","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99669254,0.0007021125,0.00014660262,0.0011156087,0.00104515,0.00021973849,0.0000012784774,0.000015082926,0.00006191753],"genre_scores_gemma":[0.9984151,0.000397244,0.00065061916,0.0001916845,0.00024256985,0.000004296448,0.0000145719,0.000013189935,0.00007073676],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99595696,0.0008177433,0.002719243,0.00020737661,0.00009842118,0.00020027363],"domain_scores_gemma":[0.9974879,0.00069506775,0.0014268553,0.00013774284,0.00017542583,0.00007699559],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021417676,0.00016014097,0.00055246084,0.00021405118,0.00008883004,0.000032628486,0.00012824695,0.0005069472,0.00004104833],"category_scores_gemma":[0.0013831671,0.00014044967,0.00020560606,0.00016446956,0.0002903748,0.0006377514,0.00005425637,0.0007916119,0.000047352773],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00091187586,0.0002454845,0.036951516,0.000025076624,0.00007610697,0.000004340314,0.0012308758,0.0001341149,0.9555685,0.00014288115,0.00011722879,0.0045919837],"study_design_scores_gemma":[0.004556995,0.0011487803,0.16603523,0.0001870225,0.000040754887,0.000021412956,0.00021605693,0.000018246436,0.8266669,0.0005009616,0.00047542725,0.0001322194],"about_ca_topic_score_codex":0.000032827636,"about_ca_topic_score_gemma":0.000020434036,"teacher_disagreement_score":0.12908371,"about_ca_system_score_codex":0.00009038882,"about_ca_system_score_gemma":0.0003027848,"threshold_uncertainty_score":0.57273716},"labels":[],"label_agreement":null},{"id":"W1997694334","doi":"10.1172/jci41158","title":"Enabling stem cell therapies through synthetic stem cell–niche engineering","year":2010,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"3D Printing in Biomedical Research","field":"Engineering","cited_by":171,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Heart and Stroke Foundation; University Health Network; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Stem Cell Network","keywords":"Stem cell; Niche; Stem cell niche; Biology; Cell biology; Progenitor cell; Ecology","score_opus":0.1560639909129672,"score_gpt":0.3954423933539506,"score_spread":0.2393784024409834,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1997694334","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0032470415,0.98979425,0.0024394614,0.000095606214,0.0035285756,0.0003763094,0.0000070775995,0.00013824619,0.00037342985],"genre_scores_gemma":[0.0013976948,0.9897261,0.006490522,0.00003558657,0.0019428722,0.00001566265,0.000005812447,0.00017411589,0.00021161752],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9935472,0.0004982907,0.003995368,0.00034938648,0.0010827824,0.0005269448],"domain_scores_gemma":[0.99192715,0.005223021,0.0014536188,0.0005672615,0.0002776095,0.00055137195],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.005541551,0.000536003,0.002365382,0.00035287163,0.00006721336,0.00018350715,0.0010325899,0.0013503283,0.000052303658],"category_scores_gemma":[0.00076685526,0.0004121562,0.0010940831,0.0005736828,0.00024079632,0.00032378855,0.00012903998,0.0057141576,0.000116963056],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000037430111,0.00004913529,0.000021169479,0.013814814,0.00018301701,0.000033999615,0.00015759887,0.00037000258,0.00017638705,0.00006490201,0.00057491555,0.9845503],"study_design_scores_gemma":[0.00028831296,0.00012668417,0.00000975472,0.010764198,0.00038415968,0.000049441755,0.000033488053,0.0017914592,0.0006544722,0.00013666363,0.98534644,0.00041494414],"about_ca_topic_score_codex":0.000001372674,"about_ca_topic_score_gemma":4.8114276e-7,"teacher_disagreement_score":0.9847715,"about_ca_system_score_codex":0.00014725066,"about_ca_system_score_gemma":0.00056095584,"threshold_uncertainty_score":0.9999461},"labels":[],"label_agreement":null},{"id":"W1998183802","doi":"10.1172/jci44723","title":"Death effector domain–containing protein (DEDD) is required for uterine decidualization during early pregnancy in mice","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Reproductive System and Pregnancy","field":"Immunology and Microbiology","cited_by":61,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; University of Tokyo","keywords":"Decidualization; Decidua; Decidual cells; Biology; Stromal cell; Cell biology; Placenta; Uterus; Placentation; Endocrinology; Internal medicine; Embryo; Andrology; Cancer research; Pregnancy; Fetus; Medicine; Genetics","score_opus":0.05634501454228507,"score_gpt":0.35988889947389446,"score_spread":0.3035438849316094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998183802","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99510485,0.00088610966,0.0009295119,0.0004359318,0.0017519431,0.0008001164,0.000009211965,0.00001693311,0.00006537584],"genre_scores_gemma":[0.9951675,0.000020470872,0.003837777,0.000056867662,0.00041342553,0.000047611553,0.000015127447,0.000020497211,0.00042072806],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9971703,0.0005510218,0.0016795065,0.00029508703,0.00007563345,0.00022844541],"domain_scores_gemma":[0.99761975,0.0004202208,0.0013275885,0.00021944096,0.00035317425,0.000059820377],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022185901,0.000155556,0.0005282501,0.00015495614,0.0000966103,0.0000283737,0.00020087241,0.00037530108,0.000044181605],"category_scores_gemma":[0.0027106379,0.0001294645,0.00019657907,0.0001422356,0.00013235271,0.00044862067,0.00003353958,0.000549583,0.000021752681],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037864866,0.00006931388,0.21689615,0.00012830396,0.00007743225,0.000007334336,0.00080050126,0.000002574905,0.7793443,0.00067132537,0.000037851383,0.0015862528],"study_design_scores_gemma":[0.0052716434,0.0011239089,0.68132687,0.0020873805,0.000040481445,0.000095950236,0.00004315961,0.00000458517,0.3011756,0.0076666814,0.000969291,0.00019447591],"about_ca_topic_score_codex":0.000020887428,"about_ca_topic_score_gemma":0.00001917191,"teacher_disagreement_score":0.47816873,"about_ca_system_score_codex":0.000025440217,"about_ca_system_score_gemma":0.00013748302,"threshold_uncertainty_score":0.5279409},"labels":[],"label_agreement":null},{"id":"W1998212202","doi":"10.1172/jci34694","title":"Proteinase 3 and neutrophil elastase enhance inflammation in mice by inactivating antiinflammatory progranulin","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Neutrophil, Myeloperoxidase and Oxidative Mechanisms","field":"Immunology and Microbiology","cited_by":366,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Victoria Hospital","funders":"Bundesministerium für Bildung und Forschung; Deutsche Forschungsgemeinschaft","keywords":"Elastase; Neutrophil elastase; Inflammation; Proteinase 3; Immunology; Pancreatic elastase; Medicine; Chemistry; Enzyme; Myeloperoxidase; Biochemistry","score_opus":0.03307670916146587,"score_gpt":0.3067229042233473,"score_spread":0.2736461950618814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998212202","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99738145,0.00067613606,0.00030476673,0.0010057263,0.00026365806,0.0003160276,0.0000044753174,0.000015833748,0.000031919095],"genre_scores_gemma":[0.99754417,0.00037001,0.0015816299,0.00019956185,0.00016522566,0.000012021736,0.000021763028,0.000014343803,0.00009127354],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99721456,0.0007022648,0.0015589662,0.0002247595,0.00009124679,0.00020817913],"domain_scores_gemma":[0.99798584,0.00037449924,0.0012324308,0.00010225617,0.00022778001,0.00007719693],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015078156,0.00016621956,0.00047900667,0.00016062458,0.00012930625,0.000014744871,0.00013035144,0.00025944258,0.000020506628],"category_scores_gemma":[0.0011043125,0.00014162067,0.00008854425,0.00019948931,0.0004108659,0.00057261373,0.000039898507,0.0008028725,0.0000234663],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033210556,0.000098364086,0.01167618,0.000031273874,0.00003719053,0.000053706124,0.00031087108,0.000007523617,0.976321,0.00019276167,0.00040552724,0.010533487],"study_design_scores_gemma":[0.0023005912,0.0007369323,0.022515384,0.00022700412,0.000021849663,0.00016853791,0.000100073805,0.000021193788,0.970815,0.0009946752,0.0019334983,0.00016525046],"about_ca_topic_score_codex":0.000018683639,"about_ca_topic_score_gemma":0.0000066072344,"teacher_disagreement_score":0.010839203,"about_ca_system_score_codex":0.000034763467,"about_ca_system_score_gemma":0.00017744064,"threshold_uncertainty_score":0.5775123},"labels":[],"label_agreement":null},{"id":"W1998595688","doi":"10.1172/jci13297","title":"Transplantable hematopoietic stem cells in human fetal liver have a CD34+ side population (SP)phenotype","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Hematopoietic Stem Cell Transplantation","field":"Medicine","cited_by":128,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"National Heart, Lung, and Blood Institute; Canadian Institutes of Health Research; U.S. Public Health Service; Genentech; National Cancer Institute; National Institutes of Health","keywords":"Stem cell; Biology; Haematopoiesis; Side population; CD34; Progenitor cell; CD38; Population; Cell biology; Adult stem cell; Immunology; Molecular biology; Endothelial stem cell; Cancer stem cell; In vitro; Medicine; Biochemistry","score_opus":0.0849607709331118,"score_gpt":0.3567320339922706,"score_spread":0.2717712630591588,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998595688","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99553907,0.00014209021,0.0020106963,0.0005415693,0.00037955394,0.00037648692,0.0000034936504,0.000024758478,0.0009822531],"genre_scores_gemma":[0.995574,0.00037161686,0.0028185002,0.00042244975,0.00039747244,0.0000039665747,0.00003037108,0.000031332936,0.0003503101],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9959135,0.0003468602,0.0025365762,0.00025172302,0.0006869349,0.00026437786],"domain_scores_gemma":[0.99779713,0.00050066673,0.00089386903,0.00021571729,0.00023134254,0.0003612495],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021121802,0.00019942355,0.00080140523,0.0002811374,0.000062598476,0.00003256871,0.00012150041,0.00030670018,0.000093252354],"category_scores_gemma":[0.00010358151,0.00017466476,0.00027960222,0.00028406692,0.000112581714,0.00037245612,0.000008299835,0.00066612306,0.000038121492],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013536969,0.0007987726,0.94311655,0.00084708625,0.00014371374,0.0013472344,0.002539388,0.0007334807,0.041073367,0.0006328135,0.0002961113,0.007117815],"study_design_scores_gemma":[0.012649773,0.0018698208,0.9342101,0.003583252,0.00083307276,0.0017283154,0.00049996574,0.006872334,0.033012062,0.0037093672,0.00055938726,0.00047252772],"about_ca_topic_score_codex":0.00015115598,"about_ca_topic_score_gemma":0.00012703692,"teacher_disagreement_score":0.011296076,"about_ca_system_score_codex":0.00010535645,"about_ca_system_score_gemma":0.00017291219,"threshold_uncertainty_score":0.7122623},"labels":[],"label_agreement":null},{"id":"W1999182967","doi":"10.1172/jci63606","title":"Toll-like receptor 7 regulates pancreatic carcinogenesis in mice and humans","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":208,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institutes of Health; National Cancer Institute; School of Medicine, New York University; York University; National Pancreas Foundation","keywords":"Pancreatic cancer; Cancer research; Stromal cell; Carcinogenesis; Biology; TLR7; Tumor microenvironment; Downregulation and upregulation; Pancreatic Intraepithelial Neoplasia; Pancreatic tumor; Cancer; Toll-like receptor; Immunology; Innate immune system; Immune system","score_opus":0.128326457070998,"score_gpt":0.42479803278184913,"score_spread":0.29647157571085114,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999182967","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948894,0.0014431542,0.000025391517,0.002641663,0.00026335125,0.00016392519,8.672663e-7,0.000005264958,0.00056700053],"genre_scores_gemma":[0.9910898,0.00087887,0.0061512715,0.00063920644,0.0007479587,0.000003766362,0.0000037527952,0.0000104494275,0.00047493028],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978143,0.00037731385,0.0011907485,0.00010533854,0.00029437916,0.00021791048],"domain_scores_gemma":[0.99773586,0.0010875276,0.00042653555,0.00011121608,0.00018466245,0.00045418378],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0036116573,0.0000913601,0.0007011098,0.0001566055,0.00003796206,0.000009388629,0.000060884395,0.00019194887,0.000086834676],"category_scores_gemma":[0.0026637043,0.00006764469,0.00010065438,0.0001522471,0.00029196704,0.0002057484,0.0000233335,0.0004064589,0.000016230159],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025139123,0.00014395537,0.99119914,0.00006199212,0.00007046778,0.000011120027,0.00041658492,6.2982286e-7,0.0044725854,0.00017140062,0.0014542064,0.0017465459],"study_design_scores_gemma":[0.0018928146,0.00059951865,0.99354297,0.00026624458,0.00024422433,0.00011283311,0.00020952466,0.00016470086,0.0010122543,0.00073399965,0.0011575994,0.00006330106],"about_ca_topic_score_codex":0.000035820613,"about_ca_topic_score_gemma":0.000011170864,"teacher_disagreement_score":0.00612588,"about_ca_system_score_codex":0.000058853708,"about_ca_system_score_gemma":0.0002720125,"threshold_uncertainty_score":0.31888953},"labels":[],"label_agreement":null},{"id":"W1999223726","doi":"10.1172/jci63375","title":"Tranexamic acid concentrations associated with human seizures inhibit glycine receptors","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Epilepsy research and treatment","field":"Medicine","cited_by":197,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Health Science Centre; St. Michael's Hospital; University of Toronto","funders":"Canadian Institutes of Health Research; University of Toronto; Savoy Foundation","keywords":"Tranexamic acid; Antifibrinolytic; Receptor; Pharmacology; Glycine receptor; Glycine; Medicine; Isoflurane; GABAA receptor; Propofol; Anesthesia; Chemistry; Internal medicine; Amino acid; Biochemistry; Surgery; Blood loss","score_opus":0.12971875959745763,"score_gpt":0.42007499725322783,"score_spread":0.29035623765577023,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999223726","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953651,0.00030097636,0.000096176336,0.0031810768,0.00021098218,0.00022777959,0.0000030060485,0.000017522354,0.000597409],"genre_scores_gemma":[0.997272,0.00008659517,0.00095425226,0.0005348628,0.00075454597,0.000003869803,0.00005991242,0.000014443154,0.00031948587],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978034,0.00029666908,0.0010100792,0.00009804555,0.0005425707,0.0002492471],"domain_scores_gemma":[0.9977119,0.00038351797,0.0006448638,0.00011854871,0.00042158997,0.0007195871],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016978103,0.000112983005,0.00044441907,0.00009072453,0.00009081522,0.000019584673,0.000055655848,0.0001358247,0.00015612924],"category_scores_gemma":[0.0021917715,0.000072222,0.00015622111,0.00021507597,0.00027244806,0.00031977583,0.000007233779,0.0005695763,0.00001610058],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032777336,0.0007596279,0.9867635,0.000017338276,0.0003992131,0.00004478789,0.00028995157,0.0000049855744,0.0057999683,0.00036421107,0.0038061382,0.0014225391],"study_design_scores_gemma":[0.00685626,0.0045671305,0.96941245,0.00052672083,0.00043824204,0.00013980025,0.00012532549,0.000035828216,0.016269319,0.0005329797,0.0009894865,0.00010644682],"about_ca_topic_score_codex":0.000007593625,"about_ca_topic_score_gemma":0.000020281797,"teacher_disagreement_score":0.017351003,"about_ca_system_score_codex":0.0000993966,"about_ca_system_score_gemma":0.00033126178,"threshold_uncertainty_score":0.29451278},"labels":[],"label_agreement":null},{"id":"W1999644843","doi":"10.1172/jci12568","title":"Transient expression of IL-1β induces acute lung injury and chronic repair leading to pulmonary fibrosis","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Interstitial Lung Diseases and Idiopathic Pulmonary Fibrosis","field":"Medicine","cited_by":741,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research; Wellcome Trust","keywords":"Proinflammatory cytokine; Medicine; Fibrosis; Bronchoalveolar lavage; Pulmonary fibrosis; Lung; Pathology; Fibroblast; Inflammation; Cytokine; Immunology; Internal medicine; Biology; Cell culture","score_opus":0.038463102148587926,"score_gpt":0.36230013710150505,"score_spread":0.3238370349529171,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999644843","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957086,0.0008744384,0.00029488493,0.0022600812,0.00040447482,0.00021376461,0.00001672232,0.000018976003,0.00020809755],"genre_scores_gemma":[0.99522704,0.0010066079,0.0020966188,0.00056192424,0.00095282245,0.0000035973512,0.000008724582,0.000017150782,0.0001255444],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99757683,0.00015311688,0.0014671945,0.00021298027,0.00041731825,0.00017254849],"domain_scores_gemma":[0.9982144,0.00017625785,0.0006305434,0.00017060727,0.00028382946,0.0005243659],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009094438,0.00014294613,0.0006051033,0.0001857543,0.00006116789,0.000014707778,0.0000927794,0.00018139853,0.00003382867],"category_scores_gemma":[0.00044329162,0.000112156,0.00038187095,0.00022192676,0.00017280917,0.00033853838,0.00004042046,0.0003936731,0.000003028816],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009380325,0.00037386396,0.05038426,0.00048422063,0.00019969625,0.00022619762,0.00038407702,0.00004781346,0.91944677,0.0000759903,0.005553366,0.013443445],"study_design_scores_gemma":[0.004888974,0.052262977,0.7077942,0.023799406,0.0034626396,0.0016009321,0.0006155675,0.0067983037,0.18207423,0.0013972267,0.014420016,0.00088554865],"about_ca_topic_score_codex":0.000007779918,"about_ca_topic_score_gemma":6.5537546e-7,"teacher_disagreement_score":0.7373725,"about_ca_system_score_codex":0.00007956918,"about_ca_system_score_gemma":0.00027979488,"threshold_uncertainty_score":0.4573589},"labels":[],"label_agreement":null},{"id":"W1999950133","doi":"10.1172/jci24343","title":"The great betrayal Fraud in science","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Ethics in Clinical Research","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Betrayal; Political science; Law","score_opus":0.6000076959296559,"score_gpt":0.635762690875225,"score_spread":0.03575499494556911,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999950133","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9327376,0.00021120376,0.000075962,0.063629724,0.00047485382,0.0001139451,2.5992475e-7,0.0000054965312,0.0027509432],"genre_scores_gemma":[0.98833877,0.0008520043,0.005704836,0.0028442238,0.0015494723,0.000001268081,2.770845e-7,0.000007910046,0.0007012395],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9952957,0.00024690546,0.002167833,0.00017922516,0.0018488144,0.00026154766],"domain_scores_gemma":[0.9736421,0.022590594,0.0008576645,0.00042432867,0.0017728782,0.00071239704],"candidate_categories":["metaresearch","research_integrity"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.04231085,0.00007161289,0.00033434434,0.00016743272,0.00014167078,0.00006836551,0.0004397627,0.00026150598,0.000037958525],"category_scores_gemma":[0.16123071,0.00004168214,0.00017509665,0.0006102429,0.0026961525,0.00031879346,0.000076049626,0.003534863,0.000043079046],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00058500835,0.00027679125,0.8367739,0.00003891424,0.000036786827,0.00005795324,0.00027166592,0.000092472575,0.0020359547,0.029701564,0.0022499312,0.12787907],"study_design_scores_gemma":[0.0022259103,0.0011580184,0.86972755,0.0005121312,0.00003284569,0.000063775486,0.00009193871,0.0018400525,0.002941253,0.10995798,0.011371284,0.00007728642],"about_ca_topic_score_codex":0.000006553195,"about_ca_topic_score_gemma":0.00011706748,"teacher_disagreement_score":0.12780179,"about_ca_system_score_codex":0.00013028413,"about_ca_system_score_gemma":0.0027118935,"threshold_uncertainty_score":0.99876404},"labels":[],"label_agreement":null},{"id":"W2000180809","doi":"10.1172/jci65634","title":"Atrx deficiency induces telomere dysfunction, endocrine defects, and reduced life span","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":132,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; Children’s Health Research Institute","funders":"Canadian Institutes of Health Research","keywords":"ATRX; Telomere; Biology; DNA damage; Cell biology; Cancer research; Mutation; Genetics; DNA; Gene","score_opus":0.03927356218154909,"score_gpt":0.31483743901136907,"score_spread":0.27556387682982,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2000180809","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99721634,0.0005645905,0.00033823916,0.0009830409,0.00054194033,0.00012561558,8.6119303e-7,0.000007811187,0.0002215545],"genre_scores_gemma":[0.9938074,0.00026345896,0.0041899104,0.00081863586,0.00075641816,0.000004454318,0.0000069918433,0.000013354517,0.00013940805],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984081,0.00017874465,0.00087089185,0.00019855959,0.00020040257,0.00014331315],"domain_scores_gemma":[0.99845827,0.00007703976,0.00063645944,0.00016443887,0.0003416358,0.00032216188],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007627456,0.00011299692,0.00023532848,0.000057276648,0.000056494842,0.000044487988,0.00012387209,0.00016198074,0.00003527658],"category_scores_gemma":[0.0032751453,0.00009139709,0.0001527563,0.00009137315,0.00014310634,0.00002858752,0.000058005175,0.00023434187,0.000015757283],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005032473,0.000071583454,0.024768787,0.000022640117,0.000056024506,0.0000028489387,0.000027389931,0.00002678232,0.96304506,0.00037938842,0.0051180776,0.0064311144],"study_design_scores_gemma":[0.002626297,0.0038082674,0.29909056,0.0001187342,0.00019135888,0.00026949178,0.00031117414,0.00021607369,0.6685188,0.019891553,0.004527796,0.00042992827],"about_ca_topic_score_codex":0.000010110443,"about_ca_topic_score_gemma":0.0000028653296,"teacher_disagreement_score":0.29452628,"about_ca_system_score_codex":0.000007638848,"about_ca_system_score_gemma":0.00021097054,"threshold_uncertainty_score":0.39208916},"labels":[],"label_agreement":null},{"id":"W2000268599","doi":"10.1172/jci22382","title":"Unbuckling lipodystrophy from insulin resistance and hypertension","year":2004,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Nuclear Structure and Function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Robarts Clinical Trials","funders":"","keywords":"Lipodystrophy; Insulin resistance; Medicine; Internal medicine; Endocrinology; Insulin; Immunology; Human immunodeficiency virus (HIV)","score_opus":0.03421267541240828,"score_gpt":0.2838585953112628,"score_spread":0.2496459198988545,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2000268599","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8405075,0.0030767783,0.0005097722,0.15323743,0.0024081944,0.00010748794,0.000023057864,0.0000072739945,0.0001224769],"genre_scores_gemma":[0.19087401,0.0033266223,0.028227707,0.71788275,0.057933077,0.000002022182,0.0007599248,0.00011883133,0.0008750764],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99819136,0.00017003542,0.0009925944,0.00027493763,0.00025357414,0.00011751433],"domain_scores_gemma":[0.99822235,0.00009262022,0.0011014612,0.00021055831,0.00027322886,0.00009976995],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038665076,0.0001720697,0.00041626202,0.000056551133,0.00005107782,0.00004058155,0.00012941292,0.0010670543,0.00000848612],"category_scores_gemma":[0.00086092344,0.00014221152,0.00019534914,0.000052159892,0.00017307846,0.0000104466135,0.000039729992,0.001256399,0.000003901162],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004402843,0.000024044843,0.0013729173,0.000077302466,0.00026114465,0.00018252608,0.00002932037,0.00003770719,0.04370223,0.000018658624,0.94748515,0.006368722],"study_design_scores_gemma":[0.0015199372,0.0006986129,0.012293229,0.0004399521,0.0002348392,0.000072912546,0.000010775548,0.000017171113,0.003325642,0.009805009,0.97130466,0.0002772849],"about_ca_topic_score_codex":0.000012290974,"about_ca_topic_score_gemma":0.000007162488,"teacher_disagreement_score":0.6496335,"about_ca_system_score_codex":0.000015819565,"about_ca_system_score_gemma":0.00021084333,"threshold_uncertainty_score":0.82301},"labels":[],"label_agreement":null},{"id":"W2000433774","doi":"10.1172/jci22588","title":"Severe combined immunodeficiency caused by deficiency in either the δ or the ε subunit of CD3","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immunodeficiency and Autoimmune Disorders","field":"Immunology and Microbiology","cited_by":133,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Cytodiagnostics (Canada)","funders":"Institut National de la Santé et de la Recherche Médicale","keywords":"Thymocyte; Biology; Immunodeficiency; CD8; Mutation; Haplotype; Severe combined immunodeficiency; CD3; Gene; Genetics; Protein subunit; T-cell receptor; Fetus; Molecular biology; T cell; Genotype; Antigen; Immune system","score_opus":0.04156642247161749,"score_gpt":0.3162717148576206,"score_spread":0.27470529238600316,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2000433774","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98608553,0.007795778,0.00011419155,0.0044582873,0.00091679086,0.00022936254,0.0000062113118,0.000008957548,0.00038487752],"genre_scores_gemma":[0.99837214,0.00034041086,0.000018354356,0.000717636,0.000008165141,0.000004147315,0.000009569717,0.0000119748765,0.0005175765],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99671453,0.00071708835,0.0020071315,0.00015283887,0.00013032948,0.00027807138],"domain_scores_gemma":[0.99696535,0.0010536086,0.0013866775,0.00035284553,0.00022976931,0.000011735615],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0036124536,0.00016525429,0.0004805177,0.00009450367,0.00023362941,0.000020349507,0.0007565042,0.0002533211,0.00012479314],"category_scores_gemma":[0.0016529108,0.00007352635,0.00024491083,0.00055060245,0.0012934351,0.00020504584,0.000059287227,0.0010111711,0.00003650124],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007181676,0.009542279,0.10172355,0.00023023885,0.0010790012,0.00004076736,0.036286533,0.014761895,0.7032016,0.031986292,0.0071108295,0.086855374],"study_design_scores_gemma":[0.03889917,0.008335946,0.7725843,0.0012892256,0.00060949486,0.0004818975,0.018666677,0.00015062015,0.06736879,0.046487737,0.0438732,0.0012529527],"about_ca_topic_score_codex":0.00018065271,"about_ca_topic_score_gemma":0.00002860094,"teacher_disagreement_score":0.67086077,"about_ca_system_score_codex":0.000034954464,"about_ca_system_score_gemma":0.0005422224,"threshold_uncertainty_score":0.47657153},"labels":[],"label_agreement":null},{"id":"W2000665430","doi":"10.1172/jci23606","title":"FGF-21 as a novel metabolic regulator","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Fibroblast Growth Factor Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2089,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Hospital for Sick Children; Eli Lilly and Company","keywords":"FGF21; Fibroblast growth factor; Diabetes mellitus; Regulator; Genetically modified mouse; Endocrinology; Transgene; Obesity; Internal medicine; Hypoglycemia; Population; Medicine; Negative regulator; Biology; Signal transduction; Receptor; Cell biology; Biochemistry; Gene","score_opus":0.07010678309674791,"score_gpt":0.40147129151505273,"score_spread":0.33136450841830484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2000665430","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953672,0.0003985115,0.00065477774,0.0028296758,0.00023419624,0.00008084836,0.000003040136,0.000004406439,0.00042731644],"genre_scores_gemma":[0.9855794,0.00013813764,0.009927697,0.0010858404,0.0025210197,0.0000017448314,0.000010244837,0.000019217456,0.0007166996],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998073,0.00016459447,0.0010140679,0.00017930857,0.00039024538,0.00017877956],"domain_scores_gemma":[0.99840015,0.00009066263,0.0005601972,0.00023105285,0.00038140203,0.0003365202],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015800392,0.000107305656,0.00027526796,0.00007480363,0.00003869312,0.00003280084,0.0002499453,0.00022687617,0.000054473643],"category_scores_gemma":[0.0033354845,0.00008857961,0.00025046532,0.00012008647,0.00020407066,0.000021815606,0.000069178815,0.0003537619,0.000051627452],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028533078,0.0001619936,0.021514747,0.000012701013,0.00014563491,0.0000031440727,0.00003680964,0.00019149898,0.9588497,0.00093678036,0.009039748,0.008821858],"study_design_scores_gemma":[0.0023322976,0.0011970813,0.14545716,0.00006564215,0.000057068086,0.00014180367,0.00002439519,0.00039934387,0.58375376,0.0011998628,0.26515666,0.00021489647],"about_ca_topic_score_codex":0.0000042884644,"about_ca_topic_score_gemma":0.0000061445553,"teacher_disagreement_score":0.37509596,"about_ca_system_score_codex":0.000011524301,"about_ca_system_score_gemma":0.00041386118,"threshold_uncertainty_score":0.39931273},"labels":[],"label_agreement":null},{"id":"W2001079898","doi":"10.1172/jci10714","title":"Late seroconversion in HIV-resistant Nairobi prostitutes despite pre-existing HIV-specific CD8+ responses","year":2001,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":222,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; University of Toronto","funders":"Medical Research Council; Medical Research Council Canada; Elizabeth Glaser Pediatric AIDS Foundation; Rockefeller Foundation","keywords":"Seroconversion; Epitope; CTL*; Virology; Immunology; Cytotoxic T cell; Biology; HIV vaccine; HIV Antigens; Antigen; Antibody; CD8; Medicine; Virus; Viral disease; Vaccine trial; Genetics","score_opus":0.10567943926186349,"score_gpt":0.3657552754681462,"score_spread":0.2600758362062827,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2001079898","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.74705243,0.003762466,0.00010781545,0.24574824,0.0017654649,0.00077851734,0.00018892792,0.000046129862,0.00055003073],"genre_scores_gemma":[0.31297132,0.023120994,0.016151246,0.32859775,0.023730392,0.00026498135,0.013851661,0.00066956016,0.2806421],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9938375,0.0021858597,0.0026302037,0.0004775741,0.00026784194,0.0006010503],"domain_scores_gemma":[0.99450064,0.0026879215,0.0019128073,0.0003674474,0.00040705502,0.00012412101],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.0028713879,0.00038750764,0.001095427,0.00057285326,0.00018486097,0.00007542812,0.00045572047,0.0015101492,0.0002905556],"category_scores_gemma":[0.0026089367,0.00030392516,0.00044090577,0.00030153088,0.000720576,0.00032321276,0.00010468644,0.004528466,0.0009115966],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00316693,0.0002369725,0.0571338,0.00015590173,0.00039494553,0.002547454,0.00026365215,0.00003360233,0.010882138,0.000028100785,0.9222335,0.0029229855],"study_design_scores_gemma":[0.0042250366,0.0011311887,0.046298932,0.0015367647,0.00011216181,0.00020914231,0.000030215813,0.000007422489,0.0022556633,0.0006879661,0.9431858,0.00031971477],"about_ca_topic_score_codex":0.000035621364,"about_ca_topic_score_gemma":0.00001900153,"teacher_disagreement_score":0.4340811,"about_ca_system_score_codex":0.00024726914,"about_ca_system_score_gemma":0.00076409715,"threshold_uncertainty_score":0.9999413},"labels":[],"label_agreement":null},{"id":"W2001200618","doi":"10.1172/jci31992","title":"Synergistic airway gland mucus secretion in response to vasoactive intestinal peptide and carbachol is lost in cystic fibrosis","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cystic Fibrosis Research Advances","field":"Medicine","cited_by":99,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; U.S. Public Health Service; Stanford Bio-X; Yonsei University College of Medicine; Yonsei University; Cystic Fibrosis Foundation","keywords":"Vasoactive intestinal peptide; Mucus; Submucosal glands; Cystic fibrosis; Cystic fibrosis transmembrane conductance regulator; Secretion; Exocrine gland; Endocrinology; Internal medicine; Acetylcholine; Carbachol; Biology; Neuropeptide; Medicine; Receptor","score_opus":0.04808780989089693,"score_gpt":0.40000897946695113,"score_spread":0.3519211695760542,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2001200618","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929623,0.00023027611,0.0029265087,0.0032346537,0.00015393528,0.00035026122,0.0000062492954,0.0000063976277,0.0001294439],"genre_scores_gemma":[0.9786573,0.00004851907,0.020294707,0.0005328392,0.00028604732,0.0000050269646,0.000004546874,0.000016962946,0.00015406945],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9964873,0.0005129726,0.0017613714,0.00027629692,0.0006516248,0.00031039192],"domain_scores_gemma":[0.991889,0.0062981057,0.00052517006,0.00017033448,0.00042520784,0.00069216103],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.007595429,0.0001574575,0.00059574103,0.00066241546,0.000030004718,0.000034000175,0.000101101476,0.00015245275,0.000040377272],"category_scores_gemma":[0.03509391,0.00013305087,0.000095852556,0.0006536656,0.00029192911,0.00027560416,0.000049541755,0.00091690605,0.000016548347],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.02973019,0.0002729614,0.8540372,0.00013867789,0.000049125687,0.000610483,0.001170142,0.00024379256,0.10278855,0.000042208976,0.0006397332,0.010276924],"study_design_scores_gemma":[0.0035480666,0.0035827465,0.9818678,0.0019896824,0.000063693624,0.00016018511,0.00033295195,0.0011662518,0.004992972,0.0012774437,0.0008872238,0.00013097192],"about_ca_topic_score_codex":0.000105086365,"about_ca_topic_score_gemma":0.00021722932,"teacher_disagreement_score":0.1278306,"about_ca_system_score_codex":0.00030162858,"about_ca_system_score_gemma":0.00043452717,"threshold_uncertainty_score":0.9730339},"labels":[],"label_agreement":null},{"id":"W2001225006","doi":"10.1172/jci24013","title":"SDF-1 tells stem cells to mind their P’s and Ζ’s","year":2005,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Chemokine receptors and signaling","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency","funders":"","keywords":"Stromal cell; CXCR4; Stem cell; Cell biology; Chemokine; Receptor; Stromal cell-derived factor 1; Biology; Cancer research; Biochemistry","score_opus":0.10906605759361203,"score_gpt":0.36312921643963136,"score_spread":0.2540631588460193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2001225006","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5470802,0.0004194348,0.0001003487,0.45094755,0.0010163017,0.00022761182,0.000008671925,0.000006373243,0.00019349968],"genre_scores_gemma":[0.027413994,0.0007226238,0.010301769,0.90015525,0.05507606,0.0000027097908,0.000031897092,0.00009491215,0.006200792],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9966029,0.00019056583,0.0021603259,0.00027335063,0.00055312493,0.0002197165],"domain_scores_gemma":[0.9965777,0.0009848357,0.0013523272,0.00021389025,0.0003997312,0.00047155062],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0017399061,0.000260836,0.0011944532,0.00022185475,0.00003415444,0.000055122502,0.0001351327,0.0009267236,0.00016620844],"category_scores_gemma":[0.00037360983,0.0001826673,0.0004341248,0.00013755752,0.00014000668,0.00010440003,0.000040817653,0.0027449478,0.00004232826],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008096553,0.00004037641,0.0021458562,0.00013838988,0.00015833347,0.00012713402,0.00020122195,0.0000109093435,0.0036549435,0.0000012612569,0.94463587,0.048804734],"study_design_scores_gemma":[0.0011392724,0.00079088134,0.0010652936,0.0013388965,0.0003618301,0.00024194273,0.000040139927,0.00010047361,0.027413037,0.0001348323,0.9671584,0.00021501859],"about_ca_topic_score_codex":0.0000030661402,"about_ca_topic_score_gemma":0.0000010933855,"teacher_disagreement_score":0.5196662,"about_ca_system_score_codex":0.00006970764,"about_ca_system_score_gemma":0.0003840486,"threshold_uncertainty_score":0.99955577},"labels":[],"label_agreement":null},{"id":"W2001370885","doi":"10.1172/jci42004","title":"Lipocalin 2 is essential for chronic kidney disease progression in mice and humans","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Acute Kidney Injury Research","field":"Medicine","cited_by":397,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research; University Health Network","funders":"National Institutes of Health; Agence Nationale de la Recherche; March of Dimes Foundation","keywords":"Lipocalin; Nephron; Kidney disease; Kidney; Downregulation and upregulation; Cancer research; Renal function; Biology; Urinary system; Medicine; Internal medicine; Endocrinology; Gene","score_opus":0.06965766352198631,"score_gpt":0.4645098004082053,"score_spread":0.39485213688621895,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2001370885","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96054745,0.00013237556,0.00022463147,0.037969287,0.0005728371,0.00046655533,0.000027406559,0.000007753234,0.00005172174],"genre_scores_gemma":[0.9864338,0.00016885067,0.007265802,0.0031175513,0.0027134325,0.00001913286,0.00003842681,0.000021592277,0.000221382],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979003,0.000121016084,0.0011642209,0.00019234089,0.00043149397,0.00019061266],"domain_scores_gemma":[0.9972538,0.00040631476,0.0005097413,0.00015578502,0.00037722455,0.0012971738],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0023521476,0.00010265781,0.00038091766,0.00016173866,0.00005184308,0.000033639222,0.00011045217,0.00020022127,0.00011674166],"category_scores_gemma":[0.009908894,0.00007712251,0.00016247091,0.00013746394,0.00038717838,0.00022826315,0.00003813128,0.0010047901,0.000006058201],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0050272434,0.00091115595,0.6203298,0.00087365403,0.00015019007,0.00012735817,0.00043337635,0.0000011196389,0.14634727,0.00060786994,0.18205793,0.043133028],"study_design_scores_gemma":[0.03345094,0.0073821982,0.7244767,0.0033307062,0.00085025583,0.00016888914,0.00007896663,0.022900328,0.05638062,0.021863507,0.12859398,0.0005229382],"about_ca_topic_score_codex":0.0000038510393,"about_ca_topic_score_gemma":0.0000069564467,"teacher_disagreement_score":0.10414686,"about_ca_system_score_codex":0.000036389636,"about_ca_system_score_gemma":0.0016628507,"threshold_uncertainty_score":0.9984311},"labels":[],"label_agreement":null},{"id":"W2001487688","doi":"10.1172/jci43048","title":"Prevention of murine autoimmune diabetes by CCL22-mediated Treg recruitment to the pancreatic islets","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Diabetes and associated disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":114,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Child and Family Research Institute","funders":"Canadian Institutes of Health Research; Michael Smith Health Research BC; Child and Family Research Institute; Children's Hospital of Philadelphia","keywords":"NOD mice; FOXP3; CCL22; Immunology; IL-2 receptor; Pancreatic islets; Chemokine; Immune system; Islet; Autoimmunity; Nod; CD8; Biology; Medicine; T cell; Diabetes mellitus; Endocrinology; CXCL10","score_opus":0.07374213080268871,"score_gpt":0.33624503802602734,"score_spread":0.26250290722333863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2001487688","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997457,0.0006457463,0.0001366642,0.0010418337,0.0002483362,0.0002228844,0.000010691764,0.000003165941,0.00023365865],"genre_scores_gemma":[0.9976582,0.0003401771,0.00074627204,0.0007208376,0.0001351692,0.0000119424085,0.000059302427,0.0000111887275,0.00031692543],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99832124,0.00026622883,0.0009779789,0.0001184218,0.00018059871,0.00013555848],"domain_scores_gemma":[0.9984914,0.00008909375,0.00094874954,0.00016481619,0.00019525908,0.00011066663],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013838297,0.000094252326,0.00027821714,0.000032776414,0.000032602573,0.000009239657,0.00018825354,0.00012872014,0.000027025042],"category_scores_gemma":[0.001519662,0.000064567015,0.00020212833,0.00011938162,0.00009330394,0.000009899981,0.000040117182,0.00013331648,0.000005937362],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036349925,0.0015243735,0.2364024,0.00006900717,0.0012281697,0.0000018214041,0.00062205794,0.00010724718,0.62499195,0.000099761026,0.0700713,0.064518385],"study_design_scores_gemma":[0.0045101587,0.00853617,0.4641365,0.0004921162,0.0005439515,0.000002431308,0.00035836655,0.00038128084,0.4558549,0.0041213436,0.060625296,0.00043749428],"about_ca_topic_score_codex":0.000009165765,"about_ca_topic_score_gemma":0.000005425646,"teacher_disagreement_score":0.2277341,"about_ca_system_score_codex":0.000009374339,"about_ca_system_score_gemma":0.00009879307,"threshold_uncertainty_score":0.26329666},"labels":[],"label_agreement":null},{"id":"W2001712980","doi":"10.1172/jci11476","title":"Increased sensitivity to dextran sodium sulfate colitis in IRE1β-deficient mice","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Endoplasmic Reticulum Stress and Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":401,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Cancer Institute; School of Medicine, New York University; National Institutes of Health; Eusko Jaurlaritza; York University; Leukemia and Lymphoma Society","keywords":"Unfolded protein response; Endoplasmic reticulum; Colitis; Inflammatory bowel disease; Inflammation; Gastrointestinal tract; Biology; Immunology; Chemistry; Internal medicine; Medicine; Cell biology; Disease","score_opus":0.03490164561469482,"score_gpt":0.33654496242224446,"score_spread":0.30164331680754963,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2001712980","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974158,0.00009164517,0.0006084591,0.001182307,0.00025041567,0.00010994113,0.000009200706,0.0000031747095,0.00032908694],"genre_scores_gemma":[0.9968162,0.00017605152,0.0010732431,0.0014459861,0.00040502287,0.0000024668288,0.000018672556,0.00000953598,0.00005282351],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998198,0.0003662597,0.0008606388,0.00019114414,0.00020654511,0.0001774589],"domain_scores_gemma":[0.9987593,0.00012650536,0.00033913399,0.00014778298,0.00021006132,0.0004171599],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013559441,0.000104257975,0.00025633993,0.00006866042,0.000031435116,0.000024475865,0.00009147022,0.00013447607,0.000008774253],"category_scores_gemma":[0.0021248183,0.00009329735,0.00015909327,0.00013329733,0.00010128649,0.000010006365,0.0000363538,0.00017887149,0.000007836633],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022678573,0.00056020793,0.7321695,0.00003745097,0.00006222757,0.0004189827,0.00013991588,0.0018235057,0.2528262,0.00019027793,0.003606666,0.005897205],"study_design_scores_gemma":[0.0026467768,0.00072151585,0.9314407,0.00014363995,0.00005049425,0.00015079428,0.0001371685,0.00081480556,0.058244575,0.0006267857,0.004794698,0.00022803077],"about_ca_topic_score_codex":0.00008190667,"about_ca_topic_score_gemma":0.00022442122,"teacher_disagreement_score":0.19927123,"about_ca_system_score_codex":0.000017906266,"about_ca_system_score_gemma":0.00021151557,"threshold_uncertainty_score":0.38045552},"labels":[],"label_agreement":null},{"id":"W2001882980","doi":"10.1172/jci31368","title":"Priming and effector dependence on insulin B:9–23 peptide in NOD islet autoimmunity","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Diabetes and associated disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":108,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; University of California, San Francisco; National Institutes of Health; American Diabetes Association","keywords":"Autoimmunity; Effector; Islet; Nod; Priming (agriculture); Insulin; Endocrinology; Biology; Internal medicine; Immunology; Medicine; Diabetes mellitus; Immune system","score_opus":0.03243182464320188,"score_gpt":0.3399398233937225,"score_spread":0.3075079987505206,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2001882980","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987284,0.00025172302,0.00015447297,0.00035122136,0.00017741628,0.00006351129,0.0000015200013,0.0000024003944,0.00026932108],"genre_scores_gemma":[0.9978582,0.00019213672,0.0008655745,0.00083988765,0.00018811741,5.284049e-7,0.000010819897,0.000007526432,0.000037176083],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987288,0.00016958767,0.0006969051,0.00011869251,0.00014900394,0.00013700098],"domain_scores_gemma":[0.99899226,0.00026219102,0.0004535297,0.000093237286,0.00008812487,0.00011062772],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003077899,0.00008031444,0.00019766216,0.000057901812,0.000032748045,0.000017818591,0.000098596734,0.00018247784,0.000002351364],"category_scores_gemma":[0.0030721966,0.00006956934,0.00008158646,0.00007948799,0.00009709715,0.000010801145,0.000033376316,0.00034412928,0.0000032152172],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048685187,0.00036874381,0.69999146,0.0000395353,0.00009381356,0.000021841914,0.00017086147,0.00019888405,0.24828656,0.0001266435,0.0010641066,0.04915071],"study_design_scores_gemma":[0.0018617306,0.0010124276,0.955198,0.00016448606,0.00002121271,0.0000055350038,0.00009424247,0.00014747151,0.03883927,0.0008209341,0.001705036,0.0001296515],"about_ca_topic_score_codex":0.000012252869,"about_ca_topic_score_gemma":0.000037669048,"teacher_disagreement_score":0.25520656,"about_ca_system_score_codex":0.000013278384,"about_ca_system_score_gemma":0.00008179715,"threshold_uncertainty_score":0.36779284},"labels":[],"label_agreement":null},{"id":"W2003651863","doi":"10.1172/jci45114","title":"Smad4 deficiency in T cells leads to the Th17-associated development of premalignant gastroduodenal lesions in mice","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"IL-33, ST2, and ILC Pathways","field":"Immunology and Microbiology","cited_by":75,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Bone and Joint Health Institute; University of Calgary","funders":"Canadian Institutes of Health Research; Multiple Sclerosis Society; Canada Research Chairs; Multiple Sclerosis Society of Canada; National Institutes of Health; University of Calgary","keywords":"Biology; Lamina propria; Cytokine; Immunology; Hyperplasia; FOXP3; Cancer research; T cell; Interleukin 17; Epithelium; Endocrinology; Immune system","score_opus":0.125790722975281,"score_gpt":0.32121663798634276,"score_spread":0.19542591501106177,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2003651863","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99820596,0.00012979882,0.0002813793,0.00019259764,0.00068989,0.00015099427,0.000022339422,0.000004507648,0.00032254064],"genre_scores_gemma":[0.9972155,0.000033090368,0.002346691,0.00023506297,0.00003591703,0.000003282212,0.000007994076,0.0000069312673,0.000115526236],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99695307,0.0006403769,0.0019177729,0.00015139263,0.00009322804,0.00024413338],"domain_scores_gemma":[0.9983433,0.00037368067,0.00088659144,0.00012129719,0.00022241424,0.000052712476],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0037567508,0.00011193195,0.00041687736,0.00017278953,0.00006894073,0.0000049204923,0.00030627692,0.00022520337,0.000028407563],"category_scores_gemma":[0.0016809478,0.00007456928,0.00010313193,0.0003200875,0.00018731657,0.00010524059,0.000055910725,0.0005684698,0.000054150343],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005974514,0.0014611459,0.29744005,0.000042174266,0.000087723645,0.000018369341,0.020678174,0.0002210462,0.6710012,0.00060621067,0.0022640242,0.00558241],"study_design_scores_gemma":[0.0013316383,0.00059954484,0.6867909,0.00038669116,0.000030279241,0.000014798306,0.00053236994,0.000009918432,0.30862933,0.0006192385,0.0009411552,0.00011416193],"about_ca_topic_score_codex":0.000047232472,"about_ca_topic_score_gemma":0.0007212046,"teacher_disagreement_score":0.3893508,"about_ca_system_score_codex":0.00005401874,"about_ca_system_score_gemma":0.0006418167,"threshold_uncertainty_score":0.3040847},"labels":[],"label_agreement":null},{"id":"W2003926050","doi":"10.1172/jci16409","title":"Prediction of spontaneous autoimmune diabetes in NOD mice by quantification of autoreactive T cells in peripheral blood","year":2003,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Diabetes and associated disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":211,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Simon Fraser University; University of Alberta; BC Children's Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research; University of British Columbia; Fondation pour la Recherche Médicale; Children's Hospital Foundation; Michael Smith Health Research BC; Canadian Diabetes Association","keywords":"Immunology; Autoimmune diabetes; Autoimmunity; Peripheral blood; Type 1 diabetes; NOD mice; Major histocompatibility complex; Nod; Diabetes mellitus; Medicine; Avidity; Autoimmune disease; Peripheral; Antigen; Immune system; Endocrinology; Internal medicine; Antibody","score_opus":0.022124494155687322,"score_gpt":0.27187524140276176,"score_spread":0.24975074724707444,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2003926050","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99190146,0.0006654428,0.000016670892,0.00654465,0.00050782587,0.00017077224,0.000120688244,0.0000019994534,0.00007046641],"genre_scores_gemma":[0.98701745,0.00063731964,0.00043741002,0.01052618,0.0004043436,0.0000064025166,0.00073467736,0.000037636688,0.00019857335],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99661124,0.0005396145,0.0021214269,0.00024394784,0.0002928822,0.00019090567],"domain_scores_gemma":[0.9965767,0.00018645125,0.002726285,0.00017055005,0.00029379065,0.000046198405],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013071867,0.00018495505,0.0006857319,0.00014139675,0.000012175316,0.000011805476,0.00019892768,0.0010289558,0.000008044877],"category_scores_gemma":[0.0009440392,0.0001814722,0.0002705272,0.00017408121,0.00019090937,0.000016984335,0.000019048935,0.00092930614,4.2945462e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008163796,0.00049068546,0.0529022,0.0001437596,0.00025516955,0.000019024737,0.000066323526,0.00027971496,0.8732146,0.0000025962033,0.07198046,0.00056383683],"study_design_scores_gemma":[0.009491417,0.005339598,0.17172848,0.0019011599,0.00087063096,0.000034598037,0.00030166478,0.0018255954,0.74110055,0.0011585243,0.06529299,0.00095481315],"about_ca_topic_score_codex":0.00004907398,"about_ca_topic_score_gemma":0.00001776194,"teacher_disagreement_score":0.13211405,"about_ca_system_score_codex":0.000036431233,"about_ca_system_score_gemma":0.00028999653,"threshold_uncertainty_score":0.79362494},"labels":[],"label_agreement":null},{"id":"W2004582153","doi":"10.1172/jci27208","title":"Desperately seeking sugar: glial cells as hypoglycemia sensors","year":2005,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation","funders":"Hospital for Sick Children","keywords":"GLUT2; Hypoglycemia; Glucagon; Glucose transporter; Secretion; Endocrinology; Internal medicine; Biology; Chemistry; Cell biology; Medicine; Diabetes mellitus; Insulin","score_opus":0.08464861577158506,"score_gpt":0.36111188110018966,"score_spread":0.2764632653286046,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004582153","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6400967,0.00020520898,0.000029745099,0.3523337,0.0030362653,0.00021991979,0.000006766038,0.000038793976,0.0040328624],"genre_scores_gemma":[0.03140438,0.00040805255,0.007487992,0.8894552,0.059468783,0.0000033433835,0.00009884931,0.000092404174,0.01158099],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9948546,0.0004923012,0.0028944393,0.0003245699,0.0010963323,0.00033773406],"domain_scores_gemma":[0.99420905,0.0018423653,0.0023113082,0.0003221689,0.000821528,0.00049355207],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.0015923739,0.000347126,0.0015142988,0.00031162027,0.00007104412,0.00008222849,0.00016747315,0.0015364477,0.00080704124],"category_scores_gemma":[0.005706197,0.00027276587,0.0007672987,0.00020900174,0.00031876934,0.00021446866,0.000027270053,0.004346897,0.00045280854],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004165504,0.000084810905,0.0040536844,0.0001631885,0.00038557293,0.00074158603,0.000067107576,0.000036912887,0.0073245033,0.000007965411,0.9848642,0.0018539451],"study_design_scores_gemma":[0.0051206946,0.0020986032,0.0029635807,0.0018245637,0.0018329857,0.0006776672,0.000041847394,0.0010030225,0.019821921,0.0008298748,0.96333,0.00045525556],"about_ca_topic_score_codex":0.000008946752,"about_ca_topic_score_gemma":4.4136144e-7,"teacher_disagreement_score":0.60869235,"about_ca_system_score_codex":0.0001524511,"about_ca_system_score_gemma":0.0012505928,"threshold_uncertainty_score":0.99997246},"labels":[],"label_agreement":null},{"id":"W2005785099","doi":"10.1172/jci35754","title":"Platelet glycoprotein Ibα forms catch bonds with human WT vWF but not with type 2B von Willebrand disease vWF","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Platelet Disorders and Treatments","field":"Medicine","cited_by":284,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"National Heart, Lung, and Blood Institute; National Institutes of Health; Georgia Institute of Technology; American Heart Association","keywords":"Von Willebrand disease; Von Willebrand factor; Platelet; Chemistry; Platelet Glycoprotein GPIb-IX Complex; Platelet membrane glycoprotein; Platelet adhesiveness; Mutant; Glycoprotein Ib; ADAMTS13; Thrombospondin; Glycoprotein; Biophysics; Metalloproteinase; Immunology; Biochemistry; Biology; Platelet aggregation","score_opus":0.06294040595608047,"score_gpt":0.3417059067807617,"score_spread":0.2787655008246812,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2005785099","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99591064,0.00013183197,0.000054993307,0.0026834868,0.00008927013,0.00036944932,0.0000072453395,0.000023581299,0.0007294712],"genre_scores_gemma":[0.9958116,0.00016550647,0.001538972,0.0014598495,0.00030883902,0.000006474724,0.000063442654,0.000035505975,0.00060983945],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99771935,0.00006982314,0.0010476627,0.00024332125,0.00067372766,0.0002461344],"domain_scores_gemma":[0.9976438,0.0001261291,0.0008410143,0.00024825608,0.0003925526,0.0007482464],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040329594,0.0002226719,0.00075247244,0.00011793115,0.00018483122,0.000025389945,0.00010417083,0.00015510865,0.000041804356],"category_scores_gemma":[0.00036629307,0.00013394494,0.00014028022,0.00024442753,0.0003994057,0.00036433985,0.000016172742,0.00055882573,0.000020790058],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.020707058,0.0016895966,0.9536825,0.00019176403,0.0011198622,0.011223223,0.00040108923,0.00017582059,0.002419505,0.0007641802,0.0035847048,0.004040731],"study_design_scores_gemma":[0.03271381,0.018004144,0.9264889,0.0013607778,0.0010410658,0.0031754684,0.00011266106,0.00025964295,0.0075385794,0.0038064101,0.004946194,0.00055238686],"about_ca_topic_score_codex":0.000047149362,"about_ca_topic_score_gemma":0.000057541627,"teacher_disagreement_score":0.027193606,"about_ca_system_score_codex":0.00004350499,"about_ca_system_score_gemma":0.00088600646,"threshold_uncertainty_score":0.5462116},"labels":[],"label_agreement":null},{"id":"W2006030544","doi":"10.1172/jci66387","title":"Giant axonal neuropathy–associated gigaxonin mutations impair intermediate filament protein degradation","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Skin and Cellular Biology Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":130,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier de l'Université Laval","funders":"National Institute of Neurological Disorders and Stroke; National Institute of General Medical Sciences; National Cancer Institute; National Institutes of Health","keywords":"Intermediate filament; Neurofilament; Vimentin; Peripherin; Cell biology; Signal transducing adaptor protein; Mutation; Ubiquitin ligase; Cytoskeleton; Biology; Proteasome; Ubiquitin; Aggresome; Gene; Molecular biology; Cell; Phosphorylation; Genetics; Immunology; Immunohistochemistry","score_opus":0.04955218141148766,"score_gpt":0.34514360424038487,"score_spread":0.2955914228288972,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2006030544","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99711686,0.00011626106,0.0007976164,0.0012753429,0.00030742298,0.00028661537,0.000005578281,0.0000064102255,0.00008788065],"genre_scores_gemma":[0.99699795,0.000073904484,0.0012685851,0.00037598074,0.00046176495,0.000023766399,0.00017097735,0.0000139172735,0.000613178],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9976707,0.0006385207,0.0010345195,0.00019236127,0.00026901494,0.00019489018],"domain_scores_gemma":[0.9982334,0.000102783175,0.00072896003,0.0001535935,0.00054242846,0.00023882824],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015292616,0.000117502925,0.00022929379,0.00007391805,0.00006784241,0.00004732055,0.000206379,0.00023234807,0.0000801206],"category_scores_gemma":[0.003438001,0.00009379683,0.00020516136,0.000116047515,0.0002743628,0.000022350037,0.000060133614,0.0003826163,0.000043317865],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012347822,0.00028175974,0.048290607,0.000013589331,0.00015576436,0.000025815481,0.00004719604,0.000045423698,0.9305011,0.00008807571,0.0059624943,0.014464681],"study_design_scores_gemma":[0.003236139,0.004446593,0.6882265,0.00018533714,0.00007859844,0.000149832,0.00018442923,0.003303311,0.29331,0.0041079577,0.0023950485,0.00037626634],"about_ca_topic_score_codex":0.000010486273,"about_ca_topic_score_gemma":0.000007378391,"teacher_disagreement_score":0.6399359,"about_ca_system_score_codex":0.000021624292,"about_ca_system_score_gemma":0.00029770914,"threshold_uncertainty_score":0.4115857},"labels":[],"label_agreement":null},{"id":"W2006306072","doi":"10.1172/jci27540","title":"Cyclooxygenases, microsomal prostaglandin E synthase-1, and cardiovascular function","year":2006,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Inflammatory mediators and NSAID effects","field":"Medicine","cited_by":337,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Heart, Lung, and Blood Institute; National Institute of General Medical Sciences; Heart and Stroke Foundation of Canada; National Institutes of Health; Pfizer","keywords":"Prostacyclin; Prostaglandin; Prostaglandin H2; Thromboxane; Thromboxane A2; Thromboxane-A synthase; Aspirin; ATP synthase; Enzyme; Microsome; Pharmacology; Knockout mouse; Cyclooxygenase; Adverse effect; Internal medicine; Endocrinology; Medicine; Chemistry; Receptor; Platelet; Biochemistry","score_opus":0.028102003048913814,"score_gpt":0.29972253915709063,"score_spread":0.2716205361081768,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2006306072","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964955,0.0016152373,0.00036947036,0.00037651445,0.00074707746,0.00019813504,0.0000019532813,0.000015513777,0.00018061344],"genre_scores_gemma":[0.995464,0.000116986375,0.0012429156,0.00031892626,0.002747773,0.0000025536115,0.0000088832985,0.000014438527,0.00008348326],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981329,0.00019259303,0.0010137552,0.00014587092,0.00038279613,0.00013212864],"domain_scores_gemma":[0.9986685,0.0002845109,0.0004332048,0.00014428017,0.00022816999,0.00024136768],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022415414,0.00011060267,0.00053031294,0.00010026313,0.00005478404,0.00002395608,0.00003294859,0.00017391915,0.000015520382],"category_scores_gemma":[0.0011182365,0.00008218482,0.00035206394,0.000104199265,0.00016551519,0.00016338649,0.000011701978,0.00035507075,0.000008174273],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009876342,0.00017380719,0.9509392,0.00024003566,0.00042561584,0.00029680942,0.00004087057,0.000064323445,0.023248436,0.00029464162,0.009408421,0.013880206],"study_design_scores_gemma":[0.004210031,0.001223582,0.965256,0.00029772433,0.00074592244,0.0004963272,0.000024074496,0.00027368887,0.010789092,0.0017492002,0.014803008,0.0001313548],"about_ca_topic_score_codex":0.00002293042,"about_ca_topic_score_gemma":0.0000037634122,"teacher_disagreement_score":0.014316795,"about_ca_system_score_codex":0.000022502018,"about_ca_system_score_gemma":0.00018420108,"threshold_uncertainty_score":0.33513996},"labels":[],"label_agreement":null},{"id":"W2007251599","doi":"10.1172/jci58818","title":"TRAF6 is an amplified oncogene bridging the RAS and NF-κB pathways in human lung cancer","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"NF-κB Signaling Pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":174,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; University of Toronto; BC Cancer Agency","funders":"National Cancer Institute; Canadian Institutes of Health Research","keywords":"Lung cancer; Carcinogenesis; Oncogene; Biology; Cancer research; Somatic cell; Cancer; Gene duplication; Gene; Genetics; Pathology; Medicine; Cell cycle","score_opus":0.1693963742779293,"score_gpt":0.38861740340011813,"score_spread":0.21922102912218883,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007251599","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980087,0.00058089243,0.0005681922,0.00039052908,0.0002299018,0.000105119376,0.000005897756,0.0000040637024,0.000106665044],"genre_scores_gemma":[0.99642146,0.000204991,0.0009707198,0.0015182259,0.0008281559,0.000004454858,0.000007996931,0.000016762631,0.000027226317],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982588,0.00028208477,0.0009216306,0.0002103497,0.00017487454,0.00015223285],"domain_scores_gemma":[0.9988061,0.00005286545,0.00061103696,0.00020281269,0.00015171822,0.00017543313],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019498253,0.000116972944,0.00024504782,0.000048784957,0.00008019797,0.000028275674,0.00020765436,0.00018483921,0.000021049218],"category_scores_gemma":[0.00034219335,0.000086632324,0.000107405656,0.00007928477,0.00021224408,0.000019664116,0.000043283737,0.00032670647,5.6901456e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000105880084,0.000085981264,0.13989745,0.00001684211,0.00006223309,0.000010490446,0.0010960521,0.00005217196,0.8526786,0.0001915681,0.00082839275,0.0049743266],"study_design_scores_gemma":[0.0016218008,0.00078617816,0.1459295,0.00015828462,0.00009281705,0.000038810842,0.00016283811,0.00088059786,0.8460991,0.0032856206,0.00071734656,0.00022714993],"about_ca_topic_score_codex":0.00008425375,"about_ca_topic_score_gemma":0.00011557479,"teacher_disagreement_score":0.0065795644,"about_ca_system_score_codex":0.00001518282,"about_ca_system_score_gemma":0.00020444841,"threshold_uncertainty_score":0.35327637},"labels":[],"label_agreement":null},{"id":"W2007349210","doi":"10.1172/jci32214","title":"Murine models of Omenn syndrome","year":2007,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Immunodeficiency and Autoimmune Disorders","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"School of Medicine, New York University; York University","keywords":"Immunology; Severe combined immunodeficiency; Immunodeficiency; Autoimmunity; Disease; Wiskott–Aldrich syndrome; RAG2; Immunodeficiency Syndrome; Immune dysregulation; Medicine; Pathogenesis; Biology; Immune system; Genetics; Pathology","score_opus":0.18942067401908494,"score_gpt":0.42081014405881223,"score_spread":0.2313894700397273,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007349210","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.002250049,0.99437493,0.00025958312,0.000032313914,0.0022929695,0.00022207205,0.00001341774,0.00001116848,0.0005434815],"genre_scores_gemma":[0.004391121,0.9946399,0.00017611557,0.000070556016,0.000027033477,0.0000025513234,0.0000769962,0.000028461354,0.0005872915],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99351203,0.00074689026,0.0051394473,0.00021173302,0.00012361759,0.0002662586],"domain_scores_gemma":[0.992768,0.0012226254,0.0053391834,0.00032813856,0.00031702936,0.000025009034],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004382583,0.00030220687,0.0030216998,0.00041463238,0.00006427059,0.000009180994,0.0005692239,0.0010495636,0.00014837187],"category_scores_gemma":[0.00091049296,0.00022153868,0.0014083637,0.00036760114,0.0006917691,0.00023130255,0.00007514449,0.0016329568,0.00010776137],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005000312,0.0002920379,0.000013291739,0.0027839409,0.0007605681,0.000023299626,0.00008534912,0.000026339854,0.00003613476,0.001110659,0.00032645304,0.99449193],"study_design_scores_gemma":[0.0010196931,0.000701324,0.00012476,0.011149062,0.0010782271,0.0008031225,0.000043500342,0.000004993213,0.00003452275,0.0032935922,0.9814782,0.00026897315],"about_ca_topic_score_codex":0.00000991154,"about_ca_topic_score_gemma":3.0983685e-7,"teacher_disagreement_score":0.99422294,"about_ca_system_score_codex":0.000034000812,"about_ca_system_score_gemma":0.00070396066,"threshold_uncertainty_score":0.9034085},"labels":[],"label_agreement":null},{"id":"W2007770885","doi":"10.1172/jci34088","title":"Mutations in the nervous system–specific HSN2 exon of WNK1 cause hereditary sensory neuropathy type II","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Ion Transport and Channel Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":118,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"Sensory system; Nervous system; Biology; Exon; Peripheral nervous system; Neuroscience; Sensory neuron; Point mutation; Gene isoform; Hereditary motor and sensory neuropathy; Genetics; Mutation; Central nervous system; Gene","score_opus":0.09290392131071465,"score_gpt":0.3202977262753699,"score_spread":0.22739380496465525,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007770885","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981598,0.00033784026,0.00021435742,0.00038394038,0.00065244985,0.00008933221,0.0000037864907,0.0000024151454,0.00015603067],"genre_scores_gemma":[0.9982763,0.00027378238,0.000312472,0.00013379831,0.0008859567,0.0000011990804,0.000048813854,0.00000897128,0.000058708203],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998336,0.00026114788,0.0009770622,0.00010935154,0.00023315493,0.00008328659],"domain_scores_gemma":[0.9988989,0.00007013674,0.0005227431,0.00015473354,0.00029225243,0.00006118726],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008058121,0.000078893034,0.00019544187,0.000059645572,0.00006943716,0.000004401714,0.00012667653,0.00013985674,0.0000050620765],"category_scores_gemma":[0.00020305588,0.00005767363,0.00013196023,0.0001509232,0.00017415259,0.00001387372,0.000010048092,0.0001994765,0.0000021387818],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002783833,0.0017016307,0.3374443,0.0003778637,0.00040327624,0.0016767182,0.0073263887,0.030288601,0.5848793,0.0028506645,0.018726537,0.01154093],"study_design_scores_gemma":[0.00249852,0.003042903,0.94122195,0.00022338743,0.00013492838,0.001423579,0.0014489564,0.0011071366,0.04205974,0.0008588947,0.0056917686,0.00028823724],"about_ca_topic_score_codex":0.0000051278184,"about_ca_topic_score_gemma":0.0000072273037,"teacher_disagreement_score":0.60377765,"about_ca_system_score_codex":0.000007903193,"about_ca_system_score_gemma":0.00013201786,"threshold_uncertainty_score":0.23518625},"labels":[],"label_agreement":null},{"id":"W2009878875","doi":"10.1172/jci33296","title":"Cholesterol in islet dysfunction and type 2 diabetes","year":2008,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Cholesterol and Lipid Metabolism","field":"Medicine","cited_by":165,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child and Family Research Institute; University of British Columbia","funders":"Canadian Institutes of Health Research; Killam Trusts; Michael Smith Health Research BC; Child and Family Research Institute","keywords":"Endocrinology; Islet; Internal medicine; Type 2 diabetes; ABCA1; Cholesterol; Diabetes mellitus; Context (archaeology); Insulin; Biology; Reverse cholesterol transport; Glucose homeostasis; Homeostasis; Pancreas; Insulin resistance; Medicine; Transporter; Lipoprotein; Gene; Biochemistry","score_opus":0.15060970827892547,"score_gpt":0.4193056563157181,"score_spread":0.26869594803679264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2009878875","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10151733,0.8961593,0.0000026124255,0.00033745522,0.0016268685,0.0002697752,0.0000017968349,0.000007857323,0.00007701232],"genre_scores_gemma":[0.00047632633,0.99518144,0.000319725,0.00076443935,0.0030629227,0.0000034617406,0.000023533417,0.000030032174,0.00013813707],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9962468,0.00042126665,0.0026316757,0.00021910293,0.0003260977,0.00015505966],"domain_scores_gemma":[0.9970515,0.00050742616,0.0017204264,0.0001877456,0.00021523083,0.0003176769],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013397483,0.00023899347,0.002489175,0.00035913798,0.000023206389,0.00002334158,0.00008525325,0.0005283774,0.000013312448],"category_scores_gemma":[0.002225394,0.00016469212,0.00043681104,0.00032990088,0.00019728938,0.00020229668,0.000029839743,0.0014129321,0.000019238756],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031857595,0.0000961428,0.0106935175,0.0024264972,0.00011454314,0.00001811596,0.00004276432,4.3710364e-7,0.000004010162,0.000009007364,0.0019306374,0.9846325],"study_design_scores_gemma":[0.0015971177,0.0005491141,0.0401581,0.014867946,0.0007881994,0.00040851638,0.000004483772,0.000014306848,0.0000026902728,0.00009663551,0.9413789,0.00013399852],"about_ca_topic_score_codex":0.000002553343,"about_ca_topic_score_gemma":0.0000015423698,"teacher_disagreement_score":0.98449844,"about_ca_system_score_codex":0.00004187633,"about_ca_system_score_gemma":0.00050013134,"threshold_uncertainty_score":0.6715949},"labels":[],"label_agreement":null},{"id":"W2009926432","doi":"10.1172/jci23334","title":"Glycyrrhizic acid alters Kaposi sarcoma–associated herpesvirus latency, triggering p53-mediated apoptosis in transformed B lymphocytes","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":96,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Center for AIDS Research, University of Washington; York University; National Institute of Allergy and Infectious Diseases; Elsa U. Pardee Foundation","keywords":"Apoptosis; Latency (audio); Virology; Sarcoma; Cancer research; Biology; Medicine; Immunology; Genetics; Pathology; Computer science","score_opus":0.04118993239321012,"score_gpt":0.3124120277157193,"score_spread":0.2712220953225092,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2009926432","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926354,0.0010959225,0.0001089827,0.0021241477,0.0033957576,0.0001550963,0.0000026645555,0.00003988602,0.00044212674],"genre_scores_gemma":[0.9968629,0.0008885818,0.00017784545,0.0012495097,0.0001755465,0.000005582603,0.00007203018,0.00001984414,0.00054814835],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9963562,0.0006879863,0.0023326566,0.00020340325,0.000111251094,0.00030853448],"domain_scores_gemma":[0.99767476,0.0007493333,0.0011331202,0.0001325475,0.00022687612,0.00008335809],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019020127,0.00019763362,0.00063066755,0.00032645822,0.000099067955,0.000029721572,0.0002008599,0.00050368527,0.00048156988],"category_scores_gemma":[0.0019434333,0.00017070268,0.00034704898,0.00033805185,0.00018960396,0.00068608334,0.000017015156,0.000945807,0.00028676816],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0030762905,0.0009172653,0.029031666,0.000029424024,0.0006003266,0.000008228296,0.001279691,0.00037951558,0.8970239,0.00007300515,0.008329734,0.05925091],"study_design_scores_gemma":[0.018850055,0.0016574138,0.07795542,0.00057520944,0.00022566566,0.00011794963,0.00046088744,0.0010614591,0.8398746,0.00032974943,0.058376458,0.00051511393],"about_ca_topic_score_codex":0.000070237285,"about_ca_topic_score_gemma":0.000059719037,"teacher_disagreement_score":0.058735795,"about_ca_system_score_codex":0.0002782995,"about_ca_system_score_gemma":0.00026382811,"threshold_uncertainty_score":0.69610536},"labels":[],"label_agreement":null},{"id":"W2010027879","doi":"10.1172/jci19796","title":"15-deoxy-Δ12,14-PGJ2: endogenous PPARγ ligand or minor eicosanoid degradation product?","year":2003,"lang":"nl","type":"letter","venue":"Journal of Clinical Investigation","topic":"Peroxisome Proliferator-Activated Receptors","field":"Biochemistry, Genetics and Molecular Biology","cited_by":94,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Transcription factor; Endogeny; Eicosanoid; Transcription (linguistics); Cell biology; Chemistry; Prostaglandin E2 receptor; Biology; Prostaglandin; Biochemistry; Receptor; Gene; Enzyme","score_opus":0.0902799630931075,"score_gpt":0.33308629960549363,"score_spread":0.24280633651238615,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2010027879","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94400924,0.004687966,0.0003269315,0.041170176,0.008226839,0.0010336558,0.00009367363,0.0000226284,0.00042890906],"genre_scores_gemma":[0.64640266,0.020826409,0.019293288,0.21649271,0.07183155,0.000120653014,0.0032653871,0.0007664756,0.021000842],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.98911077,0.0021622344,0.0053350152,0.0012611982,0.0012612027,0.0008695915],"domain_scores_gemma":[0.98925555,0.00050227466,0.0065027983,0.000985584,0.0019356393,0.0008181696],"candidate_categories":["metaresearch","metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.003607833,0.001024881,0.0019521421,0.00038065284,0.00028674235,0.00027123297,0.00094650465,0.0031075522,0.00028703627],"category_scores_gemma":[0.011016263,0.0008235499,0.0010821453,0.0005568105,0.0008523184,0.00010289648,0.00015655825,0.0040465263,0.00015546707],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011149168,0.0004844565,0.009544941,0.00034213427,0.0011280362,0.00018435108,0.000081696955,0.000044156008,0.5371231,0.00000455697,0.4447474,0.005200298],"study_design_scores_gemma":[0.0022890707,0.0023992767,0.00041927694,0.00037451572,0.00056857464,0.00082180265,0.00004155541,0.000016092692,0.63206637,0.00016182718,0.36008856,0.00075309107],"about_ca_topic_score_codex":0.000014195384,"about_ca_topic_score_gemma":0.000013183901,"teacher_disagreement_score":0.29760653,"about_ca_system_score_codex":0.00019880406,"about_ca_system_score_gemma":0.003850379,"threshold_uncertainty_score":0.99942154},"labels":[],"label_agreement":null},{"id":"W2010433305","doi":"10.1172/jci76737","title":"Cardiac-specific ablation of ARNT leads to lipotoxicity and cardiomyopathy","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Metabolism, Diabetes, and Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Heart, Lung, and Blood Institute; American Heart Association; Robert H. Lurie Comprehensive Cancer Center; National Cancer Institute; National Institutes of Health; Northwestern University","keywords":"Aryl hydrocarbon receptor nuclear translocator; Lipotoxicity; Internal medicine; Diabetic cardiomyopathy; Endocrinology; Biology; Beta oxidation; Steatosis; Gene knockdown; Cardiomyopathy; Medicine; Diabetes mellitus; Heart failure; Gene; Aryl hydrocarbon receptor; Transcription factor; Metabolism; Insulin resistance; Biochemistry","score_opus":0.03712460528525551,"score_gpt":0.32345176136852183,"score_spread":0.2863271560832663,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2010433305","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9849578,0.011931473,0.0021235002,0.00010385198,0.0006437321,0.000075364995,0.000004019289,0.0000017772853,0.00015844771],"genre_scores_gemma":[0.98767984,0.008036901,0.0020200422,0.0004492147,0.0017755858,0.000001920043,0.000006656341,0.000008814077,0.000021006772],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99853146,0.00027291384,0.0007653619,0.00014443438,0.00019405877,0.000091789734],"domain_scores_gemma":[0.9987954,0.00007148855,0.00049418566,0.00016227466,0.0002886215,0.0001880209],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020450968,0.00008024814,0.00035869298,0.000047572976,0.000023796103,0.000013939038,0.0000859083,0.00013888278,0.000004090789],"category_scores_gemma":[0.000944288,0.00006879421,0.00017006279,0.000073851224,0.00011250419,0.000010009286,0.000029114643,0.00012522715,0.0000019569043],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003540134,0.00006725517,0.1844098,0.0000606788,0.0001300316,5.8404106e-7,0.00017365646,0.0006455286,0.4474305,0.00061266916,0.0085150795,0.35760018],"study_design_scores_gemma":[0.001093962,0.0012867549,0.30404896,0.00008799746,0.000102434984,0.0000054304587,0.000033320233,0.00011230982,0.32482782,0.0019766102,0.366217,0.00020742089],"about_ca_topic_score_codex":0.000002795994,"about_ca_topic_score_gemma":0.0000018109446,"teacher_disagreement_score":0.3577019,"about_ca_system_score_codex":0.000006524879,"about_ca_system_score_gemma":0.00006955526,"threshold_uncertainty_score":0.28053465},"labels":[],"label_agreement":null},{"id":"W2010895111","doi":"10.1172/jci21047","title":"Splanchnic lipolysis in human obesity","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Adipose Tissue and Metabolism","field":"Medicine","cited_by":891,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Nutrition, Metabolism and Diabetes","funders":"National Center for Research Resources; National Institute of Diabetes and Digestive and Kidney Diseases; Deutsches Krebsforschungszentrum; Mayo Foundation for Medical Education and Research; Mayo Clinic","keywords":"Lipolysis; Splanchnic; Internal medicine; Adipose tissue; Endocrinology; Medicine; Obesity; Splanchnic Circulation; Intra-Abdominal Fat; Visceral fat; Hemodynamics; Insulin resistance","score_opus":0.09105230251329119,"score_gpt":0.41034344818866025,"score_spread":0.3192911456753691,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2010895111","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99582034,0.00043300886,0.00015678898,0.0027446419,0.00032872066,0.00008380539,3.6720647e-7,0.000008127602,0.00042420338],"genre_scores_gemma":[0.9932357,0.00017640639,0.003946212,0.0012104597,0.0012404801,6.303248e-7,0.0000035754667,0.000008022306,0.00017851235],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99817675,0.000089452515,0.0012487436,0.00009792887,0.00027465352,0.00011246435],"domain_scores_gemma":[0.9987983,0.00009454819,0.000562774,0.00013176039,0.00014402553,0.00026857035],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001507367,0.00007433048,0.0005043318,0.00015097219,0.000025711797,0.000007730976,0.00007167255,0.00014554802,0.000039847946],"category_scores_gemma":[0.0011584748,0.000058594713,0.0001925161,0.00020848765,0.000111935544,0.00016589205,0.000012393692,0.0005436055,0.00002226908],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025355638,0.0009940347,0.9451626,0.00008037856,0.00016875917,0.0004928428,0.0006656164,0.00020335584,0.028978912,0.0070593855,0.0012780635,0.014662525],"study_design_scores_gemma":[0.003694781,0.00051507127,0.96173805,0.00031691333,0.000207474,0.00012983632,0.000025934673,0.000009318982,0.0071512903,0.023420667,0.0027217155,0.00006896283],"about_ca_topic_score_codex":0.00003927215,"about_ca_topic_score_gemma":0.0000251713,"teacher_disagreement_score":0.021827623,"about_ca_system_score_codex":0.0000414719,"about_ca_system_score_gemma":0.00026556937,"threshold_uncertainty_score":0.2389423},"labels":[],"label_agreement":null},{"id":"W2011319917","doi":"10.1172/jci31772","title":"TNF-α induces leukemic clonal evolution ex vivo in Fanconi anemia group C murine stem cells","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":131,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Center for Research Resources; National Heart, Lung, and Blood Institute; National Cancer Institute; Cincinnati Children's Hospital Medical Center; National Institutes of Health; University of California, San Diego; University of Toronto; Hospital for Sick Children; Oregon Health and Science University","keywords":"Fanconi anemia; Stem cell; Biology; Haematopoiesis; Leukemia; Cancer research; Cytokine; Immunology; Myeloid leukemia; Molecular biology; Cell biology; DNA repair; Genetics; Gene","score_opus":0.03744131898778438,"score_gpt":0.3246957050305218,"score_spread":0.28725438604273745,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2011319917","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948442,0.00024375993,0.003492965,0.00012909484,0.0009829685,0.00011671642,0.0000025992456,0.0000073023557,0.00018039107],"genre_scores_gemma":[0.9939287,0.000094628085,0.0042546242,0.00037767805,0.0011476589,0.0000012404788,0.000009023771,0.0000149736015,0.000171502],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99744296,0.0002193953,0.0015401829,0.00024519156,0.00032363445,0.00022861997],"domain_scores_gemma":[0.9983255,0.0001279342,0.0009328899,0.0001876184,0.00019369327,0.00023230817],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0037136308,0.00014365226,0.00030501155,0.00012843194,0.00002960731,0.0000187452,0.00021430674,0.00040488303,0.000012843801],"category_scores_gemma":[0.0003421317,0.00013202346,0.00019116925,0.00016430311,0.00013259506,0.000027194314,0.00005871619,0.00045348902,0.000008015123],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022619954,0.00009899993,0.016499825,0.000018523333,0.000022983319,0.000023870194,0.000029177741,0.00011532431,0.9767629,0.00027094147,0.0007002514,0.005231019],"study_design_scores_gemma":[0.0016645186,0.0011650657,0.06992379,0.00010321659,0.000029516521,0.000071352166,0.0001253257,0.00014283348,0.92218816,0.0024762037,0.0019220192,0.00018800746],"about_ca_topic_score_codex":0.00001829183,"about_ca_topic_score_gemma":0.000064331085,"teacher_disagreement_score":0.054574728,"about_ca_system_score_codex":0.00009218684,"about_ca_system_score_gemma":0.00027562876,"threshold_uncertainty_score":0.53837603},"labels":[],"label_agreement":null},{"id":"W2013845729","doi":"10.1172/jci59763","title":"Informed reasoning: repositioning of nitisinone to treat oculocutaneous albinism","year":2011,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"melanin and skin pigmentation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; National Institute of Arthritis and Musculoskeletal and Skin Diseases; School of Medicine, New York University; York University","keywords":"Oculocutaneous albinism; Hypopigmentation; Albinism; Melanin; Medicine; Dermatology; Genetics; Biology","score_opus":0.0578510486069856,"score_gpt":0.3551206380726573,"score_spread":0.2972695894656717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013845729","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94889134,0.0002904531,0.0015603371,0.03989792,0.0017446303,0.00037191182,0.000030082096,0.000009527828,0.0072037866],"genre_scores_gemma":[0.29007557,0.0015845159,0.06054046,0.60380644,0.028028954,0.000025779773,0.002528652,0.00019083811,0.01321879],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9969634,0.00025899368,0.002003401,0.00022380137,0.00038311785,0.00016730475],"domain_scores_gemma":[0.9964745,0.000208864,0.0023474228,0.00028362748,0.0005157152,0.00016985329],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00073762116,0.00019352364,0.00054136704,0.00013465411,0.000043058266,0.000028948867,0.00023375098,0.0008571435,0.000041480474],"category_scores_gemma":[0.0023827562,0.00017298001,0.00032527582,0.000090284964,0.00014102957,0.0000131937995,0.000047449917,0.0006619397,0.000007811032],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024243431,0.000040139676,0.001693719,0.00012074734,0.00015401849,0.00019259591,0.0001857321,0.000036248704,0.020781761,0.000024113333,0.97510374,0.0014247722],"study_design_scores_gemma":[0.004509605,0.013346753,0.01027618,0.003662572,0.0012128744,0.004018581,0.00016544119,0.00005466027,0.33513188,0.0034641826,0.6228088,0.0013484771],"about_ca_topic_score_codex":0.00001838966,"about_ca_topic_score_gemma":0.0000050555495,"teacher_disagreement_score":0.6588158,"about_ca_system_score_codex":0.000024576351,"about_ca_system_score_gemma":0.00049950735,"threshold_uncertainty_score":0.705392},"labels":[],"label_agreement":null},{"id":"W2013908114","doi":"10.1172/jci64840","title":"Osteoclast-specific cathepsin K deletion stimulates S1P-dependent bone formation","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Bone Metabolism and Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":326,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Clinical Research Institute","funders":"Harvard NeuroDiscovery Center","keywords":"Cathepsin K; Osteoclast; Bone resorption; Osteoblast; Endocrinology; RANKL; Internal medicine; Biology; Bone remodeling; Resorption; Cathepsin; Sphingosine; Cell biology; Chemistry; Receptor; Biochemistry; Medicine; In vitro","score_opus":0.0439522180613512,"score_gpt":0.3193938105348186,"score_spread":0.2754415924734674,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013908114","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9925425,0.0014567614,0.004440006,0.00081814337,0.00047753184,0.00014348405,0.000004434072,0.000006274759,0.00011084431],"genre_scores_gemma":[0.9948782,0.00055887236,0.0027611002,0.0005818704,0.0010289948,0.0000049923015,0.000058234396,0.000012075212,0.00011570811],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99816054,0.00020663746,0.0011019518,0.0001398454,0.0002626488,0.00012836717],"domain_scores_gemma":[0.9983198,0.000066939705,0.00076166366,0.00016999226,0.00045599134,0.00022558449],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00080718263,0.00010884002,0.00023892814,0.00006095168,0.000051750852,0.00006106137,0.00011356798,0.00016795367,0.000058068737],"category_scores_gemma":[0.0007186104,0.00008803764,0.00019068945,0.00006739084,0.000103618026,0.000059630853,0.00003464653,0.00016025144,0.00005959977],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045473265,0.00042496301,0.034758106,0.00005965969,0.00009948801,0.000012751987,0.00014571664,0.0011789305,0.839573,0.00044895476,0.050390698,0.07245299],"study_design_scores_gemma":[0.006560504,0.0021707946,0.4810818,0.00019232156,0.0002481866,0.00028496562,0.00038608038,0.002433262,0.43785012,0.017032584,0.051049497,0.0007098639],"about_ca_topic_score_codex":0.000008510438,"about_ca_topic_score_gemma":0.0000035062158,"teacher_disagreement_score":0.4463237,"about_ca_system_score_codex":0.000009831052,"about_ca_system_score_gemma":0.00009702451,"threshold_uncertainty_score":0.35900706},"labels":[],"label_agreement":null},{"id":"W2014454255","doi":"10.1172/jci22329","title":"The chromatin-remodeling protein ATRX is critical for neuronal survival during corticogenesis","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Genetics and Neurodevelopmental Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":189,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Institute of Neurosciences, Mental Health and Addiction; Ottawa Public Health","funders":"Canadian Institutes of Health Research","keywords":"ATRX; Corticogenesis; Forebrain; Biology; Neocortex; Clusterin; Chromatin remodeling; Chromatin; Progenitor cell; Neuroscience; Cell biology; Stem cell; Gene; Genetics; Apoptosis; Mutation","score_opus":0.0590363364100671,"score_gpt":0.357584034889507,"score_spread":0.2985476984794399,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2014454255","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992407,0.00021931219,0.0015232471,0.0053490344,0.00029321018,0.00015853114,0.0000043323853,0.0000028850986,0.000042427902],"genre_scores_gemma":[0.9905594,0.0002031929,0.007843295,0.0007285954,0.0005101788,0.0000077593195,0.000004723411,0.000018046225,0.00012478525],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99831384,0.0001145934,0.0009852262,0.00017320167,0.00023502958,0.00017810968],"domain_scores_gemma":[0.998933,0.00015074242,0.00034979518,0.00013201796,0.0002856506,0.00014879607],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008296003,0.00010431198,0.00016810463,0.000020096646,0.00018644679,0.00004593266,0.00018200581,0.00010372983,0.000005854875],"category_scores_gemma":[0.0019705447,0.0000788243,0.00020830543,0.000043929183,0.00016367983,0.00000965374,0.0000489537,0.0001386652,0.0000031865466],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002715848,0.00007201493,0.0036660582,0.000027356446,0.000050537146,7.215005e-7,0.0000263346,0.00037589617,0.9831545,0.00014296066,0.00079560094,0.011416458],"study_design_scores_gemma":[0.0025992873,0.0012823472,0.2757872,0.000087120185,0.00009592383,0.000039221628,0.00011196784,0.0059213527,0.6822092,0.0025527056,0.028948162,0.00036550686],"about_ca_topic_score_codex":7.079317e-7,"about_ca_topic_score_gemma":0.000007253921,"teacher_disagreement_score":0.30094528,"about_ca_system_score_codex":0.000008229799,"about_ca_system_score_gemma":0.00018303015,"threshold_uncertainty_score":0.32143617},"labels":[],"label_agreement":null},{"id":"W2014884192","doi":"10.1172/jci45589","title":"Mouse and human lung fibroblasts regulate dendritic cell trafficking, airway inflammation, and fibrosis through integrin αvβ8–mediated activation of TGF-β","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Neonatal Respiratory Health Research","field":"Medicine","cited_by":195,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Liver Center, University of California, San Francisco; National Institute of Neurological Disorders and Stroke; National Institute of Allergy and Infectious Diseases; Burroughs Wellcome Fund; University of California, San Francisco; National Institutes of Health; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; Gladstone Institutes","keywords":"Chemokine; Fibroblast; Immunology; Immune system; Fibrosis; Inflammation; Cell biology; Acquired immune system; Lung; Integrin; Biology; Dendritic cell; Medicine; Cell; Pathology; Cell culture; Internal medicine","score_opus":0.11496029367965895,"score_gpt":0.40149536486429505,"score_spread":0.2865350711846361,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2014884192","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99824524,0.0002675418,0.00021595518,0.0006929679,0.00006758242,0.00031703018,0.0000026634946,0.0000145141485,0.00017650829],"genre_scores_gemma":[0.99557894,0.00030473055,0.0035755404,0.00019373413,0.00021444188,0.000003433543,0.000009341032,0.000021681704,0.00009816053],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99690115,0.0003462643,0.001842147,0.00019551648,0.0005299657,0.00018494588],"domain_scores_gemma":[0.9966874,0.00081557065,0.0012294463,0.00017281194,0.0006889594,0.00040580812],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019061768,0.00013772484,0.00051612436,0.0002125908,0.000075921074,0.00001898306,0.000087814806,0.0002492448,0.000046622645],"category_scores_gemma":[0.0035621945,0.00011419421,0.000090885915,0.00021783833,0.00044435862,0.0005938282,0.00003580315,0.0006911314,0.000002487087],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0028107425,0.00047810155,0.19864617,0.004790988,0.0002087117,0.000042945423,0.0058095194,0.000040718038,0.75524217,0.0015049916,0.0012403544,0.029184593],"study_design_scores_gemma":[0.004862642,0.003450971,0.37423852,0.0017802209,0.00013201385,0.00004091813,0.00023724361,0.0010335185,0.6112562,0.001965978,0.0008263927,0.0001754197],"about_ca_topic_score_codex":0.00004803453,"about_ca_topic_score_gemma":0.000013013361,"teacher_disagreement_score":0.17559235,"about_ca_system_score_codex":0.000058423517,"about_ca_system_score_gemma":0.00034203572,"threshold_uncertainty_score":0.46567047},"labels":[],"label_agreement":null},{"id":"W2015230474","doi":"10.1172/jci11871","title":"A major role for VCAM-1, but not ICAM-1, in early atherosclerosis","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cell Adhesion Molecules Research","field":"Medicine","cited_by":1206,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; Toronto General Hospital; University of Toronto","funders":"National Heart, Lung, and Blood Institute; Canadian Institutes of Health Research; National Institutes of Health; Heart and Stroke Foundation of Canada; American Heart Association","keywords":"VCAM-1; LDL receptor; Biology; ICAM-1; Cell adhesion molecule; Cholesterol; Null allele; Phenotype; Internal medicine; Endocrinology; Lipoprotein; Immunology; Medicine; Gene; Genetics","score_opus":0.14516416262297396,"score_gpt":0.41801981776737457,"score_spread":0.2728556551444006,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2015230474","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9914827,0.00007288177,0.0005737056,0.0069662207,0.00017778041,0.00039699298,0.000002844656,0.000010577161,0.00031630718],"genre_scores_gemma":[0.98724514,0.00022633345,0.008752015,0.0017985234,0.0007022941,0.000013621403,0.000004577127,0.000028233802,0.0012292886],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9969752,0.00021643976,0.0017043074,0.00020350808,0.00063842477,0.0002621606],"domain_scores_gemma":[0.99718386,0.0010086744,0.00059980346,0.00021334301,0.0005107312,0.00048360977],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0028373331,0.00011992761,0.0005687796,0.00025055523,0.000041049094,0.000036029058,0.00016959502,0.00022970505,0.000083129686],"category_scores_gemma":[0.005721948,0.00009661235,0.0003609733,0.00032622035,0.00017486188,0.00017769191,0.00003561541,0.0006817598,0.00004152727],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0028468063,0.00061506726,0.7767699,0.000066694134,0.00008588503,0.00007194218,0.00023821482,0.00001670595,0.19736688,0.00023009762,0.0021447653,0.019547088],"study_design_scores_gemma":[0.006636623,0.0023060364,0.9556488,0.0003274487,0.000085660315,0.00007076415,0.000094918374,0.0016215468,0.023915648,0.0035214394,0.005651857,0.000119251585],"about_ca_topic_score_codex":0.000041378964,"about_ca_topic_score_gemma":0.000019967298,"teacher_disagreement_score":0.17887896,"about_ca_system_score_codex":0.00008205855,"about_ca_system_score_gemma":0.0003694358,"threshold_uncertainty_score":0.685012},"labels":[],"label_agreement":null},{"id":"W2015847142","doi":"10.1172/jci28334","title":"Myelin oligodendrocyte glycoprotein–specific T and B cells cooperate to induce a Devic-like disease in mice","year":2006,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Multiple Sclerosis Research Studies","field":"Medicine","cited_by":335,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Neurological Disorders and Stroke; National Institute of Allergy and Infectious Diseases; National Institutes of Health; National Multiple Sclerosis Society","keywords":"Myelin oligodendrocyte glycoprotein; Multiple sclerosis; Experimental autoimmune encephalomyelitis; Myelin; Pathology; Spinal cord; Immunology; Demyelinating disease; Encephalomyelitis; Genetically modified mouse; Oligodendrocyte; Biology; Medicine; Transgene; Central nervous system; Neuroscience","score_opus":0.10309803955817218,"score_gpt":0.38292683697913515,"score_spread":0.279828797420963,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2015847142","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9919558,0.0008621968,0.00014373088,0.006212092,0.00024107349,0.00047722968,0.0000056581307,0.000009761548,0.00009243782],"genre_scores_gemma":[0.9907675,0.0010904251,0.0057314364,0.0012685215,0.0009030069,0.000012027992,0.0000047269687,0.000017843204,0.00020451758],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9970094,0.00030914732,0.0015911064,0.0002560822,0.00058413786,0.00025014215],"domain_scores_gemma":[0.9976359,0.000547377,0.0003991564,0.00016135364,0.0005234514,0.00073273235],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020720775,0.00015144897,0.00058589404,0.00025082857,0.000057629793,0.000052319538,0.00011241053,0.00010960555,0.000020537193],"category_scores_gemma":[0.0024978241,0.00011947425,0.000114561386,0.00039483575,0.00022677777,0.00020383364,0.0000747049,0.000649826,0.000034395056],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0051290784,0.0009329137,0.60060334,0.0003636859,0.00013807605,0.0005852789,0.0005445259,0.0015497064,0.34328213,0.00019637679,0.024372945,0.02230193],"study_design_scores_gemma":[0.0036415388,0.00053510984,0.96994376,0.0008134812,0.000045500015,0.000013861199,0.000050842336,0.0010785918,0.016273353,0.00024628843,0.007212589,0.00014510668],"about_ca_topic_score_codex":0.00009956224,"about_ca_topic_score_gemma":0.000088924935,"teacher_disagreement_score":0.3693404,"about_ca_system_score_codex":0.00008559314,"about_ca_system_score_gemma":0.00034218206,"threshold_uncertainty_score":0.48720187},"labels":[],"label_agreement":null},{"id":"W2016146452","doi":"10.1172/jci11519","title":"Previously undetected human hematopoietic cell populations with short-term repopulating activity selectively engraft NOD/SCID-β2 microglobulin–null mice","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Hematopoietic Stem Cell Transplantation","field":"Medicine","cited_by":194,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; U.S. Public Health Service","keywords":"Haematopoiesis; Biology; Nod; Immunology; CD34; Severe combined immunodeficiency; Myeloid; CD38; Stem cell; Bone marrow; Hematopoietic stem cell; Cancer research; Cell biology; In vivo; Genetics","score_opus":0.10972215998777093,"score_gpt":0.3875863622972163,"score_spread":0.2778642023094454,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2016146452","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9885622,0.00007176717,0.009025103,0.00076211826,0.0002461166,0.00064898434,0.0000030613403,0.00007434512,0.0006062797],"genre_scores_gemma":[0.9737841,0.000045629236,0.025181754,0.00022996865,0.00048031742,0.000008868291,0.00003449312,0.000055265744,0.00017961206],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9955472,0.00049471384,0.0023838966,0.00041820062,0.00078948896,0.00036654284],"domain_scores_gemma":[0.9960167,0.0005653259,0.0017049499,0.0003354539,0.0008208446,0.00055674685],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0018178506,0.0003092477,0.00095216866,0.00024373068,0.0002240185,0.00006803798,0.00016454837,0.00033866987,0.00004947907],"category_scores_gemma":[0.00071459205,0.00025426733,0.00032599873,0.00061382144,0.00022043803,0.0004159066,0.000020033942,0.0010330445,0.000012433361],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00049221766,0.00043187104,0.8093933,0.00030720833,0.000121594305,0.0002373343,0.0006025509,0.000117391406,0.18734826,0.00004285434,0.00008681192,0.0008186045],"study_design_scores_gemma":[0.0034620918,0.001764516,0.9125356,0.001475675,0.0010169359,0.0029378806,0.0001352133,0.0006205135,0.0747275,0.00094392936,0.000047345824,0.0003327636],"about_ca_topic_score_codex":0.000060653892,"about_ca_topic_score_gemma":0.00011712393,"teacher_disagreement_score":0.11262077,"about_ca_system_score_codex":0.00017314522,"about_ca_system_score_gemma":0.0004573054,"threshold_uncertainty_score":0.99999094},"labels":[],"label_agreement":null},{"id":"W2016248729","doi":"10.1172/jci30440","title":"Hypothalamic resistin induces hepatic insulin resistance","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Adipokines, Inflammation, and Metabolic Diseases","field":"Medicine","cited_by":116,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Cancer Institute; University of Toronto; National Institutes of Health; American Diabetes Association","keywords":"Resistin; Internal medicine; Endocrinology; Insulin resistance; Proinflammatory cytokine; Hypothalamus; Medicine; Insulin; Hormone; Inflammation; Adipokine","score_opus":0.07178106880786851,"score_gpt":0.37010042133541177,"score_spread":0.29831935252754327,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2016248729","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9928594,0.0010680109,0.0006136305,0.0020059124,0.00068527344,0.00015599222,0.0000021478795,0.00002299019,0.0025865897],"genre_scores_gemma":[0.9846751,0.00040608126,0.009788849,0.001303147,0.002399343,0.000001310457,0.000010188037,0.000016857382,0.0013991072],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9965931,0.00017402868,0.0023239292,0.00015228723,0.0005748289,0.00018180501],"domain_scores_gemma":[0.99613607,0.0009308973,0.0015455144,0.0002140977,0.00068900327,0.00048441032],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.004209274,0.0001278702,0.0005582362,0.00020337771,0.00006278718,0.000020824229,0.000120180426,0.0001647442,0.00004623588],"category_scores_gemma":[0.0126247695,0.00010005093,0.00024348398,0.00030887514,0.00025220797,0.00027087104,0.000013133792,0.00041302884,0.000023306171],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0052707577,0.001182653,0.83049786,0.0007383568,0.0005946795,0.0005976116,0.0010981845,0.0000493634,0.027949061,0.009830671,0.017724602,0.10446619],"study_design_scores_gemma":[0.0020397059,0.00021906647,0.9648571,0.00048724213,0.00031089882,0.000044233013,0.00007312661,0.00003130752,0.0069587235,0.0073356167,0.017536417,0.0001065642],"about_ca_topic_score_codex":0.0000070241204,"about_ca_topic_score_gemma":0.00002964498,"teacher_disagreement_score":0.13435923,"about_ca_system_score_codex":0.000041033996,"about_ca_system_score_gemma":0.0005837064,"threshold_uncertainty_score":0.9956923},"labels":[],"label_agreement":null},{"id":"W2016511436","doi":"10.1172/jci9997","title":"A novel vascular smooth muscle chymase is upregulated in hypertensive rats","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Mast cells and histamine","field":"Immunology and Microbiology","cited_by":84,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; University of Toronto; Hospital for Sick Children","funders":"Medical Research Council; Medical Research Council Canada; Heart and Stroke Foundation of Canada","keywords":"Chymase; Vascular smooth muscle; Angiotensin II; Complementary DNA; Renin–angiotensin system; Internal medicine; Endocrinology; Biology; Molecular biology; Enzyme; Biochemistry; Medicine; Smooth muscle; Gene; Blood pressure","score_opus":0.057344061074939064,"score_gpt":0.30505347275542405,"score_spread":0.247709411680485,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2016511436","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954972,0.0010445785,0.0002453213,0.0019494707,0.00080279965,0.00009631634,0.0000036302622,0.000008820619,0.00035183574],"genre_scores_gemma":[0.99567986,0.0004602877,0.0007118272,0.0022087486,0.00016904222,0.0000013075152,0.000017706683,0.000012085134,0.000739148],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9980874,0.00020790428,0.0012841584,0.00016696392,0.00007155948,0.00018200345],"domain_scores_gemma":[0.9985327,0.00025180465,0.0006670182,0.00016734416,0.00030785415,0.000073241274],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011135783,0.000116551426,0.00050408643,0.00013508841,0.00005002281,0.000012381865,0.00014432313,0.00031030588,0.0005105627],"category_scores_gemma":[0.00075936125,0.00009421059,0.00022049666,0.00021406118,0.0002520107,0.00015176483,0.000026407075,0.0005489905,0.000077909],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032159363,0.0007940393,0.036741357,0.000025056303,0.00023549011,0.00010994618,0.0007617031,0.0001475403,0.92303234,0.0002448406,0.011471272,0.02611479],"study_design_scores_gemma":[0.007430407,0.0007292405,0.7674981,0.00024236701,0.00014964987,0.00014888574,0.00015119764,0.00039842338,0.013097287,0.0014862,0.20840527,0.0002630102],"about_ca_topic_score_codex":0.00007893029,"about_ca_topic_score_gemma":0.000035620054,"teacher_disagreement_score":0.90993506,"about_ca_system_score_codex":0.000023650135,"about_ca_system_score_gemma":0.00014954509,"threshold_uncertainty_score":0.55903035},"labels":[],"label_agreement":null},{"id":"W2016596969","doi":"10.1172/jci44929","title":"MEK-ERK pathway modulation ameliorates disease phenotypes in a mouse model of Noonan syndrome associated with the Raf1L613V mutation","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Protein Tyrosine Phosphatases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":234,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Princess Margaret Cancer Centre; Heart and Stroke Foundation; Ontario Institute for Cancer Research; University of Toronto","funders":"National Cancer Institute; National Heart, Lung, and Blood Institute; Canadian Institutes of Health Research; National Institutes of Health; Heart and Stroke Foundation of Canada","keywords":"Noonan syndrome; Costello syndrome; MAPK/ERK pathway; Mutation; Biology; Germline mutation; Cancer research; Endocrinology; Haploinsufficiency; Internal medicine; Phenotype; Kinase; Medicine; Genetics; Gene","score_opus":0.06381907646871447,"score_gpt":0.2980467769607393,"score_spread":0.2342277004920248,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2016596969","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951594,0.00036453948,0.0039523644,0.00026267892,0.000039857136,0.00017469507,0.000032964243,0.0000037688233,0.000009748642],"genre_scores_gemma":[0.9965858,0.000035034966,0.0030205105,0.00018927616,0.000048076305,0.0000075627086,0.0000749034,0.00001378178,0.00002507387],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985043,0.00021876632,0.0007989984,0.00013853685,0.00023757557,0.00010184353],"domain_scores_gemma":[0.9981423,0.00008571255,0.0011319735,0.00017245022,0.00035645184,0.00011113728],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011036573,0.00010455734,0.00023023617,0.00005475849,0.000030635114,0.00001151075,0.00015953217,0.00010796376,0.0000032369478],"category_scores_gemma":[0.0019416498,0.00007006988,0.000091436516,0.00013693671,0.00020464379,0.000035763853,0.000028247156,0.00016170974,7.40129e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0062659113,0.0020043706,0.37983304,0.00015660255,0.00071011775,0.000084807856,0.0015589121,0.15052168,0.4444561,0.005532617,0.00073371164,0.008142134],"study_design_scores_gemma":[0.0023584364,0.0015958961,0.46352282,0.00023140537,0.00012042982,0.000009015302,0.0000750875,0.036678348,0.48091683,0.014240856,0.00000982927,0.0002410193],"about_ca_topic_score_codex":0.000021189666,"about_ca_topic_score_gemma":0.00004980806,"teacher_disagreement_score":0.11384334,"about_ca_system_score_codex":0.000016902293,"about_ca_system_score_gemma":0.00031097632,"threshold_uncertainty_score":0.28573668},"labels":[],"label_agreement":null},{"id":"W2017839954","doi":"10.1172/jci66398","title":"An androgen receptor N-terminal domain antagonist for treating prostate cancer","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":311,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"National Cancer Institute; Medical Research and Materiel Command; Canadian Institutes of Health Research; DOD Prostate Cancer Research Program; Prostate Cancer UK","keywords":"Androgen receptor; Prostate cancer; Small molecule; Cancer research; Chemistry; Antagonist; splice; Androgen; Alternative splicing; Cell biology; Cancer; Receptor; Biology; Pharmacology; Computational biology; Hormone; Medicine; Internal medicine; Biochemistry; Gene; Gene isoform","score_opus":0.09595565761914551,"score_gpt":0.45022585827511646,"score_spread":0.3542702006559709,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2017839954","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99082124,0.00035577736,0.00008364096,0.007629705,0.00030888466,0.0006859859,0.000017431452,0.00001153244,0.000085800784],"genre_scores_gemma":[0.97253114,0.0006815033,0.022623511,0.000776501,0.0021269852,0.00010597669,0.00007212419,0.000029831233,0.0010524243],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981989,0.00013422311,0.0009991596,0.00015992716,0.0002999313,0.0002078172],"domain_scores_gemma":[0.99790496,0.00023612344,0.00060559466,0.000122561,0.00065386266,0.00047689673],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011285685,0.00010905354,0.00041485336,0.00008194974,0.000100166355,0.000065789216,0.00008278188,0.00010941104,0.00014317753],"category_scores_gemma":[0.00037459965,0.00007127201,0.00018555844,0.00011289872,0.00021294845,0.0004094405,0.000009529308,0.00027525454,0.000011568916],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025475244,0.00047860487,0.7563895,0.00023213385,0.00031023065,0.000049748454,0.0009185483,0.000013070963,0.068594985,0.00008003522,0.012248083,0.15813753],"study_design_scores_gemma":[0.053864717,0.03411788,0.6313657,0.0033173265,0.0012028203,0.0006001166,0.0026604198,0.006926373,0.19720577,0.028755527,0.03904821,0.00093511754],"about_ca_topic_score_codex":0.000050900588,"about_ca_topic_score_gemma":0.0000057872044,"teacher_disagreement_score":0.15720241,"about_ca_system_score_codex":0.00009274871,"about_ca_system_score_gemma":0.00063001807,"threshold_uncertainty_score":0.2906388},"labels":[],"label_agreement":null},{"id":"W2017869558","doi":"10.1172/jci37196","title":"Maturation of ureter-bladder connection in mice is controlled by LAR family receptor protein tyrosine phosphatases","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pregnancy and preeclampsia studies","field":"Medicine","cited_by":69,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"Kidney Foundation of Canada; McGill University","keywords":"Ureter; Biology; Morphogenesis; Craniofacial; Receptor tyrosine kinase; Cell biology; Internal medicine; Endocrinology; Kinase; Medicine; Genetics; Urology","score_opus":0.05172681769371858,"score_gpt":0.34835382691378186,"score_spread":0.2966270092200633,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2017869558","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9852373,0.005095076,0.00038259983,0.00825735,0.0002729959,0.0005517214,0.000015225963,0.000010312226,0.00017742632],"genre_scores_gemma":[0.99361914,0.00073199987,0.0028082207,0.0024115492,0.0002717005,0.000006668199,0.000031795204,0.000006981379,0.00011196614],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973512,0.00026370387,0.0017989676,0.00013951538,0.00033191856,0.00011464091],"domain_scores_gemma":[0.99778414,0.00035490605,0.0013113134,0.00010728329,0.0003325408,0.000109813],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014409696,0.00012334238,0.0007903727,0.00009949539,0.000033066462,0.000011700273,0.00006485065,0.00018924345,0.000032689615],"category_scores_gemma":[0.0027236354,0.00009266293,0.00020290373,0.00019601951,0.000116716365,0.00030285228,0.0000076284437,0.00040219678,0.0000041581234],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.022056255,0.0012930644,0.05883618,0.00022384859,0.00052778143,0.00002236186,0.0009265377,0.0000263823,0.83750683,0.0008495707,0.059498638,0.018232528],"study_design_scores_gemma":[0.04514468,0.008649024,0.45331076,0.0050524194,0.0006377647,0.00004208683,0.0003949876,0.0011200474,0.46999747,0.010574496,0.0047054337,0.00037085896],"about_ca_topic_score_codex":0.0000126652285,"about_ca_topic_score_gemma":0.0000019547679,"teacher_disagreement_score":0.39447457,"about_ca_system_score_codex":0.00003098504,"about_ca_system_score_gemma":0.000119088894,"threshold_uncertainty_score":0.37786847},"labels":[],"label_agreement":null},{"id":"W2018101086","doi":"10.1172/jci58457","title":"Tyrosine kinase pathways modulate tumor susceptibility to natural killer cells","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pediatric Oncology Group","funders":"National Institute of Allergy and Infectious Diseases; National Cancer Institute; National Institutes of Health; International Myeloma Foundation; Multiple Myeloma Research Foundation","keywords":"Biology; Lymphokine-activated killer cell; Natural killer cell; Cancer research; Cell; Effector; Gene silencing; Cell biology; Immunology; Interleukin 21; Gene; T cell; In vitro; Immune system; Cytotoxicity; Genetics","score_opus":0.05660253856159979,"score_gpt":0.3237374248741706,"score_spread":0.2671348863125708,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2018101086","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9597103,0.00052220636,0.00031797256,0.00071461784,0.038429245,0.00012426211,0.000001054856,0.000020736908,0.00015959762],"genre_scores_gemma":[0.99385893,0.000024255805,0.0006271072,0.0023449436,0.00058524334,0.0000017043742,0.000020668309,0.0000101334235,0.0025270067],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976573,0.00051112555,0.001356933,0.0001430841,0.00007888872,0.00025267372],"domain_scores_gemma":[0.9981903,0.00033668123,0.0007661165,0.00019505777,0.00037588857,0.00013598433],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0020959298,0.00013669688,0.0003796371,0.00011455232,0.00009302464,0.000018673143,0.00013668682,0.00017767894,0.000662181],"category_scores_gemma":[0.001568259,0.00010496836,0.00026453144,0.00013806213,0.00014358708,0.0005047197,0.000042391646,0.0007854929,0.00086366996],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006097117,0.00031671565,0.0216575,0.000011767274,0.000084239866,0.0000022506558,0.00032028544,0.00004334514,0.88354325,0.00020762929,0.08825518,0.0049481364],"study_design_scores_gemma":[0.0022146981,0.001120896,0.27322903,0.00012439885,0.00010685775,0.0001307659,0.00023780698,0.00008108454,0.5036902,0.0003422039,0.2184382,0.00028385862],"about_ca_topic_score_codex":0.000014023042,"about_ca_topic_score_gemma":0.0000029977332,"teacher_disagreement_score":0.37985304,"about_ca_system_score_codex":0.00006069303,"about_ca_system_score_gemma":0.000077872784,"threshold_uncertainty_score":0.9999143},"labels":[],"label_agreement":null},{"id":"W2018207852","doi":"10.1172/jci17271","title":"Mechano-oxidative coupling by mitochondria induces proinflammatory responses in lung venular capillaries","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Erythrocyte Function and Pathophysiology","field":"Medicine","cited_by":143,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"National Heart, Lung, and Blood Institute; National Institutes of Health","keywords":"Proinflammatory cytokine; Exocytosis; Mitochondrion; Cell biology; Mitochondrial ROS; Reactive oxygen species; Cytosol; Oxidative stress; Biology; Chemistry; Inflammation; Biochemistry; Secretion; Immunology","score_opus":0.06544586043290376,"score_gpt":0.364294336853772,"score_spread":0.2988484764208682,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2018207852","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99646705,0.0009034776,0.0002760347,0.001085599,0.0009730004,0.00018552868,0.0000017962436,0.000010672175,0.00009686173],"genre_scores_gemma":[0.9950423,0.00036977007,0.0029413928,0.0009921947,0.00040060066,0.0000049542214,0.000009055962,0.000015250223,0.0002244697],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99771094,0.00044923028,0.0012724948,0.0001570608,0.00026933325,0.00014095008],"domain_scores_gemma":[0.9977711,0.00076162367,0.000841451,0.00012632881,0.0002972405,0.00020227995],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0020227577,0.000114342314,0.00051344023,0.00016137281,0.000048808688,0.000014136652,0.000057032066,0.00024879994,0.000050967046],"category_scores_gemma":[0.008571191,0.00009349701,0.00013328611,0.00019786549,0.00019209072,0.00019806741,0.000009451837,0.00070059777,0.000010190727],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027131601,0.00033351412,0.23365347,0.00017749966,0.00019410785,0.00020031458,0.0011396826,0.00019530722,0.7456499,0.0020292168,0.013180315,0.0005335631],"study_design_scores_gemma":[0.018663753,0.00647554,0.353028,0.0027473313,0.00062136137,0.00070274965,0.0027091575,0.0031790005,0.54675275,0.025828384,0.038456146,0.0008358076],"about_ca_topic_score_codex":0.0000031358043,"about_ca_topic_score_gemma":0.0000029418745,"teacher_disagreement_score":0.19889708,"about_ca_system_score_codex":0.000058805752,"about_ca_system_score_gemma":0.0006305401,"threshold_uncertainty_score":0.99978006},"labels":[],"label_agreement":null},{"id":"W2019054215","doi":"10.1172/jci9594","title":"Nitric oxide and atrial natriuretic factor stimulate cGMP-dependent membrane insertion of aquaporin 2 in renal epithelial cells","year":2000,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Ion Transport and Channel Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":223,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institutes of Health; Heart and Stroke Foundation of Canada","keywords":"Aquaporin 2; Intracellular; cGMP-dependent protein kinase; Cell biology; Phosphorylation; Soluble guanylyl cyclase; Protein kinase A; Vasopressin; Apical membrane; Atrial natriuretic peptide; Chemistry; Biology; Nitric oxide; Biochemistry; Endocrinology; Membrane; Mitogen-activated protein kinase kinase","score_opus":0.0299319268108439,"score_gpt":0.30437965450076226,"score_spread":0.2744477276899184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2019054215","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99913263,0.00017879454,0.00020710188,0.00013321672,0.00020557424,0.00011090628,0.000008997652,0.000002207316,0.000020553656],"genre_scores_gemma":[0.9977609,0.0009179207,0.00042436563,0.00005019063,0.00073035917,5.1851424e-7,0.000024086667,0.000008554752,0.00008313859],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980213,0.00017608497,0.0012801134,0.00015530418,0.0002587878,0.000108423454],"domain_scores_gemma":[0.9990222,0.00006282269,0.000562662,0.00009495582,0.0001375155,0.000119830205],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008704948,0.00010568334,0.00029671536,0.0001005288,0.000020651643,0.000009649569,0.00008396273,0.00025482263,0.00004297254],"category_scores_gemma":[0.00017301297,0.000091484,0.00018204183,0.00011137769,0.00010556642,0.000024063884,0.000008207129,0.00021043251,0.000001992813],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015489886,0.000061127714,0.017863248,0.000030357003,0.00004537035,0.000008248811,0.000059173224,0.006633813,0.9617669,0.000017161155,0.000014481737,0.011951151],"study_design_scores_gemma":[0.0048139547,0.00084629114,0.21749973,0.00009058591,0.00008919394,0.00001666365,0.00002115978,0.0013223926,0.7730869,0.0013272807,0.0007078464,0.00017799244],"about_ca_topic_score_codex":0.000019221652,"about_ca_topic_score_gemma":0.000014514462,"teacher_disagreement_score":0.19963647,"about_ca_system_score_codex":0.0000108702625,"about_ca_system_score_gemma":0.00012383705,"threshold_uncertainty_score":0.37306094},"labels":[],"label_agreement":null},{"id":"W2019161989","doi":"10.1172/jci68035","title":"Loss-of-function mutations in SIM1 contribute to obesity and Prader-Willi–like features","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Genetic Syndromes and Imprinting","field":"Biochemistry, Genetics and Molecular Biology","cited_by":147,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Société Francophone du Diabète","keywords":"Haploinsufficiency; Obesity; Loss function; Internal medicine; Endocrinology; Biology; Gene; Genetics; Medicine; Phenotype","score_opus":0.03152585440061885,"score_gpt":0.32689034302281816,"score_spread":0.29536448862219933,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2019161989","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963778,0.00021284288,0.001593251,0.0013987839,0.0002449143,0.0001397781,0.0000016159544,0.0000013250856,0.000029684345],"genre_scores_gemma":[0.9952012,0.000094038514,0.003896669,0.00054594263,0.00017824712,0.0000027483422,0.000008004578,0.0000054425964,0.00006776621],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99884963,0.00010894431,0.00070960924,0.000119558514,0.000117735835,0.00009455085],"domain_scores_gemma":[0.9990003,0.000089726855,0.00041147333,0.00009284032,0.00026489198,0.00014074685],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00066099135,0.00006750887,0.00020049333,0.000054864937,0.00002412781,0.000020431771,0.000068490015,0.00013427586,0.000008298929],"category_scores_gemma":[0.0014771598,0.000057452206,0.000071961214,0.000087036206,0.00008553407,0.000013523996,0.000037610072,0.00014317661,0.000002640757],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010864191,0.00007275836,0.90758014,0.000021706663,0.00004807253,5.276008e-7,0.00008213997,0.0004417305,0.08203797,0.0000668801,0.001539009,0.008098215],"study_design_scores_gemma":[0.00060755434,0.0006051218,0.98964614,0.000048425467,0.000022362026,0.000023866196,0.00006842572,0.00010353072,0.0058741705,0.0019067555,0.0010314299,0.00006224408],"about_ca_topic_score_codex":0.000029723229,"about_ca_topic_score_gemma":0.000018680828,"teacher_disagreement_score":0.082065985,"about_ca_system_score_codex":0.0000054052707,"about_ca_system_score_gemma":0.00007621509,"threshold_uncertainty_score":0.2342833},"labels":[],"label_agreement":null},{"id":"W2019298465","doi":"10.1172/jci60981","title":"Combining Cep290 and Mkks ciliopathy alleles in mice rescues sensory defects and restores ciliogenesis","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Genetic and Kidney Cyst Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":80,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research; National Institutes of Health; College of Medicine, Seoul National University; National Institute on Deafness and Other Communication Disorders; National Eye Institute; Wellcome Trust; Seoul National University Bundang Hospital; Seoul National University","keywords":"Ciliopathies; Cilium; Ciliopathy; Ciliogenesis; Biology; Cell biology; Joubert syndrome; Intraflagellar transport; Bardet–Biedl syndrome; Genetics; Basal body; Mutant; Phenotype; Flagellum; Gene","score_opus":0.04957735038830351,"score_gpt":0.33425959680998174,"score_spread":0.2846822464216782,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2019298465","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99142253,0.007945241,0.000026531397,0.00030138865,0.00016890198,0.000058622507,0.0000032208186,0.000002409522,0.000071150636],"genre_scores_gemma":[0.9955276,0.0019414377,0.0014777186,0.0005785455,0.00042397334,0.0000015244835,0.000006514816,0.000009578858,0.000033066037],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99867433,0.0003022821,0.00060826476,0.0001370534,0.00013054938,0.00014753899],"domain_scores_gemma":[0.9990368,0.0001414281,0.00029912204,0.00008965039,0.00009379883,0.00033918253],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011653958,0.00009778259,0.00022713041,0.00006995212,0.000038087994,0.000017740902,0.0000612892,0.00015530812,0.000001937586],"category_scores_gemma":[0.0019491216,0.000084468986,0.000070593516,0.000054364158,0.00020720492,0.000015941554,0.000050857107,0.00010247612,7.6915455e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015775312,0.000061647515,0.7275026,0.00003136521,0.000025591053,0.0000042621677,0.00013475523,0.0000125984225,0.26988718,0.000022514667,0.0009776856,0.0011820446],"study_design_scores_gemma":[0.0010511274,0.00043109097,0.9308128,0.00008720146,0.000060644285,0.00005220891,0.0002693001,0.0000302782,0.06459203,0.00059380336,0.0018873212,0.00013219439],"about_ca_topic_score_codex":0.000009551419,"about_ca_topic_score_gemma":0.0000144094065,"teacher_disagreement_score":0.20529515,"about_ca_system_score_codex":0.0000048265256,"about_ca_system_score_gemma":0.00009862905,"threshold_uncertainty_score":0.34445453},"labels":[],"label_agreement":null},{"id":"W2019420982","doi":"10.1172/jci12159","title":"Modulation of T-cell responses to alloantigens by TR6/DcR3","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"RNA regulation and disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":112,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Centre Hospitalier de l’Université de Montréal; Hôpital Notre-Dame","funders":"National Cancer Institute; Canadian Institutes of Health Research; Heart And Stroke Foundation Of Quebec; Roche Organ Transplant Research Foundation; Kidney Foundation of Canada; Heart and Stroke Foundation of Canada","keywords":"Lymphokine; Cytotoxic T cell; Immune system; Biology; Immunology; Receptor; Cell biology; In vitro; Genetics","score_opus":0.054453761477642366,"score_gpt":0.36840423337718736,"score_spread":0.313950471899545,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2019420982","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994221,0.0001351712,0.00395963,0.0011636211,0.00017708904,0.00007632361,0.00000637801,0.0000025228587,0.00025827598],"genre_scores_gemma":[0.994946,0.00014980504,0.0025764431,0.0009061926,0.0002948666,8.325001e-7,0.000025133417,0.000008370868,0.0010923423],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99850684,0.00019402392,0.00089084764,0.00011766385,0.00020954099,0.00008110737],"domain_scores_gemma":[0.9986337,0.00006416336,0.0005936284,0.00014741358,0.0003064522,0.00025467374],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00080193946,0.00007153809,0.00018072578,0.00005867538,0.000023797056,0.000011422501,0.000104775914,0.00012096421,0.000023683138],"category_scores_gemma":[0.001339022,0.000063196865,0.00015791233,0.00010483122,0.00007261875,0.000011495653,0.000019297226,0.00007249128,0.000005692737],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007187828,0.00011760366,0.14716555,0.0000064804362,0.000020498126,0.0000019825193,0.000021297506,0.00052046066,0.83528256,0.000027255002,0.014088844,0.0020286625],"study_design_scores_gemma":[0.0021450156,0.0013799075,0.7142917,0.00004810146,0.000057413432,0.000017861068,0.00005051536,0.00093659246,0.2374378,0.0009328847,0.042514026,0.00018817691],"about_ca_topic_score_codex":0.000002870778,"about_ca_topic_score_gemma":0.000001940146,"teacher_disagreement_score":0.5978448,"about_ca_system_score_codex":0.000005982271,"about_ca_system_score_gemma":0.00015068945,"threshold_uncertainty_score":0.25770932},"labels":[],"label_agreement":null},{"id":"W2019449233","doi":"10.1172/jci33136","title":"Low-molecular-weight S-nitrosothiols and blood vessel injury","year":2007,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Nitric Oxide and Endothelin Effects","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"Canadian Institutes of Health Research; University of Toronto; King's College London; Heart and Stroke Foundation of Canada","keywords":"Acetylcysteine; Medicine; Hypoxia (environmental); Blood vessel; In vivo; Pathology; Antioxidant; Biology; Internal medicine; Chemistry; Biochemistry; Oxygen","score_opus":0.04107968079647417,"score_gpt":0.36289904367634146,"score_spread":0.3218193628798673,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2019449233","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6423873,0.0010279085,0.0003039576,0.35373855,0.0015060377,0.00034079733,0.000009576841,0.000027630851,0.00065823994],"genre_scores_gemma":[0.020239765,0.0011280016,0.005920867,0.9504001,0.021454798,0.000003356103,0.000057022247,0.00009157365,0.0007044802],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9957592,0.00040748517,0.0023487161,0.0003076062,0.00085803715,0.0003189765],"domain_scores_gemma":[0.9950235,0.0018213568,0.0019072536,0.00032366946,0.00053994637,0.0003843049],"candidate_categories":["research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.0029100652,0.00031916588,0.0013184055,0.0003940809,0.000042007465,0.00004712362,0.00016631788,0.0015241726,0.00004181198],"category_scores_gemma":[0.004600803,0.0002450953,0.00051304954,0.00024303433,0.00037052765,0.00015856621,0.000043399523,0.0047519794,0.00002885522],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000360138,0.00017308113,0.010731687,0.00076705444,0.0006306594,0.004553682,0.00003565828,5.65808e-7,0.0113923,0.000025254067,0.9657785,0.005551383],"study_design_scores_gemma":[0.012512579,0.0071220156,0.021112146,0.0071582845,0.0066821296,0.003779169,0.000015938407,0.000058001988,0.0807155,0.01136631,0.84844506,0.0010328585],"about_ca_topic_score_codex":0.000003935565,"about_ca_topic_score_gemma":1.7127226e-7,"teacher_disagreement_score":0.62214756,"about_ca_system_score_codex":0.00003365821,"about_ca_system_score_gemma":0.00053251354,"threshold_uncertainty_score":0.9997721},"labels":[],"label_agreement":null},{"id":"W2019535767","doi":"10.1172/jci63681","title":"IL-17A secretion by CD8+ T cells supports Th17-mediated autoimmune encephalomyelitis","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":253,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Ontario Institute for Cancer Research; University of Toronto","funders":"Gemeinnützige Hertie-Stiftung; Deutsche Forschungsgemeinschaft; Philipps-Universität Marburg","keywords":"Adoptive cell transfer; Experimental autoimmune encephalomyelitis; CD8; Immunology; Interleukin 17; Cytotoxic T cell; Autoimmunity; Interleukin 21; Biology; Interleukin 3; T cell; Multiple sclerosis; Immune system; In vitro","score_opus":0.031501001752118174,"score_gpt":0.29671541927859935,"score_spread":0.26521441752648117,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2019535767","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9858141,0.0043647215,0.00027634326,0.0014588091,0.0073522497,0.00016331897,0.000037860293,0.00005019714,0.00048240047],"genre_scores_gemma":[0.9946025,0.0010505692,0.00035989805,0.0008831156,0.0005087559,0.0000045375637,0.0003116448,0.000024273679,0.0022547022],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99578434,0.0010563185,0.002263633,0.0002255249,0.00013082555,0.0005393274],"domain_scores_gemma":[0.99642056,0.0010070265,0.0018173658,0.0002767041,0.00031091308,0.0001674429],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0028539344,0.00024602094,0.0007449339,0.00014802004,0.00015824652,0.000023484146,0.00031874556,0.0008383654,0.0013787028],"category_scores_gemma":[0.001090539,0.00020099964,0.0003442304,0.00020479472,0.00076839456,0.00060450274,0.000071880444,0.0012357443,0.00094421254],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013669838,0.00029675046,0.014359985,0.000012629003,0.0001902052,0.000007274605,0.00032754903,0.0000026292412,0.9394343,0.00016083465,0.04089974,0.0041714446],"study_design_scores_gemma":[0.0043724678,0.0014451549,0.07260004,0.00015342077,0.0002981657,0.0004505663,0.00034980857,0.00002407721,0.47577593,0.0015071018,0.44252542,0.00049786386],"about_ca_topic_score_codex":0.000048340233,"about_ca_topic_score_gemma":0.0000023484308,"teacher_disagreement_score":0.46365833,"about_ca_system_score_codex":0.000051943895,"about_ca_system_score_gemma":0.00023416284,"threshold_uncertainty_score":0.99983364},"labels":[],"label_agreement":null},{"id":"W2020396176","doi":"10.1172/jci32490","title":"Inhibition of ischemic cardiomyocyte apoptosis through targeted ablation of Bnip3 restrains postinfarction remodeling in mice","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cardiac electrophysiology and arrhythmias","field":"Medicine","cited_by":303,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; St. Boniface Hospital","funders":"National Heart, Lung, and Blood Institute","keywords":"Cardiology; Apoptosis; Ventricular remodeling; Myocardial infarction; Internal medicine; Ligation; Medicine; Ischemia; Biology","score_opus":0.0520219633076366,"score_gpt":0.359306710361466,"score_spread":0.3072847470538294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020396176","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99546564,0.00017962127,0.0026733577,0.0006297633,0.0002898212,0.0001577971,0.000002367337,0.0000072246653,0.0005944164],"genre_scores_gemma":[0.9899773,0.00024168538,0.008873054,0.00025441946,0.00060372555,6.3765634e-7,0.00002851433,0.000010724925,0.000009938206],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9969921,0.00018742884,0.0022102965,0.000141536,0.00032275793,0.00014588579],"domain_scores_gemma":[0.99710786,0.00048763244,0.0015659481,0.00011789058,0.00062952214,0.00009113335],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0028200361,0.00010191549,0.000648282,0.00022211092,0.000023936138,0.0000025550164,0.00003578263,0.00028368342,0.000005027639],"category_scores_gemma":[0.0023088872,0.00009294724,0.00033979592,0.0004116993,0.00020021066,0.00028687125,0.000011855438,0.0005991608,0.0000010287599],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016412118,0.00009104177,0.018594762,0.00009618695,0.000091460126,0.000013783756,0.00039918482,0.00249168,0.9732295,0.00012473609,0.00017134014,0.0030550568],"study_design_scores_gemma":[0.0026326927,0.000975746,0.26200584,0.0008423798,0.00023373749,0.00014368382,0.00018135905,0.0010531839,0.72907734,0.0026699363,0.00008109862,0.00010303292],"about_ca_topic_score_codex":0.000047683785,"about_ca_topic_score_gemma":0.0000052610967,"teacher_disagreement_score":0.24415223,"about_ca_system_score_codex":0.00007484492,"about_ca_system_score_gemma":0.00025416486,"threshold_uncertainty_score":0.3790278},"labels":[],"label_agreement":null},{"id":"W2020460921","doi":"10.1172/jci36882","title":"Identification of a bone marrow–derived epithelial-like population capable of repopulating injured mouse airway epithelium","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Neonatal Respiratory Health Research","field":"Medicine","cited_by":130,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; Sunnybrook Health Science Centre","funders":"Canadian Institutes of Health Research; Hospital for Sick Children; University of Toronto","keywords":"Bone marrow; Biology; Respiratory epithelium; Stromal cell; Progenitor cell; Population; Epithelium; Stem cell; Immunology; Cell biology; Pathology; Lung; Context (archaeology); Regeneration (biology); Cell type; Cell; Cancer research; Medicine; Internal medicine","score_opus":0.09867813191151116,"score_gpt":0.4318552241288503,"score_spread":0.33317709221733915,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020460921","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99597555,0.00039197152,0.00042389485,0.0023936604,0.0003061127,0.00044413345,0.000010345777,0.000014927969,0.000039373866],"genre_scores_gemma":[0.99389553,0.00016350506,0.004755451,0.0005465363,0.00037633485,0.0000024999547,0.00002191822,0.00002068719,0.00021755089],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9925564,0.00057280174,0.0052333185,0.0002329134,0.0011761385,0.00022844794],"domain_scores_gemma":[0.9920825,0.00050374656,0.0050515006,0.00041525753,0.0015258422,0.00042115303],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0069191772,0.00014694443,0.0009627742,0.00042420792,0.000063475774,0.000014690108,0.00014340824,0.00026744217,0.000028092714],"category_scores_gemma":[0.013472085,0.00012673708,0.00032065614,0.00047763882,0.00019522777,0.0004064751,0.00002399747,0.0006623095,0.000005856748],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013890036,0.00029974716,0.050934277,0.00045222693,0.00004648235,0.000016542523,0.00018509763,0.00014428538,0.9013311,0.00020658316,0.0001491284,0.044845473],"study_design_scores_gemma":[0.0026335046,0.0024527546,0.64854467,0.00068136543,0.00013067629,0.00005055378,0.00007579198,0.0018119626,0.33930737,0.004006219,0.00018409915,0.00012106878],"about_ca_topic_score_codex":0.00009762111,"about_ca_topic_score_gemma":0.000010106885,"teacher_disagreement_score":0.59761035,"about_ca_system_score_codex":0.000111520465,"about_ca_system_score_gemma":0.00057332567,"threshold_uncertainty_score":0.9948379},"labels":[],"label_agreement":null},{"id":"W2020764743","doi":"10.1172/jci44778","title":"A noninhibitory mutant of the caveolin-1 scaffolding domain enhances eNOS-derived NO synthesis and vasodilation in mice","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Caveolin-1 and cellular processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":130,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital","funders":"National Heart, Lung, and Blood Institute; British Columbia Knowledge Development Fund; Canadian Institutes of Health Research; Raymond and Beverly Sackler Institute for Biological, Physical and Engineering Sciences, Yale University; Yale University; National Institutes of Health; Michael Smith Health Research BC","keywords":"Enos; Mutant; Caveolin 1; Vasodilation; Internal medicine; Scaffold protein; Endocrinology; Medicine; Biology; Chemistry; Cell biology; Nitric oxide; Biochemistry; Nitric oxide synthase; Signal transduction; Gene","score_opus":0.03593085963421172,"score_gpt":0.28586938726464545,"score_spread":0.24993852763043373,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020764743","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984698,0.00046009984,0.00036531905,0.000082991195,0.00024469002,0.000074905096,0.0000018824137,0.0000013560057,0.0002989262],"genre_scores_gemma":[0.9973185,0.000412185,0.0018015254,0.00011254455,0.00032241133,0.0000021647181,0.0000013135199,0.000007859243,0.000021476102],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985633,0.00019602773,0.00086031103,0.00013591965,0.00015281932,0.00009161919],"domain_scores_gemma":[0.99865985,0.0001301103,0.0008228312,0.000105848354,0.00021019316,0.00007116426],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001252977,0.00008622727,0.00022844196,0.0000431176,0.000035686797,0.000008917048,0.0001324228,0.0001564128,0.000008707296],"category_scores_gemma":[0.0013255607,0.000062044506,0.000119389624,0.00008348776,0.00025228082,0.000016493463,0.00004665626,0.00014308268,9.1061116e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014253457,0.00005491822,0.025821796,0.00003774458,0.00002818172,0.0000021103715,0.00030850692,0.000009519191,0.9725649,0.000042185595,0.000021809245,0.00096583297],"study_design_scores_gemma":[0.00039855274,0.0001846293,0.03899531,0.00018617771,0.00003712108,0.000018501578,0.00015946811,0.00005105555,0.9581176,0.0016625957,0.000115734,0.000073229625],"about_ca_topic_score_codex":0.000014883189,"about_ca_topic_score_gemma":0.000029977407,"teacher_disagreement_score":0.014447237,"about_ca_system_score_codex":0.000007413435,"about_ca_system_score_gemma":0.0001884569,"threshold_uncertainty_score":0.25301015},"labels":[],"label_agreement":null},{"id":"W2020831499","doi":"10.1172/jci15420","title":"Rab proteins mediate Golgi transport of caveola-internalized glycosphingolipids and correct lipid trafficking in Niemann-Pick C cells","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":418,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Caprion (Canada)","funders":"National Institute of General Medical Sciences; U.S. Public Health Service; American Heart Association","keywords":"Lactosylceramide; Caveolae; Golgi apparatus; Sphingolipid; Cell biology; Rab; Lipid raft; Ceramide; Vesicular transport protein; Sphingomyelin; Biology; Clathrin; Glycosphingolipid; Lipid microdomain; Endocytosis; Chemistry; Biochemistry; Vesicle; Signal transduction; Receptor; Glycolipid; Cholesterol; GTPase; Membrane; Endoplasmic reticulum","score_opus":0.03484175087733286,"score_gpt":0.2877694204625575,"score_spread":0.2529276695852246,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020831499","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99462163,0.00057607726,0.003830781,0.00020667489,0.0005016611,0.00016688614,0.0000038976173,0.000003775364,0.00008863844],"genre_scores_gemma":[0.9969831,0.0012237488,0.0009801746,0.0001480116,0.00050655607,0.0000021762105,0.000054191623,0.000013507418,0.0000884967],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99779683,0.00014682543,0.0014805868,0.0001942994,0.00023826101,0.00014321801],"domain_scores_gemma":[0.9987399,0.000055642864,0.0007706153,0.00013109049,0.00013923197,0.0001635142],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012465864,0.0001354267,0.00043641098,0.00008510009,0.000021784856,0.000009765596,0.00013709746,0.00024622589,0.000032617],"category_scores_gemma":[0.00022027845,0.000120674216,0.00023051641,0.00010336124,0.00017717636,0.000020341067,0.000010389024,0.00031599528,0.0000011422196],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005614061,0.00021551039,0.1853046,0.0001160279,0.00008190642,0.00002865599,0.0008080642,0.00040231243,0.80732584,0.000023637645,0.00013998811,0.004992048],"study_design_scores_gemma":[0.011895996,0.0037060347,0.18904151,0.0010342553,0.00030498125,0.00012351814,0.00022884902,0.0067386786,0.76554567,0.00048008066,0.020227525,0.00067289814],"about_ca_topic_score_codex":0.000028362061,"about_ca_topic_score_gemma":0.00011414959,"teacher_disagreement_score":0.041780174,"about_ca_system_score_codex":0.000010023715,"about_ca_system_score_gemma":0.00006139184,"threshold_uncertainty_score":0.49209517},"labels":[],"label_agreement":null},{"id":"W2021127134","doi":"10.1172/jci38289","title":"A complement-dependent balance between hepatic ischemia/reperfusion injury and liver regeneration in mice","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Organ Transplantation Techniques and Outcomes","field":"Medicine","cited_by":131,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Center for Research Resources; National Heart, Lung, and Blood Institute; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Liver regeneration; Reperfusion injury; Hepatoprotection; Liver injury; Regeneration (biology); Steatosis; C5a receptor; Context (archaeology); Liver transplantation; Complement system; Ischemia; Endocrinology; Internal medicine; Pharmacology; Biology; Immunology; Transplantation; Medicine; Cell biology; Antibody; Biochemistry","score_opus":0.06360184311612735,"score_gpt":0.3857314280302442,"score_spread":0.3221295849141168,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2021127134","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993712,0.00016020545,0.0011573029,0.0046634073,0.00007738189,0.00016795709,0.0000031792754,0.00001287285,0.000045662335],"genre_scores_gemma":[0.98579824,0.0020249537,0.009889538,0.0018864864,0.00032598892,7.149837e-7,0.000017161223,0.0000056773547,0.00005126555],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99822575,0.00011909173,0.0011841711,0.00011788516,0.00026447972,0.000088602595],"domain_scores_gemma":[0.998934,0.00019859294,0.00051011605,0.00007529766,0.00013031848,0.00015169023],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012144583,0.00008436457,0.0003651367,0.00011236158,0.000027270657,0.0000167248,0.000047537764,0.00011396065,0.000022573218],"category_scores_gemma":[0.0004274383,0.00006803286,0.00006950318,0.00010405769,0.000047318874,0.00019617155,0.000007244233,0.00034034968,0.0000020516818],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017648817,0.00007062226,0.90772426,0.000086801534,0.000013959256,0.000026402062,0.00019407104,0.000001483922,0.076775655,0.000109866734,0.0005915671,0.014228811],"study_design_scores_gemma":[0.0018510314,0.0012371583,0.7801814,0.00042545606,0.0001205742,0.000048244226,0.000022604696,0.0004996601,0.2138505,0.0015630727,0.00011809436,0.00008218374],"about_ca_topic_score_codex":0.000011959014,"about_ca_topic_score_gemma":0.0000072406756,"teacher_disagreement_score":0.13707484,"about_ca_system_score_codex":0.000036241465,"about_ca_system_score_gemma":0.0000894816,"threshold_uncertainty_score":0.27742994},"labels":[],"label_agreement":null},{"id":"W2022497396","doi":"10.1172/jci10536","title":"Neutral endopeptidase inhibits prostate cancer cell migration by blocking focal adhesion kinase signaling","year":2000,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Peptidase Inhibition and Analysis","field":"Medicine","cited_by":155,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"DOD Prostate Cancer Research Program; National Cancer Institute; National Institutes of Health; Hospital for Sick Children; U.S. Department of Defense","keywords":"Focal adhesion; Cell migration; LYN; Cell biology; Tyrosine phosphorylation; DU145; Phosphorylation; Neprilysin; Cell growth; Signal transduction; Chemistry; Biology; Proto-oncogene tyrosine-protein kinase Src; Cell; LNCaP; Cancer cell; Biochemistry","score_opus":0.043823755521184976,"score_gpt":0.3497352575076599,"score_spread":0.3059115019864749,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2022497396","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944339,0.0004060089,0.00006672304,0.0045222105,0.00008381149,0.00017391362,0.000013242287,0.000026514357,0.00027369132],"genre_scores_gemma":[0.99295837,0.0006916673,0.0011856954,0.0030336494,0.0009196703,0.0000058933765,0.000058682675,0.000022191913,0.0011241775],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99695325,0.00027965303,0.0018786633,0.00023933103,0.00042761472,0.00022150562],"domain_scores_gemma":[0.9977765,0.00021088221,0.00091939635,0.00013609807,0.00040681235,0.0005502989],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001216756,0.00018248222,0.00054468977,0.00010578879,0.00010671804,0.000058380087,0.00007295446,0.00019018461,0.0008070757],"category_scores_gemma":[0.00032211468,0.00014675234,0.00043211007,0.00028101992,0.00013822154,0.0005107818,0.0000103187695,0.000599059,0.000032056974],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012264921,0.00091027666,0.048241865,0.00016223392,0.00014599308,0.00015592853,0.00067460904,0.0020895987,0.8758731,0.00002069867,0.02238041,0.048118785],"study_design_scores_gemma":[0.0066053877,0.0016168323,0.0063755685,0.0031462172,0.00059990975,0.00009438827,0.00023746268,0.0087926565,0.96567446,0.0005389227,0.0059697535,0.00034845533],"about_ca_topic_score_codex":0.000119889766,"about_ca_topic_score_gemma":0.000053938027,"teacher_disagreement_score":0.08980134,"about_ca_system_score_codex":0.000093595896,"about_ca_system_score_gemma":0.0003025358,"threshold_uncertainty_score":0.88369125},"labels":[],"label_agreement":null},{"id":"W2024126525","doi":"10.1172/jci23741","title":"Human cardiac potassium channel DNA polymorphism modulates access to drug-binding site and causes drug resistance","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cardiac electrophysiology and arrhythmias","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; School of Medicine, Vanderbilt University; Vanderbilt University; U.S. Public Health Service; National Heart, Lung, and Blood Institute; Heart and Stroke Foundation of Canada","keywords":"Potassium channel; Potassium channel blocker; Circular dichroism; Quinidine; Drug; HEK 293 cells; Biophysics; Helix (gastropod); Chemistry; Wild type; Biology; Molecular biology; Stereochemistry; Biochemistry; Pharmacology; Gene; Mutant","score_opus":0.046319084545337674,"score_gpt":0.36083307761531064,"score_spread":0.31451399306997296,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024126525","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97199017,0.0007542902,0.000013960282,0.026391892,0.0004813986,0.00018393784,0.0000072886664,0.000019825335,0.00015721013],"genre_scores_gemma":[0.99092263,0.00023968155,0.0007298387,0.0028501553,0.0033635006,0.0000039612764,0.000011755934,0.000020633948,0.001857864],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99786437,0.00029888586,0.0010724615,0.0002421063,0.0002885448,0.00023365214],"domain_scores_gemma":[0.998139,0.00035573108,0.00062556047,0.00018747295,0.00023140469,0.00046080578],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014600093,0.00016052088,0.00073391345,0.00018178832,0.00018328162,0.000050666837,0.000094360235,0.00013585722,0.000012427746],"category_scores_gemma":[0.0008313381,0.0001333944,0.0002810337,0.00020102634,0.0002074153,0.00042568537,0.000058393754,0.00069025584,0.000019563578],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023965181,0.00044454468,0.16157505,0.00036808156,0.0014069052,0.0007720766,0.0034741666,0.0014413632,0.5627717,0.0011875076,0.25573257,0.008429565],"study_design_scores_gemma":[0.0030318282,0.00048694227,0.910971,0.0010487724,0.00070290675,0.00022583076,0.00008723688,0.00018213302,0.06932934,0.0037991102,0.009665048,0.00046987203],"about_ca_topic_score_codex":0.000010181521,"about_ca_topic_score_gemma":0.000024277697,"teacher_disagreement_score":0.7493959,"about_ca_system_score_codex":0.000058611244,"about_ca_system_score_gemma":0.00013403734,"threshold_uncertainty_score":0.54396653},"labels":[],"label_agreement":null},{"id":"W2024443346","doi":"10.1172/jci32638","title":"Targeted mutation of mouse skeletal muscle sodium channel produces myotonia and potassium-sensitive weakness","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Ion channel regulation and function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute of Neurological Disorders and Stroke; National Institutes of Health; Muscular Dystrophy Association","keywords":"Myotonia; Skeletal muscle; Internal medicine; Endocrinology; Muscle weakness; Myotonia congenita; Weakness; Periodic paralysis; Extensor digitorum longus muscle; Sodium channel; Ouabain; Biology; Chemistry; Medicine; Anatomy; Paralysis; Sodium; Myotonic dystrophy; Surgery","score_opus":0.04021668770725671,"score_gpt":0.30393776181247306,"score_spread":0.26372107410521634,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024443346","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99672,0.000105678024,0.0017419072,0.00063367444,0.0006363,0.00011153401,0.00000552329,0.0000045550996,0.000040840256],"genre_scores_gemma":[0.997339,0.00018266658,0.0010148801,0.00019280717,0.0009080468,0.0000018520813,0.00005455311,0.000010654247,0.0002955269],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985424,0.00018537474,0.00080651545,0.00016404787,0.00021159243,0.00009004226],"domain_scores_gemma":[0.99825454,0.000050711336,0.00084512756,0.0000950393,0.0006363901,0.00011821255],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007380712,0.00009588122,0.00023279781,0.00007500468,0.00006888342,0.000008370104,0.00005272597,0.00017890582,0.000004047962],"category_scores_gemma":[0.0009994948,0.000082604405,0.00011540488,0.00009315522,0.00028960546,0.000027761555,0.000021928838,0.0001444925,0.0000014876312],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00054046244,0.0002638852,0.010013042,0.00006604205,0.00015698776,0.000015670563,0.0006590252,0.0012184853,0.97869295,0.000099399986,0.003422307,0.0048517287],"study_design_scores_gemma":[0.0018115366,0.0013143818,0.209644,0.000043396605,0.000050601862,0.00014792226,0.00029309557,0.002798265,0.7816028,0.00033231272,0.0017816559,0.00018005635],"about_ca_topic_score_codex":0.000004555308,"about_ca_topic_score_gemma":0.000001950474,"teacher_disagreement_score":0.19963096,"about_ca_system_score_codex":0.0000075011303,"about_ca_system_score_gemma":0.00014216964,"threshold_uncertainty_score":0.336851},"labels":[],"label_agreement":null},{"id":"W2024505986","doi":"10.1172/jci45096","title":"α3(V) Collagen is critical for glucose homeostasis in mice due to effects in pancreatic islets and peripheral tissues","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute of General Medical Sciences; National Institutes of Health","keywords":"Homeostasis; Glucose homeostasis; Peripheral; Pancreatic islets; Chemistry; Internal medicine; Endocrinology; Islet; Cell biology; Biology; Insulin; Medicine; Insulin resistance","score_opus":0.08197850286971431,"score_gpt":0.3801351713258755,"score_spread":0.2981566684561612,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024505986","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99445504,0.0009939132,0.0004326848,0.0032169507,0.00025442085,0.00039348018,0.0000026559414,0.000006964956,0.0002438802],"genre_scores_gemma":[0.96998316,0.00012971963,0.024769103,0.004776886,0.00024477477,0.000018591061,0.000002145185,0.000013011951,0.00006263514],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981969,0.0001993865,0.0010592171,0.00017099896,0.00019448668,0.00017902403],"domain_scores_gemma":[0.997204,0.0019006813,0.00019653185,0.00009370581,0.00020271358,0.00040236578],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.001409087,0.000114131675,0.00069925375,0.0001898868,0.000023304085,0.00001804573,0.000051703075,0.00015146629,0.00006889472],"category_scores_gemma":[0.013063575,0.000093541355,0.0000994194,0.00020155859,0.00013566225,0.00016190625,0.00001590475,0.00017873461,0.0000071473128],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0034440798,0.000827755,0.94002664,0.0009222817,0.00014605292,0.0003187165,0.0049040257,0.000004667122,0.014343813,0.0010337359,0.006359004,0.027669197],"study_design_scores_gemma":[0.006498934,0.003607701,0.93932253,0.0013910338,0.00026746263,0.00009071014,0.00044528182,0.0011210465,0.038017567,0.008216533,0.0008462358,0.00017495464],"about_ca_topic_score_codex":0.000039836337,"about_ca_topic_score_gemma":0.000009493542,"teacher_disagreement_score":0.027494242,"about_ca_system_score_codex":0.00005050296,"about_ca_system_score_gemma":0.00015135408,"threshold_uncertainty_score":0.9952498},"labels":[],"label_agreement":null},{"id":"W2024580708","doi":"10.1172/jci71863","title":"Lipotoxic disruption of NHE1 interaction with PI(4,5)P2 expedites proximal tubule apoptosis","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Chronic Kidney Disease and Diabetes","field":"Medicine","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Division of Chemistry; National Institute of General Medical Sciences; National Institutes of Health; Faculty of Medicine, Chiang Mai University; National Heart, Lung, and Blood Institute; Commission on Higher Education; Chiang Mai University; University of Alberta; University of Louisville; McGill University; National Institute of Diabetes and Digestive and Kidney Diseases; Thailand Research Fund; University of Cincinnati; American Heart Association","keywords":"Lipotoxicity; Sodium–hydrogen antiporter; Reabsorption; Chemistry; Apoptosis; Tubule; Cell biology; Kidney; Internal medicine; Endocrinology; Endocytosis; Pi; Biology; Biochemistry; Receptor; Sodium; Diabetes mellitus; Medicine","score_opus":0.051761564393303185,"score_gpt":0.37047479515482157,"score_spread":0.31871323076151836,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024580708","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964086,0.000072158626,0.0006087278,0.0019422445,0.00042318917,0.00016874136,0.000002007313,0.000015440333,0.00035890256],"genre_scores_gemma":[0.99514323,0.000058785157,0.0024379143,0.0006362651,0.0016388581,0.0000050624235,0.000017318738,0.000015836451,0.000046740388],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977872,0.00017934912,0.0012946127,0.00014902794,0.00045678404,0.00013306979],"domain_scores_gemma":[0.9971285,0.0005572467,0.0012607812,0.00017939287,0.00046278496,0.0004113151],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011755206,0.00012115639,0.0005266439,0.0001403022,0.00003223887,0.000017948849,0.00007276044,0.00012883403,0.000079175144],"category_scores_gemma":[0.0027825548,0.0000837272,0.00023749282,0.00016561779,0.00017210557,0.00041294325,0.00001627394,0.0003622969,0.000010991618],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003571454,0.0015550158,0.85067534,0.00073984166,0.000468234,0.000008039497,0.0005073715,0.00014058285,0.089395724,0.00056557346,0.0074646776,0.044908162],"study_design_scores_gemma":[0.013587931,0.020132804,0.6168743,0.00440953,0.0018625082,0.00013308409,0.0006176662,0.010028554,0.32263955,0.0053012324,0.003973181,0.00043966513],"about_ca_topic_score_codex":0.000006191894,"about_ca_topic_score_gemma":0.0000016253254,"teacher_disagreement_score":0.23380104,"about_ca_system_score_codex":0.000048506354,"about_ca_system_score_gemma":0.0003643548,"threshold_uncertainty_score":0.34142962},"labels":[],"label_agreement":null},{"id":"W2025239337","doi":"10.1172/jci45843","title":"3BP2-deficient mice are osteoporotic with impaired osteoblast and osteoclast functions","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Bone health and treatments","field":"Medicine","cited_by":73,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; University of Toronto; University Health Network; Princess Margaret Cancer Centre","funders":"Canadian Cancer Society Research Institute; University of California, San Diego; Terry Fox Research Institute; University of Toronto","keywords":"Osteoclast; Osteoblast; Bone resorption; Cell biology; Bone remodeling; Osteoporosis; Bone cell; Homeostasis; Chemistry; Internal medicine; Endocrinology; Cancer research; Biology; In vitro; Medicine; Biochemistry","score_opus":0.1162108818171565,"score_gpt":0.3461783920652619,"score_spread":0.2299675102481054,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2025239337","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961847,0.00016029888,0.00010283286,0.002189062,0.00034900676,0.00027498323,0.000003989679,0.000017252885,0.0007178587],"genre_scores_gemma":[0.9945547,0.000041344352,0.0036979637,0.00117519,0.00016217842,0.000004487643,0.000005803428,0.00001620635,0.00034215584],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981141,0.00012917779,0.0010929643,0.00016997979,0.0003157186,0.00017806668],"domain_scores_gemma":[0.99747247,0.00021367377,0.0010520649,0.00014985506,0.00041539155,0.00069657806],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00074899127,0.00013250163,0.0004782882,0.0001186131,0.000090305446,0.000013947499,0.000041379004,0.00013628424,0.00004272954],"category_scores_gemma":[0.00062473584,0.00008668586,0.000110377405,0.0001802498,0.00025346855,0.00018561818,0.000015310046,0.0004323618,0.000029710034],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016303171,0.00044435044,0.9904296,0.00010246221,0.00013758299,0.00014059854,0.0005646942,0.0000029668297,0.00012492786,0.0000453138,0.0007995694,0.0055776252],"study_design_scores_gemma":[0.0049224375,0.00566762,0.9856611,0.0005392276,0.00046132135,0.0009356193,0.00060478685,0.00007605384,0.0003498,0.0002778655,0.000417366,0.00008683915],"about_ca_topic_score_codex":0.00004498792,"about_ca_topic_score_gemma":0.00007611028,"teacher_disagreement_score":0.0054907864,"about_ca_system_score_codex":0.00004207215,"about_ca_system_score_gemma":0.00040852197,"threshold_uncertainty_score":0.35349467},"labels":[],"label_agreement":null},{"id":"W2026165970","doi":"10.1172/jci31810","title":"Genomics and the evolution, pathogenesis, and diagnosis of tuberculosis","year":2007,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":112,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; School of Medicine, Stanford University; National Institutes of Health; School of Medicine, New York University; York University","keywords":"Tuberculosis; Mycobacterium tuberculosis; Genomics; Whole genome sequencing; Biology; Genome; Medicine; Computational biology; Genetics; Gene; Pathology","score_opus":0.18559388424742024,"score_gpt":0.46891330473376674,"score_spread":0.2833194204863465,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2026165970","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.017000595,0.979369,0.00008946461,0.0028268918,0.00019641872,0.0004575096,0.00001169569,0.0000032781322,0.000045166646],"genre_scores_gemma":[0.0008656687,0.99613386,0.0014572815,0.00061011943,0.00086954504,0.000012644003,0.0000118506505,0.00002101055,0.000018041039],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9942124,0.0015585832,0.003473189,0.00021401461,0.00034315692,0.00019864671],"domain_scores_gemma":[0.9876473,0.008889963,0.0022831426,0.00024477587,0.00046526248,0.00046957043],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.012127033,0.00020725376,0.0029898197,0.00026462894,0.0000560718,0.000013005739,0.0001359698,0.00055088615,0.000010534379],"category_scores_gemma":[0.018532243,0.0001093204,0.0007445778,0.00025363057,0.0017208501,0.000076414064,0.00008030454,0.0010081969,0.0000026158843],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023513894,0.00007800726,0.047834218,0.004934771,0.0008178536,0.000016202257,0.000044321332,6.7214705e-7,0.0000020424393,0.0012174915,0.0023002275,0.94251907],"study_design_scores_gemma":[0.003610633,0.0011841026,0.06977391,0.012750432,0.0069083725,0.0012528701,0.00006683242,0.00009986973,0.0000055562177,0.0049692644,0.8991386,0.00023955514],"about_ca_topic_score_codex":0.000044391243,"about_ca_topic_score_gemma":0.0000076809165,"teacher_disagreement_score":0.9422795,"about_ca_system_score_codex":0.00009242013,"about_ca_system_score_gemma":0.00076231913,"threshold_uncertainty_score":0.98973507},"labels":[],"label_agreement":null},{"id":"W2026196869","doi":"10.1172/jci32249","title":"Monosaccharide-induced lipogenesis regulates the human hepatic sex hormone–binding globulin gene","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Diet, Metabolism, and Disease","field":"Medicine","cited_by":226,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; Child and Family Research Institute; University of British Columbia","funders":"Canadian Institutes of Health Research; Michael Smith Health Research BC; Child and Family Research Institute","keywords":"Sex hormone-binding globulin; Lipogenesis; Endocrinology; Internal medicine; Monosaccharide; Biology; Downregulation and upregulation; Hepatocyte nuclear factors; Hepatocyte; Hormone; Chemistry; Transcription factor; Lipid metabolism; Biochemistry; Medicine; Gene; Androgen","score_opus":0.10331899300080868,"score_gpt":0.397070255528934,"score_spread":0.29375126252812533,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2026196869","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955984,0.00093983446,0.00018918201,0.0021307138,0.0006295497,0.00022963643,0.0000021562048,0.000025254467,0.00025532613],"genre_scores_gemma":[0.99305004,0.00023241504,0.0017519714,0.0019038212,0.0027724183,0.0000019252802,0.000009735487,0.000024481918,0.00025319424],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99644107,0.00023819615,0.002173721,0.0002022752,0.00067579374,0.00026895804],"domain_scores_gemma":[0.9965476,0.0006926574,0.0013169061,0.00033035743,0.00040203895,0.000710473],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0057527297,0.0001781391,0.00064111146,0.00016348534,0.00017527588,0.000053844076,0.0002127237,0.00020809135,0.000034556466],"category_scores_gemma":[0.003369503,0.00011525694,0.00045223162,0.0003083983,0.00019249857,0.00023705508,0.00003700912,0.00050935854,0.000029657378],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010176265,0.00080930226,0.4517725,0.00009771339,0.00060227455,0.00037686047,0.0009650098,0.00005020354,0.49378684,0.0006825,0.0060608173,0.04377833],"study_design_scores_gemma":[0.00262831,0.00067072915,0.90148044,0.000147679,0.00085349305,0.00009403449,0.0003288764,0.0003152478,0.08797464,0.004656133,0.0006814095,0.00016898423],"about_ca_topic_score_codex":0.000027277745,"about_ca_topic_score_gemma":0.000006059936,"teacher_disagreement_score":0.44970796,"about_ca_system_score_codex":0.000051221465,"about_ca_system_score_gemma":0.00031725678,"threshold_uncertainty_score":0.47000414},"labels":[],"label_agreement":null},{"id":"W2026858501","doi":"10.1172/jci8858","title":"Targeting the urokinase plasminogen activator receptor enhances gene transfer to human airway epithelia","year":2000,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; Roy J. Carver Charitable Trust; Cystic Fibrosis Foundation; Howard Hughes Medical Institute","keywords":"Urokinase receptor; Urokinase; Receptor; Endocytosis; Cell biology; Plasminogen activator; Biology; Activator (genetics); Plasmin; Genetic enhancement; Molecular biology; Cancer research; Chemistry; Gene; Biochemistry; Endocrinology; Genetics","score_opus":0.051418558140518024,"score_gpt":0.3710018116874486,"score_spread":0.31958325354693057,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2026858501","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965571,0.00025231586,0.00020756085,0.0024994048,0.00019077914,0.00019212688,0.0000102092035,0.000004784236,0.000085694155],"genre_scores_gemma":[0.99451154,0.00042414575,0.0008426591,0.0018267804,0.001835531,0.000009146925,0.00002139295,0.000025012516,0.0005037697],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99769026,0.0005574331,0.0009402219,0.00022651757,0.0003635426,0.0002220153],"domain_scores_gemma":[0.9989883,0.00012267822,0.00014088584,0.00024139379,0.0002167405,0.0002900213],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023949263,0.00013680242,0.0002445254,0.000043588105,0.0001609908,0.00004003827,0.00039591372,0.00016555922,0.0004303247],"category_scores_gemma":[0.0005455464,0.000093575254,0.00021494947,0.00013744613,0.00019644936,0.000015521913,0.000022914419,0.0003643688,0.000057506222],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015132753,0.00006344084,0.001355553,0.0000045304223,0.00007693832,0.0000021149378,0.00010402535,0.00028950884,0.9809125,0.000004375082,0.0038772605,0.011796494],"study_design_scores_gemma":[0.0006620506,0.0036629417,0.0014448115,0.000025018258,0.000019651288,0.0000053875533,0.000031905744,0.000028152923,0.9678473,0.00011602795,0.026037533,0.00011922922],"about_ca_topic_score_codex":0.0000054733073,"about_ca_topic_score_gemma":0.000012373449,"teacher_disagreement_score":0.022160271,"about_ca_system_score_codex":0.000015895846,"about_ca_system_score_gemma":0.00021761609,"threshold_uncertainty_score":0.47117534},"labels":[],"label_agreement":null},{"id":"W2027658726","doi":"10.1172/jci67201","title":"Whole exome sequencing of adenoid cystic carcinoma","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Salivary Gland Tumors Diagnosis and Treatment","field":"Medicine","cited_by":273,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Dental and Craniofacial Research; National Research Council Canada; University of Texas MD Anderson Cancer Center; National Cancer Institute; National Institutes of Health; Fonds Wetenschappelijk Onderzoek; Wellcome Trust; Vlaamse regering; Adenoid Cystic Carcinoma Research Foundation","keywords":"Exome sequencing; Biology; CDKN2A; Cancer research; Genetics; Cancer; Adenoid cystic carcinoma; Mutation; PTPN11; Gene; KRAS; Carcinoma","score_opus":0.10571638864368364,"score_gpt":0.36449659580667476,"score_spread":0.2587802071629911,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027658726","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99612534,0.00037351696,0.000046373476,0.0026130246,0.00030412688,0.00016411269,0.0000017968039,0.000006142161,0.00036553838],"genre_scores_gemma":[0.9954898,0.00004599188,0.0031987901,0.00061733904,0.00050859543,0.0000043807077,0.0000067463616,0.00001015631,0.00011820548],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979623,0.00012365766,0.0013809964,0.000100963836,0.00032269763,0.000109368644],"domain_scores_gemma":[0.99769765,0.00054807076,0.00088375976,0.00014911128,0.00042241774,0.0002989846],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007306891,0.00009091584,0.0005256426,0.00009772897,0.000022149268,0.00001267754,0.00006418625,0.00008954851,0.00012682653],"category_scores_gemma":[0.001424751,0.000060914725,0.00023372918,0.00012108236,0.00011951879,0.00018752115,0.000013842769,0.00024863213,0.000050492134],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005003331,0.00017446317,0.9933071,0.00005748459,0.00008626449,0.000078476565,0.00012016291,0.000019581657,0.0028889363,0.00014494677,0.0019389641,0.0011335515],"study_design_scores_gemma":[0.0019353929,0.0014928675,0.98543054,0.0003316693,0.00023592499,0.00020882877,0.00010071205,0.00035405956,0.0064172945,0.0033254202,0.00011307656,0.000054208012],"about_ca_topic_score_codex":0.00006847106,"about_ca_topic_score_gemma":0.0000013631319,"teacher_disagreement_score":0.007876589,"about_ca_system_score_codex":0.00005495837,"about_ca_system_score_gemma":0.00030476123,"threshold_uncertainty_score":0.24840304},"labels":[],"label_agreement":null},{"id":"W2027756860","doi":"10.1172/jci30562","title":"The role of CXC chemokines in pulmonary fibrosis","year":2007,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Interstitial Lung Diseases and Idiopathic Pulmonary Fibrosis","field":"Medicine","cited_by":272,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pediatric Oncology Group","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Cancer Institute; National Heart, Lung, and Blood Institute; National Institutes of Health","keywords":"Fibrocyte; CXC chemokine receptors; Angiogenesis; Chemokine; CXCR3; Progenitor cell; Pulmonary fibrosis; Mesenchymal stem cell; Immunology; Fibrosis; Medicine; Cancer research; Biology; Pathology; Cell biology; Inflammation; Chemokine receptor; Stem cell","score_opus":0.0929449321263822,"score_gpt":0.42575160221394065,"score_spread":0.33280667008755843,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027756860","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0016301967,0.9960894,0.000003956447,0.00023065938,0.00069429266,0.00033302352,0.0000137809775,0.000005233149,0.000999438],"genre_scores_gemma":[0.0035360975,0.99405646,0.00027811504,0.00009540693,0.0018203687,0.0000053263407,0.000027984073,0.00003167873,0.00014857482],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9945455,0.00033983402,0.004163058,0.0001901676,0.0005527648,0.00020866073],"domain_scores_gemma":[0.99447054,0.0015584935,0.0030151887,0.00029360084,0.00036863418,0.00029356926],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003264347,0.00024502145,0.0021352943,0.00024907195,0.00004405451,0.000018785033,0.0002824866,0.0005111613,0.00001752422],"category_scores_gemma":[0.0021219212,0.00014247472,0.0015832267,0.00040879144,0.00038399026,0.00012684852,0.000055034878,0.0010791238,0.000007420498],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008461198,0.00018844586,0.0013250738,0.004043367,0.00014656738,0.00007585726,0.000013921179,5.91628e-7,0.000017416087,0.00019681391,0.0003393794,0.99280643],"study_design_scores_gemma":[0.0003572068,0.0016343324,0.0017918664,0.041633423,0.001354356,0.00030454076,0.0000508874,0.000048013622,0.00003542119,0.0018098716,0.9508301,0.0001499893],"about_ca_topic_score_codex":0.000016072554,"about_ca_topic_score_gemma":0.0000022255329,"teacher_disagreement_score":0.99265647,"about_ca_system_score_codex":0.00009274036,"about_ca_system_score_gemma":0.0010261066,"threshold_uncertainty_score":0.580995},"labels":[],"label_agreement":null},{"id":"W2028650359","doi":"10.1172/jci42391","title":"Prkar1a is an osteosarcoma tumor suppressor that defines a molecular subclass in mice","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":101,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; Ontario Institute for Cancer Research","funders":"National Cancer Institute; Canadian Institutes of Health Research; National Institutes of Health; University of Toronto","keywords":"Subclass; Biology; Carcinogenesis; Osteosarcoma; Suppressor; Cancer research; Gene; Cancer; Genetics; Antibody","score_opus":0.09319645429884904,"score_gpt":0.38414028404543443,"score_spread":0.2909438297465854,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2028650359","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9879825,0.000222871,0.000006701195,0.010831854,0.00046739244,0.0002196622,0.0000038448356,0.000010779027,0.0002543828],"genre_scores_gemma":[0.9887735,0.00003640742,0.006428242,0.0043492625,0.00035304637,0.000009174472,0.000009528801,0.000020129175,0.000020710326],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978316,0.00018966118,0.0011633913,0.00020400796,0.00043305728,0.00017827784],"domain_scores_gemma":[0.9979234,0.0004940277,0.0006840419,0.00024267987,0.00023213236,0.000423759],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011764803,0.0001473428,0.00055972306,0.00015828037,0.000026742213,0.00003685727,0.0001337154,0.00016308381,0.00008169463],"category_scores_gemma":[0.001467604,0.00010836112,0.0002650758,0.0001584962,0.00015744987,0.00023744667,0.000023520086,0.0006983478,0.000015478365],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002401338,0.00090310484,0.951763,0.000026186011,0.00006441575,0.0006412374,0.00015289923,0.0000022805368,0.041344963,0.00041648466,0.00051193545,0.003933369],"study_design_scores_gemma":[0.003911058,0.0009210082,0.8845355,0.00019173055,0.0001964991,0.00047036936,0.00006087279,0.00024797578,0.10489706,0.0029801738,0.0014800801,0.000107712614],"about_ca_topic_score_codex":0.000041937714,"about_ca_topic_score_gemma":0.00008687869,"teacher_disagreement_score":0.06722753,"about_ca_system_score_codex":0.000025642146,"about_ca_system_score_gemma":0.00026289557,"threshold_uncertainty_score":0.44188383},"labels":[],"label_agreement":null},{"id":"W2028683699","doi":"10.1172/jci32482","title":"Sizing up sialic acid in glomerular disease","year":2007,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Renal Diseases and Glomerulopathies","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"Canadian Institutes of Health Research; National Cancer Institute; Kidney Foundation of Canada","keywords":"Sialic acid; Glomerulus; Proteinuria; Lesion; Disease; Glomerulonephritis; Medicine; Chemistry; Biochemistry; Immunology; Biology; Internal medicine; Pathology; Kidney","score_opus":0.09702591322263254,"score_gpt":0.4009249863074031,"score_spread":0.30389907308477054,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2028683699","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33808705,0.008946763,0.00014617514,0.6489864,0.003105915,0.00039853432,0.00002261161,0.000024967223,0.0002815937],"genre_scores_gemma":[0.09174436,0.0025630652,0.0011238217,0.8798764,0.0234603,0.000005384791,0.0002104887,0.00008426352,0.0009319571],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9945061,0.00041000894,0.003221282,0.00031749092,0.0011844819,0.00036060277],"domain_scores_gemma":[0.995745,0.0006272566,0.0020147068,0.0003490644,0.00048693683,0.0007770067],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0024566606,0.0003118728,0.0013193651,0.0005958325,0.00003863923,0.000053008178,0.00019381479,0.0008530302,0.000080000056],"category_scores_gemma":[0.006403198,0.00024422046,0.0009887172,0.0004091977,0.00034688442,0.00025000333,0.000040116334,0.0037835645,0.000042561926],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014519634,0.00022226165,0.24133433,0.00176019,0.00029990062,0.0136266025,0.00011090144,0.000023856344,0.00022595772,0.000041379557,0.73119,0.009712658],"study_design_scores_gemma":[0.0037161803,0.0008042142,0.4826219,0.0060803355,0.0011156985,0.00018004759,0.00004234945,0.00013033857,0.00016109613,0.005172469,0.49953967,0.0004356724],"about_ca_topic_score_codex":0.000012489343,"about_ca_topic_score_gemma":0.0000021222388,"teacher_disagreement_score":0.24634269,"about_ca_system_score_codex":0.00012092708,"about_ca_system_score_gemma":0.0011118972,"threshold_uncertainty_score":0.9985148},"labels":[],"label_agreement":null},{"id":"W2029190746","doi":"10.1172/jci14817","title":"Parathyroid hormone is essential for normal fetal bone formation","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Bone health and treatments","field":"Medicine","cited_by":232,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Jewish General Hospital; McGill University","funders":"Medical Research Council","keywords":"Internal medicine; Endocrinology; Parathyroid hormone; Fetus; Anabolism; Cartilage; Ossification; Teriparatide; Long bone; Chemistry; Medicine; Biology; Anatomy; Calcium; Pregnancy","score_opus":0.11568784558306382,"score_gpt":0.39960700421157735,"score_spread":0.2839191586285135,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2029190746","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9850874,0.0010211696,0.002215415,0.010611242,0.00035787694,0.00034352098,0.000007998112,0.000012889556,0.0003424775],"genre_scores_gemma":[0.9857551,0.0005659385,0.009213196,0.002942965,0.0008594584,0.000007550174,0.000024433186,0.000012404986,0.0006189434],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9977168,0.00006504746,0.0015959288,0.00010451148,0.00033760193,0.00018012556],"domain_scores_gemma":[0.99789673,0.00019894695,0.0009984208,0.00011106808,0.00035350263,0.00044133925],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008094456,0.000101672216,0.00043767292,0.00009357422,0.00008168234,0.000018892142,0.000041416995,0.00016644828,0.0000542731],"category_scores_gemma":[0.0007076282,0.0000788246,0.00029486624,0.0001097236,0.00008449821,0.0004574382,0.000007968834,0.00029252796,0.000056213226],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00866339,0.0043963436,0.069755666,0.000638465,0.00096366066,0.0003902013,0.0027098986,0.000042876873,0.02090184,0.00093875657,0.64082235,0.24977654],"study_design_scores_gemma":[0.07771011,0.025618317,0.69877565,0.00061952206,0.0026349567,0.0038889744,0.00021160014,0.075994655,0.023815785,0.0104495175,0.07957694,0.00070397666],"about_ca_topic_score_codex":0.00000588777,"about_ca_topic_score_gemma":0.0000026108366,"teacher_disagreement_score":0.62902,"about_ca_system_score_codex":0.000040000516,"about_ca_system_score_gemma":0.00010498521,"threshold_uncertainty_score":0.32143742},"labels":[],"label_agreement":null},{"id":"W2029669172","doi":"10.1172/jci14205","title":"Linking a serotonin transporter polymorphism to vascular smoothmuscle proliferation in patients with primary pulmonary hypertension","year":2001,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Pulmonary Hypertension Research and Treatments","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; SickKids Foundation; University of Toronto","funders":"","keywords":"BMPR2; Pulmonary hypertension; Bone morphogenetic protein receptor; Serotonin transporter; Bone morphogenetic protein; Pathophysiology; Medicine; Disease; Genetic disorder; Bioinformatics; Receptor; Heart disease; Endocrinology; Internal medicine; Serotonin; Biology; Genetics; Gene","score_opus":0.09914885493717085,"score_gpt":0.3619134816496382,"score_spread":0.26276462671246736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2029669172","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.34532142,0.6490647,0.00006758435,0.0009174878,0.0003746792,0.004087781,0.000016946218,0.000028745942,0.00012066486],"genre_scores_gemma":[0.006456843,0.9865725,0.0035514373,0.0017694269,0.0006824004,0.000070921094,0.0006584057,0.00010528224,0.00013278934],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99452305,0.00052156375,0.0028188028,0.0004699284,0.001307141,0.0003594997],"domain_scores_gemma":[0.9966529,0.0002776479,0.0011806125,0.0003887267,0.0006769314,0.0008231789],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0015165089,0.00042005573,0.0028144335,0.0007306005,0.00006333847,0.000032533113,0.00017807753,0.00054623844,0.000024650206],"category_scores_gemma":[0.0004056615,0.0002617452,0.000721548,0.0007990758,0.00010325265,0.00034257953,0.000034329296,0.0013542883,0.000027816497],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010297715,0.0019638028,0.20773512,0.0025724636,0.00040481729,0.0037800672,0.00001656582,0.000006856689,0.0000040357772,0.0000017230981,0.00013774834,0.782347],"study_design_scores_gemma":[0.006345427,0.0043390933,0.7333916,0.05665713,0.0022013667,0.00084241,0.000005203683,0.00006347416,0.0000025773957,0.000075001604,0.19563587,0.0004408846],"about_ca_topic_score_codex":0.000011112305,"about_ca_topic_score_gemma":0.0000033536128,"teacher_disagreement_score":0.7819061,"about_ca_system_score_codex":0.00023558072,"about_ca_system_score_gemma":0.001349575,"threshold_uncertainty_score":0.9999835},"labels":[],"label_agreement":null},{"id":"W2029883816","doi":"10.1172/jci8829","title":"Continuous low-dose therapy with vinblastine and VEGF receptor-2 antibody induces sustained tumor regression without overt toxicity","year":2000,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Neuroblastoma Research and Treatments","field":"Medicine","cited_by":1175,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Health Science Centre; Health Sciences Centre; University of Toronto; Hospital for Sick Children","funders":"National Institutes of Health; National Cancer Institute; Cancer Care Ontario","keywords":"Medicine; Vinblastine; Pharmacology; Angiogenesis; Chemotherapy; In vivo; Cancer research; Toxicity; Combination therapy; Oncology; Internal medicine; Biology","score_opus":0.04590777157183174,"score_gpt":0.3935550668225939,"score_spread":0.34764729525076216,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2029883816","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966091,0.00013117498,0.0000098519795,0.0025908805,0.00008748462,0.00033235672,0.0000026816301,0.00002061764,0.00021583332],"genre_scores_gemma":[0.9959594,0.00072987255,0.0012948228,0.0008931853,0.0004242113,0.0000028692755,0.000010873889,0.000023475146,0.00066129694],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99772114,0.00030349352,0.0008976486,0.00023305246,0.0006127362,0.00023193],"domain_scores_gemma":[0.9978765,0.00035571802,0.0005933634,0.00017086661,0.00040217256,0.00060133735],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008316517,0.0001858943,0.0006440822,0.000115745104,0.00008679939,0.000047710953,0.000082913626,0.00010329298,0.00017278193],"category_scores_gemma":[0.00094810623,0.00009614868,0.00010972,0.00020782756,0.00036482848,0.00031635867,0.000016455184,0.0006073856,0.00001195369],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.028286705,0.0018750633,0.696634,0.00011560831,0.0004281654,0.0010536158,0.00024630016,0.0000066419875,0.18002462,0.000019747018,0.0017718379,0.08953769],"study_design_scores_gemma":[0.02207682,0.019201782,0.8614631,0.0019513133,0.0001220545,0.00078411354,0.000113305956,0.00025174662,0.091659665,0.00039372843,0.0017602955,0.00022204478],"about_ca_topic_score_codex":0.0000107364285,"about_ca_topic_score_gemma":0.000002447406,"teacher_disagreement_score":0.16482912,"about_ca_system_score_codex":0.000035723977,"about_ca_system_score_gemma":0.00040738293,"threshold_uncertainty_score":0.39208296},"labels":[],"label_agreement":null},{"id":"W2030780996","doi":"10.1172/jci60005","title":"Viruses and human brain tumors: cytomegalovirus enters the fray","year":2011,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University Health Network","funders":"Canadian Institutes of Health Research; Hospital for Sick Children; National Brain Tumor Society","keywords":"Medulloblastoma; Cytomegalovirus; Human cytomegalovirus; Medicine; Oncology; Virus; Immunology; Internal medicine; Virology; Cancer research; Biology; Herpesviridae; Viral disease","score_opus":0.16509286066408507,"score_gpt":0.4180852797420965,"score_spread":0.25299241907801145,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2030780996","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.39952657,0.00071353273,0.00003228454,0.5967492,0.000673202,0.000546625,0.000023115183,0.000027146121,0.0017083838],"genre_scores_gemma":[0.0725399,0.00039511514,0.00047404712,0.90824187,0.015653154,0.000011488077,0.000037402,0.000104777384,0.0025422717],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99451596,0.0008199978,0.0027000702,0.00037818326,0.0011726458,0.00041316322],"domain_scores_gemma":[0.994432,0.0019653398,0.0020463723,0.0005283084,0.00056927785,0.00045872698],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0044985344,0.00036153907,0.0013609021,0.00042631364,0.00020150119,0.0001549829,0.0004521045,0.001012022,0.00036131218],"category_scores_gemma":[0.0030426953,0.00021966666,0.0006635989,0.00024894814,0.0013481833,0.00027768858,0.00012970784,0.0068446244,0.00008028228],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027042523,0.00008043048,0.031216057,0.0002046622,0.00039373463,0.0007465512,0.0002527435,2.2901729e-7,0.0008896342,0.00011439341,0.9634475,0.0023836375],"study_design_scores_gemma":[0.0019160601,0.0015988327,0.06139583,0.0009704688,0.00036421695,0.00045623857,0.000041645217,0.000011492069,0.00043546426,0.003211286,0.9293563,0.00024220026],"about_ca_topic_score_codex":0.0002356187,"about_ca_topic_score_gemma":0.000029655488,"teacher_disagreement_score":0.32698664,"about_ca_system_score_codex":0.00008721499,"about_ca_system_score_gemma":0.00073530985,"threshold_uncertainty_score":0.9954466},"labels":[],"label_agreement":null},{"id":"W2030802073","doi":"10.1172/jci34753","title":"Therapeutic suppression of translation initiation modulates chemosensitivity in a mouse lymphoma model","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"PI3K/AKT/mTOR signaling in cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":334,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of General Medical Sciences; National Cancer Institute; Canadian Institutes of Health Research; National Institutes of Health","keywords":"EIF4E; Initiation factor; Eukaryotic initiation factor; Eukaryotic translation; Translation (biology); EIF4A1; Biology; eIF4A; Cancer research; Tensin; eIF2; Internal ribosome entry site; Eukaryotic translation initiation factor 4 gamma; Ribosome; PTEN; Cell biology; Messenger RNA; RNA; Genetics; PI3K/AKT/mTOR pathway; Gene; Signal transduction","score_opus":0.11562283011825328,"score_gpt":0.36330825035942327,"score_spread":0.24768542024117,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2030802073","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9917788,0.00028120785,0.0074361805,0.00022079823,0.00013897219,0.00008712479,0.0000055369355,0.0000034258717,0.000047982776],"genre_scores_gemma":[0.9950941,0.00031165115,0.004075564,0.0002496947,0.00021185628,0.0000017240844,0.000022279555,0.000013531663,0.000019568164],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982174,0.0002391595,0.0010437029,0.00014932579,0.00024966273,0.00010076884],"domain_scores_gemma":[0.9986229,0.00011771557,0.00077313586,0.00014300102,0.00026713053,0.000076105905],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010207832,0.000099024684,0.0002809099,0.00007571848,0.000027668799,0.0000051540214,0.00009793859,0.00024561008,0.0000027263102],"category_scores_gemma":[0.0004692199,0.00008951701,0.00015433173,0.00010077028,0.00015998105,0.000030717223,0.000013957206,0.00014198438,5.1818625e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038432176,0.00014496628,0.031723347,0.00001814598,0.00003092133,0.0000030174879,0.00019736879,0.022262821,0.939306,0.000015752292,0.00009339521,0.0058198976],"study_design_scores_gemma":[0.0019223712,0.0003859195,0.051404692,0.000077932666,0.000023583347,0.000025331392,0.000012714781,0.06878348,0.8753756,0.0018288487,0.00004856467,0.00011095604],"about_ca_topic_score_codex":0.0000070497535,"about_ca_topic_score_gemma":0.000006886799,"teacher_disagreement_score":0.06393044,"about_ca_system_score_codex":0.000022372848,"about_ca_system_score_gemma":0.00031002634,"threshold_uncertainty_score":0.36503977},"labels":[],"label_agreement":null},{"id":"W2031472162","doi":"10.1172/jci37914","title":"Adult neural stem cells expressing IL-10 confer potent immunomodulation and remyelination in experimental autoimmune encephalitis","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Neurogenesis and neuroplasticity mechanisms","field":"Neuroscience","cited_by":197,"is_retracted":true,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institutes of Health; Multiple Sclerosis Society; Mary E. Groff Surgical and Medical Research and Education Charitable Trust; National Multiple Sclerosis Society","keywords":"Remyelination; Neural stem cell; Biology; Secretion; Cell biology; Stem cell; Myelin; Immunology; Multiple sclerosis; Neuroscience; Biochemistry; Central nervous system","score_opus":0.09647139142671014,"score_gpt":0.34802595748191106,"score_spread":0.25155456605520093,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031472162","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978507,0.00007141426,0.0004519366,0.00067600486,0.0007362949,0.000150126,0.0000021915218,0.000017558737,0.000043747164],"genre_scores_gemma":[0.9978346,0.00010155951,0.0006159572,0.0012293011,0.00016087228,0.0000015032911,8.7751994e-7,0.000012142691,0.00004315507],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99682975,0.0006990675,0.0015415932,0.00029010253,0.00046291246,0.0001765786],"domain_scores_gemma":[0.99808997,0.0004952604,0.000983317,0.00012679787,0.00015792303,0.00014673515],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00077722437,0.00015184564,0.0003523393,0.00015614112,0.00009796406,0.0001156224,0.00014872238,0.0001111736,0.000014862001],"category_scores_gemma":[0.0007500542,0.00013645076,0.00010965674,0.0001732981,0.00012388223,0.0007280632,0.000031224055,0.00034397675,0.0000047560447],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014465759,0.00013161638,0.00026341205,0.0000047115213,0.0000014879091,0.000045128952,0.0001585355,0.00041162298,0.98592985,0.001200686,0.000020174717,0.011688093],"study_design_scores_gemma":[0.001213607,0.00091895176,0.033752277,0.00010762083,0.000011614259,0.000083691906,0.00005627773,0.02324167,0.9396399,0.0008061416,0.000048007063,0.00012020781],"about_ca_topic_score_codex":0.0000035406708,"about_ca_topic_score_gemma":4.167535e-7,"teacher_disagreement_score":0.04628994,"about_ca_system_score_codex":0.00003552477,"about_ca_system_score_gemma":0.00006270236,"threshold_uncertainty_score":0.55643004},"labels":[],"label_agreement":null},{"id":"W2031674672","doi":"10.1172/jci65833","title":"Prognostically relevant gene signatures of high-grade serous ovarian carcinoma","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Ovarian cancer diagnosis and treatment","field":"Medicine","cited_by":591,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; University of Calgary","funders":"National Human Genome Research Institute; National Institute of General Medical Sciences; Duke-NUS Medical School; Medical Research Council; National Health and Medical Research Council; National Cancer Institute; Foundation Medicine; National Institutes of Health","keywords":"Oncology; Ovarian cancer; Internal medicine; Medicine; Serous carcinoma; Serous fluid; Context (archaeology); Ovarian carcinoma; Disease; Prognostic variable; Cancer; Bioinformatics; Biology","score_opus":0.0778061322023824,"score_gpt":0.36296631908472043,"score_spread":0.285160186882338,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031674672","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98851484,0.0012929348,0.00026896704,0.00862043,0.0009238082,0.0002442313,0.0000068306517,0.000009091241,0.000118848795],"genre_scores_gemma":[0.9672782,0.00021210393,0.029646099,0.0009717908,0.0018252442,0.0000048659444,0.000011725577,0.000017921453,0.00003207094],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974035,0.0001937342,0.001569121,0.00013312302,0.00049386994,0.00020662342],"domain_scores_gemma":[0.9970459,0.00073833944,0.0010572039,0.00020341504,0.0004054565,0.0005497021],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013920343,0.00013358184,0.0006703021,0.00009724341,0.000029476461,0.000011304111,0.000085177206,0.00021095196,0.00005904299],"category_scores_gemma":[0.0020365377,0.00009225575,0.00027371492,0.00016088822,0.00017502416,0.00018059129,0.000021710317,0.0004460083,0.000008636217],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042942754,0.0014518346,0.97726846,0.00009481628,0.0003858607,0.000087380766,0.00019681307,0.000030544474,0.0034834463,0.0041765156,0.0026211326,0.009773767],"study_design_scores_gemma":[0.0032148447,0.0018657591,0.9678418,0.00026285974,0.0007039351,0.00013175132,0.00001929626,0.000057252015,0.022622833,0.002336429,0.00086034794,0.00008287684],"about_ca_topic_score_codex":0.00003766349,"about_ca_topic_score_gemma":0.0000025125005,"teacher_disagreement_score":0.02937713,"about_ca_system_score_codex":0.00006341952,"about_ca_system_score_gemma":0.00040153597,"threshold_uncertainty_score":0.37620804},"labels":[],"label_agreement":null},{"id":"W2032138405","doi":"10.1172/jci62185","title":"MicroRNA-26 governs profibrillatory inward-rectifier potassium current changes in atrial fibrillation","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Anodic Oxide Films and Nanostructures","field":"Materials Science","cited_by":266,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Bell (Canada); McGill University; Montreal Heart Institute","funders":"Canadian Institutes of Health Research; Institut de Cardiologie de Montréal; Fondation Leducq; National Natural Science Foundation of China; Heart and Stroke Foundation of Canada","keywords":"Gene knockdown; Downregulation and upregulation; Transcription factor; Inward-rectifier potassium ion channel; Internal medicine; NFAT; Regulator; Chemistry; Potassium channel; Endocrinology; Biology; Cell biology; Medicine; Ion channel; Gene; Receptor; Biochemistry","score_opus":0.05594834884251098,"score_gpt":0.34099590711064703,"score_spread":0.28504755826813605,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2032138405","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9916526,0.00075392396,0.00004861441,0.002660359,0.0045352774,0.00025893035,0.0000072362373,0.000022118147,0.000060910716],"genre_scores_gemma":[0.99323404,0.00025673842,0.0017184025,0.00020954483,0.004491343,0.0000016285273,0.000003911392,0.000020364369,0.00006401921],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997156,0.00038623312,0.0015222311,0.00022339889,0.0004865809,0.00022555816],"domain_scores_gemma":[0.99737364,0.00039471957,0.0015265406,0.0001594314,0.0003165001,0.00022914675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018158532,0.00015335654,0.0004884874,0.00013757889,0.000056649562,0.00010419384,0.00017794852,0.00021874136,0.00039179705],"category_scores_gemma":[0.0018310286,0.00011611068,0.00022527171,0.00018651418,0.00019482835,0.0005790466,0.000054493725,0.00036086573,0.00012740756],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031369246,0.000033367713,0.48752227,0.00009474014,0.000036396228,0.000007687254,0.00047802555,0.00069519907,0.41858342,0.00034557944,0.02483223,0.067057386],"study_design_scores_gemma":[0.0022829124,0.0006345509,0.85616696,0.000400646,0.00007095337,0.000050356037,0.000100238845,0.00075503037,0.09368347,0.013046038,0.032435745,0.00037310336],"about_ca_topic_score_codex":0.00008117866,"about_ca_topic_score_gemma":0.000049743325,"teacher_disagreement_score":0.36864468,"about_ca_system_score_codex":0.00007529695,"about_ca_system_score_gemma":0.00029678663,"threshold_uncertainty_score":0.4734856},"labels":[],"label_agreement":null},{"id":"W2032760353","doi":"10.1172/jci23683","title":"Differential impact of prostaglandin H synthase 1 knockdown on platelets and parturition","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Inflammatory mediators and NSAID effects","field":"Medicine","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"National Institutes of Health; National Institute of General Medical Sciences; Queen's University; University of Pennsylvania","keywords":"Luteolysis; Platelet; Endocrinology; Internal medicine; Thromboxane A2; Aspirin; Thromboxane-A synthase; Thromboxane; Preeclampsia; Prostaglandin; Platelet activation; Medicine; Receptor; Biology; Pregnancy; Corpus luteum; Ovary","score_opus":0.050830465635370456,"score_gpt":0.38516132413207393,"score_spread":0.33433085849670346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2032760353","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99869174,0.00006055339,0.00003897593,0.00071525,0.00025044548,0.0001699423,0.000005079531,0.0000063017433,0.000061703235],"genre_scores_gemma":[0.9977913,0.000097388176,0.00048766675,0.00016592715,0.0014157336,0.0000013715147,0.0000071565223,0.000009240881,0.000024202933],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983304,0.00014718134,0.0010181663,0.000097341006,0.00029817133,0.000108736094],"domain_scores_gemma":[0.99815065,0.0005273943,0.00073694374,0.0000936721,0.0001612257,0.0003301198],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00083352334,0.000103564686,0.00047974303,0.00011738302,0.000026114343,0.000010348763,0.0000324945,0.00015403952,0.00009024787],"category_scores_gemma":[0.0017857342,0.00006719087,0.00023051801,0.00006081461,0.00013869622,0.00013745378,0.000008324326,0.0003684085,0.000006000751],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008140648,0.0012034237,0.8263463,0.0003941183,0.00048125448,0.0001720021,0.0006005401,0.00014674263,0.07949433,0.00027409586,0.009050858,0.07369568],"study_design_scores_gemma":[0.0057610124,0.005798611,0.9375092,0.0008411912,0.0002008654,0.00017355505,0.00001010852,0.002127351,0.046662472,0.0005122702,0.00029773696,0.000105646344],"about_ca_topic_score_codex":0.0000033001136,"about_ca_topic_score_gemma":0.0000014079435,"teacher_disagreement_score":0.11116287,"about_ca_system_score_codex":0.0000385195,"about_ca_system_score_gemma":0.00017003962,"threshold_uncertainty_score":0.2739964},"labels":[],"label_agreement":null},{"id":"W2034223507","doi":"10.1172/jci39715","title":"PDZD7 is a modifier of retinal disease and a contributor to digenic Usher syndrome","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Hearing, Cochlea, Tinnitus, Genetics","field":"Neuroscience","cited_by":245,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill Genome Centre; McGill University Health Centre","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute on Deafness and Other Communication Disorders; National Institutes of Health; Deutsche Forschungsgemeinschaft; American Heart Association","keywords":"Usher syndrome; Retinitis pigmentosa; Biology; Genetics; Missense mutation; Zebrafish; Retinal degeneration; Compound heterozygosity; Mutation; Phenotype; Genetic heterogeneity; Gene","score_opus":0.10326346366200459,"score_gpt":0.38689034224426394,"score_spread":0.2836268785822593,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034223507","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946394,0.00002660065,0.00036608678,0.00407697,0.0006145011,0.00019491251,0.000015867,0.000009115166,0.000056538964],"genre_scores_gemma":[0.9937964,0.000034870074,0.0027842708,0.002871009,0.00029474014,0.000002155031,4.3791005e-7,0.000016290584,0.00019983918],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99724585,0.00028754288,0.0014262897,0.0002578677,0.00057070574,0.00021176899],"domain_scores_gemma":[0.9966692,0.00094179396,0.0008513073,0.00027893743,0.00032533804,0.000933471],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0019046946,0.00012433068,0.00041033057,0.000120776596,0.000061685445,0.000058848116,0.0002547723,0.0001441863,0.00007347918],"category_scores_gemma":[0.023782779,0.00010649814,0.00015692285,0.00023567841,0.00040750124,0.00020217877,0.00009004027,0.00068252237,0.00002511613],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006240234,0.00028181906,0.27499935,0.000079134574,0.000033662265,0.00015150216,0.00063468015,0.000065828666,0.71668833,0.0013884648,0.002010138,0.003043046],"study_design_scores_gemma":[0.0013966409,0.0009664035,0.9151728,0.00017631946,0.000118286815,0.00018508887,0.000016377526,0.0014534061,0.06708381,0.009741442,0.0034736225,0.00021579365],"about_ca_topic_score_codex":0.0000070842048,"about_ca_topic_score_gemma":0.000003617355,"teacher_disagreement_score":0.6496045,"about_ca_system_score_codex":0.000014250588,"about_ca_system_score_gemma":0.00038579092,"threshold_uncertainty_score":0.9844403},"labels":[],"label_agreement":null},{"id":"W2034769761","doi":"10.1172/jci14498","title":"The clinical relevance of glycobiology","year":2001,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; SickKids Foundation","funders":"","keywords":"Glycobiology; Relevance (law); Computational biology; Medicine; Computer science; Biology; Glycan; Political science; Biochemistry","score_opus":0.10344461987563468,"score_gpt":0.42655168550904565,"score_spread":0.32310706563341096,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034769761","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3050097,0.0034946946,0.0010712176,0.6827006,0.0055081956,0.0006129475,0.000030344449,0.000008655411,0.0015636592],"genre_scores_gemma":[0.11404847,0.060672347,0.0083460035,0.6829482,0.10679094,0.00003514062,0.00077780674,0.000229187,0.026151916],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99401796,0.0016055974,0.0032860641,0.00029759412,0.0005224445,0.00027032534],"domain_scores_gemma":[0.99349296,0.0015267275,0.0031118526,0.0005433091,0.001173185,0.00015199177],"candidate_categories":["metaresearch","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.0056784935,0.00019017786,0.00067918585,0.00007384862,0.000084230676,0.000029460209,0.00068533455,0.0016215161,0.000028095354],"category_scores_gemma":[0.01550205,0.00012331468,0.00071364886,0.00014419446,0.0011138181,0.0000076026545,0.00011556661,0.002672671,0.000018117727],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035318173,0.000040968454,0.0077811745,0.00003157582,0.00019764804,0.00003933251,0.0000038645653,0.000010775562,0.0014809744,0.00003262384,0.9723664,0.01766146],"study_design_scores_gemma":[0.0008293946,0.0015622596,0.0035018623,0.000082251485,0.000047290072,0.00007230897,0.000005980581,0.000028780161,0.0018521535,0.0016685475,0.9902252,0.00012397252],"about_ca_topic_score_codex":0.000006265892,"about_ca_topic_score_gemma":0.000012697068,"teacher_disagreement_score":0.19096121,"about_ca_system_score_codex":0.000012976689,"about_ca_system_score_gemma":0.0008590572,"threshold_uncertainty_score":0.9996746},"labels":[],"label_agreement":null},{"id":"W2034986487","doi":"10.1172/jci22831","title":"Persistent improvement in synaptic and cognitive functions in an Alzheimer mouse model after rolipram treatment","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Alzheimer's disease research and treatments","field":"Medicine","cited_by":429,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"School of Medicine, New York University; York University; University of Minnesota; National Institutes of Health; Alzheimer's Association","keywords":"Rolipram; Long-term potentiation; CREB; Neuroscience; Synaptic plasticity; Protein kinase A; Neurotransmission; Donepezil; Alzheimer's disease; Presenilin; Phosphodiesterase; Pharmacology; Medicine; Chemistry; Biology; Internal medicine; Cell biology; Phosphorylation; Biochemistry; Receptor; Dementia; Disease; Enzyme","score_opus":0.13273456056925528,"score_gpt":0.40745234143284087,"score_spread":0.27471778086358556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034986487","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966502,0.00174555,0.00005034762,0.0010341317,0.000040218787,0.00043137846,0.000012283475,0.0000052899973,0.00003057858],"genre_scores_gemma":[0.998504,0.00017016786,0.0007609096,0.00038229604,0.00009492805,0.000041839958,0.000019669402,0.000012301882,0.000013886958],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983953,0.00010398212,0.00082135637,0.0001949408,0.00029445533,0.00018992616],"domain_scores_gemma":[0.99879575,0.00010797634,0.00021467655,0.0001029487,0.00018918047,0.0005894834],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044525156,0.00012975256,0.00037439476,0.00020389153,0.000027755364,0.000021622127,0.000028945262,0.00010171956,0.000013006099],"category_scores_gemma":[0.00020680188,0.00009445557,0.00016875971,0.00010893279,0.0001659072,0.0003061082,0.000014713206,0.00027605673,0.000007826387],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005228193,0.0063340734,0.9640802,0.000028953124,0.0069240527,0.00051474717,0.0009161654,0.0028319284,0.00037739443,0.000042639047,0.0000081151,0.012713539],"study_design_scores_gemma":[0.040921688,0.026446909,0.8960158,0.00080197846,0.0054225135,0.00009879239,0.001344342,0.023342958,0.0016144015,0.0036758222,0.000006976382,0.0003077977],"about_ca_topic_score_codex":0.00008726511,"about_ca_topic_score_gemma":0.00018484364,"teacher_disagreement_score":0.06806438,"about_ca_system_score_codex":0.00017959342,"about_ca_system_score_gemma":0.0006057991,"threshold_uncertainty_score":0.38517866},"labels":[],"label_agreement":null},{"id":"W2035729149","doi":"10.1172/jci36551","title":"Triggering of TLR7 and TLR8 expressed by human lung cancer cells induces cell survival and chemoresistance","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":232,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Cancéropôle Ile de France; Institut National Du Cancer; Institute of Cancer Research; Institut National de la Santé et de la Recherche Médicale","keywords":"TLR7; Cancer research; Lung cancer; Biology; Downregulation and upregulation; Immunotherapy; Cell; Immune system; Immunology; Medicine; Pathology; Innate immune system; Toll-like receptor; Gene","score_opus":0.028887337097523405,"score_gpt":0.3334194015012781,"score_spread":0.3045320644037547,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035729149","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966668,0.0020626283,0.000025030316,0.0003613367,0.00071164983,0.00007109151,0.000005673418,0.0000046814466,0.00009111942],"genre_scores_gemma":[0.99868655,0.0007317379,0.00016910434,0.000040145016,0.00009695839,0.0000015899221,0.000008349024,0.000007202675,0.00025836818],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99853265,0.0002370553,0.000961009,0.000110877336,0.00005526685,0.00010314194],"domain_scores_gemma":[0.9982213,0.00046873576,0.0010242889,0.00009289989,0.00015180964,0.000041008425],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001381822,0.00009087915,0.00036212834,0.00006248326,0.00007679024,0.000015997142,0.00009552987,0.00025813567,0.000042823754],"category_scores_gemma":[0.00033059742,0.00007527764,0.000061527324,0.000053040345,0.00035334032,0.00022775438,0.000026809395,0.0005283144,0.0000011826462],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017062813,0.000033561842,0.006093274,0.000050627652,0.000043636064,6.2942377e-7,0.00019943749,0.0000013128297,0.9906552,0.00008302072,0.0012990728,0.0013696032],"study_design_scores_gemma":[0.001450625,0.00012395348,0.031782873,0.00008495705,0.00005598088,0.0000039404276,0.00006381358,0.000014078239,0.96392024,0.00023492219,0.0021868963,0.00007773619],"about_ca_topic_score_codex":0.000026640715,"about_ca_topic_score_gemma":0.000009565992,"teacher_disagreement_score":0.026734972,"about_ca_system_score_codex":0.0000061404594,"about_ca_system_score_gemma":0.000086157,"threshold_uncertainty_score":0.3069733},"labels":[],"label_agreement":null},{"id":"W2036959160","doi":"10.1172/jci38420","title":"Hoofbeats, zebras, and insights into insulin resistance","year":2009,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Metabolism, Diabetes, and Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Robarts Clinical Trials; Western University","funders":"Robarts Research Institute; U.S. Public Health Service; National Institutes of Health; Ontario Genomics Institute; Ontario Genomics; Genome Canada; Heart and Stroke Foundation of Canada; Pfizer","keywords":"AKT2; Phenotype; Biology; Insulin resistance; Insulin receptor; Gluconeogenesis; Genetics; Serine; Insulin; Gene; Signal transduction; Phosphorylation; PI3K/AKT/mTOR pathway; Endocrinology; AKT1","score_opus":0.032661406726673614,"score_gpt":0.32358078354173864,"score_spread":0.290919376815065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036959160","genre_codex":"review","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.41869614,0.49955812,0.00012496572,0.079324625,0.0017198643,0.00018727365,0.00000890147,0.000008042467,0.00037208875],"genre_scores_gemma":[0.011423594,0.25670588,0.004161628,0.70213777,0.023890847,0.000005443002,0.00022746505,0.000057194866,0.0013901633],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9971237,0.0004433755,0.0015046245,0.00035379856,0.00038495747,0.00018953894],"domain_scores_gemma":[0.99743336,0.000113374546,0.0015391306,0.00031707162,0.00039830813,0.00019875076],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00090257137,0.0002510038,0.00068988756,0.00009841938,0.000059604332,0.00005870091,0.00028239284,0.0012195902,0.000010287903],"category_scores_gemma":[0.0013281276,0.00020728407,0.00027006457,0.000088282344,0.00029529896,0.000017105445,0.000044977816,0.001387879,0.0000047234835],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008805392,0.000024522436,0.00037041592,0.000090163754,0.00011863216,0.000031825166,0.00005884769,0.0000022800555,0.0010901828,0.000041459403,0.9535793,0.044504326],"study_design_scores_gemma":[0.0007910274,0.00034095522,0.0025823473,0.00021580733,0.00011880484,0.000007440559,0.0000065485065,0.000003355462,0.0036661294,0.013625387,0.97841114,0.00023105595],"about_ca_topic_score_codex":0.000003133645,"about_ca_topic_score_gemma":0.000019000445,"teacher_disagreement_score":0.62281317,"about_ca_system_score_codex":0.000017275934,"about_ca_system_score_gemma":0.0004283989,"threshold_uncertainty_score":0.94065964},"labels":[],"label_agreement":null},{"id":"W2037429771","doi":"10.1172/jci59348","title":"Protease nexin 1 inhibits hedgehog signaling in prostate adenocarcinoma","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Hedgehog Signaling Pathway Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; BC Cancer Agency; University of Toronto; University Health Network","funders":"Canadian Institutes of Health Research; Cancer Research UK","keywords":"Cancer research; Hedgehog; Hedgehog signaling pathway; Angiogenesis; Biology; Prostate cancer; Tumor progression; GLI1; Sonic hedgehog; Signal transduction; Internal medicine; Endocrinology; Cell biology; Medicine; Cancer; Genetics","score_opus":0.08923130146904419,"score_gpt":0.36316274326613707,"score_spread":0.2739314417970929,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2037429771","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99642515,0.0020966858,0.00026565837,0.00047746737,0.00043519682,0.00021408695,0.000002548176,0.000005027668,0.00007816664],"genre_scores_gemma":[0.99404234,0.00007670499,0.003670353,0.00056026585,0.0015309406,0.000008584429,0.000009682417,0.000019754976,0.00008137079],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975056,0.00043055424,0.001376629,0.00017026214,0.00024213927,0.00027480797],"domain_scores_gemma":[0.9984299,0.00011441724,0.0007569712,0.00015241744,0.00025306482,0.00029320508],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003453373,0.00014359875,0.000340352,0.00009798665,0.000045661604,0.00001969914,0.00014006853,0.00016449872,0.0000058423843],"category_scores_gemma":[0.0035283843,0.00012267074,0.00016863707,0.00015854422,0.00016833746,0.000029907007,0.00006657501,0.00037602006,0.000010493033],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016345114,0.0001351899,0.7424883,0.00003388342,0.00004501748,0.000009870952,0.00035838442,0.00020358323,0.25460485,0.00003633522,0.00063717365,0.001283928],"study_design_scores_gemma":[0.0023546854,0.0011710513,0.3770267,0.00033351776,0.00006112042,0.00007472873,0.00030450695,0.000084175284,0.6138558,0.0008695737,0.0035575505,0.00030658583],"about_ca_topic_score_codex":0.000004416408,"about_ca_topic_score_gemma":0.0000035787793,"teacher_disagreement_score":0.36546162,"about_ca_system_score_codex":0.000020975194,"about_ca_system_score_gemma":0.0002421088,"threshold_uncertainty_score":0.50023675},"labels":[],"label_agreement":null},{"id":"W2039617287","doi":"10.1172/jci13265","title":"Cardiomyocyte overexpression of iNOS in mice results in peroxynitrite generation, heart block, and sudden death","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Viral Infections and Immunology Research","field":"Medicine","cited_by":287,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; St. Michael's Hospital; Toronto General Hospital; University of Toronto; Heart and Stroke Foundation","funders":"Medical Research Council; Canadian Institutes of Health Research; Alberta Heritage Foundation for Medical Research; Fondation pour la Recherche Médicale; Medical Research Council Canada; Heart and Stroke Foundation of Canada","keywords":"Peroxynitrite; Heart failure; Myocarditis; Nitric oxide synthase; Dilated cardiomyopathy; Transgene; Genetically modified mouse; Medicine; Cardiomyopathy; Downregulation and upregulation; Sudden death; Sudden cardiac death; Internal medicine; Cardiac fibrosis; Cardiology; Nitric oxide; Biology; Superoxide","score_opus":0.17673042859814994,"score_gpt":0.4099456273707114,"score_spread":0.23321519877256144,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2039617287","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99528563,0.0009249599,0.0000058021424,0.0032975215,0.00010362556,0.00014549763,0.000002137286,0.0000027418137,0.00023210487],"genre_scores_gemma":[0.99718463,0.0012349928,0.00095593254,0.00023237507,0.00025367909,0.0000018395609,0.0000030390493,0.0000059522413,0.00012757392],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9976579,0.0003995143,0.0014701277,0.00012972257,0.00022826887,0.00011448773],"domain_scores_gemma":[0.998762,0.000330354,0.0003797151,0.00011483594,0.00030131883,0.00011176636],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021409139,0.00007234524,0.00045218208,0.00033425458,0.00002821841,0.000011494343,0.000045186815,0.00018684441,0.000013954871],"category_scores_gemma":[0.0034182752,0.000057686975,0.00009370681,0.0002756624,0.00016022858,0.00022431045,0.000026931002,0.00065132417,0.0000030617884],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00060214597,0.00033302628,0.8350669,0.0000428414,0.00004766206,0.000028994678,0.00035926694,0.000192143,0.15694205,0.0000371822,0.0031558883,0.003191872],"study_design_scores_gemma":[0.0060395924,0.0014015058,0.96921325,0.00064513285,0.00003159808,0.00017579606,0.000064140724,0.006916403,0.014038349,0.0001875154,0.0012160197,0.0000706723],"about_ca_topic_score_codex":0.00011639396,"about_ca_topic_score_gemma":0.000019975536,"teacher_disagreement_score":0.14290372,"about_ca_system_score_codex":0.000035238736,"about_ca_system_score_gemma":0.000099289246,"threshold_uncertainty_score":0.40922415},"labels":[],"label_agreement":null},{"id":"W2039970106","doi":"10.1172/jci41024","title":"A view from a European medical academic who spends time in the US","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Health and Medical Research Impacts","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"University of Pennsylvania","keywords":"Health care; Population; Disadvantaged; Medicine; Economic growth; Political science; Law; Environmental health; Economics","score_opus":0.3490166241864983,"score_gpt":0.5465915465808018,"score_spread":0.19757492239430346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2039970106","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7499494,0.0005263263,0.000052424908,0.24610555,0.000120318924,0.00015195487,0.0000010224958,0.0000064571036,0.0030865807],"genre_scores_gemma":[0.79789823,0.0026824507,0.00048760633,0.19547637,0.0032946006,6.6956665e-7,0.000009722641,0.000009754596,0.00014061616],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9938557,0.0017448273,0.001985971,0.00013631528,0.0018865817,0.000390597],"domain_scores_gemma":[0.991403,0.0025192508,0.0005736409,0.0002200226,0.00019065899,0.005093448],"candidate_categories":["metaresearch","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.024319986,0.00009764622,0.00055598695,0.00011631922,0.000031158695,0.00001711168,0.00032681582,0.0002494044,0.00037082442],"category_scores_gemma":[0.18832485,0.000053175685,0.00015820762,0.0003210019,0.000233009,0.0001580579,0.00001961986,0.0031548792,0.00017442861],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00085380394,0.00047382625,0.065258995,0.0000614433,0.000046983176,0.0022852656,0.0008791331,0.0000019441638,0.0006466126,0.00021086086,0.20253383,0.72674733],"study_design_scores_gemma":[0.003793438,0.0020679382,0.8945238,0.002306773,0.00005675376,0.0002603937,0.000027554273,0.001066321,0.000048172966,0.0049825027,0.09079472,0.00007164766],"about_ca_topic_score_codex":0.000017033197,"about_ca_topic_score_gemma":0.0000035197475,"teacher_disagreement_score":0.82926476,"about_ca_system_score_codex":0.00005595284,"about_ca_system_score_gemma":0.003689635,"threshold_uncertainty_score":0.9991449},"labels":[],"label_agreement":null},{"id":"W2040047122","doi":"10.1172/jci17975","title":"PTG gene deletion causes impaired glycogen synthesis and developmental insulin resistance","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Metabolism, Diabetes, and Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":98,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Glycogen; Glycogen synthase; Insulin resistance; Internal medicine; Endocrinology; Biology; Glycogen debranching enzyme; Hyperinsulinemia; Insulin receptor; Insulin; Glycogen branching enzyme; Medicine","score_opus":0.04539935447541658,"score_gpt":0.31325581314020307,"score_spread":0.26785645866478647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2040047122","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96230525,0.036838785,0.00027344192,0.00008272445,0.00028713542,0.00006166394,0.000005077547,0.0000029633052,0.00014293939],"genre_scores_gemma":[0.94948334,0.031818695,0.017016748,0.0009025632,0.0006406254,0.0000061258065,0.0000089837595,0.00001526846,0.00010763278],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99841964,0.0003019743,0.0007992094,0.00016926641,0.00017514896,0.00013477566],"domain_scores_gemma":[0.99893016,0.000106678155,0.0004934528,0.000095057665,0.0001973012,0.0001773478],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014588409,0.00010313126,0.0002577493,0.000030873518,0.00006199601,0.000023176271,0.0000805249,0.00016367802,0.000022018676],"category_scores_gemma":[0.0034433277,0.00008959987,0.00009848084,0.00007397832,0.00013629359,0.0000148303125,0.000017363249,0.000120648474,0.0000032696194],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013371248,0.00034344257,0.1716014,0.00016937593,0.00087811705,0.00003273002,0.00030978522,0.00014114247,0.5876665,0.001495007,0.031518545,0.20450681],"study_design_scores_gemma":[0.0011361864,0.00019316979,0.048728023,0.000082011844,0.00010761592,0.000041499494,0.00006394723,0.0000066031494,0.6777614,0.0027213043,0.26894245,0.00021580794],"about_ca_topic_score_codex":0.0000017740193,"about_ca_topic_score_gemma":0.000023375986,"teacher_disagreement_score":0.23742391,"about_ca_system_score_codex":0.00001585597,"about_ca_system_score_gemma":0.00033579543,"threshold_uncertainty_score":0.41222337},"labels":[],"label_agreement":null},{"id":"W2040267618","doi":"10.1172/jci41490","title":"Rb deletion in mouse mammary progenitors induces luminal-B or basal-like/EMT tumor subtypes depending on p53 status","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cancer-related Molecular Pathways","field":"Medicine","cited_by":144,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research; University Health Network","funders":"University of Toronto; National Institute of Environmental Health Sciences; Canadian Breast Cancer Research Alliance; V Foundation for Cancer Research; Breast Cancer Research Foundation","keywords":"Cancer research; Biology; Progenitor cell; Breast cancer; Estrogen receptor; Mammary tumor; Tumor suppressor gene; Retinoblastoma; Progesterone receptor; Epithelial–mesenchymal transition; Pathology; Cancer; Stem cell; Carcinogenesis; Metastasis; Medicine; Cell biology; Gene; Genetics","score_opus":0.06079831594064462,"score_gpt":0.3635933413710733,"score_spread":0.3027950254304287,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2040267618","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953036,0.00007392023,0.00011556724,0.0016335383,0.0023346692,0.00034945892,0.0000035447651,0.0000290375,0.00015668532],"genre_scores_gemma":[0.99013495,0.00013765955,0.006847318,0.0013149529,0.0013864945,0.00000907538,0.000016632799,0.000038816885,0.00011411041],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99680084,0.0002805908,0.0016959656,0.0002714014,0.0006529244,0.00029826758],"domain_scores_gemma":[0.99722284,0.000496106,0.0011350864,0.00026905315,0.00033700507,0.0005398921],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022384422,0.00019227558,0.0005572798,0.0004151873,0.00005296023,0.000045689667,0.00015276967,0.00033681138,0.000045434772],"category_scores_gemma":[0.0059575737,0.00015031493,0.00021664379,0.00038398235,0.00017499797,0.00034701428,0.00003349153,0.0020538026,0.00002271828],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0051088547,0.0012246824,0.24957427,0.00024566666,0.00029198374,0.0019769336,0.00065046945,0.00022631818,0.7019088,0.00055228337,0.0044259634,0.03381375],"study_design_scores_gemma":[0.012769413,0.0075332057,0.39595374,0.0018394288,0.0004703812,0.0012302096,0.0003854499,0.0023559753,0.5653087,0.0023845308,0.009041381,0.00072757056],"about_ca_topic_score_codex":0.000049436716,"about_ca_topic_score_gemma":0.00017533534,"teacher_disagreement_score":0.14637949,"about_ca_system_score_codex":0.00014683146,"about_ca_system_score_gemma":0.001252317,"threshold_uncertainty_score":0.8922864},"labels":[],"label_agreement":null},{"id":"W2040834736","doi":"10.1172/jci34653","title":"The American Society for Clinical Investigation, 1952–1975: a personal perspective","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Health and Medical Research Impacts","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Perspective (graphical); TRACE (psycholinguistics); Quarter (Canadian coin); Focus (optics); Sociology; Environmental ethics; History; Philosophy","score_opus":0.47757199689291685,"score_gpt":0.5688279684160146,"score_spread":0.09125597152309772,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2040834736","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.83024484,0.0005174956,0.00074720866,0.16722332,0.000565843,0.0005153051,0.0000060532107,0.000018810055,0.00016113868],"genre_scores_gemma":[0.8456911,0.013741304,0.02081802,0.10665151,0.011523739,0.000035495104,0.000019019413,0.00005724122,0.001462559],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9945149,0.00065981457,0.0025631848,0.00027857634,0.0013429534,0.0006405743],"domain_scores_gemma":[0.9561702,0.020506496,0.00397243,0.00050327816,0.0058498518,0.012997715],"candidate_categories":["metaresearch","sts"],"consensus_categories":[],"category_scores_codex":[0.01657622,0.00016826579,0.00088385347,0.00007634692,0.00046570494,0.000031858814,0.0002109566,0.00021554083,0.000015030626],"category_scores_gemma":[0.23362918,0.00010132702,0.0012128139,0.00044313495,0.0038936106,0.0002187536,0.00003286234,0.0017807592,0.000016668047],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026765557,0.0003424526,0.2623748,0.00008708789,0.0004979929,0.000051794897,0.0016180687,0.0000013085022,0.00017789823,0.00093811343,0.6982944,0.032939527],"study_design_scores_gemma":[0.009579046,0.01034887,0.74775416,0.0003612808,0.0002900826,0.00047206684,0.0023234708,0.0033512292,0.00017104027,0.008496637,0.216635,0.00021712457],"about_ca_topic_score_codex":0.000046673485,"about_ca_topic_score_gemma":0.0000099080635,"teacher_disagreement_score":0.48537937,"about_ca_system_score_codex":0.00022521024,"about_ca_system_score_gemma":0.01586513,"threshold_uncertainty_score":0.9988172},"labels":[],"label_agreement":null},{"id":"W2041119309","doi":"10.1172/jci27019","title":"Cardioprotective c-kit+ cells are from the bone marrow and regulate the myocardial balance of angiogenic cytokines","year":2006,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Mesenchymal stem cell research","field":"Medicine","cited_by":517,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Toronto General Hospital; University Health Network","funders":"Canadian Institutes of Health Research; University of Toronto; Heart and Stroke Foundation of Canada","keywords":"Bone marrow; Angiogenesis; Cancer research; Stem cell; Progenitor cell; Bone Marrow Stem Cell; Medicine; Endothelial stem cell; Biology; Cell biology; Immunology","score_opus":0.05326937716415785,"score_gpt":0.3334121574768757,"score_spread":0.28014278031271783,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2041119309","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9881285,0.002132366,0.000115227085,0.008630072,0.00030132374,0.00036410624,0.000012768691,0.000005093294,0.00031053825],"genre_scores_gemma":[0.9964363,0.00026914137,0.00063189724,0.0003410662,0.0020931824,0.0000036955216,0.0000034543555,0.000013155173,0.00020808725],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9971767,0.00056229695,0.0011757839,0.00016430956,0.0007645437,0.00015636707],"domain_scores_gemma":[0.9963272,0.0015803233,0.0011066418,0.0002970923,0.0005380133,0.0001506871],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0034017724,0.0001143734,0.0006103921,0.000045877496,0.00008134892,0.000027246144,0.0001544598,0.00015049151,0.000019024867],"category_scores_gemma":[0.0017298217,0.000058074755,0.00036983937,0.00022752231,0.0006351589,0.000092777154,0.000055441258,0.0005958156,0.0000049100518],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001436636,0.00011416529,0.82794553,0.00008440924,0.00058878976,0.00010892781,0.00027793105,0.00034281387,0.14736079,0.00018100547,0.016734302,0.0048247115],"study_design_scores_gemma":[0.0014204446,0.0003347739,0.9661501,0.00027480148,0.00023939957,0.00006348443,0.000109874294,0.0005600717,0.023706257,0.0054031797,0.0016744204,0.00006320039],"about_ca_topic_score_codex":0.0002595738,"about_ca_topic_score_gemma":0.000023242888,"teacher_disagreement_score":0.13820457,"about_ca_system_score_codex":0.0000310659,"about_ca_system_score_gemma":0.0001913576,"threshold_uncertainty_score":0.25885555},"labels":[],"label_agreement":null},{"id":"W2041249840","doi":"10.1172/jci24311","title":"Notch alters VEGF responsiveness in human and murine endothelial cells by direct regulation of VEGFR-3 expression","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Angiogenesis and VEGF in Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":164,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"National Institutes of Health; National Cancer Institute; National Institute of Diabetes and Digestive and Kidney Diseases; U.S. Department of Defense; National Heart, Lung, and Blood Institute; American Heart Association","keywords":"Hairless; Notch signaling pathway; Biology; Cell biology; Vascular endothelial growth factor C; Endothelial stem cell; Lymphangiogenesis; Lymphatic Endothelium; Endothelium; Cancer research; Lymphatic system; Vascular endothelial growth factor B; Cell fate determination; Vascular endothelial growth factor A; Notch proteins; In vitro; Signal transduction; Immunology; Vascular endothelial growth factor; Endocrinology; Transcription factor; Genetics; Cancer; Gene; VEGF receptors","score_opus":0.035336132152729585,"score_gpt":0.35927799344070727,"score_spread":0.3239418612879777,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2041249840","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984705,0.00044233687,0.0006289732,0.00009260779,0.00020675438,0.00006418615,0.0000063193916,0.0000012458994,0.00008709084],"genre_scores_gemma":[0.99810076,0.0002869995,0.000958294,0.0001313526,0.00040623933,8.3350017e-7,0.000013514458,0.000009637342,0.00009237313],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99850696,0.00017303939,0.0009185582,0.00014120608,0.0001636813,0.000096531825],"domain_scores_gemma":[0.99884325,0.00012757367,0.0006780034,0.000107480904,0.00014812956,0.000095562355],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019622918,0.00007907847,0.00023415321,0.000067596906,0.00002661717,0.000006749635,0.00007792127,0.00016404514,0.000006073058],"category_scores_gemma":[0.00031094925,0.00006766666,0.00009789342,0.00006771438,0.00014298964,0.000012125944,0.000028620983,0.00010008464,2.221231e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048213778,0.000047365833,0.03436532,0.000016171629,0.000012626566,0.0000016629099,0.00003634335,0.00007106326,0.96228737,0.000010804541,0.00080183055,0.001867307],"study_design_scores_gemma":[0.0009018534,0.00041169216,0.10097535,0.000110218454,0.000013004447,0.0000033290148,0.000025130728,0.0000198171,0.8945323,0.00016037365,0.0027817453,0.00006514368],"about_ca_topic_score_codex":0.000011243832,"about_ca_topic_score_gemma":0.000010420406,"teacher_disagreement_score":0.06775502,"about_ca_system_score_codex":0.000011704788,"about_ca_system_score_gemma":0.00006485014,"threshold_uncertainty_score":0.27593663},"labels":[],"label_agreement":null},{"id":"W2042355069","doi":"10.1172/jci61067","title":"Inhibition of CXCR2 profoundly suppresses inflammation-driven and spontaneous tumorigenesis","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Chemokine receptors and signaling","field":"Medicine","cited_by":383,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Medical Research Council; Cancer Research UK; Wellcome Trust","keywords":"CXC chemokine receptors; Carcinogenesis; Cancer research; Inflammation; PTEN; Chemokine; Colitis; Immunology; Cancer; Mediator; Biology; Adenocarcinoma; Chemokine receptor; Medicine; Signal transduction; Internal medicine; Endocrinology; Cell biology","score_opus":0.058770457825713766,"score_gpt":0.35333346200227517,"score_spread":0.2945630041765614,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042355069","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980874,0.00026821083,0.00017995303,0.0008875485,0.00030981042,0.00012088731,0.0000013532416,0.0000064920687,0.00013832311],"genre_scores_gemma":[0.9940742,0.00019899166,0.0039187497,0.00010090848,0.0016481815,0.0000011321771,0.000008635306,0.000009839822,0.000039326773],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99815553,0.00010393752,0.0012557626,0.00007061699,0.00030809495,0.00010603269],"domain_scores_gemma":[0.9978949,0.00043708624,0.0009442759,0.00007682247,0.00039672287,0.00025020604],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012243383,0.000081086,0.00041628606,0.00009553107,0.00002884182,0.000010977838,0.00002865753,0.00011140945,0.000055066237],"category_scores_gemma":[0.001843821,0.00006219049,0.00012734067,0.000106013176,0.00013317568,0.00030675132,0.000015175599,0.0002172585,0.000002541246],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042733294,0.00021144106,0.76264864,0.00035163877,0.00012213291,0.0000582736,0.00085427304,0.000041341962,0.22526614,0.00039979006,0.00063411705,0.008984852],"study_design_scores_gemma":[0.003236626,0.0013262894,0.43125913,0.0013049328,0.0006037471,0.002510742,0.0003242448,0.0007303333,0.55402726,0.0022924116,0.002176597,0.00020766888],"about_ca_topic_score_codex":0.000005753625,"about_ca_topic_score_gemma":0.000001805508,"teacher_disagreement_score":0.33138955,"about_ca_system_score_codex":0.00002554206,"about_ca_system_score_gemma":0.00014771389,"threshold_uncertainty_score":0.25360546},"labels":[],"label_agreement":null},{"id":"W2043583876","doi":"10.1172/jci62888","title":"Epidermal growth factor receptor inhibits colitis-associated cancer in mice","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":84,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Canadian Institutes of Health Research; Crohn's and Colitis Foundation; National Institutes of Health; Vanderbilt University; Vanderbilt Digestive Diseases Research Center, Vanderbilt University Medical Center; Crohn's and Colitis Foundation of America","keywords":"Epidermal growth factor receptor; Inflammation; Cancer; Colorectal cancer; Colitis; Inflammatory bowel disease; Carcinogenesis; Epidermal growth factor; Mouse model of colorectal and intestinal cancer; Cancer research; Medicine; Immunology; Pathogenesis; Biology; Disease; Internal medicine; Receptor","score_opus":0.04615041453443422,"score_gpt":0.34919658322679936,"score_spread":0.3030461686923651,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2043583876","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99814594,0.00023413094,0.000019177376,0.0005192727,0.0008648388,0.00009887433,0.000029473247,0.0000038031876,0.00008452104],"genre_scores_gemma":[0.9970387,0.00018052272,0.0002849479,0.0010154186,0.0013481309,0.0000048699826,0.000023441831,0.00001527525,0.000088697445],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99786776,0.0005064297,0.0010777853,0.000115859715,0.00019987885,0.00023226465],"domain_scores_gemma":[0.99833125,0.000096642485,0.0008099166,0.00008298175,0.00032352377,0.00035571493],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014096752,0.00010776082,0.00023571751,0.000053188174,0.000028928185,0.000013337027,0.00012129983,0.00025851218,0.000058904137],"category_scores_gemma":[0.0039956863,0.00009945942,0.00015845627,0.000085543026,0.000109241046,0.000036919344,0.000035453373,0.0002875259,0.000012533462],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002652391,0.00013458461,0.9535382,0.000018119727,0.00005432879,0.0000069855873,0.000088458866,0.000020418205,0.04187153,0.000060530016,0.0033089265,0.0006327139],"study_design_scores_gemma":[0.0011052071,0.00009299417,0.9665401,0.00008619274,0.000022939566,0.0000039656325,0.000021068407,0.00002507449,0.031064073,0.000155393,0.00076613895,0.000116858195],"about_ca_topic_score_codex":0.000015140247,"about_ca_topic_score_gemma":0.00007347571,"teacher_disagreement_score":0.013001928,"about_ca_system_score_codex":0.000049838138,"about_ca_system_score_gemma":0.00034834762,"threshold_uncertainty_score":0.47834983},"labels":[],"label_agreement":null},{"id":"W2043614750","doi":"10.1172/jci67232","title":"Potential applications for biguanides in oncology","year":2013,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Metabolism, Diabetes, and Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":185,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"University of Cambridge","keywords":"Metformin; Medicine; Drug; Clinical trial; Pharmacology; Bioinformatics; Diabetes mellitus; Drug discovery; Insulin; Internal medicine; Biology; Endocrinology","score_opus":0.14589215009706116,"score_gpt":0.4724304834120994,"score_spread":0.32653833331503823,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2043614750","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005007033,0.99639016,0.0015103437,0.00005332859,0.00077717006,0.0006942297,0.000018820743,0.0000019958952,0.00005324669],"genre_scores_gemma":[0.000027144535,0.99143857,0.0040268367,0.00031875455,0.003692288,0.00022493635,0.00013403485,0.000027298951,0.00011014881],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99698806,0.00036623873,0.0021160818,0.00023804339,0.00012982826,0.00016172616],"domain_scores_gemma":[0.9970979,0.00020377277,0.0020100274,0.00020927176,0.0003097171,0.00016929426],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016061501,0.0001789875,0.0012596147,0.00011612137,0.000030129426,0.000023385275,0.0002918755,0.0007178005,0.000021558977],"category_scores_gemma":[0.0007895339,0.00013840878,0.00071956805,0.00012524852,0.0001435392,0.0000086213095,0.000038551643,0.00038726567,0.000012913478],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011825125,0.000060953924,0.000019687772,0.0007747112,0.00009421123,5.9977157e-7,0.0000024295805,0.000005151402,0.00003894609,0.0001129979,0.005388755,0.99348974],"study_design_scores_gemma":[0.0005049041,0.0003350396,0.000024453584,0.0004728222,0.00036496966,0.000013653112,0.000004984671,0.0000074998043,0.00006487383,0.0014705231,0.99660087,0.00013542843],"about_ca_topic_score_codex":0.0000022200597,"about_ca_topic_score_gemma":0.0000067228416,"teacher_disagreement_score":0.9933543,"about_ca_system_score_codex":0.00003140814,"about_ca_system_score_gemma":0.0011750307,"threshold_uncertainty_score":0.5644146},"labels":[],"label_agreement":null},{"id":"W2043623672","doi":"10.1172/jci70230","title":"Ras pathway inhibition prevents neovascularization by repressing endothelial cell sprouting","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Angiogenesis and VEGF in Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Eye Institute; Manpei Suzuki Diabetes Foundation; National Heart, Lung, and Blood Institute; National Cancer Institute; National Institutes of Health; Japan Society for the Promotion of Science; Lowy Medical Research Institute","keywords":"Angiogenesis; Neovascularization; Sprouting angiogenesis; Cancer research; microRNA; Vascular endothelial growth factor; Immunology; Vascular endothelial growth factor A; Macular degeneration; Biology; Cell biology; Medicine; VEGF receptors; Ophthalmology; Biochemistry","score_opus":0.033054122521371236,"score_gpt":0.3140908320643114,"score_spread":0.28103670954294013,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2043623672","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9863942,0.0005548861,0.012061145,0.00022281885,0.00037353675,0.00013282524,0.0000038189855,0.00000420139,0.00025253787],"genre_scores_gemma":[0.99424905,0.00021374601,0.0032671005,0.00062427664,0.0012468181,0.000005285408,0.000053052427,0.000016797338,0.000323876],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983176,0.00023004093,0.00093777216,0.00017911267,0.00021575566,0.00011974327],"domain_scores_gemma":[0.9985024,0.000039148712,0.0009284755,0.00014313748,0.00026160985,0.00012527661],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000993863,0.0000969275,0.00019121236,0.000028438217,0.000063481595,0.000049900995,0.000085573774,0.00020070012,0.00003414727],"category_scores_gemma":[0.000523844,0.0000823456,0.00023547064,0.0000616143,0.00007629556,0.00003304992,0.00003412449,0.0001420637,0.000009103331],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027195641,0.000063755375,0.02169299,0.000014663601,0.000034147943,8.892802e-7,0.000026089037,0.000108159686,0.9599245,0.000011241519,0.0062269093,0.011869418],"study_design_scores_gemma":[0.0011267732,0.0003294933,0.00983594,0.00009835153,0.000041780066,0.000011776698,0.00003407927,0.00036305492,0.980187,0.0007912581,0.007039571,0.00014094403],"about_ca_topic_score_codex":0.000013758105,"about_ca_topic_score_gemma":7.356205e-7,"teacher_disagreement_score":0.020262437,"about_ca_system_score_codex":0.0000130821045,"about_ca_system_score_gemma":0.00013058,"threshold_uncertainty_score":0.3357956},"labels":[],"label_agreement":null},{"id":"W2043714441","doi":"10.1172/jci60560","title":"Mutations in the ER-shaping protein reticulon 2 cause the axon-degenerative disorder hereditary spastic paraplegia type 12","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Hereditary Neurological Disorders","field":"Neuroscience","cited_by":170,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Neurological Disorders and Stroke; Cambridge Institute for Medical Research, University of Cambridge; National Institutes of Health; Canada Excellence Research Chairs, Government of Canada; University of Miami; E-Rare; Spastic Paraplegia Foundation; Leonard M. Miller School of Medicine; Wellcome Trust; European Commission","keywords":"Hereditary spastic paraplegia; Frameshift mutation; Biology; Genetics; Mutation; Mutant protein; Gene; Cell biology; Phenotype","score_opus":0.23684033973893093,"score_gpt":0.39066549867703915,"score_spread":0.15382515893810822,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2043714441","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97642046,0.00017788564,0.00029729842,0.021173075,0.001122563,0.0005258773,0.0000040093064,0.000014496247,0.0002643189],"genre_scores_gemma":[0.99218595,0.000051604802,0.00035718243,0.006301552,0.0010306009,0.000022914297,0.0000034483735,0.000015045912,0.000031674448],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9947527,0.0027897013,0.001291514,0.00021128338,0.0006258623,0.000328951],"domain_scores_gemma":[0.9950873,0.0036004696,0.0007350852,0.00025934857,0.00012495392,0.00019280912],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.002923064,0.00016780132,0.00028880162,0.000076986464,0.00021128113,0.000059286205,0.0004803856,0.00014650547,0.0000771945],"category_scores_gemma":[0.023959158,0.00008872158,0.00014953133,0.0005605324,0.00082174246,0.0006879151,0.000048910544,0.0012089594,0.000048969687],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002488359,0.007031381,0.6463061,0.00025128596,0.00031424183,0.0012071895,0.03685663,0.033362985,0.12545195,0.05997324,0.06994675,0.016809853],"study_design_scores_gemma":[0.0029878013,0.0034093638,0.90197265,0.00028547714,0.0002616713,0.0004397096,0.0028885305,0.011449013,0.0068387985,0.0576416,0.011139057,0.0006863508],"about_ca_topic_score_codex":0.000018715004,"about_ca_topic_score_gemma":0.00006449967,"teacher_disagreement_score":0.2556665,"about_ca_system_score_codex":0.000023540351,"about_ca_system_score_gemma":0.0001692599,"threshold_uncertainty_score":0.98426247},"labels":[],"label_agreement":null},{"id":"W2044862076","doi":"10.1172/jci17416","title":"The calcium-sensing receptor is required for normal calcium homeostasis independent of parathyroid hormone","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Parathyroid Disorders and Treatments","field":"Medicine","cited_by":202,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Medical Research Council; National Institutes of Health","keywords":"Calcium-sensing receptor; Endocrinology; Internal medicine; Parathyroid hormone; Calcium; Null allele; Parathyroid gland; Calcium metabolism; Hyperparathyroidism; Receptor; Parathyroid chief cell; Homeostasis; Biology; Phenotype; Medicine; Gene; Genetics","score_opus":0.1276936477273825,"score_gpt":0.40151334465723043,"score_spread":0.2738196969298479,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2044862076","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98777074,0.0056611365,0.0025947918,0.002771961,0.0004408672,0.0003883433,0.00001530604,0.000006764516,0.0003501039],"genre_scores_gemma":[0.99010164,0.000972281,0.007530738,0.0007258169,0.0003000846,0.0000041764038,0.0000109387465,0.000020321593,0.00033402798],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99691975,0.00023723883,0.0019136716,0.00017197343,0.0005169754,0.0002403797],"domain_scores_gemma":[0.99640244,0.000823194,0.0014978753,0.000242576,0.00070722355,0.0003267142],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021953837,0.00015914632,0.00062418927,0.00008377352,0.00015073294,0.000028326798,0.000098480385,0.0002073739,0.000005985632],"category_scores_gemma":[0.0032734298,0.00010219871,0.00045801097,0.00019841148,0.00028411287,0.00018074748,0.000014487977,0.0003350475,0.000010021219],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.014530099,0.0032967199,0.14773224,0.00012990025,0.003570522,0.00010545937,0.002662225,0.00012322357,0.3173033,0.005025707,0.4648002,0.040720403],"study_design_scores_gemma":[0.057528675,0.018429197,0.41117084,0.00037612199,0.0028659476,0.00048084414,0.002287843,0.0020078474,0.36757305,0.025984082,0.11042096,0.0008745841],"about_ca_topic_score_codex":0.000013459256,"about_ca_topic_score_gemma":0.000003708938,"teacher_disagreement_score":0.35437924,"about_ca_system_score_codex":0.00005964347,"about_ca_system_score_gemma":0.00051186985,"threshold_uncertainty_score":0.41675425},"labels":[],"label_agreement":null},{"id":"W2045610340","doi":"10.1172/jci39027","title":"Extracellular K+ concentration controls cell surface density of IKr in rabbit hearts and of the HERG channel in human cell lines","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cardiac electrophysiology and arrhythmias","field":"Medicine","cited_by":150,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Queen's University","funders":"Canadian Institutes of Health Research; Queen's University; Heart and Stroke Foundation of Canada","keywords":"hERG; Internalization; Chemistry; Potassium channel; Extracellular; Ion channel; Cell biology; Biophysics; Pharmacology; Biochemistry; Cell; Biology; Receptor","score_opus":0.033968906032684695,"score_gpt":0.3253285174191095,"score_spread":0.2913596113864248,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045610340","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99651515,0.0010447252,0.000029903695,0.002040869,0.00011397868,0.00021121501,8.0913907e-7,0.0000015815907,0.00004179035],"genre_scores_gemma":[0.9990656,0.00019609107,0.00020237005,0.00029781548,0.00017628794,2.634026e-7,0.0000019377799,0.0000036362376,0.00005601145],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99810165,0.0003566161,0.001176303,0.00009869982,0.0001670995,0.00009963811],"domain_scores_gemma":[0.9985156,0.00030035365,0.0008274249,0.00010487016,0.0001767394,0.00007499152],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013135122,0.00007632121,0.0005638691,0.0000382496,0.000020900708,0.000003232939,0.000039769046,0.00015760002,0.0000028200393],"category_scores_gemma":[0.0004373137,0.000054546726,0.00015012083,0.00013023207,0.00020107113,0.00008555819,0.00000823232,0.000453045,2.2958902e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041785286,0.00020748723,0.13870177,0.00004610503,0.000010486548,0.00003409797,0.000236055,0.0016147525,0.85837746,0.00011014118,0.00007646048,0.00016736034],"study_design_scores_gemma":[0.0032356582,0.0008674691,0.63456094,0.00023751569,0.00005332382,0.000028816552,0.00003888868,0.0010613968,0.3568012,0.0030575097,0.000010735422,0.00004651048],"about_ca_topic_score_codex":0.000017771576,"about_ca_topic_score_gemma":0.000013512098,"teacher_disagreement_score":0.50157624,"about_ca_system_score_codex":0.000016106007,"about_ca_system_score_gemma":0.00013670356,"threshold_uncertainty_score":0.2224351},"labels":[],"label_agreement":null},{"id":"W2045666417","doi":"10.1172/jci22954","title":"Inhibition of adenine nucleotide translocator pore function and protection against apoptosis in vivo by an HIV protease inhibitor","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":91,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; National Research Council Canada; University of Ottawa","funders":"Canadian Institutes of Health Research; Alzheimer Society; National Institutes of Health; Sidaction; National Institute of Allergy and Infectious Diseases; Association pour la Recherche sur le Cancer; Styrelsen för Internationellt Utvecklingssamarbete; Wellcome Trust; Heart and Stroke Foundation of Canada","keywords":"Adenine nucleotide translocator; Apoptosis; Ritonavir; Nelfinavir; In vivo; Protease; Biology; Protease inhibitor (pharmacology); Lopinavir; Pharmacology; Mitochondrial permeability transition pore; Programmed cell death; Cell biology; Biochemistry; Virology; Enzyme; Virus; Viral load","score_opus":0.03840242906712337,"score_gpt":0.3086819531659627,"score_spread":0.2702795240988393,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045666417","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99635506,0.00030517494,0.0004030385,0.0023044143,0.00012656358,0.00042877957,0.00003444053,0.00001077554,0.00003174226],"genre_scores_gemma":[0.99900746,0.00010678767,0.0004104185,0.00012295725,0.00015476628,0.000019932097,0.00008187408,0.00001004854,0.00008573485],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979036,0.00052937726,0.0011538102,0.00017084855,0.00009040352,0.00015197882],"domain_scores_gemma":[0.99893457,0.00009088677,0.0005936419,0.0000932079,0.00017387408,0.00011383332],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011511763,0.000113659255,0.00032920198,0.00018073857,0.000057498717,0.000012206313,0.000048906357,0.0002454181,0.000063847714],"category_scores_gemma":[0.0004122781,0.000092637754,0.00009174292,0.00015107472,0.0002569772,0.00049523986,0.000010274727,0.0004939889,0.000015045207],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013333918,0.00075634266,0.021854704,0.000041680185,0.00007927152,0.0000022270426,0.00023035472,0.00004348726,0.9427912,0.000026058236,0.0019907455,0.030850502],"study_design_scores_gemma":[0.008364815,0.0038132148,0.030544084,0.00033319372,0.000084585445,0.00002771952,0.00022663033,0.00017260105,0.95216286,0.00050518045,0.0036085239,0.0001566108],"about_ca_topic_score_codex":0.000024802468,"about_ca_topic_score_gemma":0.000032117012,"teacher_disagreement_score":0.03069389,"about_ca_system_score_codex":0.00004965503,"about_ca_system_score_gemma":0.00013339274,"threshold_uncertainty_score":0.3777658},"labels":[],"label_agreement":null},{"id":"W2046287467","doi":"10.1172/jci66735","title":"Endothelin-2 deficiency causes growth retardation, hypothermia, and emphysema in mice","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Neuroscience of respiration and sleep","field":"Neuroscience","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; University of Ottawa; University of Toronto","funders":"Exploratory Research for Advanced Technology; Council for Science and Technology Policy; Johns Hopkins University; University of Texas Southwestern Medical Center; University of California, San Francisco; Macula Vision Research Foundation; Japan Science and Technology Agency; Canadian Institutes of Health Research; U.S. Department of Veterans Affairs; Japan Society for the Promotion of Science; Howard Hughes Medical Institute","keywords":"Knockout mouse; Biology; Hypothermia; Endocrinology; Internal medicine; Conditional gene knockout; Gene knockout; Homeothermy; Phenotype; Gene targeting; Lung; Immunology; Thermoregulation; Receptor; Medicine; Physiology; Gene; Genetics","score_opus":0.10618561738289656,"score_gpt":0.35082809304247176,"score_spread":0.2446424756595752,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2046287467","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99473494,0.00003404343,0.00020240001,0.0039442834,0.00040602777,0.00015474086,0.0000011281388,0.000011621167,0.0005107992],"genre_scores_gemma":[0.99303573,0.00020076898,0.0009201279,0.005530767,0.00015166105,0.0000032687517,1.6365952e-7,0.000008644198,0.00014887188],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9975112,0.0004509487,0.0012324791,0.00023921985,0.00040866714,0.00015744935],"domain_scores_gemma":[0.99764174,0.0010754348,0.0007696615,0.00010322658,0.00020070681,0.00020923918],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0011995506,0.000100535064,0.0002538878,0.00019183119,0.000078373494,0.0001276819,0.00022305554,0.000078747566,0.000046992187],"category_scores_gemma":[0.012893385,0.00007900531,0.00007428692,0.00033876926,0.00039414645,0.0010938289,0.000027855665,0.0003199747,0.00004517164],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031120013,0.00015436746,0.11392328,0.000020603857,0.0000017646241,0.000020932752,0.00032758125,0.00006382941,0.8698436,0.0040247687,0.00056068937,0.011027454],"study_design_scores_gemma":[0.0021438308,0.000887526,0.49794337,0.00012168796,0.000021283626,0.00017793132,0.00015084188,0.004746728,0.43359485,0.059104897,0.00078448246,0.00032254902],"about_ca_topic_score_codex":0.00002103341,"about_ca_topic_score_gemma":0.000009630804,"teacher_disagreement_score":0.43624875,"about_ca_system_score_codex":0.000015601343,"about_ca_system_score_gemma":0.00013215585,"threshold_uncertainty_score":0.9954214},"labels":[],"label_agreement":null},{"id":"W2046455986","doi":"10.1172/jci36136","title":"VEGF ameliorates pulmonary hypertension through inhibition of endothelial apoptosis in experimental lung fibrosis in rats","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pulmonary Hypertension Research and Treatments","field":"Medicine","cited_by":222,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; McMaster University Medical Centre; St. Joseph’s Healthcare Hamilton","funders":"Canadian Institutes of Health Research; Deutsche Forschungsgemeinschaft; McMaster University; GlaxoSmithKline","keywords":"Lung; Apoptosis; Pulmonary hypertension; Pulmonary fibrosis; Fibrosis; Medicine; VEGF receptors; Vascular endothelial growth factor A; Cancer research; Pharmacology; Internal medicine; Vascular endothelial growth factor; Cardiology; Biology; Biochemistry","score_opus":0.09236363496534912,"score_gpt":0.39093645252231524,"score_spread":0.29857281755696613,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2046455986","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99596876,0.0007355705,0.0000068836357,0.0026884873,0.0001487979,0.00026358303,0.0000043172267,0.0000066918897,0.00017692379],"genre_scores_gemma":[0.9960393,0.0006101787,0.0022056825,0.0008907529,0.00019448323,0.000003806885,0.000024068202,0.0000105791105,0.000021155145],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99712247,0.00028768685,0.0016348538,0.00019876391,0.00055195705,0.00020428836],"domain_scores_gemma":[0.9985204,0.00029292234,0.0005612852,0.00014498082,0.00025934028,0.00022109643],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007958194,0.00014469042,0.0007144713,0.0003062535,0.000027488728,0.000010561265,0.0000650045,0.0001832856,0.000026589347],"category_scores_gemma":[0.0008487631,0.00011051874,0.00021623893,0.00043165506,0.00015024138,0.0004804844,0.00002138763,0.00045669294,0.0000051941734],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024088393,0.0026451512,0.1794939,0.00003635461,0.000034148117,0.00094409223,0.0001184886,0.000030877563,0.81085455,0.00003665322,0.0004029606,0.0029939567],"study_design_scores_gemma":[0.0044091414,0.0027478535,0.47149327,0.0012387062,0.00005205826,0.00020119712,0.00022774565,0.0013788965,0.5159632,0.002148304,0.000038674203,0.00010097212],"about_ca_topic_score_codex":0.000055616158,"about_ca_topic_score_gemma":0.0000021206495,"teacher_disagreement_score":0.2948914,"about_ca_system_score_codex":0.00009494383,"about_ca_system_score_gemma":0.00023246626,"threshold_uncertainty_score":0.45068234},"labels":[],"label_agreement":null},{"id":"W2046919826","doi":"10.1172/jci43350","title":"The poly(A)-binding protein partner Paip2a controls translation during late spermiogenesis in mice","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Occupational Cancer Research Centre; McGill University Health Centre","funders":"Japan Society for the Promotion of Science; Canadian Institutes of Health Research; National Institutes of Health; National Institute of General Medical Sciences; McGill University","keywords":"Spermiogenesis; Messenger RNA; Translation (biology); Biology; Cell biology; Poly(A)-binding protein; Molecular biology; Gene; Genetics; Nucleus","score_opus":0.0956411812667049,"score_gpt":0.3855982795164424,"score_spread":0.2899570982497375,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2046919826","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99003494,0.00022696436,0.00002555922,0.008821716,0.00046404396,0.00032345732,7.515013e-7,0.000007381701,0.00009517975],"genre_scores_gemma":[0.9978676,0.000044611963,0.0009556024,0.00012133599,0.00077303813,0.0000058819837,0.0000019971772,0.000007168944,0.00022277712],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9978582,0.00038422408,0.0012688636,0.0001613321,0.00018418067,0.00014314808],"domain_scores_gemma":[0.9983526,0.0005390437,0.0006131909,0.00016319059,0.00019520661,0.0001367885],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005004677,0.00008563574,0.00033663778,0.00006313505,0.00009482935,0.000015529595,0.0000843229,0.00021049289,0.000014537213],"category_scores_gemma":[0.004512045,0.000051550196,0.00016875243,0.0001289696,0.0003089888,0.0001725581,0.000007874421,0.0008381195,0.000007037685],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024330022,0.00006220499,0.35145354,0.000013873566,0.000039192164,0.000009892439,0.00007997237,0.0000020857312,0.6365255,0.000055486096,0.0000069696175,0.009318242],"study_design_scores_gemma":[0.0017749711,0.00018090791,0.901503,0.00007469641,0.000046921374,0.00003210699,0.000021893558,0.00015122787,0.09391847,0.0018433002,0.00040120116,0.000051287654],"about_ca_topic_score_codex":0.0000067588853,"about_ca_topic_score_gemma":0.000038787275,"teacher_disagreement_score":0.5500495,"about_ca_system_score_codex":0.000018096645,"about_ca_system_score_gemma":0.00015084096,"threshold_uncertainty_score":0.5401665},"labels":[],"label_agreement":null},{"id":"W2047301656","doi":"10.1172/jci37901","title":"Girls homozygous for an IL-2–inducible T cell kinase mutation that leads to protein deficiency develop fatal EBV-associated lymphoproliferation","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":290,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Knut och Alice Wallenbergs Stiftelse; Karolinska Institutet; Stiftelsen för Strategisk Forskning; Ontario Genomics Institute; Ontario Genomics; Genome Canada; Ontario Innovation Trust; Wellcome Trust; GlaxoSmithKline","keywords":"Mutation; Immunology; Biology; Kinase; Medicine; Cancer research; Virology; Genetics; Gene","score_opus":0.07895158821462415,"score_gpt":0.3440478635269209,"score_spread":0.26509627531229674,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2047301656","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98714256,0.0001127509,0.007997511,0.0012475142,0.0026176018,0.0006014896,0.0000060424813,0.00005319505,0.00022134351],"genre_scores_gemma":[0.9947922,0.0000128367265,0.0017994944,0.001595061,0.00019389357,0.00001817869,0.00024536237,0.000015610603,0.0013273159],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973954,0.0005003335,0.0014470007,0.0002723974,0.00012658791,0.00025826288],"domain_scores_gemma":[0.9972812,0.0002330035,0.0012551853,0.0001712221,0.0009544967,0.00010490378],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00223586,0.0001800318,0.00040209937,0.00024314574,0.0002504897,0.00007295347,0.00017615971,0.00041319552,0.000048571554],"category_scores_gemma":[0.0027972052,0.00016040413,0.00018280002,0.00029237938,0.000075596305,0.00083549146,0.000012759613,0.0004273064,0.00010476669],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011213219,0.00075606524,0.0020658807,0.000017571756,0.000037673643,0.0000053242347,0.0006440757,0.00030516012,0.96805084,0.00032494057,0.01121152,0.015459629],"study_design_scores_gemma":[0.004714807,0.00854228,0.0380888,0.00015547176,0.00011969342,0.00013806674,0.00029639085,0.0004692798,0.9414281,0.0015908104,0.0041081584,0.0003480933],"about_ca_topic_score_codex":0.000014251198,"about_ca_topic_score_gemma":0.000014640999,"teacher_disagreement_score":0.03602292,"about_ca_system_score_codex":0.00013984856,"about_ca_system_score_gemma":0.00042393705,"threshold_uncertainty_score":0.65410906},"labels":[],"label_agreement":null},{"id":"W2047893094","doi":"10.1172/jci65642","title":"Coal tar induces AHR-dependent skin barrier repair in atopic dermatitis","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Dermatology and Skin Diseases","field":"Medicine","cited_by":370,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Filaggrin; Aryl hydrocarbon receptor; Atopic dermatitis; Immunology; Cell biology; Cancer research; Chemistry; Biology; Transcription factor; Biochemistry","score_opus":0.05207025210957617,"score_gpt":0.3577454110220966,"score_spread":0.30567515891252045,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2047893094","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9917278,0.00037621253,0.000027804123,0.0066248723,0.000514912,0.00017826789,0.0000019732295,0.000018411074,0.00052970776],"genre_scores_gemma":[0.99177647,0.000112858696,0.0012606472,0.006219824,0.00040820116,0.000006423201,0.0000052178816,0.000008537165,0.00020179735],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9975301,0.00032605042,0.0015498125,0.00012597727,0.00032228336,0.00014577521],"domain_scores_gemma":[0.9982206,0.00044820254,0.0005680414,0.00015229883,0.0002322504,0.00037859433],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00081799814,0.000099501514,0.0004886004,0.0001416432,0.00003271254,0.000015029944,0.000093592724,0.00023334724,0.00037099942],"category_scores_gemma":[0.0028040507,0.00007727456,0.00024010855,0.00010300159,0.00021276226,0.0003896463,0.000023177363,0.0005662216,0.0001005679],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030390414,0.00014998986,0.95405954,0.000049688686,0.000068937356,0.00020723573,0.00017111549,0.000010826045,0.000117198244,0.000069246336,0.04328413,0.0017817253],"study_design_scores_gemma":[0.00181897,0.00015694885,0.986923,0.00024210171,0.00007644291,0.00032648057,0.0001269044,0.00030643525,0.001482219,0.006686788,0.0017789579,0.00007478512],"about_ca_topic_score_codex":0.000039762926,"about_ca_topic_score_gemma":0.000017856077,"teacher_disagreement_score":0.041505173,"about_ca_system_score_codex":0.000034814915,"about_ca_system_score_gemma":0.00033384637,"threshold_uncertainty_score":0.40621835},"labels":[],"label_agreement":null},{"id":"W2047909722","doi":"10.1172/jci38814","title":"Putting a stop to organ trafficking and tourism","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Organ Donation and Transplantation","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Tourism; Poison control; Medicine; Criminology; Medical emergency; Political science; Psychology; Law","score_opus":0.06965413402559062,"score_gpt":0.39211037293692985,"score_spread":0.32245623891133923,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2047909722","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96983325,0.000038539034,0.0019731754,0.02766636,0.000169094,0.00008775109,3.3265832e-7,0.000014348813,0.00021715723],"genre_scores_gemma":[0.97370553,0.000045641384,0.019658454,0.005927916,0.00059015513,1.5421293e-7,0.0000022975314,0.0000053657895,0.00006446778],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9987721,0.00006265282,0.0007744607,0.00008586834,0.00023309918,0.00007183073],"domain_scores_gemma":[0.9989932,0.0001654924,0.00031378662,0.00004991105,0.00019584634,0.0002817725],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010197066,0.00005780146,0.0002312631,0.00012076632,0.000035127934,0.000023354221,0.000030957257,0.0000758525,0.000017790902],"category_scores_gemma":[0.0010942287,0.000047163532,0.0000610743,0.00015104128,0.000029714742,0.00015088696,0.000002674964,0.00025012335,0.0000055763335],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000601506,0.00032977475,0.17492288,0.000091093316,0.000106957305,0.00022673434,0.00417948,0.00012445531,0.04046465,0.0021444391,0.0032233857,0.77358466],"study_design_scores_gemma":[0.002134324,0.0011756931,0.9858558,0.0003095567,0.00012181479,0.000250411,0.000089832676,0.00043630812,0.0054644416,0.0030395126,0.0010577593,0.00006452816],"about_ca_topic_score_codex":8.373322e-7,"about_ca_topic_score_gemma":8.2659e-7,"teacher_disagreement_score":0.81093293,"about_ca_system_score_codex":0.000014678928,"about_ca_system_score_gemma":0.000098082906,"threshold_uncertainty_score":0.1923273},"labels":[],"label_agreement":null},{"id":"W2047975415","doi":"10.1172/jci8185","title":"IL-1α, IL-1β, and IFN-γ mark β cells for Fas-dependent destruction by diabetogenic CD4+ T lymphocytes","year":2000,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Diabetes and associated disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":131,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Medical Research Council Canada; Medical Research Council; Alberta Heritage Foundation for Medical Research; Fondation pour la Recherche Médicale; Canadian Diabetes Association","keywords":"Insulitis; NOD mice; Biology; Cytokine; Cytotoxic T cell; Interleukin 21; T cell; Immunology; Nod; Immune system; Cancer research; Autoimmunity; In vitro; Endocrinology; Diabetes mellitus","score_opus":0.01689404831171086,"score_gpt":0.2885047615161923,"score_spread":0.27161071320448144,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2047975415","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979058,0.00081845996,0.0001422622,0.00043347935,0.00037642493,0.00013596816,0.000058804308,0.0000049953555,0.00012380735],"genre_scores_gemma":[0.9936901,0.0024678523,0.0017057095,0.0008618102,0.00042973252,0.0000063310986,0.000078034565,0.000021502863,0.0007389285],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99849904,0.00012257305,0.00080657174,0.00021223756,0.00016971772,0.00018985609],"domain_scores_gemma":[0.9988964,0.00011669132,0.0005191886,0.00011339913,0.00015146537,0.00020284422],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008677325,0.0001305935,0.00027446376,0.000029290462,0.00007448289,0.000050412462,0.0001175749,0.00026140042,0.000030283454],"category_scores_gemma":[0.000432447,0.000117426905,0.00020585538,0.00005782436,0.00013459957,0.00002140949,0.000019108571,0.00013230932,0.000004908083],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00051398226,0.00027636407,0.034585737,0.00006008623,0.00044420848,0.0000020063724,0.000056244517,0.0003263523,0.6790427,0.000043575277,0.04603139,0.23861735],"study_design_scores_gemma":[0.009552877,0.0037510572,0.029416991,0.00015244818,0.00047715448,0.000027834905,0.00020974659,0.001111127,0.7857123,0.010916636,0.15793379,0.0007380393],"about_ca_topic_score_codex":0.0000068435647,"about_ca_topic_score_gemma":0.0000051121483,"teacher_disagreement_score":0.2378793,"about_ca_system_score_codex":0.00001970534,"about_ca_system_score_gemma":0.00012896956,"threshold_uncertainty_score":0.47885302},"labels":[],"label_agreement":null},{"id":"W2048653810","doi":"10.1172/jci31809","title":"New molecularly targeted therapies for lung cancer","year":2007,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Lung Cancer Treatments and Mutations","field":"Medicine","cited_by":205,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Cancer Institute; Canadian Institutes of Health Research; Gillson Longenbaugh Foundation","keywords":"Lung cancer; Medicine; Disease; Cancer; Targeted therapy; Bioinformatics; Intensive care medicine; Oncology; Pathology; Internal medicine; Biology","score_opus":0.18508919977471613,"score_gpt":0.547475026098917,"score_spread":0.3623858263242008,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2048653810","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00004701981,0.9820136,0.014644179,0.00090041646,0.001337279,0.0009298714,0.000022280716,0.000012017325,0.00009338078],"genre_scores_gemma":[0.0000066328516,0.9666369,0.028396782,0.00072901096,0.0028431779,0.000029774348,0.00008512088,0.00004663774,0.0012259512],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.997043,0.00011259478,0.002165653,0.00018374165,0.00033293487,0.00016208623],"domain_scores_gemma":[0.99607706,0.0006782886,0.0021402924,0.00016385905,0.0005220174,0.00041846826],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00093133247,0.000227979,0.0017602415,0.00020515546,0.00004583168,0.000032176693,0.00010854338,0.00038342475,0.00007396279],"category_scores_gemma":[0.0006268966,0.00014579289,0.0012242313,0.00023465547,0.00006555101,0.0001254449,0.0000068817785,0.0005266029,0.0000024878555],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057278263,0.000054993205,0.00030178472,0.002887414,0.002181711,0.00001910035,0.00008746035,0.000001806909,0.0000017426256,0.00015369384,0.0150915235,0.9791615],"study_design_scores_gemma":[0.0018259715,0.00052171276,0.000254296,0.012769566,0.010313977,0.00004817088,0.000008034649,0.000024429464,0.0000070463425,0.0005824609,0.9735118,0.00013254226],"about_ca_topic_score_codex":0.000024015188,"about_ca_topic_score_gemma":0.0000057333214,"teacher_disagreement_score":0.97902894,"about_ca_system_score_codex":0.00018255126,"about_ca_system_score_gemma":0.003920597,"threshold_uncertainty_score":0.69549704},"labels":[],"label_agreement":null},{"id":"W2049422105","doi":"10.1172/jci64180","title":"Lysosomal disruption preferentially targets acute myeloid leukemia cells and progenitors","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":142,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; BC Cancer Agency; Princess Margaret Cancer Centre; University of Toronto; Ontario Institute for Cancer Research","funders":"National Human Genome Research Institute; Ontario Ministry of Research and Innovation; Terry Fox Foundation; Stem Cell Network; Ontario Ministry of Health and Long-Term Care; Canadian Institutes of Health Research; Leukemia and Lymphoma Society; International Myeloma Foundation","keywords":"Myeloid leukemia; Lysosome; Biology; Progenitor cell; Leukemia; Cancer research; Cell biology; Stem cell; Haematopoiesis; Cathepsin; Vacuole; LAMP1; Immunology; Biochemistry","score_opus":0.05401678840932425,"score_gpt":0.3679316941701927,"score_spread":0.31391490576086845,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049422105","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971987,0.00066246605,0.00030659026,0.00046905124,0.0010440379,0.00017519496,0.0000033749634,0.000016104208,0.00012445865],"genre_scores_gemma":[0.99282694,0.0006413746,0.0031422463,0.00064664945,0.002562057,0.000002646301,0.000012681805,0.000015835585,0.00014958293],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982218,0.00015528871,0.0009950434,0.00010745475,0.00034230461,0.00017809606],"domain_scores_gemma":[0.99825186,0.00013018906,0.0006962906,0.00011572877,0.00018596601,0.00061994046],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00091621745,0.00011799375,0.0003814947,0.000074728116,0.000050525985,0.000021151085,0.000059274294,0.00017884595,0.000060454156],"category_scores_gemma":[0.00024857206,0.000086584056,0.00020195445,0.000082684826,0.00016078104,0.00045966174,0.000019968349,0.0003713264,0.00001904967],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022071665,0.0008037381,0.7547228,0.0001658753,0.0014322333,0.00006134964,0.0010532459,0.000012828181,0.18293513,0.0007749554,0.0041090064,0.051721703],"study_design_scores_gemma":[0.0029557154,0.00097315235,0.8732306,0.00015416447,0.0008882548,0.00012931642,0.000046718396,0.00019009595,0.11653235,0.0018386734,0.0029212385,0.00013973528],"about_ca_topic_score_codex":0.0000018316563,"about_ca_topic_score_gemma":2.9674408e-7,"teacher_disagreement_score":0.118507825,"about_ca_system_score_codex":0.000049397535,"about_ca_system_score_gemma":0.00029475574,"threshold_uncertainty_score":0.35307953},"labels":[],"label_agreement":null},{"id":"W2049606715","doi":"10.1172/jci59334","title":"Alkylpurine–DNA–N-glycosylase confers resistance to temozolomide in xenograft models of glioblastoma multiforme and is associated with poor survival in patients","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":172,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"National Cancer Institute; University of Toronto; Cancer Research UK; Canadian Institutes of Health Research; Cancer Research Society","keywords":"Temozolomide; Methyltransferase; Cancer research; O-6-methylguanine-DNA methyltransferase; DNA repair; DNA methylation; Methylation; Base excision repair; DNA damage; DNA methyltransferase; DNA glycosylase; Biology; Glioma; Chemotherapy; Gene silencing; Medicine; DNA; Gene expression; Gene; Genetics","score_opus":0.07493974418375068,"score_gpt":0.32115138295117873,"score_spread":0.24621163876742805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049606715","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985529,0.00003364845,0.000011439662,0.0008699559,0.00007151649,0.00032719466,0.000012308281,0.0000041845783,0.00011683005],"genre_scores_gemma":[0.99786985,0.000040747673,0.0016141499,0.00041520223,0.000021624403,0.0000058193464,0.000004858298,0.000013274348,0.000014467949],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99771625,0.0001486026,0.0014136274,0.00017209564,0.00038680443,0.00016264255],"domain_scores_gemma":[0.99801666,0.00033878902,0.00080994004,0.000116788666,0.0004122491,0.00030559473],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010203131,0.00013250079,0.0006800112,0.0002801633,0.000014888313,0.0000075219527,0.000062733045,0.00012710656,0.000009675602],"category_scores_gemma":[0.0014063569,0.00009654766,0.000087152046,0.0003104255,0.00013086334,0.0002074445,0.00002029602,0.00023578198,0.0000012893196],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0034335195,0.0012298432,0.99325985,0.000028382234,0.0000988288,0.00009302065,0.00071610656,0.000038349404,0.0001907344,0.00006071794,0.00018429234,0.000666338],"study_design_scores_gemma":[0.011612739,0.0032526692,0.9724598,0.001061665,0.000097201795,0.0000037477948,0.00010284196,0.00037835297,0.0101139555,0.0008080412,0.000017193008,0.0000917749],"about_ca_topic_score_codex":0.00008203226,"about_ca_topic_score_gemma":0.0009906603,"teacher_disagreement_score":0.02080005,"about_ca_system_score_codex":0.000079928286,"about_ca_system_score_gemma":0.00014889988,"threshold_uncertainty_score":0.39370993},"labels":[],"label_agreement":null},{"id":"W2050928426","doi":"10.1172/jci76238","title":"Follicular helper T cell signature in type 1 diabetes","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Diabetes and associated disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":166,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Biotechnology and Biological Sciences Research Council; Medical Research Council; University of Birmingham; Diabetes UK; University College London; Wellcome Trust","keywords":"BCL6; Biology; Immunology; CXCR5; Cellular differentiation; Population; T cell; Interleukin 21; Cell; B cell; Genetics; Immune system; Medicine; Antibody; Germinal center; Gene","score_opus":0.016895670279940014,"score_gpt":0.2930540634438294,"score_spread":0.2761583931638894,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2050928426","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99762994,0.0008208599,0.0000471581,0.0006096295,0.00037941232,0.000038931877,7.2937115e-7,0.0000019392353,0.0004713987],"genre_scores_gemma":[0.9969854,0.00020325712,0.00057538215,0.0016730605,0.0004224465,6.2299455e-7,0.000016849228,0.000009622665,0.000113393704],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99886155,0.00020070405,0.0005698958,0.00011211635,0.00013002363,0.00012570353],"domain_scores_gemma":[0.99917275,0.000075607604,0.00039385897,0.000097569355,0.00015829467,0.00010192893],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012290893,0.00007488989,0.0002079975,0.00003748983,0.000016461816,0.000016237587,0.000117315496,0.00023430772,0.000008918728],"category_scores_gemma":[0.0015022593,0.00006158337,0.00013794827,0.0001050175,0.000054367065,0.0000079633055,0.00002127431,0.00023334588,0.0000058493592],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006916522,0.00025517275,0.64022565,0.000030907853,0.00008359373,0.0000021515384,0.00004328643,0.0010925885,0.32961294,0.00011337116,0.01822251,0.010248647],"study_design_scores_gemma":[0.008288016,0.0055346224,0.36906195,0.00034082992,0.00019594417,0.0000026740179,0.00018325196,0.002692582,0.38005605,0.016962804,0.21583316,0.00084809546],"about_ca_topic_score_codex":0.0000012632778,"about_ca_topic_score_gemma":0.000004549485,"teacher_disagreement_score":0.2711637,"about_ca_system_score_codex":0.0000051990455,"about_ca_system_score_gemma":0.00007348647,"threshold_uncertainty_score":0.2511297},"labels":[],"label_agreement":null},{"id":"W2050988768","doi":"10.1172/jci57734","title":"Calpain mediates pulmonary vascular remodeling in rodent models of pulmonary hypertension, and its inhibition attenuates pathologic features of disease","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Calpain Protease Function and Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":118,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"National Heart, Lung, and Blood Institute; National Institutes of Health; Canadian Institutes of Health Research; University of Virginia; American Heart Association","keywords":"Pulmonary hypertension; Calpain; Pulmonary artery; Medicine; Vascular smooth muscle; Internal medicine; Vascular remodelling in the embryo; Endocrinology; Pharmacology; Cancer research; Biology; Smooth muscle; Biochemistry","score_opus":0.06794584645856784,"score_gpt":0.28705923505474523,"score_spread":0.2191133885961774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2050988768","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99578536,0.0026663723,0.0010083279,0.00024073603,0.00012344345,0.00014328012,0.0000048677753,0.0000027659987,0.000024843299],"genre_scores_gemma":[0.99708086,0.0015122348,0.0010407862,0.00015485249,0.00014458667,0.0000029716684,0.00004097677,0.000009261073,0.000013491974],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9981395,0.00033382865,0.0010448017,0.00017934188,0.00021642177,0.000086098866],"domain_scores_gemma":[0.9985727,0.00006569385,0.0006969128,0.00012036005,0.00039727832,0.00014705528],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016106728,0.00010146015,0.0002879328,0.00010921474,0.000023279496,0.0000036223707,0.000058968908,0.00019670732,0.0000035363516],"category_scores_gemma":[0.0010876738,0.00007952642,0.00015965996,0.00009341763,0.00014138885,0.000032042593,0.00004387384,0.00016443427,2.0141847e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015732622,0.00056860497,0.072482005,0.00021454453,0.00006387961,0.000059534723,0.00015248539,0.007522379,0.9078656,0.00027599398,0.00010448519,0.009117274],"study_design_scores_gemma":[0.0015038648,0.0006951196,0.7224865,0.0006691934,0.00017513397,0.00011824189,0.00021081271,0.078243844,0.16105969,0.03454089,0.000031004813,0.0002657266],"about_ca_topic_score_codex":0.000011782807,"about_ca_topic_score_gemma":0.0000029831658,"teacher_disagreement_score":0.74680585,"about_ca_system_score_codex":0.0000068369022,"about_ca_system_score_gemma":0.00009072516,"threshold_uncertainty_score":0.32429934},"labels":[],"label_agreement":null},{"id":"W2052117565","doi":"10.1172/jci10727","title":"Age and residual cholesterol efflux affect HDL cholesterol levels and coronary artery disease in ABCA1 heterozygotes","year":2000,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cholesterol and Lipid Metabolism","field":"Medicine","cited_by":318,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; Royal Victoria Hospital; Xenon Pharmaceuticals (Canada); McGill University Health Centre; Royal Victoria Regional Health Centre; University of British Columbia","funders":"Medical Research Council; Promotion and Mutual Aid Corporation for Private Schools of Japan; BC Children's Hospital; Medical Research Council Canada; Heart and Stroke Foundation of Canada","keywords":"Tangier disease; ABCA1; Cholesterol; Heterozygote advantage; Internal medicine; Endocrinology; Efflux; Compound heterozygosity; Familial hypercholesterolemia; Biology; ATP Binding Cassette Transporter 1; Coronary artery disease; Residual risk; Medicine; Genetics; Mutation; Genotype; Gene; Transporter","score_opus":0.07301918080886562,"score_gpt":0.3619216805767536,"score_spread":0.288902499767888,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2052117565","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950117,0.0005068887,0.000010214243,0.0037701498,0.00030272323,0.00032082884,0.00000954705,0.000016856224,0.000051111638],"genre_scores_gemma":[0.9932704,0.0004958967,0.0004510399,0.0041156006,0.0013204908,0.0000052412624,0.000012209868,0.000026576974,0.00030257486],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99699014,0.0004528873,0.001569572,0.00032360252,0.00042032043,0.00024347276],"domain_scores_gemma":[0.9978601,0.00052010163,0.00043972433,0.00023954407,0.00008233226,0.00085823506],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016620712,0.00023589922,0.00082962867,0.00019686685,0.00005205419,0.000083050996,0.0000961872,0.00020327921,0.000045313373],"category_scores_gemma":[0.00074778474,0.0001865578,0.00015133897,0.00012962586,0.00044517196,0.000544618,0.00003663256,0.0007995331,0.000012862712],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00086189416,0.00024556275,0.9251511,0.00014169233,0.00006945309,0.00031301478,0.0004371602,0.00002555798,0.0016363508,0.000008940053,0.00029939975,0.07080984],"study_design_scores_gemma":[0.00724719,0.000752821,0.9879886,0.00084695104,0.00021539304,0.00045975202,0.000021718794,0.00019300809,0.00016228521,0.0007058733,0.0012522821,0.0001541192],"about_ca_topic_score_codex":0.000011600677,"about_ca_topic_score_gemma":0.000020350366,"teacher_disagreement_score":0.07065572,"about_ca_system_score_codex":0.00002336376,"about_ca_system_score_gemma":0.0001336466,"threshold_uncertainty_score":0.7607606},"labels":[],"label_agreement":null},{"id":"W2052350491","doi":"10.1172/jci28310","title":"Hematopoietic stem cells proliferate until after birth and show a reversible phase-specific engraftment defect","year":2006,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Hematopoietic Stem Cell Transplantation","field":"Medicine","cited_by":377,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"National Heart, Lung, and Blood Institute; Canadian Institutes of Health Research; Terry Fox Foundation; National Cancer Institute; National Institutes of Health; Michael Smith Health Research BC; Stem Cell Network","keywords":"Haematopoiesis; Stromal cell; Stem cell; CXC chemokine receptors; Cell biology; Biology; Cell cycle; Stem cell factor; Chemokine; Hematopoietic stem cell; Stromal cell-derived factor 1; Immunology; Cancer research; CXCR4; Cell; Chemokine receptor; Immune system; Genetics","score_opus":0.054878085575127154,"score_gpt":0.32831870119348433,"score_spread":0.2734406156183572,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2052350491","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99516046,0.00090371986,0.0017331468,0.0011340028,0.00038778034,0.00043000624,0.0000071858813,0.000023195214,0.00022050727],"genre_scores_gemma":[0.9931327,0.00046229755,0.004909392,0.0004699526,0.00053718215,0.0000098394885,0.0000076687875,0.000026003416,0.0004449803],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99700254,0.00025508963,0.0017578885,0.00024628825,0.0005346036,0.00020360351],"domain_scores_gemma":[0.99801546,0.0004375364,0.0007358841,0.00018756962,0.0002894312,0.00033408662],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017160652,0.00018597435,0.0006472506,0.00017111583,0.000049735416,0.00005520322,0.00006481599,0.00018566927,0.000080519436],"category_scores_gemma":[0.000049152706,0.00014568075,0.00028289537,0.0002130766,0.00018570578,0.00021287946,0.000011924049,0.0004085811,0.000032861823],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010441917,0.0044354014,0.72029936,0.005299781,0.0010232227,0.0026666655,0.003317877,0.00025190937,0.20940892,0.002948801,0.02248001,0.01742611],"study_design_scores_gemma":[0.05028382,0.008845422,0.20275845,0.006556919,0.0026187066,0.003561266,0.0006608237,0.0021315722,0.68280995,0.010706121,0.027909,0.001157949],"about_ca_topic_score_codex":0.0000039673937,"about_ca_topic_score_gemma":0.0000029537505,"teacher_disagreement_score":0.51754093,"about_ca_system_score_codex":0.00005401987,"about_ca_system_score_gemma":0.00020801292,"threshold_uncertainty_score":0.5940688},"labels":[],"label_agreement":null},{"id":"W2052493267","doi":"10.1172/jci11902","title":"Bonzo/CXCR6 expression defines type 1–polarized T-cell subsets with extralymphoid tissue homing potential","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":358,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; York University; Leukemia and Lymphoma Society; National Institute of Allergy and Infectious Diseases; U.S. Department of Veterans Affairs","keywords":"Cytotoxic T cell; Interleukin 21; Natural killer T cell; Cell biology; IL-2 receptor; CD40; CXCL16; CCL5; ZAP70; Antigen-presenting cell; Granzyme B; Homing (biology); T cell; CXCR3; Biology; Granzyme; C-C chemokine receptor type 7; Interleukin 12; CD28; Priming (agriculture); CD8; Chemokine receptor; Chemokine; Immunology; Inflammation; Immune system; Perforin; In vitro","score_opus":0.038766747480512585,"score_gpt":0.3046622840009077,"score_spread":0.26589553652039516,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2052493267","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99152803,0.0029654768,0.0012116705,0.00082771527,0.0029597883,0.00013416227,0.0000023426528,0.000034474007,0.00033635137],"genre_scores_gemma":[0.992591,0.0007093819,0.002578676,0.0003899645,0.0003535707,0.00000195473,0.000042912656,0.00002597794,0.0033065118],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99717355,0.00063233956,0.0014650765,0.0002710555,0.00011391678,0.00034406447],"domain_scores_gemma":[0.9975163,0.0004033159,0.0013323548,0.00025517712,0.00039026738,0.00010263736],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010694001,0.00023191475,0.00067076046,0.00016034431,0.00019150428,0.000034575063,0.00031241134,0.00058278465,0.0003955931],"category_scores_gemma":[0.00046377987,0.00016338208,0.00018119632,0.00022731019,0.00048827232,0.00033031288,0.000059801707,0.00082819164,0.0002570081],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016048519,0.00026749753,0.020314429,0.000012512976,0.000095413954,0.00008844339,0.00008994607,0.00002245594,0.9716666,0.000035332865,0.0030783303,0.002724219],"study_design_scores_gemma":[0.009155746,0.002275136,0.009675101,0.00021755304,0.00027659233,0.0017109042,0.00015451226,0.000025401174,0.93422663,0.0010950243,0.04083212,0.00035527634],"about_ca_topic_score_codex":0.00003821667,"about_ca_topic_score_gemma":0.0000103301145,"teacher_disagreement_score":0.03775379,"about_ca_system_score_codex":0.000028011362,"about_ca_system_score_gemma":0.0002948315,"threshold_uncertainty_score":0.6662528},"labels":[],"label_agreement":null},{"id":"W2052554962","doi":"10.1172/jci28549","title":"Monocyte subsets differentially employ CCR2, CCR5, and CX3CR1 to accumulate within atherosclerotic plaques","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Chemokine receptors and signaling","field":"Medicine","cited_by":1305,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Deutsche Forschungsgemeinschaft","keywords":"CCR2; CX3CR1; Monocyte; Chemokine receptor; Chemokine; CC chemokine receptors; Immunology; CD11c; Biology; Inflammation; Phenotype; Gene; Biochemistry","score_opus":0.12593836580196016,"score_gpt":0.41590416755424525,"score_spread":0.2899658017522851,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2052554962","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945493,0.00014047192,0.0028529663,0.001648398,0.0005202804,0.00018995708,8.1996194e-7,0.000020127092,0.00007771981],"genre_scores_gemma":[0.98771685,0.0001080431,0.0094963815,0.0013743895,0.0011279263,6.8547945e-7,0.0000036597476,0.00002356972,0.00014848784],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99736905,0.00009663882,0.0017337877,0.00018569929,0.00042067983,0.00019413875],"domain_scores_gemma":[0.9976066,0.0005304112,0.00073061825,0.00013700608,0.00029441738,0.00070098834],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0028284553,0.00015260796,0.0006081643,0.00014609571,0.000055223023,0.0000485153,0.000087915156,0.00018799516,0.0000409872],"category_scores_gemma":[0.0018835003,0.00011341979,0.00018902714,0.00016207271,0.00011697737,0.00016383067,0.000036170764,0.0005190713,0.000011056829],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019084899,0.0003695405,0.8228124,0.00013558731,0.00029818478,0.0000897505,0.0019282982,0.00013142073,0.13973287,0.0003125407,0.0013966161,0.030884339],"study_design_scores_gemma":[0.0040811063,0.0016158291,0.8986024,0.0010146991,0.0003073571,0.00013211407,0.00013247583,0.00088593987,0.08914413,0.0029067944,0.0009431474,0.00023400004],"about_ca_topic_score_codex":0.000009337945,"about_ca_topic_score_gemma":0.00001752862,"teacher_disagreement_score":0.07579003,"about_ca_system_score_codex":0.000044400946,"about_ca_system_score_gemma":0.00013594572,"threshold_uncertainty_score":0.46251246},"labels":[],"label_agreement":null},{"id":"W2053098204","doi":"10.1172/jci42142","title":"Retinopathy of prematurity: understanding ischemic retinal vasculopathies at an extreme of life","year":2010,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Retinopathy of Prematurity Studies","field":"Medicine","cited_by":275,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Maisonneuve-Rosemont; Montreal Children's Hospital; Centre Hospitalier Universitaire Sainte-Justine","funders":"Canadian Institutes of Health Research; Canadian Stroke Network; Canadian Child Health Clinician Scientist Program; Charles A. King Trust; Health Sciences Centre Foundation; Heart and Stroke Foundation of Canada","keywords":"Retinopathy of prematurity; Medicine; Neovascularization; Retinal; Retinopathy; Retinal detachment; Retina; Pathogenesis; Ophthalmology; Macular degeneration; Ischemia; Hypoxia (environmental); Retinal Disorder; Pathology; Angiogenesis; Neuroscience; Internal medicine; Biology; Pregnancy; Endocrinology; Gestational age","score_opus":0.346324176527859,"score_gpt":0.43272537660193033,"score_spread":0.08640120007407132,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2053098204","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0743267,0.92239916,0.000057092275,0.00042916092,0.0012544416,0.00077526754,0.000023327731,0.000025125111,0.0007097448],"genre_scores_gemma":[0.0069129677,0.9827607,0.008397394,0.00008163109,0.0016212822,0.000005944212,0.00004271891,0.000078643934,0.000098672],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.9892383,0.0011577086,0.0073553524,0.0004657003,0.0014800786,0.00030281814],"domain_scores_gemma":[0.98304325,0.002183511,0.012223031,0.00077991333,0.001079017,0.000691268],"candidate_categories":["metaresearch","metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.008776303,0.00053955277,0.0063683526,0.0005027839,0.00009249591,0.000023155939,0.0004789103,0.0013554371,0.000047897367],"category_scores_gemma":[0.0220349,0.00039844768,0.0021305215,0.00041585843,0.0013946188,0.00030772772,0.0001666368,0.0031181732,0.0000060097855],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0054529575,0.0037948692,0.080300026,0.4504626,0.0077365017,0.00058768224,0.007847779,0.0000042543534,0.00506035,0.0027173902,0.023642737,0.41239285],"study_design_scores_gemma":[0.00952897,0.0124337245,0.013318009,0.41157588,0.034616657,0.004448465,0.002205662,0.0001312871,0.002342828,0.00895185,0.49805453,0.0023921365],"about_ca_topic_score_codex":0.000004598701,"about_ca_topic_score_gemma":0.000009253961,"teacher_disagreement_score":0.4744118,"about_ca_system_score_codex":0.00020578594,"about_ca_system_score_gemma":0.0016185988,"threshold_uncertainty_score":0.999941},"labels":[],"label_agreement":null},{"id":"W2053441895","doi":"10.1172/jci25052","title":"TAT-mediated intracellular delivery of purine nucleoside phosphorylase corrects its deficiency in mice","year":2006,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Biochemical and Molecular Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":75,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Purine nucleoside phosphorylase; Intracellular; Purine; In vivo; Purine metabolism; Immune system; Ex vivo; Enzyme; Nucleoside; Biology; Pharmacology; Chemistry; Immunology; Biochemistry","score_opus":0.02774581565182042,"score_gpt":0.31336724389080267,"score_spread":0.28562142823898223,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2053441895","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956653,0.0033499459,0.00018455363,0.00030018503,0.00016225464,0.00010580058,0.000005600303,0.0000024634262,0.00022390486],"genre_scores_gemma":[0.9980518,0.00042766685,0.0009853122,0.00012733533,0.00021766491,0.0000017750484,0.00004143426,0.000012347757,0.00013462262],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979237,0.00020307703,0.001188116,0.00018845098,0.0003053244,0.00019137445],"domain_scores_gemma":[0.9986288,0.00011725835,0.00056473765,0.0001254205,0.00040667073,0.00015712211],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012366965,0.000108634435,0.00028152164,0.000083296305,0.000018941406,0.000011284088,0.00021173118,0.00024737924,0.000013466731],"category_scores_gemma":[0.0016943595,0.00009492984,0.00016989672,0.00021151609,0.00021486628,0.000011245714,0.00006596847,0.00034467725,0.000006741078],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024635304,0.00026602697,0.0101118125,0.000033704477,0.000014433166,0.000030592266,0.000010080607,0.00012259866,0.9859901,0.000052459527,0.0021022717,0.0010195564],"study_design_scores_gemma":[0.0011786005,0.0005646467,0.017542684,0.000075195334,0.00001921908,0.000020882992,0.00001634642,0.00039131343,0.97762877,0.00043722635,0.0020181322,0.00010697304],"about_ca_topic_score_codex":0.000038428734,"about_ca_topic_score_gemma":0.000030094187,"teacher_disagreement_score":0.00836133,"about_ca_system_score_codex":0.000013759568,"about_ca_system_score_gemma":0.00025456338,"threshold_uncertainty_score":0.38711268},"labels":[],"label_agreement":null},{"id":"W2053530470","doi":"10.1172/jci9147","title":"Suppressed smooth muscle proliferation and inflammatory cell invasion after arterial injury in elafin-overexpressing mice","year":2000,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Fatty Acid Research and Health","field":"Nursing","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; SickKids Foundation; University Health Network; Hospital for Sick Children","funders":"Medical Research Council; Medical Research Council Canada; Heart and Stroke Foundation of Canada","keywords":"Elafin; Cell growth; Inflammation; Cell injury; Cell biology; Cancer research; Myocyte; Medicine; Biology; Chemistry; Internal medicine; Immunology; Apoptosis; Biochemistry","score_opus":0.04240796166594906,"score_gpt":0.3488913828416235,"score_spread":0.30648342117567445,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2053530470","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99681175,0.00011185694,0.000039708226,0.0021193034,0.0005034495,0.00024236424,0.000003984607,0.0000108799595,0.00015672734],"genre_scores_gemma":[0.9943498,0.00016203805,0.0032176727,0.0012442672,0.0009791751,0.0000037058417,0.000006123655,0.000017086242,0.000020146825],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.996888,0.0007620824,0.0014841171,0.00019885311,0.00041409326,0.00025289622],"domain_scores_gemma":[0.99854916,0.00034778615,0.00049037946,0.00013193573,0.00013341835,0.0003473343],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022276395,0.00012476722,0.00033829975,0.00017134241,0.00008924059,0.000122027624,0.00010879193,0.00023772859,0.00014357355],"category_scores_gemma":[0.00072890456,0.00010926168,0.00008116942,0.0001332166,0.00019505044,0.0008869561,0.000019978774,0.00079047045,0.000016671253],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.016118463,0.0005386098,0.20582917,0.0005767926,0.000017960843,0.000079672835,0.0029830905,0.00023126169,0.5668741,0.000022615674,0.0052550673,0.20147319],"study_design_scores_gemma":[0.0041342806,0.0011284534,0.9148424,0.00077874545,0.000025198246,0.000009978117,0.000054666933,0.0029859697,0.0689047,0.00375107,0.0031860678,0.00019845925],"about_ca_topic_score_codex":0.000025961172,"about_ca_topic_score_gemma":0.000044597025,"teacher_disagreement_score":0.7090132,"about_ca_system_score_codex":0.00006399444,"about_ca_system_score_gemma":0.0002354175,"threshold_uncertainty_score":0.4455562},"labels":[],"label_agreement":null},{"id":"W2054256748","doi":"10.1172/jci69296","title":"Where hypertension happens","year":2013,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Blood Pressure and Hypertension Studies","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute; McGill University","funders":"Canadian Institutes of Health Research","keywords":"Medicine; Renin–angiotensin system; Mechanism (biology); Essential hypertension; Pathophysiology of hypertension; Intensive care medicine; Bioinformatics; Internal medicine; Blood pressure; Biology; Philosophy; Epistemology","score_opus":0.1735329966809813,"score_gpt":0.368624125692274,"score_spread":0.1950911290112927,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2054256748","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.013957588,0.009146659,0.000015437268,0.97271514,0.0024201805,0.0002677545,0.0000036124384,0.000026616834,0.0014469887],"genre_scores_gemma":[0.0025940028,0.003195844,0.003317199,0.96258414,0.022690715,0.0000032205648,0.000033752014,0.00005449337,0.0055266437],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9958213,0.00031089783,0.002455563,0.00027133067,0.0009006013,0.00024029143],"domain_scores_gemma":[0.9942269,0.0010799791,0.0020641608,0.00037218066,0.0019786533,0.00027812616],"candidate_categories":["research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.0011403331,0.00028334663,0.0021324672,0.00019764197,0.00007197766,0.00004364145,0.00016277455,0.0014271808,0.00024149234],"category_scores_gemma":[0.0018464172,0.0001849022,0.00076585106,0.00012583863,0.00031350268,0.0001929218,0.000064362765,0.004346871,0.00027143417],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051971165,0.00005539729,0.0033197606,0.00024890283,0.0007506358,0.0011406607,0.00002665609,3.746243e-7,0.00019505083,0.000006520422,0.99115974,0.0030443214],"study_design_scores_gemma":[0.0014620986,0.00075619516,0.00974452,0.0017890173,0.0031776512,0.0012335732,0.000022130427,0.000043574055,0.000080697246,0.0007455794,0.9807634,0.00018159515],"about_ca_topic_score_codex":0.000018743898,"about_ca_topic_score_gemma":0.0000019717475,"teacher_disagreement_score":0.020270536,"about_ca_system_score_codex":0.0000127477815,"about_ca_system_score_gemma":0.00041395926,"threshold_uncertainty_score":0.99986917},"labels":[],"label_agreement":null},{"id":"W2055166353","doi":"10.1172/jci10763","title":"Functional human T-cell immunity and osteoprotegerin ligand control alveolar bone destruction in periodontal infection","year":2000,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Oral microbiology and periodontitis research","field":"Dentistry","cited_by":494,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Ontario Institute for Cancer Research; Amgen (Canada); Toronto General Hospital; Western University","funders":"National Institute of Dental and Craniofacial Research; Medical Research Council; National Institutes of Health; London Health Sciences Centre; Amgen","keywords":"Osteoprotegerin; Osteoclast; Periodontitis; Dental alveolus; Immunology; Bone resorption; Medicine; Porphyromonas gingivalis; Immune system; RANKL; Bone remodeling; Receptor; Internal medicine; Dentistry; Activator (genetics)","score_opus":0.05223104631802851,"score_gpt":0.3522658271844794,"score_spread":0.3000347808664509,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2055166353","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985748,0.00025102965,0.00006691976,0.00025425164,0.0004420112,0.00016437424,0.0000069764114,0.00001091405,0.00022873133],"genre_scores_gemma":[0.99846846,0.0001634742,0.00023323155,0.00012168652,0.0004722772,0.0000039279535,0.000019295168,0.000010374859,0.0005072561],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99750596,0.00072714285,0.0012337646,0.00017105907,0.00019527214,0.00016679784],"domain_scores_gemma":[0.9989158,0.00020565778,0.00043845997,0.00011012569,0.00017483259,0.00015511466],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023152656,0.000121176956,0.00040476504,0.00015760679,0.00018737726,0.00007935079,0.00007335196,0.0003307551,0.00074011984],"category_scores_gemma":[0.0003016208,0.00011136462,0.00015356367,0.0001607229,0.00037431644,0.0005370622,0.000018907265,0.001116189,0.00006421761],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00057011994,0.00013715768,0.86289483,0.000029868315,0.000030222254,0.000047957274,0.00007063993,0.000055912395,0.12741745,0.000034700166,0.00034258392,0.008368552],"study_design_scores_gemma":[0.0037186034,0.0006128622,0.98561376,0.00007012672,0.000027115928,0.0005735264,0.000025142052,0.00006931965,0.0069549237,0.0009970709,0.0012297818,0.00010774908],"about_ca_topic_score_codex":0.0004096542,"about_ca_topic_score_gemma":0.000571534,"teacher_disagreement_score":0.12271893,"about_ca_system_score_codex":0.000050325118,"about_ca_system_score_gemma":0.00011615339,"threshold_uncertainty_score":0.8103793},"labels":[],"label_agreement":null},{"id":"W2055785133","doi":"10.1172/jci15912","title":"Lack of prolactin receptor signaling in mice results in lactotroph proliferation and prolactinomas by dopamine-dependent and -independent mechanisms","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Growth Hormone and Insulin-like Growth Factors","field":"Medicine","cited_by":106,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute on Drug Abuse; National Institutes of Health; National Eye Institute; Institut National de la Santé et de la Recherche Médicale","keywords":"Prolactin; Prolactin cell; Prolactinoma; Endocrinology; Internal medicine; Dopamine; Dopamine receptor; Signal transduction; Receptor; Biology; Neuroscience; Cell biology; Medicine; Hormone","score_opus":0.08281571445697379,"score_gpt":0.3309611466416061,"score_spread":0.2481454321846323,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2055785133","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99529594,0.0004191858,0.00008043948,0.003446625,0.0001539705,0.0004982554,0.0000059101817,0.000007730871,0.00009193575],"genre_scores_gemma":[0.9960778,0.00046496547,0.0028486438,0.00033391637,0.00015332723,0.000005977449,0.000009251387,0.000017944536,0.000088188186],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9961293,0.0003402434,0.0025493267,0.0002768662,0.0005139697,0.00019032923],"domain_scores_gemma":[0.99751353,0.00044163503,0.0014117816,0.00010917259,0.0002539167,0.00026999027],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0028356484,0.00017264632,0.0006829716,0.00029992883,0.000027684973,0.000028938539,0.00006986544,0.0002807757,0.000012625721],"category_scores_gemma":[0.002850926,0.00014224909,0.00007521386,0.00025631278,0.00010260512,0.00045390075,0.000028070397,0.00082968845,0.0000024231779],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0056141843,0.0010660293,0.3856019,0.00032493364,0.000084422536,0.00006670879,0.0018786,0.000033462507,0.5974568,0.00014900794,0.00077023084,0.0069536995],"study_design_scores_gemma":[0.027030395,0.00803752,0.58530515,0.0014481387,0.00024642827,0.00027352117,0.0009628989,0.006225461,0.36677083,0.0028789868,0.00031041776,0.0005102466],"about_ca_topic_score_codex":0.00002733656,"about_ca_topic_score_gemma":0.000015501893,"teacher_disagreement_score":0.23068598,"about_ca_system_score_codex":0.00007129998,"about_ca_system_score_gemma":0.00010253859,"threshold_uncertainty_score":0.58007497},"labels":[],"label_agreement":null},{"id":"W2056110140","doi":"10.1172/jci33673","title":"VEGF-B inhibits apoptosis via VEGFR-1–mediated suppression of the expression of BH3-only protein genes in mice and rats","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Angiogenesis and VEGF in Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":194,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"National Eye Institute; National Institute on Aging; National Institutes of Health; American Health Assistance Foundation; University of North Texas; School of Medicine, Boston University; Glaucoma Research Foundation","keywords":"Apoptosis; Biology; Gene; Bcl-2 family; Cell biology; Gene expression; Cancer research; Programmed cell death; Molecular biology; Genetics","score_opus":0.04201217221208846,"score_gpt":0.31926473139286765,"score_spread":0.2772525591807792,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2056110140","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99800724,0.001338715,0.000098144934,0.00025028255,0.00015159647,0.00013212416,0.000004492143,9.918365e-7,0.00001642006],"genre_scores_gemma":[0.9976811,0.00091145036,0.0010496479,0.00011220656,0.00019646359,0.0000029166583,0.0000059868134,0.0000091081565,0.000031142186],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99828225,0.00026677968,0.0010105132,0.00013581349,0.00021694848,0.00008770041],"domain_scores_gemma":[0.99846905,0.000073628056,0.0010127162,0.00013446674,0.00022920262,0.00008095419],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000643671,0.00009100269,0.00027830925,0.00004536591,0.000035241566,0.0000030659112,0.00013843203,0.00021541814,0.0000041111166],"category_scores_gemma":[0.00062353717,0.00005936806,0.00014712292,0.00011656593,0.00028636688,0.000014354254,0.00007436342,0.00014096081,2.4085912e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016586742,0.00006627733,0.115959,0.000032249376,0.000012457117,4.1144767e-7,0.000059005044,0.000030501766,0.8821905,0.0000025551353,0.00030411873,0.0011770371],"study_design_scores_gemma":[0.0006550954,0.00028635832,0.07870829,0.00031782273,0.000014592174,0.000011715449,0.00002074661,0.000041784657,0.91947883,0.00009862248,0.00030708686,0.000059031165],"about_ca_topic_score_codex":0.000012185823,"about_ca_topic_score_gemma":0.00000546586,"teacher_disagreement_score":0.03728834,"about_ca_system_score_codex":0.000006224638,"about_ca_system_score_gemma":0.0002215152,"threshold_uncertainty_score":0.24209592},"labels":[],"label_agreement":null},{"id":"W2057046598","doi":"10.1172/jci46315","title":"Recent advances in the molecular pathophysiology of atrial fibrillation","year":2011,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Atrial Fibrillation Management and Outcomes","field":"Medicine","cited_by":544,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Heart Institute","funders":"Bundesministerium für Bildung und Forschung; Deutsche Forschungsgemeinschaft; Institut de Cardiologie de Montréal; European Commission; Canadian Institutes of Health Research; Mitacs; Heart and Stroke Foundation of Canada","keywords":"Atrial fibrillation; Medicine; Disease; Reentry; Cardiac arrhythmia; Cardiology; Internal medicine; Pathophysiology; Bioinformatics; Intensive care medicine; Neuroscience; Psychology; Biology","score_opus":0.27283598202317294,"score_gpt":0.4850792628019158,"score_spread":0.21224328077874288,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057046598","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0013224896,0.99649316,0.000056257348,0.0004893986,0.0008315414,0.00055898895,0.0000017802531,0.000003598392,0.00024278379],"genre_scores_gemma":[0.000099929384,0.9957034,0.0008308785,0.00013210495,0.0031684274,4.369327e-7,0.00003027573,0.000013902004,0.000020642823],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9950234,0.0010906953,0.003302156,0.00014653378,0.00033593393,0.00010125131],"domain_scores_gemma":[0.9941209,0.0013254288,0.004016453,0.00021591593,0.00024800873,0.000073300616],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029916272,0.00016967893,0.0019483702,0.00024594594,0.000015650365,0.000007387564,0.00015791517,0.000315828,0.00003481922],"category_scores_gemma":[0.0040979646,0.000095291536,0.0013627177,0.0004057509,0.00013982666,0.00015822741,0.000027713748,0.00046910185,0.000007684478],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014894766,0.0000045555403,0.0020577405,0.0013210381,0.00010505221,0.000010377076,0.000037627455,0.000028387842,0.0000010896364,0.0011045396,0.00008982362,0.99509084],"study_design_scores_gemma":[0.00080861076,0.0005594089,0.0016170343,0.0031514668,0.0012875628,0.000016518015,0.000012997697,0.000012357951,0.0000014124435,0.005787898,0.98666435,0.00008038514],"about_ca_topic_score_codex":9.998153e-7,"about_ca_topic_score_gemma":7.956015e-7,"teacher_disagreement_score":0.99501044,"about_ca_system_score_codex":0.000029148578,"about_ca_system_score_gemma":0.0003664047,"threshold_uncertainty_score":0.49059424},"labels":[],"label_agreement":null},{"id":"W2057218469","doi":"10.1172/jci67227","title":"AMPK, insulin resistance, and the metabolic syndrome","year":2013,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Metabolism, Diabetes, and Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":867,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Nutrition, Metabolism and Diabetes; Université de Montréal","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; Medical Research Council; Canadian Institutes of Health Research; National Institutes of Health","keywords":"AMPK; Insulin resistance; Hyperinsulinemia; Metabolic syndrome; Dyslipidemia; Medicine; Endocrinology; Type 2 diabetes; Internal medicine; Diabetes mellitus; Protein kinase A; AMP-activated protein kinase; Insulin; Bioinformatics; Biology; Kinase; Genetics","score_opus":0.08040403835330859,"score_gpt":0.3820727877537857,"score_spread":0.30166874940047717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057218469","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.003038287,0.99550354,0.000025295234,0.000080290156,0.0008581597,0.00033460016,0.00001124441,0.000002541809,0.00014602281],"genre_scores_gemma":[0.00007628404,0.99630433,0.0006699884,0.0005683627,0.0017890964,0.000028848466,0.000029727289,0.000030973108,0.0005023658],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99613035,0.0010573972,0.0021159092,0.0002566114,0.000273494,0.00016622635],"domain_scores_gemma":[0.996408,0.0003164016,0.0024376514,0.00034997333,0.00026666702,0.00022134937],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003025007,0.0002568413,0.0019053066,0.00007077933,0.000060108316,0.00007096818,0.00036553715,0.00050115975,0.000023873718],"category_scores_gemma":[0.0021180392,0.00014146949,0.0007372487,0.00014975666,0.00062194106,0.000013364195,0.00008084779,0.00063850806,0.000014809663],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003439226,0.00002210579,0.000014090638,0.00069608213,0.00039406415,0.0000026500486,0.000010464678,4.110576e-7,0.0000018868258,0.0006957354,0.0076329145,0.9904952],"study_design_scores_gemma":[0.0009852377,0.00008554644,0.00009489357,0.0012886352,0.000961886,0.000049882772,0.00000509515,0.0000011503537,0.000012087099,0.0018415685,0.99451697,0.00015706668],"about_ca_topic_score_codex":0.000002965704,"about_ca_topic_score_gemma":0.00000496995,"teacher_disagreement_score":0.99033815,"about_ca_system_score_codex":0.0000067293313,"about_ca_system_score_gemma":0.0005202338,"threshold_uncertainty_score":0.57689583},"labels":[],"label_agreement":null},{"id":"W2057419293","doi":"10.1172/jci66746","title":"Better tools for assessing osteoporosis","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Bone health and osteoporosis research","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Nutrition, Metabolism and Diabetes","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases","keywords":"Osteoporosis; Quantitative computed tomography; Dual energy; Medicine; Skeleton (computer programming); Dual-energy X-ray absorptiometry; Osteoporotic fracture; Axial skeleton; Radiology; Nuclear medicine; Bone density; Bone mineral; Internal medicine; Anatomy","score_opus":0.2712895652214182,"score_gpt":0.5006644507778752,"score_spread":0.22937488555645702,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057419293","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98254263,0.00031484288,0.0006807816,0.015036783,0.0008556202,0.0002776441,0.0000019501697,0.000008658114,0.00028106253],"genre_scores_gemma":[0.9350358,0.00007197772,0.053599615,0.0074877758,0.0036401663,0.000007499583,0.000012472531,0.000016972088,0.00012769717],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99745774,0.00017940438,0.0015187844,0.0000898696,0.00045034837,0.00030382202],"domain_scores_gemma":[0.99575615,0.0018846752,0.0007614253,0.00013508012,0.00060279993,0.00085985975],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.005527983,0.000082140024,0.0004718514,0.000102002516,0.00007415046,0.00006414087,0.00006654009,0.00019197333,0.000055870547],"category_scores_gemma":[0.009985264,0.000060016497,0.00028436928,0.00013199737,0.00012224968,0.0010309683,0.000015076128,0.0005360521,0.00001802011],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003284971,0.00023526163,0.74166286,0.00021687442,0.00004901989,0.0000033579147,0.00017254442,8.770599e-7,0.004362506,0.00010627431,0.017319547,0.23554242],"study_design_scores_gemma":[0.0026009565,0.00070147985,0.9597247,0.0002606178,0.00013330029,0.00007707291,0.00017476639,0.00011622225,0.00426956,0.00082048227,0.03104415,0.00007666178],"about_ca_topic_score_codex":0.0000029161636,"about_ca_topic_score_gemma":6.768532e-7,"teacher_disagreement_score":0.23546575,"about_ca_system_score_codex":0.000048835278,"about_ca_system_score_gemma":0.0005025655,"threshold_uncertainty_score":0.9983541},"labels":[],"label_agreement":null},{"id":"W2057994513","doi":"10.1172/jci41407","title":"GSK-3α directly regulates β-adrenergic signaling and the response of the heart to hemodynamic stress in mice","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cardiac electrophysiology and arrhythmias","field":"Medicine","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; McMaster University","funders":"National Heart, Lung, and Blood Institute; Canadian Institutes of Health Research; National Institutes of Health; British Heart Foundation","keywords":"Adrenergic; GSK-3; Muscle hypertrophy; Internal medicine; Endocrinology; Medicine; GSK3B; Glycogen synthase; Phosphorylation; Heart failure; Glycogen; Biology; Cell biology; Receptor","score_opus":0.019575994039745654,"score_gpt":0.32572500315561437,"score_spread":0.30614900911586873,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057994513","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98374844,0.00013146554,0.0000060105435,0.015587557,0.00035067598,0.00015133922,0.0000012259143,0.0000030203425,0.000020258287],"genre_scores_gemma":[0.99744225,0.00002681852,0.0007138777,0.0013715598,0.0003770235,0.0000017438074,5.9814346e-7,0.0000066968687,0.00005941315],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9980298,0.00075132935,0.0008308882,0.000103333325,0.00018424052,0.00010039225],"domain_scores_gemma":[0.99679816,0.002348086,0.00042847588,0.00016103499,0.00015742374,0.000106837586],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0036036954,0.00007413246,0.0004424291,0.00006900127,0.000046779005,0.000007989165,0.00008313095,0.00012754017,0.00000525591],"category_scores_gemma":[0.005368943,0.0000384139,0.00020526338,0.00020238121,0.0005022897,0.00005602407,0.000032360695,0.00075348536,8.136258e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0065072556,0.00004886335,0.043017797,0.000019643456,0.00005238,0.000013710559,0.00032020858,0.0009943735,0.94780755,0.00041168922,0.00013672211,0.000669833],"study_design_scores_gemma":[0.0025265773,0.00041218437,0.80528873,0.0003304126,0.00010682783,0.0002337939,0.000053030646,0.0012423871,0.18465759,0.005020049,0.00006987103,0.000058555383],"about_ca_topic_score_codex":0.00001889794,"about_ca_topic_score_gemma":0.00002886983,"teacher_disagreement_score":0.7631499,"about_ca_system_score_codex":0.000010741606,"about_ca_system_score_gemma":0.00020681595,"threshold_uncertainty_score":0.6427514},"labels":[],"label_agreement":null},{"id":"W2058086184","doi":"10.1172/jci38832","title":"Disruptive insights in psychiatry: transforming a clinical discipline","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Schizophrenia research and treatment","field":"Medicine","cited_by":166,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Schizophrenia (object-oriented programming); Psychiatry; Bipolar disorder; Depression (economics); Medicine; Mental illness; Psychology; Mental health; Cognition","score_opus":0.1070947486217826,"score_gpt":0.4654497129746095,"score_spread":0.35835496435282693,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2058086184","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97109365,0.00042521534,0.00024396408,0.027110357,0.0005666997,0.00026331402,0.0000011408795,0.0000098329,0.00028584723],"genre_scores_gemma":[0.9822977,0.0004935646,0.014703487,0.0011347383,0.0013113347,0.0000019755348,0.000008114184,0.000008503569,0.000040537525],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.996448,0.0003028401,0.0023599719,0.00019193822,0.00050286256,0.00019439378],"domain_scores_gemma":[0.9979206,0.000516785,0.00055268925,0.0001616759,0.00021251413,0.0006357926],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021573282,0.00012821183,0.0007136162,0.00021713758,0.00003832459,0.0000194882,0.00010122757,0.0001862602,0.000017789089],"category_scores_gemma":[0.0019087206,0.000083189625,0.00042951465,0.00034449276,0.00017956861,0.00027292137,0.000009569707,0.0009988508,0.000013801035],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.015694741,0.0028270243,0.78887916,0.000030700965,0.00021201475,0.00043771064,0.0004726359,0.00001790411,0.00017813918,0.006270055,0.0009417882,0.18403812],"study_design_scores_gemma":[0.010511797,0.005257533,0.92561895,0.00045663922,0.00011509174,0.00008027461,0.00009844885,0.00049239956,0.00014291256,0.056900002,0.0002474938,0.00007844423],"about_ca_topic_score_codex":0.0000039867045,"about_ca_topic_score_gemma":0.00008585038,"teacher_disagreement_score":0.18395966,"about_ca_system_score_codex":0.000058782276,"about_ca_system_score_gemma":0.0009998969,"threshold_uncertainty_score":0.4339565},"labels":[],"label_agreement":null},{"id":"W2058262736","doi":"10.1172/jci16253","title":"Energy expenditure, sex, and endogenous fuel availability in humans","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Adipose Tissue and Metabolism","field":"Medicine","cited_by":130,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Nutrition, Metabolism and Diabetes","funders":"Sundhed og Sygdom, Det Frie Forskningsråd; U.S. Public Health Service; National Institute of Diabetes and Digestive and Kidney Diseases; National Center for Research Resources; Medical Research Council; Mayo Foundation for Medical Education and Research","keywords":"Respiratory quotient; Lipolysis; Adipose tissue; Endocrinology; Internal medicine; Obesity; Basal metabolic rate; Resting energy expenditure; Energy expenditure; Biology; Medicine; Chemistry","score_opus":0.12020181993678392,"score_gpt":0.36600020029785185,"score_spread":0.24579838036106794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2058262736","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9921866,0.0033419314,0.00016607266,0.0004929045,0.00039082544,0.000082533355,7.062831e-7,0.0000060938482,0.003332319],"genre_scores_gemma":[0.9943963,0.0009791433,0.0023099491,0.001331252,0.00048769018,0.0000015063138,0.0000024607004,0.000009799919,0.0004818753],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99794096,0.00033843034,0.0012072243,0.00014542275,0.00023749677,0.00013048835],"domain_scores_gemma":[0.9986389,0.0003316224,0.0004550328,0.00014646818,0.00011659508,0.00031134154],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021273305,0.00009428318,0.0005202942,0.000100594516,0.00002419381,0.000010547159,0.000045674948,0.00016106495,0.00008250088],"category_scores_gemma":[0.0019923993,0.000073429444,0.00010921421,0.00009611366,0.0001810721,0.00015003714,0.0000095736705,0.0003952955,0.000004351797],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029164253,0.00073114556,0.93477595,0.00012296165,0.00014946195,0.00041353595,0.0016656602,0.00000800552,0.013629439,0.013843647,0.002163847,0.03220469],"study_design_scores_gemma":[0.008814626,0.0015754482,0.7145841,0.00026823833,0.00039329572,0.0010004899,0.00041211225,0.000055012515,0.017976377,0.074632235,0.18000221,0.00028586085],"about_ca_topic_score_codex":0.000024510964,"about_ca_topic_score_gemma":0.000020654374,"teacher_disagreement_score":0.22019187,"about_ca_system_score_codex":0.000020856769,"about_ca_system_score_gemma":0.00023686312,"threshold_uncertainty_score":0.2994366},"labels":[],"label_agreement":null},{"id":"W2059241988","doi":"10.1172/jci33010","title":"STAT1 promotes megakaryopoiesis downstream of GATA-1 in mice","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Platelet Disorders and Treatments","field":"Medicine","cited_by":102,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto; Ontario Institute for Cancer Research","funders":"National Cancer Institute; National Institutes of Health; Leukemia and Lymphoma Society","keywords":"Megakaryocyte; STAT5; Ectopic expression; Thrombopoiesis; STAT1; Gene knockdown; Biology; Thrombopoietin; Cell biology; Phosphorylation; Cancer research; STAT3; GATA1; Megakaryocytopoiesis; Immunology; Progenitor cell; Haematopoiesis; Stem cell; Cell culture; Genetics","score_opus":0.06806310014251697,"score_gpt":0.39242720317645696,"score_spread":0.32436410303394,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2059241988","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974445,0.00021443809,0.00009548383,0.0012739022,0.00015502324,0.00013500058,0.0000031071113,0.0000043650252,0.0006741431],"genre_scores_gemma":[0.99269515,0.000119681805,0.006690628,0.00028485275,0.00011767843,4.8849614e-7,0.000009070658,0.000007667334,0.00007478823],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99776137,0.00007009172,0.001631248,0.00009772688,0.0003082328,0.00013134089],"domain_scores_gemma":[0.9980534,0.00054644287,0.0008725898,0.00009443256,0.00023217064,0.00020097842],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001992942,0.00008573804,0.0005603073,0.00017716206,0.000012814263,0.0000051364595,0.000060725342,0.00012488278,0.000025834957],"category_scores_gemma":[0.0018727566,0.00006245091,0.0001595795,0.00022928075,0.00014698647,0.00016173067,0.000010871966,0.000289846,0.0000049195173],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00086988334,0.0009965203,0.9652572,0.00008599491,0.0001833258,0.00054553256,0.00037268107,0.0000089941095,0.0047197416,0.000097362856,0.00055247376,0.026310256],"study_design_scores_gemma":[0.005055049,0.0016054003,0.9589918,0.0004731141,0.00018542379,0.0001759614,0.00018980485,0.0000987721,0.027401498,0.0054419613,0.00030568134,0.00007549541],"about_ca_topic_score_codex":0.00004897741,"about_ca_topic_score_gemma":0.00005809063,"teacher_disagreement_score":0.026234759,"about_ca_system_score_codex":0.000041968295,"about_ca_system_score_gemma":0.00031458054,"threshold_uncertainty_score":0.25466743},"labels":[],"label_agreement":null},{"id":"W2059754026","doi":"10.1172/jci46276","title":"Prolactin increases SMN expression and survival in a mouse model of severe spinal muscular atrophy via the STAT5 pathway","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Neurogenetic and Muscular Disorders Research","field":"Medicine","cited_by":81,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agricultural Research Institute of Ontario; University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada; FightSMA; University of Ottawa; Universidad de Granada; Spinal Muscular Atrophy Foundation","keywords":"SMN1; Spinal muscular atrophy; SMA*; Motor neuron; STAT5; Downregulation and upregulation; Biology; Prolactin; Endocrinology; Internal medicine; Cancer research; Spinal cord; Cell biology; Signal transduction; Gene; Neuroscience; Medicine; Hormone; Genetics","score_opus":0.13418759534044758,"score_gpt":0.36911202970049806,"score_spread":0.23492443436005048,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2059754026","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99788404,0.00027846463,0.0011554937,0.00030422356,0.000041114035,0.00026454695,0.0000023240448,0.0000034392795,0.000066346074],"genre_scores_gemma":[0.99556756,0.00034444162,0.003780495,0.00017767097,0.000077346216,0.0000040260866,0.0000014456119,0.000012794987,0.000034248264],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977945,0.00047659845,0.0009546191,0.00013872996,0.0005028676,0.00013266556],"domain_scores_gemma":[0.998664,0.00017997349,0.00048465413,0.00018479183,0.00025936807,0.0002272031],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019388215,0.00009553316,0.00038655795,0.00010249634,0.000032315864,0.000007674977,0.00010845914,0.0001033674,0.0000139998865],"category_scores_gemma":[0.0015014852,0.000058170815,0.00016206704,0.000112356494,0.00029483144,0.000117372176,0.00005330907,0.0005118393,8.5243687e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011775156,0.0015034922,0.5280757,0.00041422283,0.0001695112,0.00008803275,0.0013313346,0.0003985284,0.43407267,0.0002470881,0.00010771706,0.021816554],"study_design_scores_gemma":[0.0101998495,0.0055307616,0.85203487,0.00081148744,0.00022140647,0.00015408886,0.0008107427,0.017128536,0.101264164,0.011499655,0.000095060575,0.00024937777],"about_ca_topic_score_codex":0.000045680383,"about_ca_topic_score_gemma":0.000012592737,"teacher_disagreement_score":0.3328085,"about_ca_system_score_codex":0.000011661487,"about_ca_system_score_gemma":0.0003559653,"threshold_uncertainty_score":0.2372137},"labels":[],"label_agreement":null},{"id":"W2060571859","doi":"10.1172/jci42497","title":"Pancreatic GLP-1 receptor activation is sufficient for incretin control of glucose metabolism in mice","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":171,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Lunenfeld-Tanenbaum Research Institute; University of Toronto; Mount Sinai Hospital","funders":"Canadian Institutes of Health Research; Synchrotron Light Research Institute; Banting and Best Diabetes Centre, University of Toronto; Novo Nordisk; University of Toronto","keywords":"Endocrinology; Internal medicine; Glucose homeostasis; Incretin; Glucagon-like peptide-1; PDX1; Biology; Pancreatic islets; Glucagon-like peptide 1 receptor; Insulin; Carbohydrate metabolism; Glucagon; Islet; Receptor; Agonist; Type 2 diabetes; Insulin resistance; Diabetes mellitus; Medicine","score_opus":0.08783127618807195,"score_gpt":0.34515637841943836,"score_spread":0.2573251022313664,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2060571859","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99455726,0.00020665872,0.0028147462,0.0013217252,0.00039162295,0.00037976218,0.000007851949,0.000007254376,0.00031308888],"genre_scores_gemma":[0.9850937,0.000097565215,0.012278619,0.0020828221,0.00034417154,0.000010500486,0.000008857202,0.000011926434,0.000071796734],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9973713,0.00022812345,0.0018345612,0.00013342054,0.00029915024,0.00013342981],"domain_scores_gemma":[0.99633753,0.0012805307,0.0014182394,0.00012576478,0.0006281548,0.00020979557],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.002663403,0.00010801193,0.00076385506,0.00020501183,0.0000203758,0.0000060600046,0.00007281239,0.00016270105,0.0001632358],"category_scores_gemma":[0.009589394,0.00008300162,0.0002524824,0.00022483719,0.0001450303,0.00017351755,0.00000765571,0.00025910183,0.000007104717],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.01005623,0.0016312498,0.5503772,0.00042954838,0.0005318592,0.000003158572,0.0031580692,0.00002450524,0.41778812,0.0024101648,0.00573895,0.007850943],"study_design_scores_gemma":[0.012007218,0.0019094163,0.54432803,0.00072224706,0.0005788582,0.0000059516656,0.00039055583,0.0023647023,0.4329937,0.0028089294,0.00176218,0.00012816559],"about_ca_topic_score_codex":0.000038132133,"about_ca_topic_score_gemma":9.3948785e-7,"teacher_disagreement_score":0.015205613,"about_ca_system_score_codex":0.000038287344,"about_ca_system_score_gemma":0.00029276355,"threshold_uncertainty_score":0.99875325},"labels":[],"label_agreement":null},{"id":"W2061188756","doi":"10.1172/jci40433","title":"An N-terminal truncated carboxypeptidase E splice isoform induces tumor growth and is a biomarker for predicting future metastasis in human cancers","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Protein Degradation and Inhibitors","field":"Biochemistry, Genetics and Molecular Biology","cited_by":62,"is_retracted":true,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute","funders":"Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; Lawson Health Research Institute","keywords":"Metastasis; Cancer research; Cancer; Biology; Biomarker; Melanoma; Downregulation and upregulation; Gene knockdown; Cell culture; Gene; Genetics","score_opus":0.07579314404921753,"score_gpt":0.3616556316969689,"score_spread":0.28586248764775135,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2061188756","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990678,0.00014297316,0.000086193264,0.00021669273,0.0002330534,0.0001649622,0.000012976866,0.0000035983971,0.000071793],"genre_scores_gemma":[0.9954504,0.00005830527,0.003059633,0.0006412212,0.0007352244,0.000009297284,0.000026539064,0.000011456558,0.000007929073],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986451,0.0001219973,0.00080712076,0.00018638808,0.000118629294,0.000120759105],"domain_scores_gemma":[0.9988523,0.000025228805,0.00065684656,0.000103920655,0.00018130815,0.00018037889],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010088858,0.000106456435,0.0002174124,0.00008813927,0.000057975227,0.00001765168,0.00011665686,0.00014651965,0.0000066123575],"category_scores_gemma":[0.00041119274,0.00008825007,0.00009579425,0.00009761741,0.0001231969,0.00004499334,0.000019386996,0.00016974135,1.3231599e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011006284,0.0002065464,0.15216745,0.000103170205,0.00017419105,0.000014694587,0.0011250712,0.0000021027467,0.83373606,0.00013650462,0.0013824471,0.009851128],"study_design_scores_gemma":[0.0026860868,0.0026198805,0.22038136,0.00012928205,0.00010986438,0.000061994564,0.0007938627,0.0004179674,0.7704018,0.0014305235,0.0007230148,0.000244411],"about_ca_topic_score_codex":0.000090575864,"about_ca_topic_score_gemma":0.00006458718,"teacher_disagreement_score":0.0682139,"about_ca_system_score_codex":0.000014555516,"about_ca_system_score_gemma":0.00017685657,"threshold_uncertainty_score":0.35987332},"labels":[],"label_agreement":null},{"id":"W2062283395","doi":"10.1172/jci29148","title":"Neuropeptide signaling and hydrocephalus: SCO with the flow","year":2006,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Pituitary Gland Disorders and Treatments","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Subcommissural organ; Hydrocephalus; Cerebrospinal fluid; Receptor; Ependymal Cell; Neuropeptide; Adenylate kinase; Internal medicine; Ventricular system; Endocrinology; Medicine; Biology; Neuroscience; Cell biology; Central nervous system; Surgery","score_opus":0.04967839516196598,"score_gpt":0.31895014025923923,"score_spread":0.26927174509727325,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2062283395","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.47243863,0.00095052674,0.00016440192,0.5254231,0.00022489727,0.00021253667,0.0000056929725,0.000009912515,0.0005703056],"genre_scores_gemma":[0.17594217,0.00029801537,0.0035006218,0.810467,0.008073894,0.0000043175232,0.00015117304,0.00006541674,0.001497401],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980487,0.00020499519,0.00091795897,0.00018317242,0.00049180863,0.00015331921],"domain_scores_gemma":[0.9979867,0.0005554921,0.00095517037,0.00016488912,0.00020365189,0.00013414757],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00061999715,0.00019852829,0.000627035,0.000082488856,0.00007665988,0.000045425204,0.00009110647,0.00029309854,0.000016404707],"category_scores_gemma":[0.00023173164,0.00009574846,0.00019503466,0.00009999609,0.00028574312,0.000120896475,0.00001667114,0.001682537,0.000007238346],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021338226,0.00007482422,0.057407606,0.000105498584,0.00033917645,0.0015473446,0.00004156272,0.00014793765,0.000019212011,0.0000020699204,0.93770266,0.0023987333],"study_design_scores_gemma":[0.018982647,0.011422503,0.20302248,0.0040855194,0.007156714,0.0030242782,0.00008092512,0.002765441,0.00017000089,0.007441431,0.7410614,0.00078664534],"about_ca_topic_score_codex":0.000017292587,"about_ca_topic_score_gemma":0.0000052475157,"teacher_disagreement_score":0.29649645,"about_ca_system_score_codex":0.00001594395,"about_ca_system_score_gemma":0.0002692833,"threshold_uncertainty_score":0.73098797},"labels":[],"label_agreement":null},{"id":"W2062378136","doi":"10.1172/jci11596","title":"Homocysteine-induced endoplasmic reticulum stress causes dysregulation of the cholesterol and triglyceride biosynthetic pathways","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Endoplasmic Reticulum Stress and Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":705,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hamilton Health Sciences; McMaster University","funders":"National Institutes of Health; National Institute of Neurological Disorders and Stroke; American Heart Association; Office of Research and Development; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; Heart and Stroke Foundation of Canada; U.S. Department of Veterans Affairs","keywords":"Endoplasmic reticulum; Hyperhomocysteinemia; Unfolded protein response; Cystathionine beta synthase; Homocysteine; Endocrinology; Steatosis; Internal medicine; Lipogenesis; Cholesterol; Triglyceride; Biology; Fatty liver; Chemistry; Biochemistry; Lipid metabolism; Methionine; Medicine","score_opus":0.03988282685411246,"score_gpt":0.30939198330863005,"score_spread":0.26950915645451756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2062378136","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986546,0.00023254211,0.0000613242,0.000438315,0.00036693102,0.00013941182,0.000013391571,0.0000031896395,0.00009031074],"genre_scores_gemma":[0.99889237,0.00038481675,0.00019024365,0.00016383818,0.00030772263,0.0000025414122,0.000008285715,0.000012474242,0.000037729682],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998202,0.00021997753,0.0010219138,0.00017636461,0.0002556033,0.0001240998],"domain_scores_gemma":[0.9981879,0.000112088725,0.0010247875,0.0002669861,0.00023184283,0.00017636723],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004977951,0.00012784105,0.0002845056,0.00004568828,0.00005690957,0.000022876182,0.00017075283,0.00016347454,0.000005395267],"category_scores_gemma":[0.0013512778,0.00008580549,0.00020199394,0.00010083073,0.00027091958,0.000016959437,0.00006168998,0.00016934595,6.808909e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032758128,0.00016041659,0.3864274,0.00006686778,0.00009565703,0.000010621525,0.00007062995,0.0003016047,0.6087302,0.00023598562,0.00014708513,0.003425936],"study_design_scores_gemma":[0.00212637,0.0006915076,0.3232318,0.00029907515,0.00015408639,0.00015228959,0.00011424198,0.0005382398,0.6711396,0.0010592835,0.00034701003,0.00014650021],"about_ca_topic_score_codex":0.000011754841,"about_ca_topic_score_gemma":0.000024355426,"teacher_disagreement_score":0.06319562,"about_ca_system_score_codex":0.0000067616675,"about_ca_system_score_gemma":0.00015275487,"threshold_uncertainty_score":0.34990463},"labels":[],"label_agreement":null},{"id":"W2063400663","doi":"10.1172/jci42703","title":"Primary deficiency of microsomal triglyceride transfer protein in human abetalipoproteinemia is associated with loss of CD1 function","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":77,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Allergy and Infectious Diseases; Harvard Digestive Diseases Center, Harvard University; Deutsche Forschungsgemeinschaft; Brigham and Women's Hospital; National Cancer Institute; National Institutes of Health; Cancer Research UK; Crohn's and Colitis Foundation; Lister Institute of Preventive Medicine; Wellcome Trust; National Heart, Lung, and Blood Institute; Crohn's and Colitis Foundation of America","keywords":"Microsomal triglyceride transfer protein; CD1; CD1D; Immune system; Biology; Antigen presentation; Lipid metabolism; Antigen; Chemistry; Lipoprotein; T cell; Immunology; Antigen-presenting cell; Biochemistry; Natural killer T cell; Cholesterol; Very low-density lipoprotein","score_opus":0.02611369904497336,"score_gpt":0.2892956699414767,"score_spread":0.26318197089650336,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2063400663","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978123,0.00008940003,0.00024378851,0.00018646714,0.0011141752,0.00025218521,0.0000031631478,0.000008100428,0.00029042063],"genre_scores_gemma":[0.99894416,0.000009086704,0.00011999943,0.00015059258,0.0000537598,0.000004550506,0.000036699646,0.00001154227,0.0006696303],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972945,0.00031000617,0.001982969,0.00015125913,0.00011564796,0.00014562717],"domain_scores_gemma":[0.9978727,0.0001773306,0.0012784217,0.00015027676,0.0004893463,0.00003194126],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015897935,0.0001307914,0.0005753316,0.00020847385,0.00005263106,0.000007191597,0.00013511762,0.0004226188,0.0003606144],"category_scores_gemma":[0.0004941842,0.00010150757,0.00021026308,0.00024511377,0.0004935766,0.00030136792,0.000011651621,0.0010969881,0.000006074541],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016151185,0.00040439257,0.027642936,0.00003574646,0.000098481505,0.000001911057,0.00018775059,0.00000682058,0.9684233,0.000198321,0.0002471863,0.0011380094],"study_design_scores_gemma":[0.0051550097,0.002390483,0.19922885,0.00030576723,0.000099236546,0.000037761212,0.00006825553,0.0000060783136,0.7915665,0.0004117387,0.000617944,0.00011236826],"about_ca_topic_score_codex":0.000076778815,"about_ca_topic_score_gemma":0.000057032437,"teacher_disagreement_score":0.17685682,"about_ca_system_score_codex":0.000031051208,"about_ca_system_score_gemma":0.00023050909,"threshold_uncertainty_score":0.47659284},"labels":[],"label_agreement":null},{"id":"W2064059882","doi":"10.1172/jci35433","title":"Pathogen destruction versus intracellular survival: the role of lipids as phagosomal fate determinants","year":2008,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Phagocytosis and Immune Regulation","field":"Immunology and Microbiology","cited_by":101,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"Canadian Institutes of Health Research; Hospital for Sick Children; Heart and Stroke Foundation of Canada","keywords":"Phagosome; Phagocytosis; Cell biology; Innate immune system; Biology; Lipid metabolism; Intracellular; Immune system; Pathogen; Microbiology; Immunology; Biochemistry","score_opus":0.11528880576704806,"score_gpt":0.386865450945929,"score_spread":0.2715766451788809,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2064059882","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07548527,0.9191413,0.000017154596,0.000028862345,0.004923671,0.00029435003,0.000014955363,0.000010366716,0.00008410573],"genre_scores_gemma":[0.0154570425,0.9835296,0.000113597365,0.00001259286,0.0006786112,0.000006577993,0.000086580345,0.000034713943,0.00008067269],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9936078,0.0021440256,0.00360495,0.00024198637,0.00017137022,0.00022984348],"domain_scores_gemma":[0.9920373,0.0015127215,0.0056470023,0.000374085,0.00036528913,0.00006362089],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018691169,0.00032418003,0.0020709538,0.00017529729,0.00015648198,0.000018818306,0.00049524306,0.0009676802,0.0000532734],"category_scores_gemma":[0.0019171794,0.00020460186,0.00119177,0.00025792848,0.0006859295,0.00025936845,0.00007821209,0.0011535854,0.000079061654],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002229745,0.00009070811,0.00038514944,0.00026807954,0.00054992246,0.00000539008,0.000089229645,0.0000027891983,0.002157703,0.00015919143,0.00013210044,0.99593675],"study_design_scores_gemma":[0.0017348327,0.0011237143,0.0010121576,0.0029951367,0.0014827048,0.0007745159,0.00007598157,0.000013857888,0.005043247,0.0008591368,0.9846102,0.00027450218],"about_ca_topic_score_codex":0.00001862725,"about_ca_topic_score_gemma":0.000002835975,"teacher_disagreement_score":0.9956623,"about_ca_system_score_codex":0.00006101336,"about_ca_system_score_gemma":0.00073026237,"threshold_uncertainty_score":0.8343422},"labels":[],"label_agreement":null},{"id":"W2064420783","doi":"10.1172/jci77116","title":"MicroRNA-182 drives metastasis of primary sarcomas by targeting multiple genes","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":98,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Neurological Disorders and Stroke; National Institute of Allergy and Infectious Diseases; National Institutes of Health; National Cancer Institute; University of Texas MD Anderson Cancer Center; Novartis Institutes for BioMedical Research; Brigham and Women's Hospital","keywords":"Intravasation; Metastasis; microRNA; Cancer research; Primary tumor; Biology; Cancer; In vivo; Sarcoma; Circulating tumor cell; Medicine; Pathology; Gene; Genetics","score_opus":0.03296922359700192,"score_gpt":0.31240504952076675,"score_spread":0.2794358259237648,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2064420783","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9904914,0.0023505297,0.006443663,0.00032321108,0.00023253924,0.00008226446,0.000013450339,0.0000036594486,0.000059292357],"genre_scores_gemma":[0.9770681,0.00027648857,0.021576755,0.00030643723,0.0005920541,0.0000012607585,0.00012405784,0.000017387423,0.000037413523],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99774224,0.000420228,0.0013201961,0.0001730918,0.000222988,0.00012127057],"domain_scores_gemma":[0.99755484,0.00019238667,0.001475653,0.00018430372,0.00042567376,0.00016712608],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017024815,0.0001163567,0.0003561964,0.00005039719,0.000038400725,0.000014568879,0.00018713897,0.00016785071,0.000009057081],"category_scores_gemma":[0.0026519494,0.000101667276,0.00024413918,0.00008322235,0.00021356781,0.000017703776,0.000055493303,0.00013824277,0.00000211695],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008859616,0.000076919205,0.06584293,0.000040984174,0.00009593182,3.9514583e-7,0.000013563429,0.00013154387,0.9166271,0.000015782805,0.007950613,0.009115611],"study_design_scores_gemma":[0.001144309,0.00037485966,0.06534255,0.000060149843,0.00010670449,0.000008569253,0.00001858758,0.00039681836,0.8999738,0.00046856466,0.031966846,0.00013825539],"about_ca_topic_score_codex":0.000004361874,"about_ca_topic_score_gemma":0.0000018186576,"teacher_disagreement_score":0.024016235,"about_ca_system_score_codex":0.000012613073,"about_ca_system_score_gemma":0.00015096775,"threshold_uncertainty_score":0.4145871},"labels":[],"label_agreement":null},{"id":"W2065426985","doi":"10.1172/jci18555","title":"Impaired pancreatic growth, β cell mass, and β cell function in E2F1 –/– mice","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":97,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institutes of Health; Centre National de la Recherche Scientifique; Institute of Genetics; Fondation pour la Recherche Médicale; Institut National de la Santé et de la Recherche Médicale","keywords":"Function (biology); Cell growth; Pancreatic function; Cell biology; Cell; Cell function; Biology; Chemistry; Endocrinology; Cancer research; Internal medicine; Pancreas; Medicine; Biochemistry","score_opus":0.04430414978812112,"score_gpt":0.307244697278432,"score_spread":0.26294054749031087,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2065426985","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994732,0.00058906956,0.0005852947,0.0020539337,0.00043441998,0.00014788265,8.207048e-7,0.000015246513,0.0014413057],"genre_scores_gemma":[0.9910364,0.00040475867,0.0059647374,0.0019237611,0.00043240495,0.0000023456996,0.0000061522733,0.000013125393,0.0002162831],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980091,0.00014535207,0.0012594945,0.00015489224,0.00028437536,0.00014680022],"domain_scores_gemma":[0.9982308,0.00045797197,0.0006335245,0.00010312417,0.00022458898,0.00034998247],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013327022,0.00012128561,0.0005169761,0.00017926298,0.000031823558,0.000021457781,0.000043342203,0.00018028225,0.000033411434],"category_scores_gemma":[0.0016503932,0.00009631701,0.0001401133,0.00023342679,0.0001315355,0.0002457665,0.000009578595,0.00044112938,0.000023064264],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009822825,0.00048155457,0.89706033,0.0003250766,0.000060355207,0.000056234898,0.00025082304,0.00011501484,0.09786332,0.00026033464,0.0011551704,0.0013894791],"study_design_scores_gemma":[0.014055123,0.0028371606,0.9155374,0.000597114,0.0005162208,0.000066992565,0.0003018591,0.00045406376,0.0387602,0.026307939,0.00038743712,0.00017848967],"about_ca_topic_score_codex":0.000031186257,"about_ca_topic_score_gemma":0.0000027893116,"teacher_disagreement_score":0.059103116,"about_ca_system_score_codex":0.00006820619,"about_ca_system_score_gemma":0.00032850986,"threshold_uncertainty_score":0.39276937},"labels":[],"label_agreement":null},{"id":"W2066417197","doi":"10.1172/jci34149","title":"Identification of kinetin riboside as a repressor of CCND1 and CCND2 with preclinical antimyeloma activity","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Protein Degradation and Inhibitors","field":"Biochemistry, Genetics and Molecular Biology","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto; Ontario Institute for Cancer Research","funders":"National Cancer Institute; National Institute on Aging; Ontario Institute for Cancer Research; Multiple Myeloma Research Foundation","keywords":"Cyclin D2; Cyclin D1; Cyclin D; Biology; Cancer research; Cyclin; Cyclin A; Cyclin D3; Cyclin A2; Cyclin E; Cell cycle; Molecular biology; Cell biology; Cancer; Genetics","score_opus":0.05357447636482407,"score_gpt":0.36054459710926406,"score_spread":0.30697012074443997,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066417197","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978862,0.0001414416,0.0011062389,0.0005602898,0.00010628789,0.00012258282,0.000004039348,0.000002379308,0.000070561575],"genre_scores_gemma":[0.99646175,0.0005085403,0.0025947362,0.00009122828,0.00021255547,0.0000018972818,0.000006959584,0.000008128656,0.000114229086],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99794924,0.00026470906,0.001282074,0.0001752561,0.00025804818,0.00007066471],"domain_scores_gemma":[0.9971258,0.00013911207,0.0019676564,0.00021070214,0.00043941467,0.000117321346],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001314825,0.00008433278,0.0003177839,0.000051776467,0.0000307176,0.0000064656933,0.000109830245,0.00017451613,0.000005287247],"category_scores_gemma":[0.0029718792,0.0000661195,0.000118141084,0.000094764946,0.0005071704,0.000025543257,0.000028313587,0.00017847621,7.8311103e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008669893,0.00021616086,0.12904221,0.000038225076,0.00008188103,0.0000031826914,0.000057658293,0.000037050857,0.8655606,0.0000576485,0.0007166065,0.003321781],"study_design_scores_gemma":[0.00089415564,0.001086114,0.29654494,0.000064378444,0.00003238168,0.000055958593,0.000009176385,0.00009721066,0.7005213,0.00024032041,0.0003966387,0.000057426718],"about_ca_topic_score_codex":0.000010379399,"about_ca_topic_score_gemma":0.000002884005,"teacher_disagreement_score":0.16750273,"about_ca_system_score_codex":0.000003660432,"about_ca_system_score_gemma":0.00018877405,"threshold_uncertainty_score":0.35578316},"labels":[],"label_agreement":null},{"id":"W2066509904","doi":"10.1172/jci10211","title":"Viral antichemokines: from pathogenesis to drug discovery","year":2000,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Pathogenesis; Drug discovery; Medicine; Virology; Drug; Computational biology; Pharmacology; Bioinformatics; Biology; Immunology","score_opus":0.08667854039801026,"score_gpt":0.3935439624992023,"score_spread":0.30686542210119205,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066509904","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5594308,0.00035037062,0.000051236533,0.43870255,0.00076507666,0.00025830028,0.00009367995,0.000013451208,0.0003345406],"genre_scores_gemma":[0.026110196,0.0013833764,0.003916873,0.91505307,0.045362476,0.0000084766325,0.00035677975,0.00012135576,0.0076874173],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99445903,0.0004506439,0.002765237,0.00043351797,0.0015151097,0.00037647746],"domain_scores_gemma":[0.9961178,0.0012389169,0.00107756,0.0005014853,0.00050005165,0.00056424073],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0016739024,0.00033004818,0.0016123353,0.00042687546,0.00006291927,0.00017290613,0.00037105792,0.0009562842,0.0005451157],"category_scores_gemma":[0.0020048267,0.0002487985,0.00091914576,0.00031820548,0.00023747241,0.0003658375,0.00007190885,0.0038792365,0.00028494024],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007226789,0.00010577957,0.013857857,0.00010607016,0.00029555318,0.0013307174,0.00010187549,0.000006134968,0.0013911319,0.0000024458275,0.9617497,0.020330092],"study_design_scores_gemma":[0.0016841186,0.000609426,0.044834048,0.001129468,0.00054384704,0.00006721693,0.000014856639,0.0000459593,0.0012247574,0.0014347014,0.9481234,0.00028823348],"about_ca_topic_score_codex":0.00020355124,"about_ca_topic_score_gemma":0.000013467944,"teacher_disagreement_score":0.5333206,"about_ca_system_score_codex":0.00012328365,"about_ca_system_score_gemma":0.001266994,"threshold_uncertainty_score":0.9999964},"labels":[],"label_agreement":null},{"id":"W2066987530","doi":"10.1172/jci31854","title":"Pten controls lung morphogenesis, bronchioalveolar stem cells, and onset of lung adenocarcinomas in mice","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Polyamine Metabolism and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":169,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research","funders":"Yasuda Memorial Medical Foundation; Novartis Foundation; Suzuken Memorial Foundation","keywords":"PTEN; Cancer research; Lung; Carcinogenesis; Biology; Tumor suppressor gene; Pathology; Adenocarcinoma; PI3K/AKT/mTOR pathway; Cancer; Medicine; Internal medicine; Cell biology; Signal transduction; Genetics","score_opus":0.027018199640648374,"score_gpt":0.32492952536392494,"score_spread":0.29791132572327655,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066987530","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99250597,0.0047454364,0.0022145675,0.00020451922,0.00013434784,0.00013403408,0.000020122807,0.0000016232914,0.00003938189],"genre_scores_gemma":[0.9969147,0.0005394571,0.00183722,0.00029649175,0.00032419318,0.0000018285205,0.000014031255,0.000009542408,0.00006257363],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9982606,0.00013745033,0.0011736141,0.00015091668,0.00014479306,0.00013260283],"domain_scores_gemma":[0.99865764,0.000163794,0.0007310272,0.00013960316,0.00014141884,0.00016650998],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018788995,0.00009425348,0.0003142927,0.00007630995,0.000025565643,0.000009534054,0.00014013895,0.00016799424,0.0000027135968],"category_scores_gemma":[0.00021061198,0.00008371742,0.00011319917,0.000103651306,0.00015764171,0.0000119721335,0.000038531347,0.00017476067,5.4153986e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023060177,0.00008101651,0.30940413,0.000028596936,0.000050019855,0.0000046260116,0.00003656109,0.000029673616,0.68623805,0.00012056844,0.0008585548,0.0029175726],"study_design_scores_gemma":[0.002572178,0.00015679769,0.578529,0.000047606878,0.000102434686,0.000035376408,0.000060470986,0.00040517736,0.4157441,0.0002080385,0.0020246552,0.00011417657],"about_ca_topic_score_codex":0.000019091993,"about_ca_topic_score_gemma":0.000026582546,"teacher_disagreement_score":0.27049398,"about_ca_system_score_codex":0.0000075208054,"about_ca_system_score_gemma":0.00012838407,"threshold_uncertainty_score":0.34138975},"labels":[],"label_agreement":null},{"id":"W2067735292","doi":"10.1172/jci64151","title":"MicroRNAs contribute to compensatory β cell expansion during pregnancy and obesity","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Birth, Development, and Health","field":"Medicine","cited_by":168,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"National Health and Medical Research Council; Medical Research Council; Société Francophone du Diabète; Fondation pour la Recherche Médicale; European Foundation for the Study of Diabetes; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; National Science Foundation","keywords":"Endocrinology; microRNA; Internal medicine; GPER; Biology; Insulin resistance; Estrogen receptor; Gene silencing; Insulin; Cell; Medicine; Gene; Genetics","score_opus":0.0802865116520196,"score_gpt":0.368948658995544,"score_spread":0.2886621473435244,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2067735292","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949168,0.0015623688,0.00015705192,0.0022802288,0.0006568351,0.0002132473,0.0000014168838,0.0000108529275,0.00020122492],"genre_scores_gemma":[0.9860098,0.005749158,0.005923467,0.0016967073,0.00055217237,0.0000011618546,0.0000027354924,0.000010044768,0.000054768665],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99822086,0.00014627745,0.0010828313,0.00010709572,0.00023051513,0.00021241538],"domain_scores_gemma":[0.9980691,0.00017060369,0.0006031572,0.0001041059,0.00025048445,0.000802563],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013309335,0.000094406605,0.00043895305,0.00008643942,0.00008408945,0.000011428389,0.000047581885,0.0001403444,0.00001728078],"category_scores_gemma":[0.00065664796,0.0000752392,0.0000823743,0.000085586835,0.00007481643,0.00021211032,0.000030809708,0.00043417138,0.000023802477],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001526638,0.00019156751,0.9603581,0.00026784767,0.000024664902,0.000014342335,0.00057726895,4.776409e-7,0.035640985,0.00037877666,0.0012609615,0.0011323676],"study_design_scores_gemma":[0.002332663,0.00029935088,0.9632251,0.0011549946,0.00006195908,0.000106679676,0.000068658344,0.000005069181,0.03136065,0.00077644584,0.0005313642,0.00007706697],"about_ca_topic_score_codex":0.0000045352126,"about_ca_topic_score_gemma":0.0000021994456,"teacher_disagreement_score":0.008906989,"about_ca_system_score_codex":0.00005675157,"about_ca_system_score_gemma":0.00028009957,"threshold_uncertainty_score":0.30681655},"labels":[],"label_agreement":null},{"id":"W2067753785","doi":"10.1172/jci44339","title":"Noninvasive imaging of pancreatic islet inflammation in type 1A diabetes patients","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Diabetes and associated disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":208,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Center for Research Resources; Pfizer; National Heart, Lung, and Blood Institute; U.S. Public Health Service; National Cancer Institute; National Institutes of Health; RSNA Research and Education Foundation; Covis Pharma; Radiological Society of North America; Harvard University; Harvard Catalyst; Cancer Research Institute","keywords":"Insulitis; Pancreas; Islet; Medicine; Type 1 diabetes; Inflammation; Magnetic resonance imaging; Diabetes mellitus; Pancreatic islets; Pathology; Type 2 diabetes; Immunology; Internal medicine; Endocrinology; Radiology","score_opus":0.013304576467184198,"score_gpt":0.29324893878754854,"score_spread":0.27994436232036435,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2067753785","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99901885,0.00006684787,0.000008974225,0.0002732348,0.00040607393,0.00006221049,0.000002348628,0.0000012993507,0.00016014105],"genre_scores_gemma":[0.99883395,0.00007280243,0.00061603996,0.00018768068,0.00023126115,8.6390577e-7,0.00003734779,0.0000074614354,0.00001260292],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987623,0.000099066754,0.00081318454,0.00008736596,0.00013889346,0.00009920289],"domain_scores_gemma":[0.9985089,0.00009668447,0.00084825023,0.00009096212,0.00038958556,0.00006566619],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008063217,0.00006651938,0.00020761121,0.000056836005,0.000013968845,0.000011321162,0.00009798827,0.00011595936,0.000007488162],"category_scores_gemma":[0.0033552852,0.000058405796,0.00009336101,0.00010267229,0.00009607584,0.000017982718,0.000022274107,0.0001857641,0.0000015727152],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023239998,0.00005486249,0.8432054,0.00001117669,0.000026062638,4.0045666e-7,0.00002828609,0.00003879189,0.15187472,0.000022811682,0.00038754952,0.0043266853],"study_design_scores_gemma":[0.0020088532,0.00066481816,0.7850714,0.00012729339,0.00005859928,6.7569937e-7,0.000060405022,0.00045504083,0.20771004,0.0025916817,0.0011116208,0.00013957746],"about_ca_topic_score_codex":0.0000040903587,"about_ca_topic_score_gemma":0.000017299108,"teacher_disagreement_score":0.058134012,"about_ca_system_score_codex":0.0000047700555,"about_ca_system_score_gemma":0.00011621299,"threshold_uncertainty_score":0.4016832},"labels":[],"label_agreement":null},{"id":"W2068014330","doi":"10.1172/jci14661","title":"Putting the brakes on arthritis: can suppressors of cytokine signaling (SOCS) suppress rheumatoid arthritis?","year":2001,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Cytokine Signaling Pathways and Interactions","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital","funders":"","keywords":"Cytokine; Janus kinase; Suppressor of cytokine signalling; JAK-STAT signaling pathway; SOCS3; Suppressor of cytokine signaling 1; Biology; Cytokine receptor; Immunology; Src family kinase; stat; Signal transduction; Cancer research; Kinase; Immune system; Medicine; Tyrosine kinase; Cell biology; Suppressor; STAT3; Genetics; Cancer","score_opus":0.07611232099468855,"score_gpt":0.34822776013809104,"score_spread":0.27211543914340247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2068014330","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.52722603,0.0014921424,0.00011836285,0.46667874,0.0032095865,0.00052908825,0.00014598112,0.00004403084,0.00055604643],"genre_scores_gemma":[0.73190004,0.0067310436,0.0021589731,0.2380374,0.020266883,0.00001982765,0.00034215246,0.00017115392,0.00037249728],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9924628,0.000757937,0.0045888177,0.00041057527,0.0013577143,0.00042213552],"domain_scores_gemma":[0.989482,0.0036578213,0.004827003,0.00055854494,0.0011897036,0.00028491323],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0026920454,0.00044488037,0.0018503614,0.00039958875,0.00018628406,0.000112084614,0.00041817542,0.00090910576,0.00035223],"category_scores_gemma":[0.005931916,0.0003159669,0.0012079665,0.00033125136,0.0005799417,0.00023841768,0.000056207173,0.0057548224,0.000013342164],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038083157,0.00035001923,0.004318966,0.0002883667,0.00091114914,0.0011553228,0.00056865974,0.0007207482,0.022795796,0.000094795774,0.9491021,0.019313265],"study_design_scores_gemma":[0.008070356,0.0055314577,0.0047822506,0.040251415,0.00070531294,0.004266427,0.00041287136,0.0006190134,0.104549974,0.005519924,0.8245158,0.00077520456],"about_ca_topic_score_codex":0.00010720431,"about_ca_topic_score_gemma":0.000029656781,"teacher_disagreement_score":0.22864132,"about_ca_system_score_codex":0.000081453916,"about_ca_system_score_gemma":0.0006576874,"threshold_uncertainty_score":0.99992925},"labels":[],"label_agreement":null},{"id":"W2068671129","doi":"10.1172/jci63528","title":"The NF-κB regulator MALT1 determines the encephalitogenic potential of Th17 cells","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":113,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto; Ontario Institute for Cancer Research","funders":"Deutsche Forschungsgemeinschaft; Canadian Institutes of Health Research; Terry Fox Foundation; Alexander von Humboldt-Stiftung","keywords":"RELB; Experimental autoimmune encephalomyelitis; Cell biology; Neuroinflammation; Biology; Regulator; Interleukin 17; Autoimmunity; Immunology; Cytokine; Transcription factor; Immune system; Inflammation; NFKB1","score_opus":0.039316574740532365,"score_gpt":0.3267949869912838,"score_spread":0.28747841225075144,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2068671129","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99165535,0.0028255975,0.00012900603,0.0018466363,0.003370124,0.00010672156,0.0000012628984,0.000004779609,0.00006054485],"genre_scores_gemma":[0.9981472,0.0004557216,0.00012312367,0.00018326263,0.0005886074,0.0000019522556,0.0000033286187,0.0000057967036,0.00049101055],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99699324,0.0011491238,0.001500079,0.000064810425,0.00009879241,0.00019392236],"domain_scores_gemma":[0.99653465,0.001345717,0.0015839153,0.00023239588,0.00026577068,0.000037549205],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0046419445,0.00009174568,0.000268811,0.000043014148,0.00020108026,0.000017409004,0.00030652253,0.00021118906,0.000053310232],"category_scores_gemma":[0.0013987615,0.00004586435,0.0002862417,0.00009104385,0.0006229101,0.00029430576,0.000043095595,0.00038637483,0.000056396337],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00055903883,0.00006473687,0.008107621,0.0000106441175,0.00020501205,9.0692885e-7,0.0004030989,0.000020449781,0.9619046,0.0011185635,0.0044370545,0.023168294],"study_design_scores_gemma":[0.0008507088,0.0003121201,0.11891,0.000057431153,0.00016406305,0.00012485852,0.00026749878,0.000030904845,0.84388715,0.0015128341,0.03379895,0.000083494655],"about_ca_topic_score_codex":0.0000068476875,"about_ca_topic_score_gemma":0.0000015827707,"teacher_disagreement_score":0.11801745,"about_ca_system_score_codex":0.000011964294,"about_ca_system_score_gemma":0.0001534585,"threshold_uncertainty_score":0.22951382},"labels":[],"label_agreement":null},{"id":"W2068859282","doi":"10.1172/jci24685","title":"The role of 2 FOXP3 isoforms in the generation of human CD4+ Tregs","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":437,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver Coastal Health; Vancouver Coastal Health Research Institute; University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Michael Smith Health Research BC","keywords":"FOXP3; IL-2 receptor; In vitro; Transcription factor; Cell biology; Suppressor; Biology; Gene isoform; Ectopic expression; Immunology; Chemistry; Immune system; T cell; Gene; Genetics","score_opus":0.07476707422737831,"score_gpt":0.3548335584808393,"score_spread":0.280066484253461,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2068859282","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99514925,0.0009323896,0.000050808165,0.0016283252,0.001015561,0.0000800693,4.021098e-7,0.000002213501,0.0011409884],"genre_scores_gemma":[0.9986787,0.00018404829,0.000058610945,0.00026442294,0.0002379043,0.000001621374,0.000011336532,0.0000036276303,0.0005597511],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978539,0.0004815527,0.0014573799,0.000058450143,0.000068192145,0.00008055754],"domain_scores_gemma":[0.99791914,0.00047312534,0.0012610332,0.00013145315,0.00020448556,0.000010750826],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002427767,0.00005946673,0.00021076378,0.00006825175,0.00009537481,0.000009614452,0.00017009661,0.00014296325,0.000083359126],"category_scores_gemma":[0.0006824316,0.0000311663,0.0001604813,0.0000951964,0.00023921428,0.00021408462,0.000011386656,0.00042909067,0.000015784153],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002547686,0.00025353758,0.016078375,0.0000056471195,0.00009106267,2.2606021e-7,0.0013335524,0.000119174125,0.9156674,0.005564449,0.010052065,0.05057975],"study_design_scores_gemma":[0.0025913056,0.0019094719,0.11047967,0.000103735554,0.00009504257,0.00005915269,0.002969482,0.0005861456,0.7384096,0.0052632126,0.1374195,0.000113702234],"about_ca_topic_score_codex":0.000025670164,"about_ca_topic_score_gemma":0.00005924942,"teacher_disagreement_score":0.17725782,"about_ca_system_score_codex":0.00001698442,"about_ca_system_score_gemma":0.000060202146,"threshold_uncertainty_score":0.18642093},"labels":[],"label_agreement":null},{"id":"W2068996358","doi":"10.1172/jci70026","title":"A feed-forward spinal cord glycinergic neural circuit gates mechanical allodynia","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pain Mechanisms and Treatments","field":"Medicine","cited_by":279,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Neurological Disorders and Stroke; Peking University; National Institute of Dental and Craniofacial Research; University of Ottawa","keywords":"Inhibitory postsynaptic potential; Glycine receptor; Neuroscience; Allodynia; Nociception; Neuropathic pain; Spinal cord; Excitatory postsynaptic potential; Neurotransmission; Medicine; Chemistry; Hyperalgesia; Biology; Glycine; Receptor; Internal medicine","score_opus":0.10812587266910419,"score_gpt":0.3856029535707906,"score_spread":0.27747708090168643,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2068996358","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9905078,0.00015988514,0.0008921225,0.0069852863,0.00079920836,0.00031728164,0.000001247434,0.00002970194,0.00030747594],"genre_scores_gemma":[0.98831666,0.00008699929,0.0070324214,0.003176895,0.0010009418,0.000009373068,0.000009666504,0.000024942772,0.00034210543],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99686456,0.00023499821,0.0017795346,0.00023319882,0.0006155407,0.00027215833],"domain_scores_gemma":[0.99713016,0.00029120455,0.0010151287,0.00022994365,0.00053925405,0.0007943111],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013568515,0.00020419568,0.0007769599,0.00013227739,0.00006647713,0.000053493375,0.00015748508,0.00024342518,0.00030987765],"category_scores_gemma":[0.0018849181,0.00014314096,0.00046492508,0.00019736271,0.00013667562,0.00035619366,0.000035005487,0.0006670585,0.00016592079],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008799533,0.0039528282,0.39692175,0.00048409117,0.0028904031,0.0018912371,0.00024360867,0.00009632663,0.13043967,0.027160443,0.032442592,0.39467752],"study_design_scores_gemma":[0.0131866345,0.024497353,0.8161592,0.0009789616,0.0012315038,0.0015560886,0.00016851364,0.010970014,0.0066379006,0.12181002,0.0023342778,0.00046955125],"about_ca_topic_score_codex":0.00003572746,"about_ca_topic_score_gemma":0.0000026324335,"teacher_disagreement_score":0.41923743,"about_ca_system_score_codex":0.000060707807,"about_ca_system_score_gemma":0.00023548404,"threshold_uncertainty_score":0.5837119},"labels":[],"label_agreement":null},{"id":"W2069938061","doi":"10.1172/jci35639","title":"Immunosuppression in islet transplantation","year":2008,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Institutes of Health; Deutsche Forschungsgemeinschaft; Belgian American Educational Foundation","keywords":"Immunosuppression; Islet; Transplantation; Medicine; Immunology; Population; Immune tolerance; Immune system; CD8; Glucose homeostasis; Diabetes mellitus; Internal medicine; Endocrinology; Insulin resistance","score_opus":0.0942872400159028,"score_gpt":0.3717509028813602,"score_spread":0.2774636628654574,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069938061","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6138313,0.0004934497,0.00008917956,0.3820146,0.0017699869,0.0002084924,0.00000704555,0.000015518908,0.001570432],"genre_scores_gemma":[0.044256505,0.0061832727,0.004188817,0.9291158,0.0136308,0.000007387464,0.0005087326,0.00005928274,0.0020494056],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9963669,0.00038967034,0.0023008098,0.00017262898,0.0006091397,0.00016084897],"domain_scores_gemma":[0.9969929,0.0010146443,0.00139693,0.00017873773,0.00028540363,0.00013142268],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0010438014,0.0001758973,0.0009509478,0.0003585753,0.000026738831,0.0000136400995,0.00009454244,0.00096309965,0.00012504915],"category_scores_gemma":[0.0019076657,0.00013300263,0.00038632052,0.00018547708,0.00016912329,0.00018504215,0.000006627179,0.0028481118,0.000033895725],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035470896,0.00007576318,0.03151933,0.00027148394,0.000081891485,0.0011827159,0.00013319042,0.00000979242,0.0010669017,0.000002846539,0.96377945,0.0015219331],"study_design_scores_gemma":[0.012203199,0.002206391,0.24695906,0.0067364327,0.00097321905,0.0020456153,0.00003635193,0.00043675923,0.0052145263,0.0018557542,0.7208927,0.00043992948],"about_ca_topic_score_codex":0.000010943626,"about_ca_topic_score_gemma":3.5483157e-7,"teacher_disagreement_score":0.5695748,"about_ca_system_score_codex":0.000059853606,"about_ca_system_score_gemma":0.0005316789,"threshold_uncertainty_score":0.99945235},"labels":[],"label_agreement":null},{"id":"W2070414981","doi":"10.1172/jci68341","title":"Deep brain stimulation (DBS) at the interface of neurology and psychiatry","year":2013,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Neurological disorders and treatments","field":"Medicine","cited_by":128,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre for Movement Disorders","funders":"Parkinsonfonden; National Institute on Drug Abuse; National Parkinson Foundation","keywords":"Deep brain stimulation; Tourette syndrome; Neurology; Neuroscience; Medicine; Major depressive disorder; Psychiatry; Disease; Parkinson's disease; Psychology; Mood; Internal medicine","score_opus":0.1502683941708566,"score_gpt":0.46944260361026563,"score_spread":0.319174209439409,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2070414981","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.066973664,0.92359877,0.000080558995,0.008096631,0.0006186538,0.0005574865,0.0000023343064,0.000004902451,0.000067032706],"genre_scores_gemma":[0.0027738374,0.9933309,0.000485638,0.002930225,0.00030773086,0.000005822877,0.000013118541,0.000020642836,0.0001321054],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9967916,0.00067217555,0.0020039324,0.00019382026,0.00023255167,0.000105912746],"domain_scores_gemma":[0.9952733,0.001783374,0.0024331862,0.00019977136,0.00013369891,0.00017669534],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00081083336,0.00019095013,0.0014942151,0.00008308996,0.000038354905,0.00001070178,0.000108784545,0.00039218238,0.00008118427],"category_scores_gemma":[0.0018231213,0.00009411808,0.00048612923,0.00012375145,0.00035024396,0.000066664485,0.000064238004,0.0008024966,0.000017086117],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026009305,0.00030563716,0.021040903,0.002379356,0.00046055403,0.000016175369,0.000035111527,0.000024698347,0.0000028319046,0.00013527845,0.0070322473,0.96830714],"study_design_scores_gemma":[0.010315791,0.024138717,0.12922452,0.012792858,0.0119614145,0.0012783678,0.000035626857,0.0017157353,0.000007378897,0.05045294,0.7574545,0.0006221369],"about_ca_topic_score_codex":0.0000032986338,"about_ca_topic_score_gemma":0.00000558808,"teacher_disagreement_score":0.967685,"about_ca_system_score_codex":0.000012120182,"about_ca_system_score_gemma":0.00017201104,"threshold_uncertainty_score":0.38380238},"labels":[],"label_agreement":null},{"id":"W2071039886","doi":"10.1172/jci63563","title":"Hepatic sortilin regulates both apolipoprotein B secretion and LDL catabolism","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":223,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Heart, Lung, and Blood Institute; University of Pennsylvania; Strong; American Heart Association","keywords":"Apolipoprotein B; Catabolism; Internal medicine; Endocrinology; Secretion; Lysosome; Biology; Intracellular; Chemistry; Cell biology; Cholesterol; Biochemistry; Enzyme; Metabolism; Medicine","score_opus":0.03360024377918306,"score_gpt":0.3120263134213961,"score_spread":0.278426069642213,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2071039886","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929579,0.0017481608,0.004426374,0.0003133585,0.00040675214,0.00009356601,0.0000021135418,0.0000040226955,0.000047741567],"genre_scores_gemma":[0.9954436,0.0006604423,0.0017559637,0.00025455552,0.0015531353,0.000001733298,0.000227081,0.000012226092,0.000091291855],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99861467,0.00014380329,0.000808488,0.00011457793,0.00017337807,0.00014510084],"domain_scores_gemma":[0.9989577,0.00003088402,0.0005220438,0.00012749857,0.00011265782,0.0002492124],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015286831,0.000097576245,0.00021908709,0.000042677915,0.00004434154,0.00001600224,0.00006792971,0.00021399425,0.000013007614],"category_scores_gemma":[0.00039114984,0.00008310529,0.00012430258,0.000052737043,0.00015043096,0.000027606186,0.000016256077,0.00018333406,0.0000025385084],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017932903,0.000083277075,0.37454003,0.00004082114,0.00005497268,0.0000016565185,0.00019612466,0.000016553431,0.61756355,0.00034226652,0.00020011728,0.006781327],"study_design_scores_gemma":[0.0011853997,0.00044612115,0.8345268,0.00008389771,0.00013036795,0.00006220754,0.000069333626,0.00042016897,0.14239432,0.0025111882,0.017959984,0.0002102266],"about_ca_topic_score_codex":0.000016190503,"about_ca_topic_score_gemma":0.000010410663,"teacher_disagreement_score":0.4751692,"about_ca_system_score_codex":0.0000059591393,"about_ca_system_score_gemma":0.000072731964,"threshold_uncertainty_score":0.33889353},"labels":[],"label_agreement":null},{"id":"W2072045863","doi":"10.1172/jci12627","title":"Generation of experimental allergic airways inflammation in the absence of draining lymph nodes","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Asthma and respiratory diseases","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; McMaster University Medical Centre","funders":"Canadian Institutes of Health Research","keywords":"Immunology; Ovalbumin; Spleen; Allergic inflammation; Lymph; Sensitization; Lymphatic system; Inflammation; Medicine; Splenocyte; Immunoglobulin E; Antigen; Pathology; Antibody","score_opus":0.15358021607135777,"score_gpt":0.4018668624508431,"score_spread":0.2482866463794853,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2072045863","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99818814,0.00039544105,0.00024508758,0.00065790367,0.00012735838,0.00009314084,5.032373e-7,0.0000025152656,0.00028993658],"genre_scores_gemma":[0.998161,0.000103723156,0.00080480473,0.00031061564,0.00059886073,0.000001766071,0.000004705542,0.000004763814,0.000009747129],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997888,0.00023502228,0.0013587176,0.00007044689,0.00038335525,0.000064424305],"domain_scores_gemma":[0.9983517,0.00024191706,0.0010122763,0.00010309631,0.00021411902,0.00007688911],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014091597,0.00006333744,0.00028058316,0.000098387856,0.000023981083,0.00000670017,0.00007978908,0.00007986161,0.000025790547],"category_scores_gemma":[0.0010310503,0.00004049187,0.00013882143,0.00016259673,0.00018906534,0.00019625305,0.000009016545,0.00013739441,0.000001328046],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005363373,0.0003859635,0.7051559,0.000052844942,0.00003611779,0.000039881466,0.0022537645,0.0018035348,0.26874658,0.00050624064,0.00018756096,0.020295285],"study_design_scores_gemma":[0.0027462826,0.001039571,0.9229282,0.00048425014,0.000048371538,0.00006597744,0.0018391549,0.007986204,0.06192764,0.00048090523,0.00037931863,0.000074137526],"about_ca_topic_score_codex":0.000006087394,"about_ca_topic_score_gemma":0.0000019389392,"teacher_disagreement_score":0.21777229,"about_ca_system_score_codex":0.000019914358,"about_ca_system_score_gemma":0.00023441087,"threshold_uncertainty_score":0.16512105},"labels":[],"label_agreement":null},{"id":"W2072590237","doi":"10.1172/jci17220","title":"The secretory proprotein convertases furin, PC5, and PC7 activate VEGF-C to induce tumorigenesis","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Lymphatic System and Diseases","field":"Medicine","cited_by":203,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute","funders":"Canadian Institutes of Health Research","keywords":"Furin; Proprotein Convertases; Angiogenesis; Proprotein convertase; Cell biology; Molecular biology; Chemistry; Cleavage (geology); Carcinogenesis; Biology; Cancer research; Biochemistry; Enzyme; Gene","score_opus":0.08073920457234184,"score_gpt":0.3712970140702853,"score_spread":0.29055780949794346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2072590237","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99426836,0.00066976104,0.000071575356,0.0039011599,0.00044271522,0.0003580657,0.0000016285442,0.0000100034085,0.0002767063],"genre_scores_gemma":[0.996292,0.00008985913,0.0007835025,0.0019664748,0.0004664058,0.000010404722,0.0000010913145,0.000012536823,0.00037773146],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99788165,0.00039670835,0.0010585958,0.00013930922,0.00038233635,0.0001413756],"domain_scores_gemma":[0.99744594,0.00080827577,0.0006075927,0.00018149873,0.0003465697,0.00061009725],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0018386224,0.00011015837,0.0003957274,0.0000586053,0.00011268472,0.00004491683,0.00007557532,0.000089141904,0.000029479459],"category_scores_gemma":[0.0091670705,0.000063302425,0.00011979184,0.00014076184,0.00015612639,0.00014522506,0.000015308917,0.00008525039,0.000016315616],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002912091,0.0006734247,0.9045809,0.0006323202,0.0007277992,0.00028202546,0.0011756856,0.000010138254,0.0313492,0.0051700994,0.023573963,0.028912343],"study_design_scores_gemma":[0.006158704,0.0033197396,0.84109926,0.00096536125,0.00096361426,0.00062193925,0.0015008443,0.000057792116,0.11042531,0.007157129,0.027379923,0.0003503558],"about_ca_topic_score_codex":0.0000101033565,"about_ca_topic_score_gemma":0.0000026142413,"teacher_disagreement_score":0.079076104,"about_ca_system_score_codex":0.0000430264,"about_ca_system_score_gemma":0.0007862305,"threshold_uncertainty_score":0.9991791},"labels":[],"label_agreement":null},{"id":"W2072691337","doi":"10.1172/jci34584","title":"Tumor therapy in mice via antigen targeting to a novel, DC-restricted C-type lectin","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":506,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Sunnybrook Health Science Centre","funders":"Canadian Institutes of Health Research; Cancer Research UK","keywords":"Antigen; CTL*; C-type lectin; Biology; Cross-presentation; Immunology; CD8; Epitope; Priming (agriculture); Dendritic cell; T cell; Immune system; Cancer research; MHC class I","score_opus":0.08076732815346165,"score_gpt":0.3413902789587154,"score_spread":0.2606229508052537,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2072691337","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9892223,0.0003547965,0.0011219212,0.0012098898,0.007855818,0.00013402026,2.0872533e-7,0.000017194196,0.00008386271],"genre_scores_gemma":[0.9943183,0.000310024,0.0017405787,0.002416789,0.00024534503,0.0000016926888,0.000014937627,0.000012903456,0.00093940215],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99777347,0.00038780508,0.0014387155,0.00015450017,0.00006775426,0.00017774018],"domain_scores_gemma":[0.99822485,0.0004418313,0.0007852206,0.0000897316,0.00040205434,0.000056284127],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009648129,0.00011579155,0.00037472468,0.00024297276,0.0001057346,0.000010706591,0.000120974015,0.00018553622,0.00028975718],"category_scores_gemma":[0.0026527345,0.00009710558,0.0001332937,0.0004263192,0.000103639715,0.00025567706,0.000019719864,0.00077082915,0.0002754754],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010967633,0.0002867161,0.036782842,0.0000025287297,0.00006300892,0.000014055805,0.00039725826,0.000085337524,0.9197477,0.000011451489,0.04008145,0.0014308639],"study_design_scores_gemma":[0.006109283,0.0032822152,0.5204115,0.00014295986,0.000021226628,0.0008061621,0.00021550752,0.00016304888,0.319384,0.00015674674,0.14901373,0.00029364697],"about_ca_topic_score_codex":0.0000951249,"about_ca_topic_score_gemma":0.000007875802,"teacher_disagreement_score":0.60036373,"about_ca_system_score_codex":0.0000440976,"about_ca_system_score_gemma":0.0002488504,"threshold_uncertainty_score":0.39598504},"labels":[],"label_agreement":null},{"id":"W2072693941","doi":"10.1172/jci64398","title":"GSK-3α is a central regulator of age-related pathologies in mice","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":177,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"National Heart, Lung, and Blood Institute; National Institute of Dental and Craniofacial Research; Canadian Institutes of Health Research","keywords":"mTORC1; Autophagy; Skeletal muscle; Sarcopenia; Biology; GSK-3; Cell biology; PI3K/AKT/mTOR pathway; Regulator; Senescence; Muscle hypertrophy; Kinase; Glycogen synthase; Endocrinology; GSK3B; Proteostasis; Internal medicine; Signal transduction; Phosphorylation; Medicine; Biochemistry; Gene; Apoptosis","score_opus":0.03529901623741275,"score_gpt":0.3284804727403359,"score_spread":0.29318145650292315,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2072693941","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981739,0.0002556094,0.0000415919,0.0010689186,0.00021707705,0.00007796139,0.0000014985509,0.0000019796178,0.00016149873],"genre_scores_gemma":[0.997897,0.00020770637,0.0009874355,0.00072178646,0.00010386532,0.0000016890525,0.000010256668,0.0000053448034,0.00006489668],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985313,0.00020265619,0.00094556913,0.00011904127,0.00008179367,0.000119673496],"domain_scores_gemma":[0.99897194,0.000069449314,0.000623088,0.00011347459,0.00013607022,0.0000859656],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049028127,0.0000729048,0.0002464925,0.00004099015,0.000013589229,0.000005644526,0.00012993476,0.00025942436,0.000036870297],"category_scores_gemma":[0.0011022245,0.0000594008,0.00015168288,0.00007414212,0.00030790365,0.000013363805,0.000031432683,0.00020014774,0.000004441865],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003004207,0.00028763097,0.24945813,0.0000385151,0.00010073652,0.000008591308,0.0002970209,0.00027883914,0.7343491,0.00024470952,0.009547302,0.0050890255],"study_design_scores_gemma":[0.0011739949,0.00072588824,0.93300766,0.00005061718,0.000019185674,0.000009147242,0.00011155054,0.00013658423,0.047022276,0.017384818,0.00027006943,0.00008823157],"about_ca_topic_score_codex":0.000016808513,"about_ca_topic_score_gemma":0.000005095765,"teacher_disagreement_score":0.6873268,"about_ca_system_score_codex":0.0000043091686,"about_ca_system_score_gemma":0.000107209526,"threshold_uncertainty_score":0.24222945},"labels":[],"label_agreement":null},{"id":"W2072855828","doi":"10.1172/jci39457","title":"Integrin-linked kinase: both Jekyll and Hyde in rhabdomyosarcoma","year":2009,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"","keywords":"Rhabdomyosarcoma; Embryonal rhabdomyosarcoma; Alveolar rhabdomyosarcoma; Cancer research; Integrin-linked kinase; Integrin; Oncogene; Suppressor; Biology; Kinase; Medicine; Sarcoma; Protein kinase A; Internal medicine; Pathology; Cancer; Cell biology; Receptor; Cell cycle","score_opus":0.09747765355614357,"score_gpt":0.38401387234186574,"score_spread":0.28653621878572216,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2072855828","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.47325414,0.0022057176,0.000007840635,0.5235257,0.00045883562,0.00027600466,0.0000034185432,0.000010732255,0.0002576243],"genre_scores_gemma":[0.20810743,0.003332759,0.0064234836,0.772232,0.009313495,0.000013105218,0.000119785385,0.00006484881,0.00039311085],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9958465,0.00041653632,0.0025287708,0.0003252046,0.0006192775,0.00026373053],"domain_scores_gemma":[0.99636483,0.0012602025,0.0015496243,0.00028797478,0.0002299568,0.00030742973],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0015405314,0.00031530365,0.0014792592,0.00040231968,0.000029207435,0.000048690155,0.00014175483,0.001038792,0.00004088557],"category_scores_gemma":[0.0019453383,0.00022876449,0.00044537132,0.00019471916,0.00024865026,0.0001510444,0.000030850082,0.0037175026,0.000013596917],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021764303,0.00047914108,0.37298715,0.00014255266,0.00022423212,0.0061792205,0.00008012855,0.0000018690306,0.000030215851,0.000051408024,0.5708384,0.04876805],"study_design_scores_gemma":[0.005832254,0.0018728912,0.7121555,0.0027984122,0.000630734,0.0007661182,0.000018711065,0.00011561629,0.00008094407,0.00625645,0.26922294,0.0002493946],"about_ca_topic_score_codex":0.00003352194,"about_ca_topic_score_gemma":0.000012986485,"teacher_disagreement_score":0.33916837,"about_ca_system_score_codex":0.00014488642,"about_ca_system_score_gemma":0.00043738677,"threshold_uncertainty_score":0.99858093},"labels":[],"label_agreement":null},{"id":"W2073256068","doi":"10.1172/jci16551","title":"Hot new therapy for sepsis and the acute respiratory distress syndrome","year":2002,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Respiratory Support and Mechanisms","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Artificial Intelligence in Medicine (Canada)","funders":"","keywords":"ARDS; Intensive care medicine; Sepsis; Acute respiratory distress; Medicine; Respiratory distress; Translational research; Basic research; Immunology; Lung; Internal medicine; Pathology; Surgery","score_opus":0.15333942944909348,"score_gpt":0.39138973498160906,"score_spread":0.23805030553251558,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2073256068","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17793454,0.0030666173,0.0008190058,0.8141378,0.0024235132,0.0014086033,0.00004554892,0.00002514593,0.00013918812],"genre_scores_gemma":[0.0031040814,0.0016316071,0.002447238,0.9741105,0.013112512,0.00002433836,0.000065032174,0.00008269481,0.0054220115],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99643993,0.0003550913,0.0020599125,0.00027507934,0.0006353016,0.00023465371],"domain_scores_gemma":[0.9954472,0.0013180793,0.0021448438,0.00036814949,0.00036026223,0.00036143148],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023112893,0.0002814949,0.0013441385,0.00014914284,0.00008861102,0.00007327123,0.00023344757,0.0009516492,0.00010541581],"category_scores_gemma":[0.0011199324,0.00015790274,0.00078821526,0.00011477893,0.00047347942,0.00016621167,0.000024881918,0.0021797104,0.000008078535],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009417213,0.000030287625,0.0018787163,0.000092509836,0.000676039,0.00048275074,0.00007652144,3.036266e-7,0.00007708382,0.000045768396,0.9827331,0.012965215],"study_design_scores_gemma":[0.010725597,0.00272919,0.0050144778,0.00046228865,0.0011363738,0.0004880859,0.0000132723,0.000039021124,0.0002078181,0.005248863,0.9737443,0.00019072354],"about_ca_topic_score_codex":0.0000032839373,"about_ca_topic_score_gemma":5.84216e-7,"teacher_disagreement_score":0.17483047,"about_ca_system_score_codex":0.000030734653,"about_ca_system_score_gemma":0.00051014207,"threshold_uncertainty_score":0.94698787},"labels":[],"label_agreement":null},{"id":"W2073640180","doi":"10.1172/jci37787","title":"Cardiac troponin T mutations promote life-threatening arrhythmias","year":2008,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Cardiomyopathy and Myosin Studies","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Montreal Heart Institute","funders":"Canadian Institutes of Health Research; Heart and Stroke Foundation of Canada","keywords":"Myofilament; Mutation; Sudden cardiac death; Internal medicine; Cardiology; Troponin; Medicine; Sudden death; Sarcomere; Myocyte; Biology; Genetics; Gene","score_opus":0.10812122636932668,"score_gpt":0.37155054070071053,"score_spread":0.26342931433138383,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2073640180","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.22994965,0.0052913595,0.00031151704,0.7567073,0.0055714655,0.0006427255,0.00003901307,0.00006530792,0.0014216551],"genre_scores_gemma":[0.048412647,0.012581635,0.02001726,0.755644,0.15662108,0.000048371076,0.0005706698,0.00025536242,0.005848949],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9950825,0.0005425142,0.002753806,0.00032465218,0.0009911249,0.00030542197],"domain_scores_gemma":[0.99484307,0.0009869501,0.002323933,0.00032991724,0.0011343306,0.00038177762],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0017015738,0.00033994392,0.0021408214,0.00031384014,0.00016499699,0.000038582235,0.000122921,0.001016648,0.000021440826],"category_scores_gemma":[0.0063628745,0.00026889003,0.0016532528,0.00028401086,0.0006177389,0.0001973089,0.0000454654,0.00420683,0.000044541197],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014834097,0.00003445631,0.0078053284,0.00016943907,0.0012181756,0.00290666,0.00038970337,0.000017827013,0.00008369383,0.0000093458675,0.98322594,0.003991112],"study_design_scores_gemma":[0.0023064844,0.001261641,0.031739138,0.0015354059,0.0029233312,0.002420322,0.000094007235,0.000048541806,0.00027645953,0.0008641068,0.9561552,0.00037540807],"about_ca_topic_score_codex":0.000009869294,"about_ca_topic_score_gemma":3.7059937e-7,"teacher_disagreement_score":0.181537,"about_ca_system_score_codex":0.000109329696,"about_ca_system_score_gemma":0.0014223144,"threshold_uncertainty_score":0.99997634},"labels":[],"label_agreement":null},{"id":"W2076843567","doi":"10.1172/jci80743","title":"Quantification of mutant huntingtin protein in cerebrospinal fluid from Huntington’s disease patients","year":2015,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Genetic Neurodegenerative Diseases","field":"Neuroscience","cited_by":270,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"FP7 Health; Biotechnology and Biological Sciences Research Council; Medical Research Council; Directorate for Biological Sciences; Rosetrees Trust; University College London Hospitals NHS Foundation Trust; Vetenskapsrådet; Knut och Alice Wallenbergs Stiftelse; Wellcome Trust; Academy of Medical Sciences; CHDI Foundation; European Huntington's Disease Network; National Institute for Health and Care Research","keywords":"Huntingtin; Huntington's disease; Cerebrospinal fluid; Huntingtin Protein; Mutant; Disease; Medicine; Biology; Pathology; Genetics; Gene","score_opus":0.14522328702958304,"score_gpt":0.3666846870905437,"score_spread":0.22146140006096066,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076843567","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982058,0.000018523133,0.00020802295,0.00063760637,0.00054066547,0.00031599047,0.000028117644,0.000009237831,0.000036035362],"genre_scores_gemma":[0.9979013,0.0000076065085,0.0014678033,0.000338811,0.00023520192,0.0000067578544,0.000009930753,0.00001679046,0.000015771408],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9955564,0.00097373617,0.0021660633,0.00032433207,0.00081496174,0.0001644643],"domain_scores_gemma":[0.99612,0.00044658364,0.0020971214,0.00025676106,0.0006088807,0.00047065938],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0012579345,0.00014138385,0.00039027605,0.00015551812,0.00003490869,0.00004355517,0.00031657625,0.00007412906,0.000015943213],"category_scores_gemma":[0.03353131,0.00012510181,0.00015516751,0.000332755,0.00027472034,0.0003620134,0.00005686207,0.00029046705,0.0000161909],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003785639,0.0005014527,0.62786305,0.000017616645,0.0000037612217,0.0000036448885,0.000111392,0.0004849196,0.3693334,0.00027058166,0.00011844906,0.00091318577],"study_design_scores_gemma":[0.0012468873,0.00029504232,0.4897052,0.0001432379,0.0000220333,2.506014e-7,0.000025478637,0.0010775346,0.5028011,0.004545728,0.000051647534,0.000085819585],"about_ca_topic_score_codex":0.000027214186,"about_ca_topic_score_gemma":0.0000067251653,"teacher_disagreement_score":0.13815784,"about_ca_system_score_codex":0.000038802886,"about_ca_system_score_gemma":0.0005361098,"threshold_uncertainty_score":0.9746097},"labels":[],"label_agreement":null},{"id":"W2077523827","doi":"10.1172/jci29906","title":"Myeloid suppressor cells regulate the adaptive immune response to cancer","year":2006,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Immune cells in cancer","field":"Immunology and Microbiology","cited_by":91,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"School of Medicine, New York University; York University","keywords":"Arginase; Immune system; Myeloid-derived Suppressor Cell; Inflammation; Biology; Tumor microenvironment; Cancer research; Immunology; Population; Myeloid; Suppressor; Cell biology; Mesenchymal stem cell; Effector; Cancer; Medicine; Arginine; Biochemistry","score_opus":0.05288981135810948,"score_gpt":0.3350882654232567,"score_spread":0.2821984540651472,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077523827","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1912486,0.007932135,0.0001155885,0.77861315,0.02098923,0.0006923552,0.00013510349,0.00003276639,0.00024105608],"genre_scores_gemma":[0.051825795,0.00082763185,0.0015036702,0.8375984,0.012219387,0.00009923503,0.00020466006,0.00024423358,0.095476985],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9913998,0.0040595885,0.0033153354,0.0004238956,0.00027026184,0.00053112156],"domain_scores_gemma":[0.99023515,0.0044987295,0.0036166594,0.0007577029,0.0008349303,0.000056847824],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.005365284,0.0004395677,0.0013035693,0.00025208405,0.0002108466,0.000057512807,0.0011618953,0.0021207787,0.00060264923],"category_scores_gemma":[0.0012624492,0.00029488027,0.00077678316,0.0002766573,0.0011049608,0.00017365314,0.00018725499,0.0063644475,0.00045410066],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001754326,0.000030360357,0.00006013833,0.000022285984,0.00045869165,0.00005714307,0.00019380442,0.0002987834,0.12968051,0.000005924816,0.8661942,0.0012438339],"study_design_scores_gemma":[0.0013583136,0.00066931854,0.007757186,0.0005473146,0.00038478817,0.00005700123,0.000025948177,0.000004489712,0.11463855,0.00081583974,0.8734123,0.00032893912],"about_ca_topic_score_codex":0.00016998744,"about_ca_topic_score_gemma":0.000010485984,"teacher_disagreement_score":0.1394228,"about_ca_system_score_codex":0.00022885876,"about_ca_system_score_gemma":0.0010894571,"threshold_uncertainty_score":0.99995035},"labels":[],"label_agreement":null},{"id":"W2077789139","doi":"10.1172/jci33402","title":"Bim-mediated deletion of antigen-specific CD8+ T cells in patients unable to control HBV infection","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":214,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Medical Research Council; University College London","keywords":"Cytotoxic T cell; Interleukin-7 receptor; CD8; Biology; Immunology; Immune system; Antigen; Virology; T cell; IL-2 receptor; In vitro","score_opus":0.08110029745873976,"score_gpt":0.34393435699273883,"score_spread":0.2628340595339991,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077789139","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99726266,0.00008236495,0.0007346316,0.00074058044,0.0007006522,0.00036757058,0.000006346193,0.000010922154,0.00009429452],"genre_scores_gemma":[0.9955036,0.0018646952,0.0014404623,0.0008207701,0.0003228066,0.0000035062812,0.0000100958805,0.000014310642,0.000019730955],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9967673,0.00027841856,0.0020950928,0.00015362367,0.00053615816,0.0001694279],"domain_scores_gemma":[0.99713194,0.000442478,0.0010165557,0.00013704147,0.0010138848,0.0002581192],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014502411,0.00011872005,0.00071178237,0.00034834145,0.000048174676,0.000005639507,0.000057074496,0.00016914115,0.000027733206],"category_scores_gemma":[0.0033732967,0.000101390295,0.00016846842,0.0004913317,0.00017310542,0.00021220217,0.000016923997,0.00040069025,0.0000464497],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004435858,0.0003868194,0.98735213,0.000023023384,0.000050774237,0.000015707252,0.00021149391,0.00019904197,0.0064844126,0.000018797193,0.0035486978,0.0012655407],"study_design_scores_gemma":[0.0045608357,0.0018588315,0.9836994,0.0002753787,0.00002775817,0.0000065956847,0.000007220007,0.00019712762,0.0059025865,0.00015685361,0.0032267245,0.000080709506],"about_ca_topic_score_codex":0.00020082954,"about_ca_topic_score_gemma":0.00008437114,"teacher_disagreement_score":0.0041172495,"about_ca_system_score_codex":0.00010882248,"about_ca_system_score_gemma":0.00021347894,"threshold_uncertainty_score":0.41345763},"labels":[],"label_agreement":null},{"id":"W2077951355","doi":"10.1172/jci64081","title":"GSK3β mediates muscle pathology in myotonic dystrophy","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Genetic Neurodegenerative Diseases","field":"Neuroscience","cited_by":128,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute of Neurological Disorders and Stroke; National Institute of General Medical Sciences; National Institutes of Health; National Cancer Institute; National Heart, Lung, and Blood Institute; National Institute on Aging; Medical Center, University of Rochester","keywords":"Myotonic dystrophy; Myotonia; Skeletal muscle; Biology; Muscle weakness; Muscular dystrophy; Cell biology; Internal medicine; Endocrinology; Genetics; Biochemistry; Medicine","score_opus":0.13139434702508557,"score_gpt":0.38660658953995153,"score_spread":0.25521224251486596,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077951355","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99705046,0.00014148395,0.000062331375,0.0010996343,0.0014070013,0.00009482624,0.0000029181406,0.000008491033,0.0001328722],"genre_scores_gemma":[0.99593484,0.00014124575,0.0010611034,0.0021060584,0.0007193242,0.0000037915513,7.8043377e-7,0.000012226403,0.000020612497],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99691427,0.0011177097,0.0012187831,0.00017098564,0.00033184557,0.00024639827],"domain_scores_gemma":[0.9974134,0.0012315859,0.00075333635,0.00015251417,0.00009534581,0.00035380197],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0014157012,0.00010572933,0.0003141167,0.00013738433,0.000035862136,0.000019617071,0.0002166141,0.00009674859,0.000049459723],"category_scores_gemma":[0.012435617,0.00008576541,0.00014100608,0.00024284517,0.00030745452,0.00036576967,0.000042019943,0.00040581392,0.000049596205],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051570143,0.00034934064,0.39279363,0.000011407701,0.0000036362553,0.00005362236,0.0002707762,0.00030927928,0.6017759,0.001057493,0.000508068,0.0028153104],"study_design_scores_gemma":[0.0006474063,0.00025107063,0.68041795,0.000021315356,0.000016649126,0.000029542252,0.000024614512,0.00015512353,0.31457525,0.0033664615,0.00041423496,0.000080365186],"about_ca_topic_score_codex":0.0000013147455,"about_ca_topic_score_gemma":0.0000017630722,"teacher_disagreement_score":0.28762433,"about_ca_system_score_codex":0.000021708145,"about_ca_system_score_gemma":0.00015514091,"threshold_uncertainty_score":0.99588305},"labels":[],"label_agreement":null},{"id":"W2077986249","doi":"10.1172/jci20430","title":"Quorum sensing and biofilm formation in Streptococcal infections","year":2003,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":291,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Dental and Craniofacial Research; Canadian Institutes of Health Research","keywords":"Quorum sensing; Biofilm; Virulence; Histidine kinase; Microbiology; Response regulator; Regulator; Biology; Streptococcus; Bacteria; Bacterial protein; Histidine; Gene; Genetics; Amino acid","score_opus":0.18355946614448604,"score_gpt":0.4609394692594772,"score_spread":0.27738000311499117,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077986249","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.01920357,0.97634083,0.00048409984,0.00026774706,0.0012228794,0.0015271109,0.000009614655,0.00002654656,0.0009175766],"genre_scores_gemma":[0.0010633259,0.99664044,0.0016564244,0.000106146064,0.00038071984,0.000009878468,0.000036091777,0.000025716967,0.00008125108],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99619067,0.0004663714,0.0027651875,0.00020034472,0.00021031321,0.00016712786],"domain_scores_gemma":[0.9969145,0.00062726083,0.0017581993,0.00017090589,0.00022672139,0.0003024277],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001063319,0.0002494626,0.0017279286,0.0005645598,0.00006207775,0.000043182896,0.000034200253,0.0005124443,0.000024986899],"category_scores_gemma":[0.0013635735,0.00018126743,0.00058341725,0.0005065043,0.00015450895,0.00028190363,0.000019454708,0.0010369036,0.000016185837],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012490852,0.00024546133,0.014181473,0.0016747945,0.00020248594,0.00006315295,0.000019507852,0.0000016978641,0.0000016079601,0.00008064429,0.000351478,0.9831652],"study_design_scores_gemma":[0.0037606684,0.002140848,0.008072408,0.032881882,0.0034473308,0.005224307,0.00005006602,0.00026550746,0.000017233686,0.0013669148,0.9423903,0.00038252008],"about_ca_topic_score_codex":0.000018794475,"about_ca_topic_score_gemma":0.000022692251,"teacher_disagreement_score":0.98278266,"about_ca_system_score_codex":0.00017413046,"about_ca_system_score_gemma":0.0004504432,"threshold_uncertainty_score":0.7391871},"labels":[],"label_agreement":null},{"id":"W2079857524","doi":"10.1172/jci45450","title":"Integral role of integrins in Th17 development","year":2010,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Heart, Lung, and Blood Institute; Louisiana State University","keywords":"Integrin; Autoimmunity; Immunology; T cell; Cell biology; Biology; Cell; Immune system; Genetics","score_opus":0.04766025678134944,"score_gpt":0.31164533453961546,"score_spread":0.263985077758266,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079857524","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91926247,0.0015165438,0.00002752037,0.07298563,0.0053618806,0.00017840498,0.000008544545,0.000013940463,0.00064508663],"genre_scores_gemma":[0.8419136,0.0005962859,0.004849888,0.14340217,0.003155874,0.000015355656,0.0005222536,0.00009291502,0.0054516573],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.994983,0.0007935566,0.0035132507,0.0002655084,0.00011607355,0.00032857197],"domain_scores_gemma":[0.99524766,0.0010315079,0.002994946,0.0002893495,0.0003983858,0.000038122547],"candidate_categories":["research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.00203143,0.00029423524,0.0013141257,0.00045002814,0.000044901466,0.000012282737,0.0006539515,0.004559494,0.00032823175],"category_scores_gemma":[0.0014827116,0.0002199296,0.00040152503,0.00015602224,0.000870889,0.00013194635,0.00011424843,0.013650602,0.00015073088],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026193794,0.00030391235,0.019574376,0.00008009395,0.0005160375,0.00007946121,0.0007122039,0.000001859258,0.6822605,0.00014260408,0.2707851,0.025281915],"study_design_scores_gemma":[0.0015947554,0.00049383234,0.0064432723,0.00043866422,0.000089041874,0.00015642308,0.00011714994,0.0000017013576,0.16913085,0.0031302876,0.81817126,0.00023276548],"about_ca_topic_score_codex":0.00007450842,"about_ca_topic_score_gemma":0.00009973994,"teacher_disagreement_score":0.54738617,"about_ca_system_score_codex":0.00005748138,"about_ca_system_score_gemma":0.0010007506,"threshold_uncertainty_score":0.9967328},"labels":[],"label_agreement":null},{"id":"W2079858542","doi":"10.1172/jci44539","title":"CD4+ T cells from elite controllers resist HIV-1 infection by selective upregulation of p21","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":170,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Cancer Institute; National Institutes of Health; York University; University of Pennsylvania; Florida Department of Health; National Institute of Allergy and Infectious Diseases; Bill and Melinda Gates Foundation","keywords":"Downregulation and upregulation; Biology; Reverse transcriptase; Viral replication; Virology; Immune system; Cancer research; Immunology; Gene; Virus; RNA; Genetics","score_opus":0.06064627039567337,"score_gpt":0.330316308847886,"score_spread":0.2696700384522126,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079858542","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99680644,0.0005528976,0.0008803911,0.00021861136,0.00049663056,0.00015999573,0.00007391566,0.000009200428,0.0008019442],"genre_scores_gemma":[0.99832034,0.00030434792,0.00069736707,0.000070796224,0.00008889801,0.0000033204446,0.00013168376,0.000007656356,0.00037558083],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99771994,0.00077300385,0.0011337611,0.00013986818,0.000090457106,0.00014295799],"domain_scores_gemma":[0.99767405,0.00064276904,0.0010918126,0.00012067804,0.0003917395,0.00007895412],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009943038,0.00010054263,0.0004158969,0.00009715924,0.00006352912,0.000007412929,0.000088883906,0.0002567411,0.0002540222],"category_scores_gemma":[0.0007841188,0.00007841123,0.00020503,0.00011668643,0.0003188754,0.00025330673,0.00001590359,0.00038727053,0.00015260805],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0035351517,0.0008290399,0.37459615,0.000017284683,0.001511348,0.000006880817,0.0009642498,0.00003406956,0.5620946,0.00022093579,0.03921501,0.016975222],"study_design_scores_gemma":[0.0053422228,0.0012673027,0.63609636,0.000103300146,0.00019423338,0.000005963934,0.000045209115,0.000027139902,0.34857467,0.004113208,0.0041313577,0.00009903736],"about_ca_topic_score_codex":0.00033004256,"about_ca_topic_score_gemma":0.000037906306,"teacher_disagreement_score":0.26150018,"about_ca_system_score_codex":0.00004567977,"about_ca_system_score_gemma":0.0001691507,"threshold_uncertainty_score":0.3197517},"labels":[],"label_agreement":null},{"id":"W2080072974","doi":"10.1172/jci45263","title":"Which species are in your feces?","year":2010,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; University of British Columbia Hospital","funders":"National Cancer Institute; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Enterococcus faecium; Feces; Flora (microbiology); Antibiotics; Enterococcus; Biology; Vancomycin-resistant Enterococcus; Vancomycin; Medicine; Intensive care medicine; Microbiology; Bacteria; Immunology; Staphylococcus aureus","score_opus":0.0951756758891416,"score_gpt":0.38354397405892326,"score_spread":0.28836829816978166,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2080072974","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5978794,0.0002165521,0.000022805774,0.39966843,0.001754897,0.00010244873,0.00001529302,0.000002451198,0.00033771107],"genre_scores_gemma":[0.13826528,0.0018645703,0.0030895926,0.808994,0.04369159,0.0000039578763,0.0004857031,0.0000807751,0.0035245072],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9973344,0.0003195411,0.0016151883,0.0002605196,0.0002410119,0.0002293287],"domain_scores_gemma":[0.9969254,0.00009594778,0.0021024656,0.0002758212,0.0004665191,0.00013383199],"candidate_categories":["research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.0015410208,0.00019158555,0.00058825227,0.00013119036,0.000034216373,0.00004165874,0.00032244323,0.0027594583,0.0000394659],"category_scores_gemma":[0.0020715052,0.00016209188,0.0002561133,0.000120092234,0.00015567127,0.000008065973,0.000055197997,0.005081958,0.000015785155],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040144987,0.000035499314,0.06000177,0.0000866602,0.000037552654,0.00003952444,0.000019314342,0.000004515738,0.038102157,0.0000043600035,0.901456,0.00017250393],"study_design_scores_gemma":[0.0006360994,0.00033019544,0.21161677,0.00021767594,0.00003550961,0.00006476051,0.000016318765,0.000003636511,0.0024034758,0.00038072318,0.78411704,0.00017776959],"about_ca_topic_score_codex":0.000012354581,"about_ca_topic_score_gemma":0.0003405276,"teacher_disagreement_score":0.45961413,"about_ca_system_score_codex":0.00001976225,"about_ca_system_score_gemma":0.0006746635,"threshold_uncertainty_score":0.99853516},"labels":[],"label_agreement":null},{"id":"W2080118521","doi":"10.1172/jci57755","title":"In vivo visualization and attenuation of oxidized lipid accumulation in hypercholesterolemic zebrafish","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Atherosclerosis and Cardiovascular Diseases","field":"Immunology and Microbiology","cited_by":98,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; State Government of Victoria; National Health and Medical Research Council; University of California, San Diego; National Institutes of Health; National Heart, Lung, and Blood Institute; Australian Government","keywords":"Zebrafish; Epitope; Oxidative stress; In vivo; Heat shock protein; Malondialdehyde; Green fluorescent protein; Monoclonal antibody; Transgene; Antibody; Chemistry; Biology; Molecular biology; Biochemistry; Cell biology; Immunology; Gene","score_opus":0.12942036466136436,"score_gpt":0.36444829743237506,"score_spread":0.2350279327710107,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2080118521","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99872327,0.0004172095,0.00035600114,0.00006283615,0.00029265578,0.00010711078,0.000002119803,0.0000034943528,0.00003529973],"genre_scores_gemma":[0.99925745,0.00030997684,0.00018197169,0.00017251495,0.00005257405,0.0000021795988,0.0000063866146,0.0000070968954,0.000009850895],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978822,0.0006346352,0.0012200184,0.000114988434,0.00006482196,0.00008334128],"domain_scores_gemma":[0.9988606,0.00017515534,0.00070575177,0.00009135489,0.00013841278,0.00002870446],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018175337,0.00007518318,0.000379428,0.00015852111,0.000015510333,0.0000055224086,0.00007216694,0.00020510305,0.00005382718],"category_scores_gemma":[0.0008056172,0.00006624717,0.0001266297,0.00014828028,0.00014993778,0.00037848784,0.000018379178,0.00018304386,0.0000030017172],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034214472,0.00021445601,0.6908434,0.000024856075,0.00006491333,0.0000012734035,0.0011365482,0.000038873888,0.30426386,0.00042366874,0.00014258598,0.0025033972],"study_design_scores_gemma":[0.003132574,0.0002131942,0.9482198,0.00019507571,0.00006188454,0.000008705543,0.00016805617,0.00008686135,0.046213157,0.0015114509,0.00011969993,0.00006954228],"about_ca_topic_score_codex":0.00004104317,"about_ca_topic_score_gemma":0.000024434159,"teacher_disagreement_score":0.2580507,"about_ca_system_score_codex":0.00001739367,"about_ca_system_score_gemma":0.00006014554,"threshold_uncertainty_score":0.27014813},"labels":[],"label_agreement":null},{"id":"W2080629063","doi":"10.1172/jci63765","title":"Compromised genomic integrity impedes muscle growth after Atrx inactivation","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Genetics and Neurodevelopmental Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; University of Ottawa; McMaster University Medical Centre; Ottawa Hospital","funders":"Canadian Institutes of Health Research; Ottawa Hospital Research Institute","keywords":"ATRX; Biology; Skeletal muscle; Cell biology; Chromatin; Genetics; Anatomy; Mutation; Gene","score_opus":0.05117976661273109,"score_gpt":0.3287129231598622,"score_spread":0.2775331565471311,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2080629063","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981719,0.0002476281,0.00051236385,0.0003372957,0.00049990084,0.0000808266,0.0000021158103,0.000002666018,0.00014530602],"genre_scores_gemma":[0.9947443,0.00025797504,0.0037272566,0.0008599092,0.00034677522,0.0000030854214,0.000017177967,0.000012596797,0.0000308966],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987545,0.00015509238,0.00069028715,0.0001146085,0.00014441203,0.00014110011],"domain_scores_gemma":[0.9990501,0.000040496918,0.0004405271,0.00010034446,0.00018012834,0.00018840881],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008383078,0.00009708419,0.00016927192,0.000040110044,0.000035360667,0.000017661067,0.00010957763,0.00014647174,0.000016868213],"category_scores_gemma":[0.00049035694,0.00008337512,0.00013721982,0.00005866946,0.000099542725,0.0000192777,0.000049752216,0.0002367001,0.000007777337],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019558534,0.0001339404,0.35147876,0.000014626133,0.000042491978,7.3432517e-7,0.00009129093,0.00000654547,0.6435636,0.000049085138,0.0010331896,0.0033901187],"study_design_scores_gemma":[0.0006253024,0.00027218275,0.94610614,0.000014437823,0.000021037991,0.00000763947,0.000046586363,0.000018061319,0.049528323,0.0006395305,0.0026211715,0.000099582],"about_ca_topic_score_codex":0.000004963651,"about_ca_topic_score_gemma":0.0000037438529,"teacher_disagreement_score":0.5946274,"about_ca_system_score_codex":0.000014547335,"about_ca_system_score_gemma":0.00011931283,"threshold_uncertainty_score":0.33999386},"labels":[],"label_agreement":null},{"id":"W2080643168","doi":"10.1172/jci15952","title":"The effects of intravenous pamidronate on the bone tissue of children and adolescents with osteogenesis imperfecta","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Connective tissue disorders research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":292,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Shriners Hospitals for Children - Canada; Montreal Children's Hospital","funders":"","keywords":"Osteogenesis imperfecta; Cancellous bone; Resorption; Bone remodeling; Cortical bone; Bone resorption; Biopsy; Medicine; Endocrinology; Internal medicine; Bone biopsy; Bone tissue; Bone histomorphometry; Chemistry; Osteoporosis; Anatomy; Trabecular bone","score_opus":0.020012068377054014,"score_gpt":0.3061488085369086,"score_spread":0.28613674015985463,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2080643168","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966987,0.0021248513,0.000029509925,0.00085736735,0.00004920251,0.00021592318,0.000002067633,7.1946874e-7,0.00002169492],"genre_scores_gemma":[0.99809,0.0016505521,0.00003417177,0.000085692904,0.00009572197,0.0000021125782,0.0000015808583,0.0000088668185,0.000031270476],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988093,0.00029993773,0.00045617548,0.00010564646,0.00023237735,0.000096582815],"domain_scores_gemma":[0.9987453,0.0003219035,0.00047083673,0.00017521702,0.00021785007,0.000068862006],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007933423,0.00007531779,0.000192842,0.000026761016,0.00005456539,0.000009742212,0.00015098542,0.00007840341,0.0000036857632],"category_scores_gemma":[0.001980624,0.00003944587,0.00006126856,0.000078526406,0.0004172576,0.000004232211,0.00003988831,0.000177713,7.5773255e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010651177,0.00040088134,0.22857767,0.00014860011,0.00037681634,0.000007884742,0.00028053136,0.000033962133,0.62166137,0.00014025171,0.00091126974,0.14639567],"study_design_scores_gemma":[0.001409906,0.0056207743,0.53244686,0.0002664111,0.000057617308,0.000033329703,0.00003650622,0.000049773967,0.45963073,0.00023651899,0.00013713924,0.00007440129],"about_ca_topic_score_codex":0.000011687027,"about_ca_topic_score_gemma":0.000015694111,"teacher_disagreement_score":0.30386922,"about_ca_system_score_codex":0.0000042870665,"about_ca_system_score_gemma":0.000040241037,"threshold_uncertainty_score":0.23711349},"labels":[],"label_agreement":null},{"id":"W2080702078","doi":"10.1172/jci18237","title":"The fractalkine receptor CX3CR1 is a key mediator of atherogenesis","year":2003,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Chemokine receptors and signaling","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Robarts Clinical Trials; Toronto General Hospital","funders":"","keywords":"CX3CR1; Mediator; Key (lock); Receptor; Cell biology; Chemistry; Medicine; Computational biology; Biology; Chemokine receptor; Internal medicine; Chemokine; Ecology","score_opus":0.07141959655627994,"score_gpt":0.36201445029498897,"score_spread":0.290594853738709,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2080702078","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.39411283,0.0018479706,0.00005897366,0.6013392,0.0021789763,0.00023937217,0.000015853135,0.000008952238,0.0001978445],"genre_scores_gemma":[0.011424199,0.010646054,0.0096763605,0.92104524,0.04263215,0.000012896447,0.00013352542,0.0002202329,0.0042093582],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99428713,0.0004630985,0.0035205511,0.0002442128,0.0012264829,0.0002585225],"domain_scores_gemma":[0.9914418,0.0025017408,0.0042419843,0.00039596533,0.0011305541,0.00028797344],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0033368836,0.00029011437,0.0014284638,0.0001429876,0.00007773544,0.00003386252,0.00028004285,0.0011662461,0.00051069865],"category_scores_gemma":[0.0059183426,0.00017457479,0.0011404719,0.00027561837,0.00043021794,0.000097534474,0.0000296475,0.002817113,0.000026681477],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014172414,0.0000650911,0.009470814,0.00017213474,0.00048274602,0.000032238142,0.000117768504,6.8423327e-7,0.0017919049,0.000006643158,0.98196924,0.0057490226],"study_design_scores_gemma":[0.0013967772,0.00065913855,0.0006997767,0.0007819544,0.00068639853,0.000085616564,0.000045685818,0.000029241472,0.025379773,0.0006567138,0.9694063,0.0001725889],"about_ca_topic_score_codex":0.000008619304,"about_ca_topic_score_gemma":8.504515e-7,"teacher_disagreement_score":0.3826886,"about_ca_system_score_codex":0.000079661295,"about_ca_system_score_gemma":0.0009633526,"threshold_uncertainty_score":0.9994834},"labels":[],"label_agreement":null},{"id":"W2081307885","doi":"10.1172/jci77193","title":"A brain network response to sham surgery","year":2014,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Pain Management and Placebo Effect","field":"Neuroscience","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Parkinsonfonden; Canada Research Chairs; Canadian Institutes of Health Research; National Parkinson Foundation; Fondation pour la Recherche sur Alzheimer; Michael J. Fox Foundation for Parkinson's Research","keywords":"Medicine; Neuroscience; Bioinformatics; Psychology; Biology","score_opus":0.18335597957122807,"score_gpt":0.389292070360443,"score_spread":0.20593609078921493,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2081307885","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.031840403,0.000021673055,0.0033703174,0.9599689,0.0039180997,0.0003357022,0.0000034258803,0.00003790781,0.00050357106],"genre_scores_gemma":[0.008997774,0.000019395266,0.0007075012,0.9658226,0.021643398,0.000006634973,0.000009398951,0.000045269437,0.002748075],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.97368187,0.022030374,0.0024233675,0.00043113867,0.001003473,0.00042978377],"domain_scores_gemma":[0.8732449,0.123539224,0.0023944813,0.00038726148,0.00013112108,0.0003030376],"candidate_categories":["metaresearch","research_integrity"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.0618353,0.0002838941,0.0010739255,0.00040299832,0.00010252918,0.00016828296,0.00058974384,0.00073961855,0.00007419134],"category_scores_gemma":[0.18314987,0.00023730201,0.00070185034,0.0005395952,0.00019800002,0.0002271939,0.00008370336,0.0028011268,0.00030639218],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00070558593,0.000011376512,0.0014871876,0.00005415557,0.000021987578,0.00043444036,0.000020393456,0.0002445754,0.00044484087,0.000022154569,0.9939435,0.0026098099],"study_design_scores_gemma":[0.00030057758,0.0003452501,0.0024313647,0.0005969503,0.00006367984,0.00003871586,8.556994e-7,0.0008160037,0.00020546223,0.0039161695,0.99102235,0.0002626056],"about_ca_topic_score_codex":0.0000018300872,"about_ca_topic_score_gemma":8.255805e-7,"teacher_disagreement_score":0.12131458,"about_ca_system_score_codex":0.00004840205,"about_ca_system_score_gemma":0.000343123,"threshold_uncertainty_score":0.99949944},"labels":[],"label_agreement":null},{"id":"W2081736209","doi":"10.1172/jci30525","title":"A distal single nucleotide polymorphism alters long-range regulation of the PU.1 gene in acute myeloid leukemia","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Acute Myeloid Leukemia Research","field":"Medicine","cited_by":114,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"National Cancer Institute; National Institutes of Health; Deutsche Forschungsgemeinschaft; Lymphoma Research Foundation","keywords":"Enhancer; Biology; Myeloid leukemia; Progenitor cell; Myeloid; Cancer research; Transcription factor; Molecular biology; Chromatin; Core binding factor; Leukemia; Single-nucleotide polymorphism; Cell biology; Gene; Genetics; Stem cell","score_opus":0.062083860409709604,"score_gpt":0.35878551316418006,"score_spread":0.29670165275447047,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2081736209","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9927657,0.00013173642,0.0011197408,0.0048049074,0.0005533387,0.00031702363,0.0000043654577,0.0000096040585,0.00029353655],"genre_scores_gemma":[0.99353915,0.00008001262,0.0043015652,0.0008225565,0.00089802366,0.0000012513138,0.00001044376,0.00002785856,0.00031911887],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9958736,0.0003039158,0.002369725,0.00020166575,0.0009505265,0.00030062607],"domain_scores_gemma":[0.99666554,0.00071069144,0.0014697476,0.0003544208,0.00043837697,0.00036124166],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004719915,0.00015415167,0.00060626987,0.00029478868,0.000051445648,0.000019290244,0.0002727862,0.00025684448,0.000033276865],"category_scores_gemma":[0.0024689105,0.00010700191,0.00037204454,0.0006465389,0.00060343393,0.0003158441,0.000079237056,0.0010329686,0.000007705567],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018965317,0.00024159598,0.6380952,0.0000688042,0.00019414394,0.00023422841,0.00045731678,0.00011623645,0.34620062,0.00013705956,0.0016405026,0.010717788],"study_design_scores_gemma":[0.0033915436,0.0005358729,0.9342441,0.0003754846,0.00016023275,0.00034008923,0.000060819388,0.0008563979,0.058705147,0.0010248978,0.00021084091,0.00009457723],"about_ca_topic_score_codex":0.000081286424,"about_ca_topic_score_gemma":0.00005787812,"teacher_disagreement_score":0.29614893,"about_ca_system_score_codex":0.00075323554,"about_ca_system_score_gemma":0.0010166231,"threshold_uncertainty_score":0.4487792},"labels":[],"label_agreement":null},{"id":"W2081840097","doi":"10.1172/jci69411","title":"Metabolic network as a progression biomarker of premanifest Huntington’s disease","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Genetic Neurodegenerative Diseases","field":"Neuroscience","cited_by":122,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Neurological Disorders and Stroke; University of California, San Diego; University of Toronto; CHDI Foundation; National Institutes of Health; Pfizer","keywords":"Medicine; Huntington's disease; Putamen; Biomarker; Metabolic network; Cohort; Disease; Internal medicine; Neuroimaging; Imaging biomarker; Oncology; Pathology; Bioinformatics; Magnetic resonance imaging; Biology; Radiology; Psychiatry","score_opus":0.09943676473839468,"score_gpt":0.3908154313540809,"score_spread":0.29137866661568623,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2081840097","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99676543,0.00020704209,0.000088524546,0.0015613913,0.00075943203,0.00035668456,0.0000029393243,0.000014874219,0.00024365893],"genre_scores_gemma":[0.9957611,0.00012750986,0.0019111454,0.0014731749,0.00059764547,0.000012811443,0.00000141981,0.00001969815,0.0000955249],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99610025,0.0010282517,0.0017037577,0.00027084793,0.00068240036,0.00021448545],"domain_scores_gemma":[0.99571157,0.00093440566,0.0020157609,0.00026410594,0.00045811225,0.00061603164],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.00097277755,0.00015256829,0.00042565324,0.00009321165,0.00007930639,0.00006686135,0.00031755678,0.00007289074,0.00015382981],"category_scores_gemma":[0.0146616725,0.00011291557,0.00029408606,0.00034135033,0.0004184398,0.0004454192,0.00008098073,0.00025116507,0.0000629936],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003325758,0.0006862997,0.49279386,0.00008420173,0.000044034397,0.000021567172,0.000094337,0.0010265831,0.47510993,0.0029844977,0.007777664,0.01904446],"study_design_scores_gemma":[0.00057896675,0.00026914699,0.68388057,0.00018170223,0.000099420395,0.0000068858694,0.00000838511,0.0011123006,0.2978905,0.015302962,0.00055633084,0.00011281522],"about_ca_topic_score_codex":0.000005211457,"about_ca_topic_score_gemma":6.0359724e-7,"teacher_disagreement_score":0.19108672,"about_ca_system_score_codex":0.0000071640957,"about_ca_system_score_gemma":0.0003608968,"threshold_uncertainty_score":0.9936383},"labels":[],"label_agreement":null},{"id":"W2082720266","doi":"10.1172/jci36625","title":"Iminoglycinuria and hyperglycinuria are discrete human phenotypes resulting from complex mutations in proline and glycine transporters","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Amino Acid Enzymes and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":116,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"National Health and Medical Research Council; Australian Research Council; Medical Research Council; University of Sydney; Université de Sherbrooke","keywords":"Genetics; Gene; Phenotype; Biology; Allele; Transporter; Amino acid; Amino acid transporter; Mendelian inheritance; Glycine; Mutation; Proline; Mutagenesis","score_opus":0.07802675084849116,"score_gpt":0.3483201242333176,"score_spread":0.27029337338482645,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082720266","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99796337,0.00082398794,0.00023262778,0.0007109917,0.0001105367,0.00008867779,0.000015597703,0.0000031173042,0.000051109266],"genre_scores_gemma":[0.99313694,0.00047630692,0.005256035,0.00033571877,0.0006415661,0.0000013073051,0.00008182681,0.000012113262,0.000058162415],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99854755,0.00011817617,0.0009150771,0.00019043352,0.000119504984,0.0001092625],"domain_scores_gemma":[0.99902403,0.00006038923,0.00055846333,0.00010238306,0.00009926129,0.00015548688],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004339724,0.000111542635,0.00033204682,0.000048857175,0.000069515954,0.000011474594,0.00006928073,0.00013425584,0.0000053177278],"category_scores_gemma":[0.00034250523,0.00009284379,0.00006779579,0.000057516554,0.00025157255,0.000019917517,0.000019134684,0.00020092909,3.3350196e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000438654,0.00008478917,0.64447355,0.00002242582,0.00008778065,0.000043296284,0.000816596,0.00012471851,0.3501943,0.000080547004,0.000610274,0.0030230717],"study_design_scores_gemma":[0.0026187957,0.0002561165,0.98860717,0.00006412495,0.000058585756,0.000041890857,0.00016536677,0.00019675975,0.0057379752,0.0007323886,0.001405224,0.000115574294],"about_ca_topic_score_codex":0.00007313714,"about_ca_topic_score_gemma":0.00018165167,"teacher_disagreement_score":0.34445634,"about_ca_system_score_codex":0.0000043735345,"about_ca_system_score_gemma":0.000052395542,"threshold_uncertainty_score":0.378606},"labels":[],"label_agreement":null},{"id":"W2083332835","doi":"10.1172/jci20726","title":"Complement-independent Ab-induced peroxide lysis of platelets requires 12-lipoxygenase and a platelet NADPH oxidase pathway","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Platelet Disorders and Treatments","field":"Medicine","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute on Drug Abuse; National Heart, Lung, and Blood Institute; National Institutes of Health; School of Medicine, New York University; York University; American Society of Hematology","keywords":"Platelet; NADPH oxidase; Chemistry; Reactive oxygen species; Platelet activation; Lipoxygenase; Complement system; Alternative complement pathway; Biochemistry; Enzyme; Cell biology; Biology; Immunology; Antibody","score_opus":0.09294358506154475,"score_gpt":0.364539668792146,"score_spread":0.27159608373060123,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083332835","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99674296,0.00026541928,0.000103806306,0.0022732937,0.00019887449,0.00028680897,0.000016354856,0.000013206598,0.000099287914],"genre_scores_gemma":[0.99490225,0.00033091227,0.0038429508,0.0006660136,0.00017361666,0.0000033781828,0.00003116096,0.00002117298,0.000028536666],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99666494,0.00013170978,0.0020601456,0.0002446681,0.00066109735,0.00023745402],"domain_scores_gemma":[0.99724126,0.00028230136,0.0014162333,0.00022298492,0.00029608846,0.00054113474],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011908521,0.00021269973,0.0010040302,0.00020073893,0.000074256306,0.000025588535,0.00010430468,0.00020958221,0.00004598684],"category_scores_gemma":[0.0009969764,0.00016163873,0.00030962718,0.0001560655,0.00018526454,0.00027964203,0.000040035033,0.00043942514,0.000008056464],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008707122,0.007930361,0.19335395,0.0009638014,0.006170035,0.016085092,0.003919429,0.0007073392,0.61543614,0.0030567246,0.0019039728,0.14176604],"study_design_scores_gemma":[0.068526745,0.011790497,0.47171262,0.0024314008,0.0014300316,0.0036149113,0.0011070622,0.0004453514,0.41391742,0.022682916,0.0016249235,0.0007161185],"about_ca_topic_score_codex":0.000120753124,"about_ca_topic_score_gemma":0.00007616026,"teacher_disagreement_score":0.27835867,"about_ca_system_score_codex":0.000081432285,"about_ca_system_score_gemma":0.00047277834,"threshold_uncertainty_score":0.6591436},"labels":[],"label_agreement":null},{"id":"W2083578935","doi":"10.1172/jci15990","title":"Thyroid functions of mouse cathepsins B, K, and L","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Thyroid Disorders and Treatments","field":"Medicine","cited_by":223,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Shriners Hospitals for Children; McGill University","keywords":"Thyroglobulin; Cathepsin; Cathepsin B; Chemistry; Proteolytic enzymes; Thyroid; Cathepsin D; Cathepsin H; Biochemistry; Proteolysis; Molecular biology; Endocrinology; Internal medicine; Biology; Enzyme; Medicine","score_opus":0.0756598671017931,"score_gpt":0.3674383006342089,"score_spread":0.29177843353241584,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083578935","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99705637,0.0006197029,0.00022365655,0.00081626145,0.00016237916,0.00007160004,0.0000023254145,0.0000038398216,0.0010438858],"genre_scores_gemma":[0.9953169,0.00029327287,0.0031893256,0.00029837995,0.00006829623,6.13423e-7,0.0000025462473,0.0000067258957,0.0008238953],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99887806,0.00008761422,0.0007436136,0.000069239424,0.00016057923,0.000060862134],"domain_scores_gemma":[0.99887097,0.00016891863,0.00048985775,0.000092408016,0.0001913963,0.00018643348],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053393457,0.00005844864,0.00029709842,0.00006604842,0.00002590283,0.0000054141983,0.000021019616,0.0000737223,0.00002175479],"category_scores_gemma":[0.0014841427,0.000041593845,0.00012220771,0.00008872662,0.00014594366,0.00009242761,0.000004599545,0.00017025284,0.000004717426],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022935282,0.0007752582,0.9796972,0.000034119257,0.00024714737,0.000015714973,0.00020785701,0.0000144656715,0.008795317,0.0023259313,0.0042505483,0.003407063],"study_design_scores_gemma":[0.014161381,0.0063665872,0.93627083,0.0002042935,0.00101973,0.00038190707,0.0006728244,0.00010813325,0.017553724,0.014135374,0.00895199,0.00017322077],"about_ca_topic_score_codex":0.0000070179835,"about_ca_topic_score_gemma":0.0000036763067,"teacher_disagreement_score":0.04342639,"about_ca_system_score_codex":0.000010198176,"about_ca_system_score_gemma":0.00016860504,"threshold_uncertainty_score":0.17767647},"labels":[],"label_agreement":null},{"id":"W2085710584","doi":"10.1172/jci34470","title":"A skewed view of X chromosome inactivation","year":2007,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Genetic and Clinical Aspects of Sex Determination and Chromosomal Abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":123,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"University of California, San Francisco; National Institutes of Health","keywords":"X-inactivation; X chromosome; Skewed X-inactivation; Genetics; Biology; Somatic cell; XIST; Chromosome; Locus (genetics); Dosage compensation; Gene","score_opus":0.05276258147147096,"score_gpt":0.3493210499933569,"score_spread":0.29655846852188594,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2085710584","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.858636,0.0012547347,0.0008704,0.13489224,0.0021281075,0.00030372676,0.000030821753,0.00000992703,0.001874031],"genre_scores_gemma":[0.43571606,0.0027532063,0.0044359216,0.5290661,0.023248632,0.0000067662845,0.0005446769,0.0000874238,0.0041411985],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99587864,0.00032843722,0.0027826712,0.00025023008,0.00056639663,0.00019365274],"domain_scores_gemma":[0.9952025,0.00031070286,0.0031352085,0.0002820356,0.0009343276,0.00013524617],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016724294,0.00022960802,0.0007686452,0.00012903026,0.000035075474,0.00002168584,0.0003527542,0.0012537045,0.00007388867],"category_scores_gemma":[0.0016511283,0.00019102174,0.0005712969,0.00013000483,0.0004197902,0.0000149805,0.000062805186,0.0011212247,0.000007835349],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000329184,0.00027852005,0.003888676,0.0006848375,0.00053921534,0.000109018656,0.000080525584,0.000015724292,0.020428132,0.000097176584,0.94054705,0.033001915],"study_design_scores_gemma":[0.0013644301,0.002868422,0.007432523,0.0004961683,0.00019303279,0.00010797115,0.00006022414,0.000013455255,0.055563092,0.0023991086,0.9291514,0.000350149],"about_ca_topic_score_codex":0.000004434481,"about_ca_topic_score_gemma":0.0000021389385,"teacher_disagreement_score":0.42291993,"about_ca_system_score_codex":0.000016057656,"about_ca_system_score_gemma":0.00041478145,"threshold_uncertainty_score":0.96697176},"labels":[],"label_agreement":null},{"id":"W2085832579","doi":"10.1172/jci65952","title":"Osteocalcin regulates murine and human fertility through a pancreas-bone-testis axis","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Hormonal and reproductive studies","field":"Medicine","cited_by":280,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute","funders":"National Institutes of Health; Canadian Diabetes Association; Eunice Kennedy Shriver National Institute of Child Health and Human Development; Sanofi","keywords":"Osteocalcin; Endocrinology; Internal medicine; Biology; Leydig cell; Luteinizing hormone; Testosterone (patch); Osteoblast; Hormone; Medicine; Alkaline phosphatase","score_opus":0.09989158293980625,"score_gpt":0.3939814925432493,"score_spread":0.29408990960344306,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2085832579","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9860673,0.0012141381,0.000024212028,0.011627338,0.00016684379,0.00022474346,9.255967e-7,0.000016590117,0.0006579124],"genre_scores_gemma":[0.99436677,0.00023034915,0.003561131,0.00051327166,0.0008400275,0.000004387942,0.000003093913,0.000010212311,0.0004707905],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99784356,0.00017055459,0.0013050056,0.00022530116,0.00031281298,0.00014278447],"domain_scores_gemma":[0.997888,0.00035153635,0.0006036899,0.0001837599,0.00070814183,0.00026484177],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012062613,0.0001326452,0.0006976074,0.000048727816,0.00010002673,0.000021871027,0.000051841118,0.00011468621,0.000065117136],"category_scores_gemma":[0.0038159403,0.00008320539,0.00017438216,0.00013141983,0.0006753245,0.00033354206,0.00005326012,0.0004302872,0.000016356964],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035189386,0.00037083885,0.9367276,0.00016734871,0.0003253617,0.000046647725,0.0005908584,0.0000024395804,0.027758915,0.00063907244,0.004077117,0.028941933],"study_design_scores_gemma":[0.0011909617,0.0012310132,0.955782,0.00024304661,0.00014716215,0.00010698184,0.00015028128,0.00002710527,0.005100478,0.035328753,0.00060938526,0.00008286136],"about_ca_topic_score_codex":0.00017591726,"about_ca_topic_score_gemma":0.000008529214,"teacher_disagreement_score":0.03468968,"about_ca_system_score_codex":0.00002125686,"about_ca_system_score_gemma":0.00007341491,"threshold_uncertainty_score":0.45683125},"labels":[],"label_agreement":null},{"id":"W2086051048","doi":"10.1172/jci40987","title":"Right to reform","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Healthcare Policy and Management","field":"Economics, Econometrics and Finance","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"University of Pennsylvania","keywords":"Medicine","score_opus":0.1970992928036306,"score_gpt":0.4012697615168239,"score_spread":0.20417046871319333,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2086051048","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.65865886,0.00025698487,0.0059500155,0.27314126,0.0016201911,0.000181344,0.000007132942,0.000017449072,0.060166746],"genre_scores_gemma":[0.97047824,0.00010080456,0.0057173185,0.022339758,0.00084397185,6.82934e-7,9.653245e-7,0.000004147519,0.00051412376],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9979668,0.000028361123,0.0017286575,0.000105696454,0.000047261325,0.00012321626],"domain_scores_gemma":[0.9986163,0.00005272801,0.0008454646,0.00013005399,0.0000667352,0.00028872135],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0027580908,0.000054812688,0.00032085905,0.00016533,0.000033622055,0.000025942798,0.00014423055,0.000076734876,0.00006143014],"category_scores_gemma":[0.0010080882,0.000049534803,0.00012741676,0.00016165232,0.00002273409,0.00021824565,0.000011905657,0.00020648318,0.00027200885],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003586621,0.00008405594,0.00799345,0.000011349332,0.000025494874,0.000008689996,0.00018413227,0.00004672254,0.000010798523,0.95366824,0.015566093,0.022365086],"study_design_scores_gemma":[0.0003704774,0.00064104755,0.17391455,0.00003425255,0.0000041550875,0.0000037064833,0.000013963878,0.0001506212,0.00009723767,0.45092964,0.37375855,0.00008179704],"about_ca_topic_score_codex":0.000093177834,"about_ca_topic_score_gemma":0.000013122479,"teacher_disagreement_score":0.5027386,"about_ca_system_score_codex":0.00008249278,"about_ca_system_score_gemma":0.000039499097,"threshold_uncertainty_score":0.34962144},"labels":[],"label_agreement":null},{"id":"W2086714780","doi":"10.1172/jci59755","title":"The mechanism underlying acetaminophen-induced hepatotoxicity in humans and mice involves mitochondrial damage and nuclear DNA fragmentation","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Drug-Induced Hepatotoxicity and Protection","field":"Pharmacology, Toxicology and Pharmaceutics","cited_by":763,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Environmental Health Sciences; McGill University; National Institute of Diabetes and Digestive and Kidney Diseases; National Institute on Alcohol Abuse and Alcoholism; National Institutes of Health; National Center for Research Resources; National Institute of General Medical Sciences","keywords":"Acetaminophen; DNA fragmentation; Fragmentation (computing); Mitochondrial DNA; Nuclear DNA; Toxicity; Apoptosis; DNA damage; Programmed cell death; Glutamate dehydrogenase; Mitochondrial toxicity; Mitochondrion; Liver injury; Biology; Pharmacology; Internal medicine; Medicine; Glutamate receptor; DNA; Biochemistry","score_opus":0.32416315730584017,"score_gpt":0.48222312165208997,"score_spread":0.1580599643462498,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2086714780","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949006,0.00016845357,0.000102943995,0.0018458137,0.0024585219,0.0003784914,0.0000025958043,0.000016119991,0.00012649222],"genre_scores_gemma":[0.99621946,0.0005743996,0.0007253106,0.001617535,0.0008142827,0.000008549927,0.000002208918,0.000016283637,0.000021954354],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9964941,0.0016858467,0.001137996,0.00017252761,0.00022554303,0.00028396232],"domain_scores_gemma":[0.9971007,0.0015024148,0.0008546016,0.00009626727,0.000105397325,0.00034057954],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004866537,0.00016196043,0.0003345672,0.000117878146,0.00047467378,0.00007353599,0.00014065232,0.00048527334,0.000020409741],"category_scores_gemma":[0.0010684245,0.00013000846,0.0000873289,0.00015676836,0.00028889763,0.0007852876,0.00006096418,0.0015500237,0.000006699993],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007456988,0.0003626716,0.11046934,0.000087046916,0.00018146231,0.0000109757375,0.0076303035,0.000025816695,0.8401169,0.016777363,0.000244223,0.023348168],"study_design_scores_gemma":[0.012815398,0.0018809556,0.6660059,0.00035089112,0.00060575514,0.00012819115,0.006030383,0.011853527,0.18491913,0.10345062,0.0110267205,0.0009325098],"about_ca_topic_score_codex":0.00003420276,"about_ca_topic_score_gemma":0.000090628346,"teacher_disagreement_score":0.6551978,"about_ca_system_score_codex":0.00006870202,"about_ca_system_score_gemma":0.00007717091,"threshold_uncertainty_score":0.6734168},"labels":[],"label_agreement":null},{"id":"W2087185853","doi":"10.1172/jci34316","title":"Serotype-dependent packaging of large genes in adeno-associated viral vectors results in effective gene delivery in mice","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":284,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; James N. Kirby Foundation; National Eye Institute; National Institutes of Health; Research to Prevent Blindness; F. M. Kirby Foundation","keywords":"ABCA4; Biology; Genetic enhancement; Transduction (biophysics); Gene delivery; Retinal degeneration; Gene; Capsid; Adeno-associated virus; Retinitis pigmentosa; Vector (molecular biology); Viral vector; Virology; Genetics; Recombinant DNA","score_opus":0.04523876992661468,"score_gpt":0.365887957769594,"score_spread":0.3206491878429793,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2087185853","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99867797,0.00076461094,0.000014193083,0.00017963702,0.00012378285,0.00020810371,0.000012675328,0.000001951161,0.000017079079],"genre_scores_gemma":[0.9985024,0.00091951084,0.0002028351,0.00015604676,0.00015177375,0.0000049314353,0.000026696498,0.000014879134,0.00002092778],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99676526,0.0010778379,0.0013841522,0.0002182557,0.00032449976,0.00022998526],"domain_scores_gemma":[0.99863464,0.00024392575,0.00064733106,0.00013646673,0.00023490698,0.000102728176],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003953314,0.000115429815,0.00038656,0.00023529954,0.000022494702,0.00000577106,0.00018976427,0.00026201562,0.000002718922],"category_scores_gemma":[0.0021032728,0.0001101304,0.00012525788,0.00028256667,0.0001214695,0.000019484913,0.000057535737,0.00048277047,0.0000018927514],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0032976072,0.00024280458,0.47163132,0.000008810786,0.000038088758,0.00005141007,0.00017788995,0.0012521631,0.52249986,7.8174804e-7,0.000040651852,0.0007586103],"study_design_scores_gemma":[0.0040949984,0.0017513453,0.5057146,0.00008984148,0.0000058345654,0.000007764419,0.000037156,0.00025070284,0.48787034,0.00008401856,0.000012890807,0.00008050532],"about_ca_topic_score_codex":0.00011094979,"about_ca_topic_score_gemma":0.0023342601,"teacher_disagreement_score":0.034629516,"about_ca_system_score_codex":0.0000860965,"about_ca_system_score_gemma":0.0003655797,"threshold_uncertainty_score":0.44909877},"labels":[],"label_agreement":null},{"id":"W2087351164","doi":"10.1172/jci43008","title":"MTORC1 regulates cardiac function and myocyte survival through 4E-BP1 inhibition in mice","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"PI3K/AKT/mTOR signaling in cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":335,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research; University of California, San Diego; National Cancer Institute; National Institutes of Health; Fondazione Cariplo; National Heart, Lung, and Blood Institute; Foundation for Cardiovascular Research; Howard Hughes Medical Institute","keywords":"mTORC1; PI3K/AKT/mTOR pathway; Autophagy; Mechanistic target of rapamycin; Myocyte; Pressure overload; mTORC2; Heart failure; Biology; Eukaryotic initiation factor; Cell biology; Internal medicine; Muscle hypertrophy; Apoptosis; Endocrinology; Translation (biology); Signal transduction; Medicine; Cardiac hypertrophy; Gene; Messenger RNA; Biochemistry","score_opus":0.040299407747075265,"score_gpt":0.338118091993733,"score_spread":0.29781868424665775,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2087351164","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960304,0.0004363841,0.00061586587,0.0005787472,0.0020973806,0.00008254739,0.000004057698,0.0000049412524,0.000149695],"genre_scores_gemma":[0.9954689,0.00029329114,0.001504546,0.00042901695,0.0022083465,0.0000027253175,0.00002495362,0.000015314306,0.000052868407],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983133,0.0002413461,0.00088181376,0.0002157566,0.0002160049,0.00013177458],"domain_scores_gemma":[0.9987712,0.00014505425,0.0005761194,0.00014153529,0.0002448031,0.00012132232],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018893024,0.00011530372,0.0002811938,0.00004605015,0.00003964935,0.000031895997,0.00006550815,0.00035585678,0.000010004421],"category_scores_gemma":[0.0012553256,0.000105080915,0.00013548938,0.000100946774,0.0002327102,0.00003725274,0.00003681442,0.0005045839,0.0000026014832],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027497578,0.000040411454,0.075645715,0.000016492708,0.00004703588,0.000002430822,0.000041452073,0.00010983321,0.9209616,0.00031168008,0.0012489482,0.0012994185],"study_design_scores_gemma":[0.0025915573,0.0013364744,0.34341234,0.00015941185,0.00011894259,0.000037922688,0.00007514152,0.00018238758,0.61587834,0.020126626,0.015754638,0.0003262287],"about_ca_topic_score_codex":0.000021862441,"about_ca_topic_score_gemma":0.000052147203,"teacher_disagreement_score":0.30508327,"about_ca_system_score_codex":0.00001501595,"about_ca_system_score_gemma":0.00018380057,"threshold_uncertainty_score":0.42850754},"labels":[],"label_agreement":null},{"id":"W2087962053","doi":"10.1172/jci29528","title":"Elevated sensitivity to diet-induced obesity and insulin resistance in mice lacking 4E-BP1 and 4E-BP2","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"PI3K/AKT/mTOR signaling in cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":332,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research; McGill University","keywords":"Insulin resistance; Endocrinology; Internal medicine; Adipose tissue; PI3K/AKT/mTOR pathway; P70-S6 Kinase 1; Ribosomal protein s6; Lipolysis; Biology; Protein kinase B; Adipogenesis; Insulin; Signal transduction; Medicine; Cell biology","score_opus":0.05349405494463537,"score_gpt":0.3604036181771676,"score_spread":0.3069095632325322,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2087962053","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99705297,0.00052137376,0.0010510992,0.00095668284,0.0002444707,0.00010904765,0.0000029121381,0.0000043467035,0.00005708843],"genre_scores_gemma":[0.9931611,0.00017566675,0.004878496,0.0012168585,0.00052741164,7.590604e-7,0.0000042635816,0.000012213723,0.000023231769],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99812686,0.00029618913,0.0009257688,0.00026153924,0.00020347301,0.00018618561],"domain_scores_gemma":[0.9985035,0.00035929473,0.0004821346,0.00012509481,0.00025673117,0.00027321852],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0046488815,0.00012172074,0.00030535134,0.00007331424,0.000047283287,0.000028434526,0.000076002936,0.00026680387,0.000001362942],"category_scores_gemma":[0.0031540808,0.00011650005,0.000058688882,0.0001635016,0.00012970396,0.000018780065,0.00006431541,0.00038140203,9.912836e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010527894,0.00006305616,0.15494063,0.000029101038,0.00003809991,0.00003830883,0.00011326355,0.000031739517,0.8406464,0.0000513802,0.00025133602,0.0027439077],"study_design_scores_gemma":[0.0013656939,0.0007140284,0.72574973,0.00022945405,0.000029003288,0.000022071612,0.000042146516,0.00010023162,0.2692516,0.0011613475,0.0011370293,0.00019762098],"about_ca_topic_score_codex":0.000022673918,"about_ca_topic_score_gemma":0.0006126323,"teacher_disagreement_score":0.57139474,"about_ca_system_score_codex":0.00003368022,"about_ca_system_score_gemma":0.00013991048,"threshold_uncertainty_score":0.4750734},"labels":[],"label_agreement":null},{"id":"W2090490099","doi":"10.1172/jci72829","title":"Randomized trial of the anti-FGF23 antibody KRN23 in X-linked hypophosphatemia","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Parathyroid Disorders and Treatments","field":"Medicine","cited_by":317,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Center for Advancing Translational Sciences; National Center for Research Resources; School of Medicine, Indiana University; Yale University; National Institutes of Health; Kyowa Hakko Kirin; National Institute of Diabetes and Digestive and Kidney Diseases; McGill University; Johns Hopkins University","keywords":"Hypophosphatemia; Internal medicine; Endocrinology; Medicine; Tolerability; Placebo; PHEX; Reabsorption; Kidney; Rickets; Vitamin D and neurology; Adverse effect; Pathology","score_opus":0.06984510509781217,"score_gpt":0.4148532662454616,"score_spread":0.34500816114764943,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2090490099","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99505484,0.00042795905,0.00010080517,0.0023855292,0.0008618806,0.0005723993,7.581647e-7,0.000003861607,0.00059198076],"genre_scores_gemma":[0.9980494,0.0003627444,0.0006515521,0.00047534925,0.00033969837,0.0000034235268,0.0000040865975,0.000008820304,0.000104955056],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9964159,0.000784229,0.0021789505,0.000112638154,0.00039719904,0.000111081914],"domain_scores_gemma":[0.9965214,0.0012591202,0.0016726437,0.00020557275,0.00020194757,0.0001393094],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0045562824,0.000105933104,0.0011663254,0.00008561623,0.000025767986,0.000009158169,0.00011759593,0.00015789285,0.0000063419634],"category_scores_gemma":[0.009585816,0.000057060628,0.0005389348,0.0002219185,0.00032569192,0.000101461264,0.00001887137,0.00037525606,0.000005872477],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.592594,0.0013916214,0.39714968,0.00002818746,0.00032036408,0.000016211889,0.00020846496,0.00010337616,0.0037659882,0.0010231353,0.0015439801,0.0018549882],"study_design_scores_gemma":[0.79773253,0.00073431473,0.19105795,0.00014220878,0.0002574116,0.000010024105,0.000016010277,0.0010133706,0.0011530453,0.007641219,0.00019241245,0.00004951963],"about_ca_topic_score_codex":0.000027073504,"about_ca_topic_score_gemma":0.000002987132,"teacher_disagreement_score":0.20609172,"about_ca_system_score_codex":0.00001851997,"about_ca_system_score_gemma":0.00027062214,"threshold_uncertainty_score":0.9987569},"labels":[],"label_agreement":null},{"id":"W2090952129","doi":"10.1172/jci21128","title":"Assessing risk is the business of prion disease research","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Prion Diseases and Protein Misfolding","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Disease; Medicine; Virology; Business; Computational biology; Biology; Pathology","score_opus":0.16137614360186936,"score_gpt":0.47228510823407344,"score_spread":0.3109089646322041,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2090952129","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9908147,0.0030238484,0.002075997,0.0037803345,0.00017736934,0.00009846443,0.0000040616706,0.0000013872934,0.000023863295],"genre_scores_gemma":[0.99377424,0.0035006655,0.0016659102,0.0003636758,0.0006708255,0.000001571015,0.0000052008736,0.000007811414,0.00001008728],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998212,0.00045137177,0.00073367293,0.00012303436,0.00037086033,0.00010908248],"domain_scores_gemma":[0.9978858,0.00015912032,0.0007385506,0.00021967637,0.00081161526,0.00018519568],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0038408542,0.00006150465,0.0001453238,0.00004436396,0.0001148787,0.000051255254,0.0002180006,0.000093145,0.000008725853],"category_scores_gemma":[0.00676788,0.00004046481,0.00017264439,0.00019828204,0.00029678977,0.000023143208,0.00006751707,0.0002961662,0.000001939119],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016929468,0.00072279305,0.44548008,0.00027564768,0.00038024422,0.00003052795,0.00036400167,0.006737147,0.2557713,0.0014583998,0.005659136,0.28142777],"study_design_scores_gemma":[0.00148145,0.00038930686,0.8856653,0.00042073207,0.0001124766,0.000008189906,0.00014273451,0.00013849804,0.06030352,0.043688603,0.007523759,0.00012542242],"about_ca_topic_score_codex":0.000017203209,"about_ca_topic_score_gemma":0.0000018918649,"teacher_disagreement_score":0.44018522,"about_ca_system_score_codex":0.000011645115,"about_ca_system_score_gemma":0.00072625076,"threshold_uncertainty_score":0.8102274},"labels":[],"label_agreement":null},{"id":"W2091242368","doi":"10.1172/jci57100","title":"Breast cancer — one term, many entities?","year":2011,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"HER2/EGFR in Cancer Research","field":"Medicine","cited_by":230,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"McGill University Health Centre; McGill University","keywords":"Breast cancer; Cancer; Breast tumor; Disease; Computational biology; Bioinformatics; Medicine; Tumor heterogeneity; Biology; Cancer research; Pathology; Internal medicine","score_opus":0.4923396356444193,"score_gpt":0.5576649504711761,"score_spread":0.06532531482675685,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091242368","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00032363928,0.9944799,0.000027733568,0.0011736498,0.001960803,0.0005799041,0.000059187616,0.000018379176,0.0013768089],"genre_scores_gemma":[0.00004250942,0.98967093,0.0009831282,0.00046381925,0.0063121286,0.000030998246,0.000025528967,0.000080048914,0.0023909071],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9936466,0.00072093756,0.003961255,0.00032607443,0.0010058901,0.00033923588],"domain_scores_gemma":[0.9938841,0.0006151853,0.0032004179,0.0004680142,0.00093709206,0.00089520577],"candidate_categories":["research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0038523958,0.00032546086,0.0032387935,0.00039241242,0.000049049195,0.000054024265,0.00043715708,0.00074818986,0.0019671582],"category_scores_gemma":[0.0012391527,0.00023593886,0.0013622643,0.00037889657,0.0005203221,0.00021243886,0.00009528938,0.0028942206,0.00019079365],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008333334,0.00018025769,0.0024850876,0.013481006,0.0006351708,0.00008628201,0.000037543705,7.27137e-8,0.0000011139333,0.0001898431,0.016338397,0.96648186],"study_design_scores_gemma":[0.00083060167,0.0004880415,0.0054179765,0.073517255,0.002561336,0.0009940295,0.0000062694503,0.000003160471,0.0000039711963,0.00056485506,0.9153983,0.0002141975],"about_ca_topic_score_codex":0.00005452657,"about_ca_topic_score_gemma":0.0000090969115,"teacher_disagreement_score":0.9662677,"about_ca_system_score_codex":0.00038003974,"about_ca_system_score_gemma":0.0052570663,"threshold_uncertainty_score":0.99940616},"labels":[],"label_agreement":null},{"id":"W2091379168","doi":"10.1172/jci46043","title":"Circadian rhythms, sleep, and metabolism","year":2011,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Circadian rhythm and melatonin","field":"Neuroscience","cited_by":719,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Sleep & Circadian Network","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; National Institute on Aging; National Institutes of Health","keywords":"Circadian rhythm; Biology; Bacterial circadian rhythms; Neuroscience; Circadian clock; Sleep (system call); CLOCK; Energy homeostasis; Light effects on circadian rhythm; Chronobiology; Obesity; Endocrinology; Computer science","score_opus":0.222852640695602,"score_gpt":0.40343155026654975,"score_spread":0.18057890957094774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091379168","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0012962251,0.9947654,0.000027338861,0.00012596467,0.0026004182,0.0002732965,0.000013214278,0.00001761504,0.0008805426],"genre_scores_gemma":[0.00026336132,0.9958816,0.00060024194,0.00067632686,0.0022542402,0.0000054561156,0.0000026639211,0.000048401853,0.0002676921],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99490064,0.001068316,0.003021598,0.0004079075,0.00033679086,0.00026472952],"domain_scores_gemma":[0.99376744,0.0015025903,0.0035085266,0.00030460884,0.00011357358,0.0008032888],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0022280926,0.00032825736,0.002290605,0.0003376678,0.0000859748,0.000081377315,0.00031644787,0.0006378885,0.00007124254],"category_scores_gemma":[0.0063479906,0.00024612923,0.00083235383,0.0003454824,0.0005097347,0.00041754977,0.00006438661,0.0015758732,0.000121230696],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005814978,0.000030597315,0.000036987276,0.00092868786,0.000042014017,0.00009034149,0.000086751264,1.13241065e-7,0.000005032054,0.02153299,0.0006458911,0.9765948],"study_design_scores_gemma":[0.00034596873,0.000078725905,0.0004878466,0.0030024403,0.00071407546,0.0012678918,0.00000293014,0.0000066361467,0.00007983965,0.0026033258,0.9911676,0.00024271203],"about_ca_topic_score_codex":0.0000027184908,"about_ca_topic_score_gemma":8.3693345e-7,"teacher_disagreement_score":0.9905217,"about_ca_system_score_codex":0.000028529046,"about_ca_system_score_gemma":0.00065703626,"threshold_uncertainty_score":0.9999991},"labels":[],"label_agreement":null},{"id":"W2091530696","doi":"10.1172/jci21003","title":"Nitrate tolerance, oxidative stress, and mitochondrial function: another worrisome chapter on the effects of organic nitrates","year":2004,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Nitric Oxide and Endothelin Effects","field":"Medicine","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Oxidative stress; Nitrate; In vivo; Aldehyde dehydrogenase; Mitochondrion; Chemistry; Denitrification; Oxidative phosphorylation; Function (biology); Biochemistry; Enzyme; Biology; Cell biology; Organic chemistry; Biotechnology; Nitrogen","score_opus":0.035290181659899916,"score_gpt":0.2968640424508075,"score_spread":0.2615738607909076,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091530696","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8103687,0.0010559596,0.00020868285,0.18392476,0.0032256623,0.00084084796,0.000011290219,0.000020007008,0.00034409921],"genre_scores_gemma":[0.34824398,0.0013622504,0.0007811558,0.62049544,0.027759891,0.000019839703,0.00004362725,0.0001381218,0.0011556586],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.996991,0.00042354452,0.0014798058,0.00026513592,0.00063848356,0.0002020723],"domain_scores_gemma":[0.9935179,0.0037413123,0.0019013123,0.00029111377,0.00041576376,0.00013259756],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0006548871,0.0003139096,0.0010713558,0.00019266814,0.0000599646,0.000035313362,0.00014761688,0.0007220706,0.0001218682],"category_scores_gemma":[0.002542628,0.00018452185,0.00036238882,0.00020342706,0.00047921672,0.00014648815,0.000020824458,0.0027538743,0.000023399833],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00924508,0.0012682928,0.06335835,0.007667701,0.0056878147,0.0022824572,0.0011256909,0.00008638065,0.09686217,0.001190692,0.80445683,0.006768511],"study_design_scores_gemma":[0.064301275,0.06541375,0.16284908,0.07594625,0.014172649,0.0010452464,0.00030240268,0.0001704645,0.37037557,0.12446569,0.118001156,0.0029564789],"about_ca_topic_score_codex":0.000008325311,"about_ca_topic_score_gemma":0.0000033236804,"teacher_disagreement_score":0.6864557,"about_ca_system_score_codex":0.00003849601,"about_ca_system_score_gemma":0.0003367605,"threshold_uncertainty_score":0.9995468},"labels":[],"label_agreement":null},{"id":"W2091899323","doi":"10.1172/jci22486","title":"Ikaros integrates endocrine and immune system development","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Neuroblastoma Research and Treatments","field":"Medicine","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network; Ontario Institute for Cancer Research; Sunnybrook Health Science Centre; Health Sciences Centre; Mount Sinai Hospital","funders":"Canadian Institutes of Health Research","keywords":"Immune system; Hormone; Biology; Glucocorticoid; Lymphopoiesis; Endocrine system; Population; Haematopoiesis; Endocrinology; Transcription factor; Immunology; Proopiomelanocortin; Internal medicine; Medicine; Stem cell; Gene; Cell biology; Genetics","score_opus":0.0809858429001423,"score_gpt":0.4030542107000146,"score_spread":0.32206836779987236,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091899323","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961143,0.00040427461,0.00006546657,0.0027978239,0.000121912315,0.00012326462,4.891151e-7,0.000012581013,0.00035985015],"genre_scores_gemma":[0.9871169,0.00009617146,0.011883127,0.00020505302,0.00035718762,0.0000024035369,0.000003011168,0.00000823492,0.0003279383],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9983005,0.00010210607,0.0010667813,0.00009695723,0.00030989875,0.00012374486],"domain_scores_gemma":[0.99867886,0.00023986773,0.0003815663,0.00008265293,0.00024356441,0.00037346504],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00075359445,0.00008283882,0.00035335714,0.00009952683,0.00004174181,0.000021123653,0.000047081572,0.000045154087,0.000015467605],"category_scores_gemma":[0.00084731664,0.00005406629,0.00008582766,0.00008243455,0.000105993386,0.00015403873,0.000023253728,0.0003296164,0.000032421074],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025980338,0.00126459,0.42803955,0.00056868483,0.0010983289,0.0012684438,0.0005428761,0.000019611314,0.04153621,0.0020432363,0.0024744754,0.5185459],"study_design_scores_gemma":[0.00789812,0.0023950264,0.744492,0.0012208496,0.00016325685,0.0020706593,0.00017750448,0.0007885212,0.22997369,0.0002592315,0.010434035,0.00012708797],"about_ca_topic_score_codex":0.000002937588,"about_ca_topic_score_gemma":0.0000028117336,"teacher_disagreement_score":0.51841885,"about_ca_system_score_codex":0.000066529676,"about_ca_system_score_gemma":0.00029250747,"threshold_uncertainty_score":0.22047594},"labels":[],"label_agreement":null},{"id":"W2092503047","doi":"10.1172/jci63186","title":"Pathogenesis of follicular lymphoma","year":2012,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":309,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"National Cancer Institute; BC Cancer Agency; Canadian Institutes of Health Research; Ligue Genevoise Contre le Cancer; Terry Fox Foundation","keywords":"Follicular lymphoma; Biology; Germinal center; Cancer research; Neoplastic transformation; Immune system; Lymphoma; Stromal cell; Immunology; Tumor microenvironment; Crosstalk; Malignant transformation; B cell; Gene; Genetics; Antibody; Carcinogenesis","score_opus":0.22437060783493384,"score_gpt":0.4434498753022194,"score_spread":0.21907926746728557,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092503047","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0067595905,0.9917711,0.000010099888,0.00016048948,0.0007674919,0.00034211617,0.000012471177,0.0000060270854,0.00017062588],"genre_scores_gemma":[0.0014877133,0.9942309,0.002519008,0.00013146507,0.0014743402,0.000011616279,0.00003956559,0.000033288474,0.00007208047],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9949211,0.00043315874,0.00375518,0.00016797039,0.00055784016,0.00016476662],"domain_scores_gemma":[0.9933436,0.0009251305,0.004499791,0.00032380244,0.00040105253,0.00050664233],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018701447,0.00027006448,0.0034434733,0.00020527821,0.000022066255,0.000010311528,0.00013613414,0.00053233415,0.00005356368],"category_scores_gemma":[0.001155449,0.00016448449,0.002351478,0.00025279622,0.00015047016,0.00010863444,0.000032854183,0.00019656563,0.00003855006],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025485146,0.00083965994,0.009011557,0.0043796217,0.000947556,0.00008461891,0.000012521816,1.3699288e-7,0.0000015117091,0.00012850531,0.0005487775,0.98402005],"study_design_scores_gemma":[0.0020287102,0.0009559385,0.023425853,0.018744742,0.015088618,0.00062418706,0.0000046003674,0.0000017212499,0.0000367687,0.00015510392,0.9387823,0.0001515029],"about_ca_topic_score_codex":0.000005332789,"about_ca_topic_score_gemma":4.5470972e-7,"teacher_disagreement_score":0.98386854,"about_ca_system_score_codex":0.00014449151,"about_ca_system_score_gemma":0.0013669805,"threshold_uncertainty_score":0.6707483},"labels":[],"label_agreement":null},{"id":"W2092820206","doi":"10.1172/jci18637","title":"Dysregulated Sonic hedgehog signaling and medulloblastoma consequent to IFN-α–stimulated STAT2-independent production of IFN-γ in the brain","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Hedgehog Signaling Pathway Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":73,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"School of Medicine, New York University; National Institutes of Health; York University; Multiple Sclerosis Society; National Institute of General Medical Sciences; National Institute of Mental Health","keywords":"STAT2; STAT protein; STAT1; Biology; Sonic hedgehog; Cancer research; Medulloblastoma; STAT4; Signal transduction; STAT6; Cell biology; Immune system; STAT3; Immunology; stat; Interleukin 4","score_opus":0.05882957799828798,"score_gpt":0.35636262239180294,"score_spread":0.29753304439351497,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092820206","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958346,0.00040542983,0.000550252,0.0025366235,0.00036407475,0.00027755162,0.0000022653082,0.000003640535,0.00002557784],"genre_scores_gemma":[0.99751264,0.000056918743,0.0014512637,0.0007300725,0.00017875881,0.000004232855,0.000005413976,0.000013601158,0.000047086673],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99695873,0.0009003983,0.0013751674,0.00025293307,0.00033373805,0.00017903869],"domain_scores_gemma":[0.99823314,0.00031033464,0.0007132158,0.00019705395,0.00040889403,0.00013736109],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0048893737,0.00014589677,0.00036890298,0.0001114163,0.00005876789,0.000021078326,0.00014836414,0.00017586077,0.000004357854],"category_scores_gemma":[0.007869279,0.00010822797,0.0001129044,0.00024675627,0.0002583759,0.000012667403,0.000034022174,0.00029322522,0.0000013442026],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032429735,0.00018653959,0.025637094,0.000052547075,0.00017920064,0.000018907469,0.0011687531,0.009897802,0.9589762,0.0001618329,0.0015522088,0.0018446072],"study_design_scores_gemma":[0.0031462128,0.0035675068,0.112044975,0.00052279065,0.0001478768,0.00024043232,0.0014731376,0.00040942128,0.8714989,0.0032984188,0.0032873177,0.0003630274],"about_ca_topic_score_codex":0.000009914266,"about_ca_topic_score_gemma":0.00004839696,"teacher_disagreement_score":0.08747733,"about_ca_system_score_codex":0.000023454764,"about_ca_system_score_gemma":0.0003087908,"threshold_uncertainty_score":0.94208306},"labels":[],"label_agreement":null},{"id":"W2093116780","doi":"10.1172/jci32479","title":"Angiogenic factors FGF2 and PDGF-BB synergistically promote murine tumor neovascularization and metastasis","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Angiogenesis and VEGF in Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":284,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Vetenskapsrådet; Karolinska Institutet; European Commission; Rosalind Franklin University of Medicine and Science; Swedish Cancer Foundation; University of Toronto; Eli Lilly and Company","keywords":"Angiogenesis; Platelet-derived growth factor receptor; Metastasis; Neovascularization; Cancer research; Mural cell; Downregulation and upregulation; Fibroblast growth factor; Platelet-derived growth factor; Biology; Tumor progression; Growth factor; Medicine; Endocrinology; Internal medicine; Cancer; Receptor; Vascular smooth muscle; Biochemistry","score_opus":0.0413639383118473,"score_gpt":0.34187791536392365,"score_spread":0.30051397705207633,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2093116780","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9860659,0.0015433808,0.011843128,0.00022310908,0.00019266753,0.00008345635,0.000004367978,0.0000035999742,0.000040368635],"genre_scores_gemma":[0.9914358,0.0005860416,0.006936312,0.0003838204,0.0005687138,7.8319346e-7,0.000020709995,0.000015199684,0.000052578067],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99851674,0.00010255777,0.000848749,0.00019900379,0.00019281454,0.00014014608],"domain_scores_gemma":[0.99878174,0.00009273008,0.0005057887,0.00012240463,0.00024133551,0.00025597628],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001794068,0.000121881734,0.00027419196,0.00006110994,0.00005798865,0.000029649347,0.00007730205,0.00013939758,0.000009864768],"category_scores_gemma":[0.0012028763,0.00009472854,0.00019072797,0.000093617135,0.000214463,0.000015764077,0.000049034974,0.00011995267,5.9902004e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005309179,0.0002077113,0.5382068,0.000108042994,0.0009411884,0.000044116594,0.000132114,0.00009313458,0.4064306,0.0009971609,0.0012382889,0.051069938],"study_design_scores_gemma":[0.001711153,0.0015187772,0.8036022,0.00009027667,0.00048656826,0.0001622202,0.00009319318,0.00029295508,0.17368674,0.0013716617,0.016647197,0.00033701485],"about_ca_topic_score_codex":0.000007150056,"about_ca_topic_score_gemma":0.000012301232,"teacher_disagreement_score":0.26539546,"about_ca_system_score_codex":0.000008400421,"about_ca_system_score_gemma":0.000093389724,"threshold_uncertainty_score":0.38629177},"labels":[],"label_agreement":null},{"id":"W2095330988","doi":"10.1172/jci11321","title":"Fetal parathyroids are not required to maintain placental calcium transport","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Bone health and treatments","field":"Medicine","cited_by":119,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institutes of Health; Memorial University of Newfoundland","keywords":"Internal medicine; Endocrinology; Fetus; Parathyroid hormone; Parathyroid hormone-related protein; Calcium metabolism; Calcium; Placenta; Biology; Medicine; Pregnancy","score_opus":0.16073439034211534,"score_gpt":0.43283778678662305,"score_spread":0.2721033964445077,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095330988","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9787838,0.000072063616,0.00070317666,0.019224556,0.0006017469,0.00028365123,0.0000072784846,0.000017908398,0.00030580474],"genre_scores_gemma":[0.986264,0.00007115666,0.004093116,0.008264441,0.00066079805,0.000004135161,0.000019593264,0.00001728696,0.0006054733],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9972721,0.00013471306,0.0016649865,0.00018084266,0.0004920991,0.0002552986],"domain_scores_gemma":[0.99752456,0.00017846095,0.000678784,0.00016025375,0.00022930294,0.0012286548],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012982369,0.00013890807,0.00061209395,0.000117961165,0.00006129539,0.000009766339,0.000072098606,0.00019246657,0.00005176928],"category_scores_gemma":[0.0007957699,0.000107252185,0.00027708814,0.00022135359,0.000107366635,0.00017316872,0.000008339413,0.0004694184,0.00008207215],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0034397636,0.00047230604,0.98592687,0.000025191464,0.00009279121,0.0008938016,0.00011780902,0.00002039937,0.00082837656,0.00010700939,0.003093791,0.0049818726],"study_design_scores_gemma":[0.0058386703,0.0022961558,0.9828795,0.00023663018,0.00019525646,0.0005975579,0.00010478347,0.00013815788,0.0014289963,0.0005472259,0.0056344145,0.00010263872],"about_ca_topic_score_codex":0.00003909678,"about_ca_topic_score_gemma":0.00003517573,"teacher_disagreement_score":0.010960115,"about_ca_system_score_codex":0.000113389324,"about_ca_system_score_gemma":0.00045843844,"threshold_uncertainty_score":0.43736172},"labels":[],"label_agreement":null},{"id":"W2095545431","doi":"10.1172/jci57414","title":"Dissecting the bulge in hair regeneration","year":2012,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Hair Growth and Disorders","field":"Medicine","cited_by":89,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institutes of Health; School of Medicine, New York University; Ellison Medical Foundation; York University; Dermatology Foundation","keywords":"Hair follicle; Stem cell; Regeneration (biology); Hair cycle; Biology; Cell biology; Adult stem cell; Melanocyte; Cellular differentiation; Genetics","score_opus":0.3043779786219467,"score_gpt":0.4871094002853221,"score_spread":0.18273142166337542,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095545431","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00308522,0.9932452,0.000076269615,0.0012307297,0.0013737429,0.0003751145,8.960535e-7,0.0000076260058,0.00060519483],"genre_scores_gemma":[0.0026995507,0.9923155,0.00044784215,0.00045134177,0.003804747,0.000007805976,0.000026327129,0.00002587441,0.0002210554],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9960704,0.0004923068,0.0027742018,0.00013083038,0.0003592433,0.00017302608],"domain_scores_gemma":[0.99616784,0.0010816798,0.0020194075,0.0002067925,0.00024091778,0.0002833446],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004485671,0.00017958651,0.0013922646,0.0001820661,0.000047732887,0.00002517241,0.00013487763,0.00040513725,0.000024748828],"category_scores_gemma":[0.006572483,0.00009713666,0.0006668215,0.00036321915,0.00012843066,0.0001832367,0.000020057432,0.0014150672,0.000024650872],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003071092,0.00010562268,0.0061722617,0.002545653,0.00009123381,0.000014722211,0.00012187861,0.0000041131234,9.386683e-7,0.00042013673,0.00087850925,0.98961425],"study_design_scores_gemma":[0.0008246385,0.00027909825,0.0032085686,0.011845055,0.0014313287,0.0002077686,0.00007827118,0.00005958398,0.0000036437382,0.0011062502,0.98080415,0.00015162876],"about_ca_topic_score_codex":0.000008572316,"about_ca_topic_score_gemma":0.000023295424,"teacher_disagreement_score":0.9894626,"about_ca_system_score_codex":0.00006669774,"about_ca_system_score_gemma":0.0007303565,"threshold_uncertainty_score":0.7868351},"labels":[],"label_agreement":null},{"id":"W2096018298","doi":"10.1172/jci17974","title":"Anti-IL-5 treatment reduces deposition of ECM proteins in the bronchial subepithelial basement membrane of mild atopic asthmatics","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Asthma and respiratory diseases","field":"Medicine","cited_by":842,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Christie (Canada)","funders":"Wellcome Trust; GlaxoSmithKline","keywords":"Periostin; Eosinophil; Basement membrane; Lumican; Eosinophil cationic protein; Medicine; Asthma; Immunology; Pathology; Extracellular matrix; Interleukin 5; Bronchoalveolar lavage; Interleukin; Decorin; Internal medicine; Biology; Lung; Cytokine; Proteoglycan; Cell biology","score_opus":0.06907356681266541,"score_gpt":0.36392874154126686,"score_spread":0.29485517472860145,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2096018298","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980025,0.00022995524,0.00012036685,0.00093479565,0.0001830241,0.00040411172,0.0000066019356,0.0000024160393,0.00011621166],"genre_scores_gemma":[0.9964948,0.00014632197,0.0027760954,0.00024688017,0.0003046663,0.0000052083437,0.000005504302,0.000006895775,0.000013581361],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9971773,0.00056681276,0.0016102546,0.00009279022,0.0004553596,0.000097456665],"domain_scores_gemma":[0.99817634,0.000276222,0.0010826961,0.00015008629,0.00018883577,0.00012581838],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012541666,0.00010229346,0.0005160109,0.000099166646,0.000028900618,0.00000682347,0.000075294985,0.000099860576,0.000022725884],"category_scores_gemma":[0.0008967794,0.000058591828,0.00025831375,0.00015572019,0.00021087249,0.00008934952,0.000005251572,0.00018170859,0.0000010523331],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015896378,0.008165525,0.79205585,0.00091794186,0.0004916993,0.0001554521,0.0029859194,0.00083233183,0.14642389,0.0018917053,0.00045799895,0.04403204],"study_design_scores_gemma":[0.0057967645,0.0056558186,0.57456535,0.0009486735,0.00041711942,0.00005622368,0.00065903884,0.0002540095,0.4099511,0.0008457668,0.00074830244,0.0001018462],"about_ca_topic_score_codex":0.000018459603,"about_ca_topic_score_gemma":0.000010483224,"teacher_disagreement_score":0.26352718,"about_ca_system_score_codex":0.000038017457,"about_ca_system_score_gemma":0.0005041744,"threshold_uncertainty_score":0.23893054},"labels":[],"label_agreement":null},{"id":"W2096171994","doi":"10.1172/jci58577","title":"Hematopoietic AMPK β1 reduces mouse adipose tissue macrophage inflammation and insulin resistance in obesity","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Metabolism, Diabetes, and Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":332,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"National Health and Medical Research Council; Medical Research Council; Canadian Institutes of Health Research; McMaster University; Canadian Diabetes Association","keywords":"Insulin resistance; Adipose tissue; Endocrinology; Internal medicine; AMPK; Inflammation; Bone marrow; Adipose tissue macrophages; Macrophage; Biology; Insulin; Chemistry; Medicine; Biochemistry; Protein kinase A; Phosphorylation; In vitro","score_opus":0.04141721394672844,"score_gpt":0.3166748931433048,"score_spread":0.2752576791965764,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2096171994","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9578337,0.041515656,0.00008308887,0.000076897035,0.000222603,0.0000929571,0.0000028035713,0.000003109591,0.0001692002],"genre_scores_gemma":[0.9760129,0.018976446,0.004162392,0.00020188371,0.00051043165,0.0000035334258,0.000007841283,0.0000109889315,0.000113569884],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99833983,0.0002518289,0.00095858227,0.0001738736,0.00015483474,0.00012104341],"domain_scores_gemma":[0.99884576,0.00003929355,0.0006427724,0.00014061366,0.00016788197,0.0001636773],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001331042,0.00010159945,0.0002776109,0.0000568068,0.000030842948,0.00001936009,0.0001261354,0.00019730486,0.000019285853],"category_scores_gemma":[0.0010045118,0.0000905168,0.000063763015,0.00008853699,0.00017697256,0.000028621134,0.00003271663,0.00021626739,0.000003704295],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013634441,0.00046432824,0.06407066,0.0003138929,0.00018879057,0.00004985092,0.0031465217,0.000035158122,0.71950316,0.0015553081,0.0031245353,0.20618436],"study_design_scores_gemma":[0.0012940712,0.00029637394,0.07698146,0.00011498033,0.000044453038,0.000007690067,0.00007486842,0.000015224365,0.90153855,0.0077010943,0.011767808,0.00016342454],"about_ca_topic_score_codex":0.0000088411025,"about_ca_topic_score_gemma":0.0000836725,"teacher_disagreement_score":0.20602094,"about_ca_system_score_codex":0.000010016437,"about_ca_system_score_gemma":0.00012363566,"threshold_uncertainty_score":0.3691168},"labels":[],"label_agreement":null},{"id":"W2096190607","doi":"10.1172/jci41062","title":"N-acetylcysteine reduces the size and activity of von Willebrand factor in human plasma and mice","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Complement system in diseases","field":"Immunology and Microbiology","cited_by":245,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Blood Services; University of Toronto","funders":"National Heart, Lung, and Blood Institute; National Institutes of Health; Heart and Stroke Foundation of Canada; American Heart Association","keywords":"ADAMTS13; Von Willebrand factor; Chemistry; Acetylcysteine; Platelet; Thrombotic thrombocytopenic purpura; Mucin; Pharmacology; Molecular biology; Biochemistry; Immunology; Medicine","score_opus":0.1126297699523004,"score_gpt":0.35687517591966617,"score_spread":0.24424540596736577,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2096190607","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987124,0.0004706374,0.0000033470897,0.000363321,0.00024305616,0.00012770884,0.000007657235,0.0000031151571,0.000068740475],"genre_scores_gemma":[0.99971247,0.00006360009,0.00008401276,0.0000422434,0.00004285762,0.0000014717854,0.0000010521837,0.0000041061107,0.000048206643],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983712,0.0005694029,0.0008331908,0.00010021232,0.00004394413,0.00008204163],"domain_scores_gemma":[0.99778295,0.0011421815,0.00087787415,0.00008694732,0.00007512481,0.00003491139],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009926436,0.00007685008,0.0003421014,0.000047644688,0.00005149851,0.000006711842,0.00010422705,0.000104007384,0.00007405391],"category_scores_gemma":[0.0012129508,0.000049786715,0.00005915646,0.00005302345,0.00046257224,0.00015168232,0.000044086464,0.00023714914,0.0000010489603],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042165953,0.00012699337,0.42376584,0.000044952954,0.0001140182,0.0000017877175,0.0010645442,7.490777e-7,0.5716257,0.00014159907,0.00025642858,0.002435703],"study_design_scores_gemma":[0.001900467,0.00049228914,0.85549074,0.00015468117,0.00004799891,0.000027249207,0.00020202243,0.0000052534433,0.14061433,0.0008770003,0.00013473518,0.00005325212],"about_ca_topic_score_codex":0.00005414199,"about_ca_topic_score_gemma":0.00004267526,"teacher_disagreement_score":0.4317249,"about_ca_system_score_codex":0.000007200627,"about_ca_system_score_gemma":0.000048427675,"threshold_uncertainty_score":0.20302433},"labels":[],"label_agreement":null},{"id":"W2096574031","doi":"10.1172/jci31986","title":"Osteopontin mediates obesity-induced adipose tissue macrophage infiltration and insulin resistance in mice","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Bone and Dental Protein Studies","field":"Medicine","cited_by":391,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Obesity Network","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; American Diabetes Association; University of Kentucky; American Heart Association; National Institutes of Health","keywords":"Osteopontin; Adipose tissue; Adipose tissue macrophages; Inflammation; Insulin resistance; Internal medicine; Endocrinology; Proinflammatory cytokine; Stromal vascular fraction; Monocyte; Biology; White adipose tissue; Insulin; Medicine","score_opus":0.05055817701367395,"score_gpt":0.3662460256308562,"score_spread":0.31568784861718224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2096574031","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9936791,0.0030019416,0.00009255479,0.0020545067,0.0002706059,0.00021960499,7.8805857e-7,0.000008811679,0.00067209284],"genre_scores_gemma":[0.99157107,0.00046875863,0.006426368,0.0008381736,0.0005359021,0.0000012428947,0.0000031760708,0.00000898009,0.00014630785],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99774814,0.00013879736,0.0015183896,0.00013938003,0.00031648515,0.00013882188],"domain_scores_gemma":[0.9981726,0.0005969675,0.00069028046,0.00008268729,0.00023159942,0.00022588827],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0034204319,0.000102419086,0.00045604937,0.00014691928,0.000043766013,0.000018698891,0.000048883125,0.00017944368,0.0000076073143],"category_scores_gemma":[0.0034854035,0.000084339255,0.00006226125,0.00023874307,0.00015102712,0.00025704975,0.00002383779,0.0005368216,0.000008414096],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00284935,0.0005145092,0.73976535,0.0003135604,0.00012302952,0.0007807454,0.0021583484,0.000001805195,0.19921519,0.0005554179,0.0013586407,0.05236408],"study_design_scores_gemma":[0.0025718706,0.0006729564,0.9240306,0.0004026723,0.00006809269,0.000056601104,0.00021462304,0.000012496229,0.06792052,0.0033839578,0.00058030005,0.00008531486],"about_ca_topic_score_codex":0.00003511462,"about_ca_topic_score_gemma":0.00057352334,"teacher_disagreement_score":0.18426527,"about_ca_system_score_codex":0.000035738252,"about_ca_system_score_gemma":0.000102232385,"threshold_uncertainty_score":0.41726053},"labels":[],"label_agreement":null},{"id":"W2096797731","doi":"10.1172/jci82267","title":"Rabbit antithymocyte globulin–induced serum sickness disease and human kidney graft survival","year":2015,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Xenotransplantation and immune response","field":"Medicine","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba","funders":"Université de Nantes; Ministère de l'Enseignement Supérieur et de la Recherche; Conseil Régional des Pays de la Loire; Agence Nationale de la Recherche","keywords":"Serum sickness; Globulin; Immunology; Medicine; Kidney; Disease; Antibody; Internal medicine","score_opus":0.1567428427380242,"score_gpt":0.4196775259272789,"score_spread":0.2629346831892547,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2096797731","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9889208,0.00014134277,0.00016627966,0.009572699,0.0007619851,0.00015018802,0.000007844417,0.000020227311,0.00025864696],"genre_scores_gemma":[0.995766,0.00011375538,0.00061728794,0.0024642092,0.00064856355,9.787656e-7,0.000023650458,0.000016859365,0.0003487262],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974638,0.0004660813,0.0012552299,0.00015414436,0.0005161945,0.00014454593],"domain_scores_gemma":[0.9967742,0.00025407595,0.0005971918,0.00016877854,0.00050631235,0.0016994225],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026520987,0.00013169365,0.0005136311,0.00011885553,0.00006247728,0.00004084226,0.000087310305,0.0001270921,0.000033852783],"category_scores_gemma":[0.0039678053,0.00010307065,0.00016830541,0.00016196446,0.0002012089,0.00029839552,0.00001837148,0.00044829265,0.000018233155],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0076041673,0.00052451267,0.95118976,0.00025746445,0.00035058692,0.00056321436,0.00061354483,0.000017438979,0.028267087,0.0015091886,0.005746642,0.003356389],"study_design_scores_gemma":[0.008117776,0.0011930838,0.98076445,0.00047665572,0.00046393962,0.0001569572,0.00011093354,0.00025374052,0.003005899,0.0018395564,0.0034668753,0.00015011446],"about_ca_topic_score_codex":0.000015666206,"about_ca_topic_score_gemma":0.0000032381997,"teacher_disagreement_score":0.029574705,"about_ca_system_score_codex":0.000029785231,"about_ca_system_score_gemma":0.0010131545,"threshold_uncertainty_score":0.475012},"labels":[],"label_agreement":null},{"id":"W2097061706","doi":"10.1172/jci15748","title":"Increased ABCA1 activity protects against atherosclerosis","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cholesterol and Lipid Metabolism","field":"Medicine","cited_by":250,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia; BC Children's Hospital; Xenon Pharmaceuticals (Canada); Children's & Women's Health Centre of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"ABCA1; Efflux; Cholesterol; Reverse cholesterol transport; Apolipoprotein E; Genetically modified mouse; Phospholipid; Transgene; Endocrinology; Chemistry; In vivo; Transporter; Internal medicine; Biology; Lipoprotein; Biochemistry; Medicine; Gene; Genetics","score_opus":0.14440987041581818,"score_gpt":0.35980648760842343,"score_spread":0.21539661719260525,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2097061706","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99426025,0.00010911121,0.0001515945,0.0039999224,0.0005692419,0.00021851962,0.0000015028254,0.000021824633,0.00066800794],"genre_scores_gemma":[0.9918452,0.0002926098,0.0023063004,0.003139143,0.002130045,0.0000035471376,0.0000013213757,0.000017024384,0.0002648115],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99791366,0.0002841503,0.0010529759,0.00014871512,0.00045110765,0.00014938028],"domain_scores_gemma":[0.99780625,0.00026738876,0.00094783684,0.00020615877,0.0002797978,0.0004925731],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015777427,0.00012397749,0.0005878485,0.00010169895,0.000049205606,0.0000273363,0.00009246725,0.00019295864,0.00008776488],"category_scores_gemma":[0.0030520798,0.00009128647,0.00033035988,0.0001952744,0.00016566293,0.00028214243,0.000018934352,0.00072994345,0.000047696496],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008676322,0.0020587104,0.2684181,0.00020566591,0.0003572977,0.00005560855,0.0007019369,0.000032079355,0.3470549,0.000100814475,0.012207147,0.3679401],"study_design_scores_gemma":[0.0043994677,0.0006648696,0.96732897,0.00037835524,0.00013586247,0.00004680568,0.000013829622,0.0015776491,0.014373756,0.00026515135,0.010704785,0.00011051422],"about_ca_topic_score_codex":0.00000862315,"about_ca_topic_score_gemma":0.0000016303854,"teacher_disagreement_score":0.69891083,"about_ca_system_score_codex":0.00003078116,"about_ca_system_score_gemma":0.00009744422,"threshold_uncertainty_score":0.37225544},"labels":[],"label_agreement":null},{"id":"W2097135837","doi":"10.1172/jci26032","title":"Endocytosis of HIV-1 activates plasmacytoid dendritic cells via Toll-like receptor- viral RNA interactions","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":661,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Center for AIDS Research, University of Washington; York University; Wellcome Trust; Fondation pour la Recherche Médicale; Institut National de la Santé et de la Recherche Médicale; National Cancer Institute; School of Medicine, New York University; National Institutes of Health; Yale University; Cancer Research Institute","keywords":"TLR7; TLR3; RNA; Biology; Endosome; Viral envelope; Endocytosis; Plasmacytoid dendritic cell; Cell biology; Interferon; Toll-like receptor; Virology; Virus; Innate immune system; Immune system; Receptor; Dendritic cell; Immunology; Gene; Genetics; Intracellular","score_opus":0.05002535495958479,"score_gpt":0.3543757530537523,"score_spread":0.30435039809416753,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2097135837","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99549013,0.00031058874,0.0002957546,0.0023066744,0.0011006481,0.00012121322,0.00004184952,0.000011836466,0.00032131348],"genre_scores_gemma":[0.99579203,0.0002587316,0.0024535125,0.0001879565,0.00027709233,0.000004845248,0.000047655274,0.000011298193,0.00096690166],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975853,0.0005362841,0.0013833505,0.00015275902,0.00010998587,0.00023235235],"domain_scores_gemma":[0.99730754,0.0013175581,0.0008289124,0.00015677261,0.00026232825,0.0001269173],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00066919276,0.00013342107,0.00047462282,0.00014099559,0.00009354979,0.00001532425,0.00019538973,0.00017169284,0.0008054069],"category_scores_gemma":[0.0006533167,0.00010496507,0.0003064718,0.00010845733,0.000370698,0.000386643,0.00004046645,0.0007284675,0.00095234707],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00060156744,0.0006096341,0.014790596,0.000016275375,0.0005405157,0.000008987656,0.00019357771,0.000069133595,0.9379542,0.00008127226,0.022919549,0.022214713],"study_design_scores_gemma":[0.00289044,0.0009429735,0.007624947,0.00012164005,0.00011043594,0.000105443745,0.00009679005,0.00003720759,0.9486523,0.00030867432,0.03900008,0.000109046734],"about_ca_topic_score_codex":0.000017280592,"about_ca_topic_score_gemma":0.000020245714,"teacher_disagreement_score":0.022105666,"about_ca_system_score_codex":0.000091218164,"about_ca_system_score_gemma":0.00022560892,"threshold_uncertainty_score":0.99982554},"labels":[],"label_agreement":null},{"id":"W2097141045","doi":"10.1172/jci71090","title":"Heparan sulfate deficiency disrupts developmental angiogenesis and causes congenital diaphragmatic hernia","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Congenital Diaphragmatic Hernia Studies","field":"Medicine","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Center for Research Resources; National Institute of General Medical Sciences; National Heart, Lung, and Blood Institute; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Heparan sulfate; Biology; Congenital diaphragmatic hernia; Perlecan; Cell biology; Angiogenesis; Knockout mouse; Cancer research; Immunology; Internal medicine; Receptor; Genetics; Biochemistry; Medicine; Heparin","score_opus":0.06549491272047092,"score_gpt":0.3483720094520007,"score_spread":0.2828770967315298,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2097141045","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953412,0.0013601839,0.00005502891,0.0019720392,0.0002794605,0.00038111824,0.0000050251233,0.000022396618,0.00058355706],"genre_scores_gemma":[0.99296397,0.00033303042,0.0056195008,0.00064447836,0.00022722251,0.000013198845,0.00000483482,0.00002186666,0.0001718987],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9970731,0.00017802583,0.0018200221,0.00019434447,0.0004999846,0.00023451775],"domain_scores_gemma":[0.99737805,0.0008205347,0.0006813961,0.00012545352,0.00048217227,0.00051238976],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009902214,0.00020001561,0.0007274273,0.00015778166,0.00009852618,0.00006510591,0.00009715933,0.00012993556,0.00014228256],"category_scores_gemma":[0.0037186146,0.0001482684,0.00022766105,0.0002202956,0.0004297498,0.0004019472,0.00006400901,0.0002676485,0.00012867089],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008769914,0.00019481046,0.9617397,0.00014946228,0.00039262848,0.00006838544,0.00089351274,0.000001855121,0.006004219,0.000080201105,0.0013138043,0.029073708],"study_design_scores_gemma":[0.0016623086,0.00043672512,0.9936385,0.00018338948,0.0003607691,0.00043195067,0.00057185086,0.00024238443,0.00077021884,0.0012455612,0.00029065082,0.00016565748],"about_ca_topic_score_codex":0.000056318935,"about_ca_topic_score_gemma":0.00004958549,"teacher_disagreement_score":0.03189882,"about_ca_system_score_codex":0.000054631862,"about_ca_system_score_gemma":0.0002902816,"threshold_uncertainty_score":0.604621},"labels":[],"label_agreement":null},{"id":"W2097216924","doi":"10.1172/jci31350","title":"KBMA Listeria monocytogenes is an effective vector for DC-mediated induction of antitumor immunity","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immunotherapy and Immune Responses","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"York University; National Cancer Institute; National Institutes of Health; Cancer Research Institute; National Institute of Allergy and Infectious Diseases; Bill and Melinda Gates Foundation","keywords":"Antigen; MHC class I; Antigen presentation; Biology; Cytotoxic T cell; Major histocompatibility complex; CD8; Immunology; Epitope; Cancer immunotherapy; Listeria monocytogenes; T cell; Immune system; Immunotherapy; In vitro","score_opus":0.1338904788240948,"score_gpt":0.3803547236159111,"score_spread":0.2464642447918163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2097216924","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99577785,0.0014575536,0.0003359405,0.00025230364,0.0018110009,0.00031261632,0.000027888584,0.000013949657,0.0000109198345],"genre_scores_gemma":[0.9980558,0.0006047223,0.00063980743,0.00027046347,0.00018390521,0.0000094565585,0.00005495665,0.000016363672,0.00016452765],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99723834,0.000935263,0.0014589019,0.00014305643,0.00006365255,0.00016076454],"domain_scores_gemma":[0.996281,0.0013198591,0.0015458567,0.00022195948,0.0005893779,0.000041936368],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018312519,0.00014576397,0.00063219154,0.00016129191,0.0001837473,0.000008098169,0.00021487499,0.00035808788,0.00007949249],"category_scores_gemma":[0.002415907,0.00011840419,0.00031171713,0.00015967735,0.00064177864,0.00041942962,0.000022222235,0.00042687487,0.000015860684],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0050618397,0.00032730776,0.013246708,0.000028400445,0.0003609273,0.0000022112426,0.001137445,0.0000050406657,0.9726327,0.000061578736,0.00072901667,0.0064068404],"study_design_scores_gemma":[0.0030496875,0.0033857743,0.3662807,0.00008185648,0.00006884196,0.00015473456,0.00012901559,0.000012877012,0.6233186,0.00040050186,0.0030092741,0.000108126],"about_ca_topic_score_codex":0.00004905373,"about_ca_topic_score_gemma":0.0000019405168,"teacher_disagreement_score":0.353034,"about_ca_system_score_codex":0.000028134262,"about_ca_system_score_gemma":0.00025442906,"threshold_uncertainty_score":0.48283827},"labels":[],"label_agreement":null},{"id":"W2097448914","doi":"10.1172/jci25509","title":"Cannabinoids promote embryonic and adult hippocampus neurogenesis and produce anxiolytic- and antidepressant-like effects","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cannabis and Cannabinoid Research","field":"Medicine","cited_by":527,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research; Saskatchewan Health Research Foundation; Heart and Stroke Foundation of Canada","keywords":"Neurogenesis; Dentate gyrus; Hippocampal formation; Neuroscience; Cannabinoid receptor; Anxiolytic; Neural stem cell; Hippocampus; Cannabinoid; Pharmacology; Biology; Medicine; Stem cell; Internal medicine; Receptor; Cell biology; Agonist","score_opus":0.02596151156862688,"score_gpt":0.3436696183526028,"score_spread":0.31770810678397593,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2097448914","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9468214,0.0032448934,0.0000140943175,0.04925258,0.00019155626,0.00042782447,0.0000018264647,0.000014056382,0.00003179792],"genre_scores_gemma":[0.99177444,0.0030029626,0.0012077888,0.0022687258,0.00092167855,0.000008068687,0.0000024531873,0.000027272936,0.00078660954],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977404,0.00026364758,0.00092084054,0.00034548523,0.00047049034,0.00025912895],"domain_scores_gemma":[0.997891,0.00011615281,0.0004614426,0.00020435757,0.00055940484,0.0007676484],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016973199,0.00017995642,0.0006089873,0.0001610719,0.00009823841,0.00007924131,0.000073786076,0.00018316031,0.00000541532],"category_scores_gemma":[0.0033379374,0.00013591573,0.000104835744,0.00017877987,0.0005344413,0.0002841833,0.0000755124,0.0006366429,0.0000016731162],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00090248714,0.00028098142,0.51730096,0.0010675732,0.0001897744,0.00017245719,0.0003692497,0.000008537178,0.035498295,0.00014028134,0.02669708,0.41737232],"study_design_scores_gemma":[0.003994881,0.0025111712,0.96759164,0.00042299507,0.00030482034,0.0013536854,0.00003744734,0.0019040691,0.011573079,0.0008887992,0.009234105,0.00018329336],"about_ca_topic_score_codex":0.00002069525,"about_ca_topic_score_gemma":0.000015948657,"teacher_disagreement_score":0.4502907,"about_ca_system_score_codex":0.000028276807,"about_ca_system_score_gemma":0.00037989786,"threshold_uncertainty_score":0.5542483},"labels":[],"label_agreement":null},{"id":"W2097573911","doi":"10.1172/jci32959","title":"Recovery from diabetes in mice by β cell regeneration","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":597,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Hebrew University of Jerusalem","keywords":"Beta cell; Neogenesis; Regeneration (biology); Islet; Doxycycline; Biology; Glucose homeostasis; Immunology; Transplantation; Diabetes mellitus; Stem cell; Endocrinology; Cell biology; Internal medicine; Cancer research; Insulin resistance; Pharmacology; Medicine; Antibiotics; Biochemistry","score_opus":0.05160187478631977,"score_gpt":0.3345719929995159,"score_spread":0.2829701182131961,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2097573911","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99496156,0.00058262766,0.0005375541,0.0019057188,0.0007250906,0.000077280514,0.0000029777964,0.000008293401,0.0011989154],"genre_scores_gemma":[0.98891836,0.0001585261,0.006067892,0.0034177986,0.00092089514,6.9866223e-7,0.000040992712,0.000009240446,0.00046559967],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979511,0.00012763258,0.001416104,0.000115846124,0.00026503106,0.00012427615],"domain_scores_gemma":[0.9975912,0.0012268086,0.000678293,0.00008377199,0.00017686107,0.00024304069],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025464303,0.0000789124,0.0003781076,0.00011889739,0.000017959894,0.000015355196,0.000045288743,0.00017123297,0.00006646774],"category_scores_gemma":[0.0030535636,0.000064456835,0.00012874076,0.000167637,0.00006576994,0.00021242398,0.0000067059104,0.00035296756,0.000020955367],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002596291,0.00018944053,0.6195066,0.000017124717,0.000034323934,0.000008752773,0.00004407847,0.000022469341,0.34725022,0.000013073027,0.025347153,0.0073071457],"study_design_scores_gemma":[0.0038967822,0.0009600445,0.40440646,0.00028037833,0.00014073573,0.0000031456098,0.00008518924,0.0012032372,0.5810793,0.003931491,0.0038972506,0.00011599642],"about_ca_topic_score_codex":0.000023528753,"about_ca_topic_score_gemma":0.000008235994,"teacher_disagreement_score":0.23382908,"about_ca_system_score_codex":0.000052157342,"about_ca_system_score_gemma":0.00014344275,"threshold_uncertainty_score":0.36556217},"labels":[],"label_agreement":null},{"id":"W2097830796","doi":"10.1172/jci77820","title":"Maternal anti-platelet β3 integrins impair angiogenesis and cause intracranial hemorrhage","year":2015,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Platelet Disorders and Treatments","field":"Medicine","cited_by":115,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Canadian Blood Services; St. Michael's Hospital","funders":"Canadian Institutes of Health Research; University of Toronto; Canadian Blood Services; Heart and Stroke Foundation of Canada","keywords":"Neonatal alloimmune thrombocytopenia; Angiogenesis; Medicine; Integrin; Immunology; Fetus; Antibody; Hemostasis; Antigen; Platelet; Biology; Internal medicine; Pregnancy; Receptor","score_opus":0.08439889918890468,"score_gpt":0.36833575572728117,"score_spread":0.28393685653837647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2097830796","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966204,0.00029253797,0.0001373887,0.0021608612,0.00052620337,0.00012284433,0.0000065754643,0.000016030277,0.00011713717],"genre_scores_gemma":[0.99210936,0.00020706686,0.006262876,0.0007498721,0.0005641262,0.0000010226493,0.000009818958,0.000016273814,0.00007959615],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99819684,0.00011000605,0.0010514456,0.0001452654,0.0003385223,0.00015790875],"domain_scores_gemma":[0.9982588,0.00013070041,0.00056274474,0.000116252304,0.00028535788,0.0006461043],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010199342,0.00014030926,0.0006168538,0.00011618453,0.00003291555,0.000037592203,0.00006667102,0.00017209383,0.000024448915],"category_scores_gemma":[0.0009079282,0.000098909695,0.00016933284,0.00011870336,0.0001508869,0.00026083004,0.000025903786,0.00031906678,0.000021977727],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007174196,0.00033073648,0.9553641,0.00004420244,0.00034206733,0.0063142846,0.00016039614,0.000012282767,0.0009666345,0.000031711716,0.0015331459,0.03418301],"study_design_scores_gemma":[0.010206788,0.0023958143,0.9659621,0.00020983574,0.0005696544,0.011127714,0.00014810389,0.002086027,0.0036798622,0.002756829,0.0006781641,0.00017909758],"about_ca_topic_score_codex":0.000054860182,"about_ca_topic_score_gemma":0.0000121002395,"teacher_disagreement_score":0.034003913,"about_ca_system_score_codex":0.000040621988,"about_ca_system_score_gemma":0.000266288,"threshold_uncertainty_score":0.40334204},"labels":[],"label_agreement":null},{"id":"W2098161615","doi":"10.1172/jci41036","title":"Health care reform — need for less emotion and more science","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Primary Care and Health Outcomes","field":"Health Professions","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Health care; Government (linguistics); Quality (philosophy); Public relations; Value (mathematics); Health care reform; Medicine; Business; Health policy; Political science; Economic growth; Economics","score_opus":0.2256484099517937,"score_gpt":0.5621515260264938,"score_spread":0.33650311607470007,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2098161615","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7737067,0.0004944833,0.0007050925,0.22251031,0.0013646862,0.00048217643,0.0000063681578,0.000019385767,0.00071084476],"genre_scores_gemma":[0.89121646,0.00040013707,0.012377992,0.09442386,0.0014463144,0.0000045138736,0.000011685559,0.000009260196,0.000109785775],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99695176,0.0002542515,0.0019359082,0.00016275253,0.0003709971,0.00032435713],"domain_scores_gemma":[0.9960043,0.00054997444,0.0016611002,0.00014736765,0.001120879,0.0005163958],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005609936,0.000091332826,0.00051435543,0.00017466184,0.0007388968,0.000016020158,0.00016439428,0.00016523871,0.000004291397],"category_scores_gemma":[0.0020909011,0.000067357025,0.000102535116,0.00023523804,0.00024019621,0.0005248897,0.000027355009,0.0006720037,0.0000024750846],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008071324,0.00012305533,0.23047243,0.0012939549,0.00002954777,0.0000045618226,0.020629313,0.00001098648,0.00040037144,0.025625983,0.07277788,0.64782476],"study_design_scores_gemma":[0.0023382297,0.001663883,0.9631575,0.00036390702,0.00002652747,0.000007673651,0.007557363,0.00014206035,0.00004393719,0.011143733,0.013447813,0.00010736894],"about_ca_topic_score_codex":0.000066038476,"about_ca_topic_score_gemma":0.00003728658,"teacher_disagreement_score":0.7326851,"about_ca_system_score_codex":0.00078867,"about_ca_system_score_gemma":0.00591967,"threshold_uncertainty_score":0.99971586},"labels":[],"label_agreement":null},{"id":"W2098195823","doi":"10.1172/jci19159","title":"Autosomal dominant pseudohypoparathyroidism type Ib is associated with a heterozygous microdeletion that likely disrupts a putative imprinting control element of GNAS","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Genetic Syndromes and Imprinting","field":"Biochemistry, Genetics and Molecular Biology","cited_by":259,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital; McGill University","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Canadian Institutes of Health Research; U.S. Public Health Service; National Institutes of Health","keywords":"GNAS complex locus; Pseudohypoparathyroidism; Exon; Genetics; Genomic imprinting; Biology; Locus (genetics); X chromosome; Imprinting (psychology); X-inactivation; Differentially methylated regions; DNA methylation; Molecular biology; Gene; Parathyroid hormone; Internal medicine; Medicine","score_opus":0.038505553832486036,"score_gpt":0.3210772784450016,"score_spread":0.28257172461251556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2098195823","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929771,0.0003386095,0.006022773,0.00020492545,0.00022496496,0.00017637249,0.000005386968,0.0000026137964,0.00004726728],"genre_scores_gemma":[0.994885,0.00010353347,0.0044986773,0.00031870644,0.00010178805,0.0000028304066,0.000010091719,0.000017917966,0.000061439976],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977956,0.0003645683,0.001129331,0.0002236312,0.00027872974,0.0002081571],"domain_scores_gemma":[0.9972793,0.00011515055,0.0017842965,0.00015256034,0.0005243608,0.00014437501],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015526358,0.00016134938,0.00044804256,0.00004980002,0.000055747663,0.000026366593,0.00012049535,0.00017865226,0.000007944328],"category_scores_gemma":[0.0013727135,0.0001211571,0.00020447557,0.000110344154,0.00014717059,0.000014148645,0.00002783274,0.00022228115,0.000001892868],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019762747,0.00023390862,0.15691753,0.000022034763,0.00039138668,0.000010377396,0.00029921872,0.00033108713,0.8397293,0.00006293334,0.00028138954,0.0015232305],"study_design_scores_gemma":[0.0067719463,0.005451256,0.29405922,0.00026374348,0.0002917451,0.00027482235,0.0002724117,0.0011077859,0.68958044,0.0009025217,0.00068965583,0.00033447324],"about_ca_topic_score_codex":0.000006116515,"about_ca_topic_score_gemma":0.0000042573106,"teacher_disagreement_score":0.15014887,"about_ca_system_score_codex":0.00001999118,"about_ca_system_score_gemma":0.0002487411,"threshold_uncertainty_score":0.4940643},"labels":[],"label_agreement":null},{"id":"W2098613222","doi":"10.1172/jci43343","title":"Human C3 mutation reveals a mechanism of dense deposit disease pathogenesis and provides insights into complement activation and regulation","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Complement system in diseases","field":"Immunology and Microbiology","cited_by":222,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Medical Research Council; Ministerio de Educación y Cultura; Cardiff University; University of Oxford","keywords":"C3-convertase; Complement system; Alternative complement pathway; Proteases; Factor H; Mesangium; Pathogenesis; Complement factor I; Proteolysis; Mutant; Chemistry; Cell biology; Biology; Biochemistry; Immunology; Glomerulonephritis; Gene; Endocrinology; Enzyme; Kidney; Immune system","score_opus":0.056564546830934606,"score_gpt":0.3484637271839726,"score_spread":0.291899180353038,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2098613222","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99707335,0.0003220436,0.0015996896,0.00037330185,0.00026423132,0.00034751507,0.000004528584,0.000009773073,0.000005549728],"genre_scores_gemma":[0.9981641,0.00002419312,0.001544358,0.000094572715,0.000092777285,0.0000090473695,0.00004195892,0.000008642467,0.000020343621],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99772143,0.00050720817,0.0014091212,0.00017019069,0.00010725546,0.000084797946],"domain_scores_gemma":[0.9974333,0.00040697376,0.0015708159,0.00014208205,0.00034860853,0.00009820454],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010451492,0.00011005795,0.00033573704,0.0001520323,0.00014811059,0.000022275133,0.00007687783,0.000120506644,0.00003138553],"category_scores_gemma":[0.001158379,0.000093479124,0.0000790611,0.00007374593,0.00027007243,0.00029343407,0.0000449398,0.00018132008,0.0000013983423],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016201365,0.00010064018,0.09516051,0.00013576365,0.00008120051,0.0000021552403,0.00034959288,0.0000065157124,0.89124423,0.0086745275,0.00013181513,0.003951021],"study_design_scores_gemma":[0.0014014744,0.00037242024,0.859743,0.00029914803,0.00018644518,0.000017115142,0.00010041497,0.00013583375,0.07186366,0.0657063,0.000076412914,0.00009780574],"about_ca_topic_score_codex":0.000036530757,"about_ca_topic_score_gemma":0.000051837455,"teacher_disagreement_score":0.8193806,"about_ca_system_score_codex":0.000015787442,"about_ca_system_score_gemma":0.00008709872,"threshold_uncertainty_score":0.3811968},"labels":[],"label_agreement":null},{"id":"W2098735224","doi":"10.1172/jci71544","title":"Immune cell trafficking from the brain maintains CNS immune tolerance","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Neuroinflammation and Neurodegeneration Mechanisms","field":"Neuroscience","cited_by":128,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre for Global Health Research","funders":"National Institute of Neurological Disorders and Stroke","keywords":"Immune system; Fingolimod; Neuroinflammation; Experimental autoimmune encephalomyelitis; Immunology; Multiple sclerosis; Biology; Microglia; Medicine; Inflammation","score_opus":0.07793008327191302,"score_gpt":0.32876903808784136,"score_spread":0.25083895481592833,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2098735224","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9676825,0.000034431385,0.010647928,0.019210914,0.0018907415,0.0001509083,0.0000036694933,0.000039202438,0.00033971958],"genre_scores_gemma":[0.9824002,0.00007477165,0.0013370195,0.014668135,0.0012447012,0.0000022169413,0.0000027987057,0.00002203677,0.00024815102],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99530953,0.0017234326,0.0019581618,0.0002664653,0.0005584789,0.00018395807],"domain_scores_gemma":[0.9932163,0.0044037844,0.0017095312,0.000350695,0.00014007109,0.00017966914],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0029154604,0.000153828,0.00036996053,0.00006081236,0.00025015962,0.00015093408,0.0005167948,0.00010628647,0.00007778069],"category_scores_gemma":[0.009063143,0.00010830678,0.0002854073,0.00024363585,0.0002007687,0.00040793518,0.00004689995,0.0007224187,0.00007255219],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055965473,0.000056143468,0.00029356795,0.0000040300056,0.0000031764912,0.000007855445,0.00024444645,0.0020967908,0.984901,0.007041764,0.0012032224,0.004092024],"study_design_scores_gemma":[0.0013784233,0.000309872,0.012562491,0.000059019516,0.000022977558,0.000024881698,0.000039049373,0.021880167,0.9454455,0.008926271,0.009205389,0.00014597859],"about_ca_topic_score_codex":0.0000043091513,"about_ca_topic_score_gemma":0.000004133777,"teacher_disagreement_score":0.039455533,"about_ca_system_score_codex":0.000016000831,"about_ca_system_score_gemma":0.00012096793,"threshold_uncertainty_score":0.9992839},"labels":[],"label_agreement":null},{"id":"W2099259456","doi":"10.1172/jci81859","title":"IDO1 suppresses inhibitor development in hemophilia A treated with factor VIII","year":2015,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Hemophilia Treatment and Research","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Associazione Italiana per la Ricerca sul Cancro; Novo Nordisk; CSL Behring; Ministero della Salute; Pfizer; McMaster University; Biogen","keywords":"TLR9; Immune tolerance; Immunology; Medicine; Antibody; Clotting factor; Internal medicine; Immune system; Pharmacology; Biology; Gene expression; Gene; Biochemistry","score_opus":0.18521686125478415,"score_gpt":0.4139520817657737,"score_spread":0.22873522051098955,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2099259456","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956065,0.00010941088,0.000015429088,0.0035447835,0.00012926762,0.0002317833,0.0000011087393,0.000011751909,0.0003500083],"genre_scores_gemma":[0.9941734,0.00003730808,0.004474811,0.00021189355,0.00044502548,0.000004528405,0.00001151045,0.000014649599,0.0006268606],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99762166,0.00017227774,0.001179862,0.00014901011,0.0006909375,0.00018627242],"domain_scores_gemma":[0.9980005,0.00026978686,0.00036567115,0.00012201221,0.00058532343,0.0006567213],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011368598,0.00012875356,0.0005239447,0.00021981593,0.00002524425,0.000022966384,0.00007943892,0.00015706806,0.00003815066],"category_scores_gemma":[0.0017676388,0.00007509637,0.0000853584,0.00030325452,0.00017119243,0.00021608888,0.000020845482,0.00047572464,0.00003700085],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014354014,0.00046653333,0.98769706,0.000042403793,0.000108390996,0.00036885147,0.00043230635,0.000010523643,0.0013926283,0.000012691639,0.0018627074,0.0061705047],"study_design_scores_gemma":[0.014589005,0.0034074609,0.89590204,0.0010112448,0.000101574595,0.000212531,0.00020251669,0.00017790818,0.07636292,0.0004160441,0.0074244724,0.00019228451],"about_ca_topic_score_codex":0.000011112599,"about_ca_topic_score_gemma":0.000017928745,"teacher_disagreement_score":0.09179503,"about_ca_system_score_codex":0.00014031242,"about_ca_system_score_gemma":0.001506131,"threshold_uncertainty_score":0.30623412},"labels":[],"label_agreement":null},{"id":"W2101121629","doi":"10.1172/jci34538","title":"Decreased FGF8 signaling causes deficiency of gonadotropin-releasing hormone in humans and mice","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Fibroblast Growth Factor Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":393,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Dental and Craniofacial Research; Lastentautien Tutkimussäätiö; National Institutes of Health; Helsingin Sanomain Säätiö; National Center for Research Resources","keywords":"Kallmann syndrome; Hypogonadotropic hypogonadism; Endocrinology; Internal medicine; Biology; Gonadotropin-releasing hormone; Anosmia; Missense mutation; Kisspeptin; Proband; Mutation; Hypothalamus; Genetics; Luteinizing hormone; Medicine; Hormone; Gene","score_opus":0.08018849530208097,"score_gpt":0.36314998763855927,"score_spread":0.28296149233647827,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2101121629","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99852055,0.00084428414,0.0003573121,0.00013999896,0.000042258333,0.000065556385,0.0000019089453,0.0000015249101,0.00002658716],"genre_scores_gemma":[0.9961806,0.0007172709,0.0028466408,0.00007928926,0.00014768931,6.30248e-7,0.00000506092,0.000009623128,0.000013172766],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998316,0.00023030094,0.00093633134,0.00014272379,0.0002405155,0.00013413299],"domain_scores_gemma":[0.99885947,0.00017732082,0.00047993875,0.000098457655,0.00023364821,0.00015116953],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00065230764,0.00008112419,0.00024730116,0.00010097368,0.000042229938,0.00000861598,0.00011673963,0.00013642323,0.0000032809153],"category_scores_gemma":[0.0023309072,0.000065569286,0.00008942186,0.00012166409,0.0003569193,0.000015757856,0.000039622562,0.000249553,6.615722e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015757814,0.00006040502,0.21373835,0.000020678619,0.000013235753,0.000009445625,0.00005855925,0.00010253088,0.7855101,0.00001976349,0.00008104478,0.00022829205],"study_design_scores_gemma":[0.0011196912,0.0009424312,0.848902,0.000103926766,0.000013262221,0.000043217427,0.000044258002,0.0001100672,0.14820969,0.00032361184,0.000101845144,0.00008600495],"about_ca_topic_score_codex":0.000038532206,"about_ca_topic_score_gemma":0.000011966568,"teacher_disagreement_score":0.63730043,"about_ca_system_score_codex":0.000011818543,"about_ca_system_score_gemma":0.0002915649,"threshold_uncertainty_score":0.2790482},"labels":[],"label_agreement":null},{"id":"W2101186431","doi":"10.1172/jci23858","title":"Cholesterol binding, efflux, and a PDZ-interacting domain of scavenger receptor–BI mediate HDL-initiated signaling","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cholesterol and Lipid Metabolism","field":"Medicine","cited_by":153,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"National Heart, Lung, and Blood Institute; National Institutes of Health; Pfizer; American Heart Association","keywords":"Scavenger receptor; Cholesterol; Enos; PDZ domain; Cell biology; Chemistry; Biochemistry; Receptor; ABCA1; Biology; Biophysics; Lipoprotein; Transporter; Nitric oxide synthase","score_opus":0.08428455165070087,"score_gpt":0.3804750888605374,"score_spread":0.2961905372098365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2101186431","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99475765,0.0002245459,0.00011238483,0.0036249075,0.00093240786,0.00016350113,0.0000040505124,0.00001620587,0.00016433807],"genre_scores_gemma":[0.985499,0.00024361782,0.009634727,0.0012534154,0.0032331578,0.0000017992471,0.000012001972,0.00002616681,0.00009609898],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9963039,0.0003729593,0.0024201905,0.00020286058,0.0004976215,0.0002024485],"domain_scores_gemma":[0.99593145,0.00097334787,0.0020447457,0.00015974583,0.0004115703,0.00047913822],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0037403065,0.00017715587,0.0008667142,0.00025468468,0.00005223449,0.00003703801,0.00010439233,0.00022374674,0.00008602799],"category_scores_gemma":[0.0032526986,0.000138749,0.00026513787,0.00019830572,0.00022993679,0.0004790754,0.000037350597,0.0008623706,0.000017874829],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013159057,0.0007325077,0.41119087,0.00041664115,0.00063441525,0.000023844317,0.0047922507,0.00014018592,0.48947573,0.00010922774,0.0025208143,0.08864762],"study_design_scores_gemma":[0.028069815,0.0030519613,0.71800506,0.008908597,0.0014161484,0.0008093869,0.001365035,0.0021267547,0.19438636,0.00093626714,0.04024487,0.0006797303],"about_ca_topic_score_codex":0.0000060048833,"about_ca_topic_score_gemma":0.000004153821,"teacher_disagreement_score":0.30681422,"about_ca_system_score_codex":0.00003538549,"about_ca_system_score_gemma":0.00016834123,"threshold_uncertainty_score":0.56580204},"labels":[],"label_agreement":null},{"id":"W2101378591","doi":"10.1172/jci15707","title":"The crucial role of Campylobacter jejuni genes in anti-ganglioside antibody induction in Guillain-Barré syndrome","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Peripheral Neuropathies and Disorders","field":"Medicine","cited_by":201,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"Nederlandse Organisatie voor Wetenschappelijk Onderzoek","keywords":"Campylobacter jejuni; Guillain-Barre syndrome; Gene; Antibody; Ganglioside; Microbiology; Campylobacter; Virology; Antibody response; Biology; Medicine; Immunology; Genetics; Bacteria","score_opus":0.03563511978455202,"score_gpt":0.35141922635300876,"score_spread":0.31578410656845673,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2101378591","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99486655,0.0006178479,0.000011603644,0.0036723404,0.00056955527,0.00014523904,8.5505366e-7,0.0000046748855,0.000111359936],"genre_scores_gemma":[0.99813634,0.00071974064,0.0003552852,0.0005040431,0.00025978783,0.0000010809568,0.0000024755022,0.000011125694,0.000010139276],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99762297,0.00020325612,0.0015764626,0.000125003,0.0003165308,0.0001558],"domain_scores_gemma":[0.99863636,0.00017877074,0.00071659486,0.00014896224,0.00018863796,0.00013064759],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013859685,0.00010143082,0.0004654896,0.00016500504,0.00003917777,0.000016513737,0.00011546832,0.00015187066,0.000008560297],"category_scores_gemma":[0.0019724264,0.000068615525,0.00016186501,0.00036745146,0.0002545614,0.00018876768,0.000023067854,0.0004997972,0.0000020189066],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00058358005,0.00045375898,0.91778165,0.000045306093,0.000041953896,0.00024317087,0.00044172548,0.0015459753,0.070089586,0.00040713634,0.00007650503,0.008289664],"study_design_scores_gemma":[0.0034338105,0.0009034672,0.98276365,0.00039167842,0.000032273332,0.00022471914,0.0004956302,0.00011683202,0.003362213,0.007784529,0.0004150082,0.000076211516],"about_ca_topic_score_codex":0.00018669345,"about_ca_topic_score_gemma":0.00032574972,"teacher_disagreement_score":0.06672737,"about_ca_system_score_codex":0.000051308074,"about_ca_system_score_gemma":0.00033660667,"threshold_uncertainty_score":0.279806},"labels":[],"label_agreement":null},{"id":"W2101998219","doi":"10.1172/jci14036","title":"Targeted expression of a human pituitary tumor–derived isoform of FGF receptor-4 recapitulates pituitary tumorigenesis","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Fibroblast Growth Factor Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":180,"is_retracted":true,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Mount Sinai Hospital; Ontario Institute for Cancer Research; University of Toronto","funders":"Medical Research Council; Medical Research Council Canada","keywords":"Gene isoform; Fibroblast growth factor receptor 4; Biology; Pituitary tumors; Carcinogenesis; Pituitary gland; Cancer research; Receptor; Fibroblast growth factor receptor; In vivo; Cell biology; Fibroblast growth factor; Endocrinology; Cancer; Gene; Genetics; Hormone","score_opus":0.06421812979329598,"score_gpt":0.34586182030217427,"score_spread":0.2816436905088783,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2101998219","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983538,0.000776732,0.000089917135,0.00023093102,0.00025377973,0.00016303509,0.000016356356,0.000005873026,0.000109577224],"genre_scores_gemma":[0.9951416,0.00032677228,0.0038158647,0.0000917843,0.00046274776,0.0000031540487,0.00004746709,0.00002891987,0.0000816387],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9964196,0.0004336697,0.0021007988,0.00025897563,0.0005466838,0.00024024158],"domain_scores_gemma":[0.9968774,0.00018321842,0.0016444286,0.00035219602,0.0006661886,0.00027658773],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013641067,0.00018624862,0.00059638504,0.00016848985,0.000066564,0.000010652911,0.00039322505,0.00025737224,0.0002420783],"category_scores_gemma":[0.0019143634,0.00015730898,0.00038531373,0.00019881125,0.0004670482,0.000040447972,0.0001241036,0.00038181423,0.000006915918],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020893627,0.00021209511,0.03608841,0.000100811616,0.000075083306,0.000006193939,0.00011649025,0.00004920683,0.9578322,0.000011901607,0.004766177,0.00053245114],"study_design_scores_gemma":[0.0010168965,0.0023249458,0.069203794,0.0002818048,0.000032028383,0.000016049853,0.00008254726,0.00008194283,0.92593735,0.000555559,0.00032214174,0.00014491181],"about_ca_topic_score_codex":0.000021771923,"about_ca_topic_score_gemma":0.000004710565,"teacher_disagreement_score":0.03311538,"about_ca_system_score_codex":0.000020373907,"about_ca_system_score_gemma":0.00014017534,"threshold_uncertainty_score":0.6414874},"labels":[],"label_agreement":null},{"id":"W2102277066","doi":"10.1172/jci8316","title":"Hypoxia-inducible factor-1 mediates the biological effects of oxygen on human trophoblast differentiation through TGFβ3","year":2000,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pregnancy and preeclampsia studies","field":"Medicine","cited_by":639,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"Medical Research Council; Medical Research Council Canada","keywords":"Trophoblast; Oxygen tension; Placentation; Biology; Cell biology; Andrology; Endocrinology; Gelatinase; Internal medicine; Hypoxia (environmental); Placenta; Fetus; Matrix metalloproteinase; Chemistry; Pregnancy; Medicine; Biochemistry; Oxygen","score_opus":0.15376582541686828,"score_gpt":0.38831562163423977,"score_spread":0.2345497962173715,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2102277066","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99551713,0.0007148252,0.00006277493,0.00232005,0.00037073507,0.0002505429,0.0000028054644,0.000013627215,0.0007475222],"genre_scores_gemma":[0.9967554,0.0011844896,0.00031956006,0.0009026478,0.0007284214,0.00000509211,0.0000075674307,0.000009383499,0.00008741562],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9975911,0.00046029998,0.0012465288,0.00015951379,0.0003977687,0.00014483508],"domain_scores_gemma":[0.9968578,0.0018704198,0.00079385686,0.00021187596,0.00015132935,0.00011467941],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006606527,0.00014556514,0.0006212303,0.00004731723,0.00011268634,0.000012154777,0.00014965204,0.00020662937,0.0001283873],"category_scores_gemma":[0.0019657377,0.00007603732,0.00031813336,0.00014431572,0.00035436224,0.00013513397,0.000020254802,0.0005702129,0.000015744197],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0028543703,0.0023875122,0.7133019,0.00065246294,0.0018477091,0.000078123216,0.005601828,0.00011370497,0.18836267,0.00389331,0.0075041708,0.07340224],"study_design_scores_gemma":[0.0019979707,0.0029284786,0.938539,0.0007305194,0.00016546113,0.000011394169,0.000039851013,0.000027683236,0.043899655,0.011027739,0.0005521532,0.00008007557],"about_ca_topic_score_codex":0.000007536115,"about_ca_topic_score_gemma":0.00000222143,"teacher_disagreement_score":0.22523713,"about_ca_system_score_codex":0.000021925785,"about_ca_system_score_gemma":0.00006819812,"threshold_uncertainty_score":0.3100712},"labels":[],"label_agreement":null},{"id":"W2104284972","doi":"10.1172/jci64124","title":"Advances in stem cell therapy for spinal cord injury","year":2012,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":241,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Western Hospital","funders":"Krembil Foundation; Ontario Neurotrauma Foundation; Christopher and Dana Reeve Foundation","keywords":"Stem cell; Spinal cord injury; Stem-cell therapy; Embryonic stem cell; Medicine; Transplantation; Reprogramming; Cell therapy; Neuroscience; Spinal cord; Cell; Psychology; Biology; Surgery; Psychiatry","score_opus":0.209234716721886,"score_gpt":0.4937144618491716,"score_spread":0.2844797451272856,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2104284972","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0033618005,0.9949048,0.00025038442,0.00004333076,0.00074342376,0.0005703629,0.000015530746,0.0000018265985,0.000108498665],"genre_scores_gemma":[0.00085873704,0.99593604,0.0009625907,0.00008728641,0.0018323169,0.000029133802,0.00005301177,0.000035783745,0.00020511626],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9964868,0.00061377726,0.0020869835,0.00025483672,0.0002956693,0.0002619548],"domain_scores_gemma":[0.99710983,0.00022080462,0.0019432339,0.00023514137,0.0002473304,0.00024363458],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0032242704,0.00023036725,0.0011439259,0.00014925821,0.000028677792,0.000023978728,0.00040638808,0.00057314424,0.0000053739245],"category_scores_gemma":[0.00023579563,0.000169877,0.0007263093,0.00014237608,0.00013981959,0.000022168497,0.000058421556,0.00060537684,0.000008856993],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006295393,0.00010676905,0.0002026723,0.002127783,0.00003615695,0.0000019937138,0.0000018433389,0.0000010602108,0.0001855994,0.0000075923826,0.000458897,0.9962401],"study_design_scores_gemma":[0.0006134425,0.003738767,0.000058462105,0.0018651165,0.00009107228,0.00001616711,0.0000046587443,0.0000025995985,0.0006401459,0.00011956698,0.9926777,0.00017230777],"about_ca_topic_score_codex":6.08005e-7,"about_ca_topic_score_gemma":0.0000018109554,"teacher_disagreement_score":0.99606776,"about_ca_system_score_codex":0.000032734195,"about_ca_system_score_gemma":0.0007301877,"threshold_uncertainty_score":0.6927383},"labels":[],"label_agreement":null},{"id":"W2105330325","doi":"10.1172/jci16100","title":"The α1A/C- and α1B-adrenergic receptors are required for physiological cardiac hypertrophy in the double-knockout mouse","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":185,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of California, San Francisco; National Heart, Lung, and Blood Institute; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Heart and Stroke Foundation of Canada; American Heart Association; National Institutes of Health; National Science Foundation","keywords":"Internal medicine; Endocrinology; Muscle hypertrophy; Myocyte; Heart rate; Pressure overload; Cardiac function curve; Receptor; Knockout mouse; Stimulation; Biology; Cardiac myocyte; Genetically modified mouse; Blood pressure; Medicine; Heart failure; Cardiac hypertrophy; Transgene","score_opus":0.08104296557997151,"score_gpt":0.3382082378545646,"score_spread":0.25716527227459307,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2105330325","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99698305,0.0010607729,0.00034581276,0.0007825888,0.0006006778,0.00018084572,0.0000020483274,0.000001964505,0.000042267457],"genre_scores_gemma":[0.9958785,0.0011823593,0.0014826012,0.00061618217,0.00067502336,0.00001481824,0.000008643733,0.000010768744,0.00013109444],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99827737,0.00050207315,0.00073664734,0.00016916197,0.00016117771,0.00015356697],"domain_scores_gemma":[0.9987945,0.00027946397,0.00052442413,0.00015747396,0.00015352125,0.0000906078],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0027666078,0.000108002234,0.0002646356,0.000020491332,0.00013864307,0.000052518903,0.00017556534,0.00019467206,0.0000040847294],"category_scores_gemma":[0.0014357871,0.000055991375,0.00022579348,0.00007014343,0.0001692543,0.00001027369,0.000019720996,0.00021817349,6.5015166e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009962963,0.0001387087,0.008703489,0.000023386434,0.00015763659,0.0000034214188,0.00017364352,0.00071250164,0.96628004,0.008461929,0.009457502,0.0048914384],"study_design_scores_gemma":[0.008168214,0.005408153,0.018538382,0.00015401925,0.00021552191,0.00005395813,0.002294604,0.00051142025,0.75596416,0.036025494,0.17196724,0.0006988252],"about_ca_topic_score_codex":0.0000022670647,"about_ca_topic_score_gemma":0.0000033530212,"teacher_disagreement_score":0.21031587,"about_ca_system_score_codex":0.000007531282,"about_ca_system_score_gemma":0.000077002995,"threshold_uncertainty_score":0.2283262},"labels":[],"label_agreement":null},{"id":"W2106431826","doi":"10.1172/jci64560","title":"HERV-K–specific T cells eliminate diverse HIV-1/2 and SIV primary isolates","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":95,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Maple Leaf Medical Clinic; Simon Fraser University; St. Michael's Hospital","funders":"National Institute of Allergy and Infectious Diseases; Ontario HIV Treatment Network; Ontario Innovation Trust; National Institutes of Health; Pfizer","keywords":"Biology; Virology; Cytotoxic T cell; CD8; Simian immunodeficiency virus; Immune system; T cell; Long terminal repeat; Antigen; Virus; Genome; In vitro; Immunology; Genetics; Gene","score_opus":0.07784058759385254,"score_gpt":0.2911674121585729,"score_spread":0.21332682456472035,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106431826","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99536014,0.00047424372,0.000009249464,0.003235589,0.0005387557,0.00005929593,0.000008822478,0.000008287486,0.00030559767],"genre_scores_gemma":[0.99575067,0.00052847614,0.0014123432,0.0005940772,0.0015794783,6.9787575e-7,0.000010243903,7.7592836e-7,0.00012322831],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987821,0.0001513837,0.0006616252,0.00009725329,0.00016020416,0.00014744888],"domain_scores_gemma":[0.9985187,0.0005780553,0.00046071815,0.000031248874,0.00012284025,0.0002884258],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008996822,0.00008256747,0.00021550934,0.000011209265,0.00010257615,0.000039270704,0.000104350496,0.00010773555,0.00017145362],"category_scores_gemma":[0.00015729756,0.000032359763,0.00011584413,0.00012266298,0.00011623026,0.00030522945,0.000046415647,0.0001947396,0.00003980649],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008651165,0.00035617533,0.48407117,0.000015982094,0.00005226884,0.0000047545036,0.0004759148,0.00001698303,0.40511322,0.0009241512,0.0061745537,0.1027083],"study_design_scores_gemma":[0.00027785148,0.00030888282,0.9682334,0.000032036955,0.000036859154,0.000021447906,0.00017723863,0.00005191197,0.0032783905,0.002766584,0.024712248,0.00010315264],"about_ca_topic_score_codex":0.000004232466,"about_ca_topic_score_gemma":0.000005236802,"teacher_disagreement_score":0.48416224,"about_ca_system_score_codex":0.000010954304,"about_ca_system_score_gemma":0.000013288608,"threshold_uncertainty_score":0.18772969},"labels":[],"label_agreement":null},{"id":"W2106758941","doi":"10.1172/jci73451","title":"DEAD-box helicase DP103 defines metastatic potential of human breast cancers","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":131,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Research in Immunology and Cancer","funders":"National Medical Research Council; National Institute of General Medical Sciences; Medical Research Council; Ministry of Education, India; Cancer Science Institute of Singapore, National University of Singapore; National Cancer Institute; National Institutes of Health","keywords":"Breast cancer; Metastasis; MMP9; Cancer research; Oncogene; Medicine; Cancer; PAK1; Metastatic breast cancer; NF-κB; Oncology; Signal transduction; Internal medicine; Downregulation and upregulation; Biology; Cell cycle; Inflammation","score_opus":0.054458797135362655,"score_gpt":0.3557076958244294,"score_spread":0.30124889868906674,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106758941","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99647695,0.00017861219,0.0023504146,0.00042346117,0.0002674399,0.000072949864,0.000013920032,0.0000029510556,0.00021328541],"genre_scores_gemma":[0.9941013,0.00006946706,0.0043754396,0.00050969823,0.0008481716,0.0000021301303,0.000025900365,0.000012318522,0.00005558678],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99812955,0.0003397527,0.0010558497,0.00013991162,0.00021421244,0.000120746015],"domain_scores_gemma":[0.99823606,0.000066011286,0.0010004097,0.00016832491,0.0003371743,0.00019200188],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001543839,0.00010308009,0.00032042793,0.000049335038,0.00004676022,0.000014551804,0.00016236467,0.00011416059,0.000027271308],"category_scores_gemma":[0.00087824697,0.000085122316,0.0002411147,0.000067707035,0.00021685964,0.000010265099,0.000035512632,0.0001793142,0.0000036819704],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021186758,0.00009903234,0.012355776,0.000074742675,0.00014956664,0.000006359342,0.000033452834,0.00029560903,0.97426414,0.0007070676,0.0017360384,0.010066329],"study_design_scores_gemma":[0.0034152314,0.003667242,0.038962144,0.00023311163,0.0003181824,0.0004091064,0.00007920547,0.00064762565,0.93626606,0.010954812,0.0047157165,0.00033155165],"about_ca_topic_score_codex":0.000028563594,"about_ca_topic_score_gemma":0.000019788322,"teacher_disagreement_score":0.037998088,"about_ca_system_score_codex":0.000008713607,"about_ca_system_score_gemma":0.00020849597,"threshold_uncertainty_score":0.34711874},"labels":[],"label_agreement":null},{"id":"W2106984011","doi":"10.1172/jci25483","title":"Extrapancreatic incretin receptors modulate glucose homeostasis, body weight, and energy expenditure","year":2006,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Apelin-related biomedical research","field":"Medicine","cited_by":286,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Banting and Best Diabetes Centre, University of Toronto; Canadian Institutes of Health Research; Canadian Diabetes Association","keywords":"Incretin; Internal medicine; Endocrinology; Glucose homeostasis; Resistin; Energy homeostasis; Receptor; Gastric inhibitory polypeptide; Insulin resistance; Insulin; Biology; Chemistry; Type 2 diabetes; Glucagon; Diabetes mellitus; Medicine; Adipokine","score_opus":0.03663757570630926,"score_gpt":0.3570815698143817,"score_spread":0.32044399410807245,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106984011","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98731524,0.0043885754,0.000504011,0.00655001,0.0004937565,0.00010291841,0.0000028154316,0.000023921553,0.00061872485],"genre_scores_gemma":[0.9832822,0.007256851,0.0053540166,0.00092040765,0.0022021886,0.0000031630761,0.000050851555,0.00003144088,0.0008988631],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99599165,0.0004395059,0.0019963305,0.0002613664,0.0010185902,0.00029255403],"domain_scores_gemma":[0.99664545,0.001085578,0.00086825335,0.00021322678,0.00038424903,0.00080322626],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026072832,0.0001874467,0.00073093566,0.00027628793,0.00007517845,0.000042278913,0.00014275216,0.00049164414,0.00022421173],"category_scores_gemma":[0.0034416327,0.00013311973,0.00022819002,0.00033699247,0.0006584596,0.00024043026,0.000053071344,0.0010552645,0.000017561411],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0049234745,0.0018175193,0.24919079,0.00046068142,0.0012138273,0.0014415786,0.0002990048,0.000030597843,0.1469843,0.0066843373,0.1889223,0.3980316],"study_design_scores_gemma":[0.010837143,0.004007418,0.7618469,0.0017459937,0.00079330546,0.0007595008,0.00013254547,0.0069270646,0.017392151,0.030077308,0.16496885,0.00051181554],"about_ca_topic_score_codex":0.000097151176,"about_ca_topic_score_gemma":0.0000060709826,"teacher_disagreement_score":0.5126561,"about_ca_system_score_codex":0.00007305364,"about_ca_system_score_gemma":0.00040171502,"threshold_uncertainty_score":0.5428465},"labels":[],"label_agreement":null},{"id":"W2107749499","doi":"10.1172/jci43030","title":"Caveat mTOR: aberrant signaling disrupts corticogenesis","year":2010,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Tuberous Sclerosis Complex Research","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; University of Toronto; King's College London","keywords":"Corticogenesis; PI3K/AKT/mTOR pathway; Megalencephaly; Mechanistic target of rapamycin; Epilepsy; Cancer research; Signal transducing adaptor protein; Forebrain; Phenotype; Signal transduction; Neuroscience; Medicine; Biology; Cell biology; Stem cell; Genetics; Central nervous system; Progenitor cell","score_opus":0.2119311959351175,"score_gpt":0.4246206764255147,"score_spread":0.2126894804903972,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107749499","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.52170956,0.00021861738,0.00013259288,0.47524527,0.0021377334,0.0003390294,0.0000116369865,0.000027324117,0.000178253],"genre_scores_gemma":[0.16677596,0.00037885553,0.013950792,0.7663289,0.049678814,0.000015667523,0.00019334834,0.00023116724,0.002446548],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99228144,0.00070796034,0.0038778745,0.00043955137,0.0021717297,0.0005214381],"domain_scores_gemma":[0.9918625,0.0024817823,0.0027321605,0.00065095065,0.0015602782,0.0007123711],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.0036183973,0.00038325018,0.0018054117,0.0004244592,0.00011208274,0.00011583786,0.0004617023,0.0027327773,0.00045361824],"category_scores_gemma":[0.0071132365,0.00029362165,0.0010686982,0.0002946742,0.00070957426,0.0002050918,0.000093319,0.013642036,0.00012700021],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024306729,0.00014859471,0.03411949,0.00035776102,0.00046981336,0.0013476823,0.00009202296,0.000010018523,0.03334992,0.000009061238,0.9232087,0.0066438667],"study_design_scores_gemma":[0.0062090796,0.0036366577,0.17839572,0.0040119267,0.0027582278,0.0026662615,0.000040297902,0.0008016239,0.010548979,0.0027472451,0.78723586,0.000948102],"about_ca_topic_score_codex":0.00003860943,"about_ca_topic_score_gemma":0.000011359797,"teacher_disagreement_score":0.3549336,"about_ca_system_score_codex":0.00014702736,"about_ca_system_score_gemma":0.0014506716,"threshold_uncertainty_score":0.9999516},"labels":[],"label_agreement":null},{"id":"W2107808656","doi":"10.1172/jci42869","title":"BCL6 repression of EP300 in human diffuse large B cell lymphoma cells provides a basis for rational combinatorial therapy","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Histone Deacetylase Inhibitors Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":121,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of General Medical Sciences; Weill Cornell Medical College; National Cancer Institute; National Institutes of Health; College of Veterinary Medicine, Cornell University; Memorial Sloan-Kettering Cancer Center; Geoffrey Beene Cancer Research Center; Commonwealth Foundation; Leukemia and Lymphoma Society; Michael Smith Health Research BC; Canadian Institutes of Health Research; Chemotherapy Foundation","keywords":"Biology; Cancer research; BCL6; P300-CBP Transcription Factors; Histone acetyltransferase; Histone deacetylase inhibitor; Histone deacetylase; Molecular biology; Acetylation; B cell; Immunology; Histone; Genetics; Gene; Antibody; Germinal center","score_opus":0.04215585285881388,"score_gpt":0.3809938247419264,"score_spread":0.3388379718831125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107808656","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99830055,0.00006552027,0.00020785707,0.00026994108,0.0007927779,0.00027805063,0.000016142327,0.0000020853865,0.00006705067],"genre_scores_gemma":[0.9966027,0.000052434498,0.0020200207,0.00010021318,0.0010524138,0.000012915089,0.00003518884,0.000016638425,0.00010744128],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978191,0.00027807543,0.0012231978,0.00020018341,0.00032718328,0.0001522301],"domain_scores_gemma":[0.99804705,0.00025228533,0.0008382166,0.00022047346,0.00049375254,0.00014823237],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025566986,0.000102297636,0.0002975095,0.000099063065,0.00006109582,0.000018395598,0.0002064858,0.00031742788,0.000012484014],"category_scores_gemma":[0.0021500424,0.000085910695,0.00023096631,0.00008915148,0.00019282055,0.000019191002,0.00004095845,0.00027590903,9.563231e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00054881285,0.0014595566,0.0053360853,0.000027623171,0.00001635834,0.000001880292,0.000072328025,0.000009847932,0.9884033,0.0001913506,0.003300894,0.00063192635],"study_design_scores_gemma":[0.00974504,0.0010538473,0.0068688747,0.000050085528,0.000008751713,0.0000029541322,0.00002186904,0.00020663782,0.97583246,0.001370677,0.0047474825,0.00009132016],"about_ca_topic_score_codex":0.000012869422,"about_ca_topic_score_gemma":0.000028638433,"teacher_disagreement_score":0.012570877,"about_ca_system_score_codex":0.00001721358,"about_ca_system_score_gemma":0.0004899198,"threshold_uncertainty_score":0.35033366},"labels":[],"label_agreement":null},{"id":"W2107984202","doi":"10.1172/jci12067","title":"Spontaneous air space enlargement in the lungs of mice lacking tissue inhibitor of metalloproteinases-3 (TIMP-3)","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Peptidase Inhibition and Analysis","field":"Medicine","cited_by":247,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Amgen (Canada); Montreal Children's Hospital; University of Toronto; Ontario Institute for Cancer Research","funders":"Canadian Institutes of Health Research; Amgen","keywords":"Matrix metalloproteinase; Air space; Tissue inhibitor of metalloproteinase; Chemistry; Pathology; Cell biology; Biology; Medicine; Biochemistry","score_opus":0.05975413769542971,"score_gpt":0.37796868422249724,"score_spread":0.31821454652706754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107984202","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98899925,0.00012992285,0.00044240494,0.009658102,0.00006263855,0.00018622281,0.0000023706984,0.0000041057683,0.0005150127],"genre_scores_gemma":[0.9948808,0.00010451329,0.0030975265,0.0013504649,0.00036420298,0.0000018618945,0.0000066916996,0.000008264649,0.0001857079],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99687463,0.00036147557,0.0018991905,0.00011771444,0.000626054,0.000120949335],"domain_scores_gemma":[0.9973254,0.0004887956,0.001468254,0.00017417566,0.0004046629,0.00013871238],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00319474,0.00010561731,0.00062696426,0.00022086829,0.000022001483,0.0000074543714,0.00012071069,0.000110817615,0.00012619061],"category_scores_gemma":[0.0024907955,0.00006998804,0.0003183254,0.0004547033,0.00018754276,0.00013600018,0.00001957233,0.00042008428,0.000005421934],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0037265227,0.004764924,0.17856856,0.0009574928,0.0011434512,0.008640341,0.0038989924,0.0011156034,0.7601221,0.0031203995,0.008883094,0.025058508],"study_design_scores_gemma":[0.018337158,0.009947781,0.3202564,0.0126653835,0.0025571575,0.009315898,0.0048476676,0.0040516853,0.58510184,0.00998909,0.022195576,0.0007343592],"about_ca_topic_score_codex":0.000050259354,"about_ca_topic_score_gemma":0.000043644497,"teacher_disagreement_score":0.17502028,"about_ca_system_score_codex":0.000037705086,"about_ca_system_score_gemma":0.00017666983,"threshold_uncertainty_score":0.29818946},"labels":[],"label_agreement":null},{"id":"W2108141823","doi":"10.1172/jci21838","title":"High-level β-globin expression and preferred intragenic integration after lentiviral transduction of human cord blood stem cells","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":114,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"National Heart, Lung, and Blood Institute; Genentech; National Institutes of Health; Stem Cell Network","keywords":"Biology; Haematopoiesis; Cord blood; Transgene; Stem cell; Viral vector; Transduction (biophysics); Molecular biology; Genetic enhancement; Progenitor cell; Globin; Transplantation; CD34; Myeloid; Gene; Virology; Cancer research; Immunology; Cell biology; Genetics; Recombinant DNA; Medicine","score_opus":0.08391455691124541,"score_gpt":0.36417505667063726,"score_spread":0.2802604997593918,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2108141823","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971768,0.0002808878,0.0019377818,0.00018093883,0.00024495934,0.00015896288,0.000010511029,0.0000033518759,0.0000057800194],"genre_scores_gemma":[0.9973238,0.0003051845,0.0018158455,0.00007333546,0.00039253876,0.000005035189,0.000020154315,0.000013151803,0.000050918243],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99808186,0.00031465298,0.0010075638,0.00019808183,0.00027705324,0.0001207818],"domain_scores_gemma":[0.9988311,0.000029325343,0.0005800892,0.00016919278,0.0002576669,0.00013263048],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011060096,0.000120459736,0.00026943543,0.00008181303,0.00004201865,0.000021944266,0.00012416617,0.000222447,0.000013775265],"category_scores_gemma":[0.000075603115,0.000100245175,0.00014846011,0.000083902276,0.0002261169,0.000032555177,0.000026289825,0.00028556713,0.0000010510342],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023735913,0.00016219896,0.0011388416,0.000023018712,0.00006211857,0.0000024570097,0.000083762796,0.000120263336,0.98789436,0.00002014902,0.000056464807,0.008062756],"study_design_scores_gemma":[0.0025524779,0.0073162112,0.008472279,0.00012848242,0.000061721155,0.000013322374,0.000047903868,0.000009005816,0.9799238,0.001363048,0.000018857967,0.00009292123],"about_ca_topic_score_codex":0.000010259305,"about_ca_topic_score_gemma":0.00006010131,"teacher_disagreement_score":0.007970609,"about_ca_system_score_codex":0.000014926694,"about_ca_system_score_gemma":0.0001571767,"threshold_uncertainty_score":0.40878797},"labels":[],"label_agreement":null},{"id":"W2108409620","doi":"10.1172/jci13359","title":"Dual gene therapy with SERCA1 and Kir2.1 abbreviates excitation without suppressing contractility","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cardiac electrophysiology and arrhythmias","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; Universidad Nacional de La Plata; National Heart, Lung, and Blood Institute; Heart and Stroke Foundation of Canada; Johns Hopkins University; American Heart Association","keywords":"Contractility; Repolarization; Heart failure; Medicine; Calcium; Heartbeat; Internal medicine; Cardiology; Potassium channel; Endocrinology; Electrophysiology; Computer science","score_opus":0.08638200485610341,"score_gpt":0.3674533772217543,"score_spread":0.2810713723656509,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2108409620","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99483776,0.0012224859,0.00015212792,0.0033747228,0.00015249722,0.00013502876,0.0000010051263,0.000011301722,0.00011305162],"genre_scores_gemma":[0.99330527,0.0012453024,0.0032423744,0.0012396545,0.0008909779,0.0000016145044,0.000004431971,0.000010096205,0.000060268765],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99855304,0.00026929873,0.00071752566,0.00013836267,0.00020677899,0.00011497492],"domain_scores_gemma":[0.9982941,0.00051745627,0.00060544105,0.00010398191,0.00029115033,0.00018788195],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000874251,0.00010220659,0.0004935385,0.00005135174,0.000066748304,0.000021861148,0.000022901502,0.00013253519,0.00003785127],"category_scores_gemma":[0.0007521205,0.00006690441,0.00011811007,0.00008498859,0.0002955581,0.0002855367,0.0000054241173,0.0004860788,0.0000034709342],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005503806,0.0005285779,0.7522654,0.000104212646,0.00083122373,0.0004566317,0.0010511596,0.00011111144,0.15711267,0.00016990415,0.0018638804,0.08000145],"study_design_scores_gemma":[0.0041148392,0.0019704937,0.97898215,0.00017610777,0.00017421339,0.0013349145,0.000035442263,0.0011474587,0.009679131,0.0019018884,0.00038459763,0.00009876056],"about_ca_topic_score_codex":0.0000023840093,"about_ca_topic_score_gemma":0.0000010554198,"teacher_disagreement_score":0.22671677,"about_ca_system_score_codex":0.000014580699,"about_ca_system_score_gemma":0.00007460894,"threshold_uncertainty_score":0.27282828},"labels":[],"label_agreement":null},{"id":"W2108595427","doi":"10.1172/jci32727","title":"Rational strain selection and engineering creates a broad-spectrum, systemically effective oncolytic poxvirus, JX-963","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":198,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"University of California, San Diego; Medical Research Council; Korea Science and Engineering Foundation; Dong-A University; Imperial College London; National Cancer Institute; National Institutes of Health; U.S. Department of Health and Human Services; Cancer Research UK; University of Pittsburgh","keywords":"Oncolytic virus; Vaccinia; Systemic administration; In vivo; Cancer; Cancer cell; Cancer research; Ex vivo; Virology; Biology; Medicine; Immunology; Virus; Gene; Internal medicine","score_opus":0.027545429648608146,"score_gpt":0.3584723242434685,"score_spread":0.33092689459486035,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2108595427","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99379075,0.00047021647,0.0049368306,0.00035555876,0.00017667684,0.00022217713,0.000003429199,0.000007706751,0.000036658024],"genre_scores_gemma":[0.99670297,0.00011189703,0.0017092052,0.00020422308,0.0011877163,0.000004386478,0.000013161294,0.000018062286,0.0000483939],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982089,0.00024124148,0.000859767,0.00019597443,0.00030440468,0.00018970329],"domain_scores_gemma":[0.998616,0.00037778149,0.0003958388,0.00009277766,0.0002653748,0.0002522622],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0038232075,0.0001243631,0.0002569977,0.00011333349,0.000056585235,0.000042140244,0.00010469612,0.00022377695,0.000008654522],"category_scores_gemma":[0.0015928673,0.000111017456,0.00012359301,0.00014620602,0.000099623016,0.00001987481,0.000025051024,0.00037580964,0.0000028469558],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018954296,0.00006183209,0.019225089,0.00004208253,0.00015796987,0.0000071957174,0.000038056693,0.0008725369,0.9725205,0.0001545331,0.00013365812,0.0048911734],"study_design_scores_gemma":[0.0037581455,0.014258341,0.23297249,0.00029623872,0.00009674635,0.00031246283,0.000059882655,0.0046228403,0.74049455,0.001444009,0.0013226711,0.00036161998],"about_ca_topic_score_codex":0.0000060048988,"about_ca_topic_score_gemma":0.000069884154,"teacher_disagreement_score":0.23202589,"about_ca_system_score_codex":0.000052915948,"about_ca_system_score_gemma":0.00025162898,"threshold_uncertainty_score":0.45271605},"labels":[],"label_agreement":null},{"id":"W2108729511","doi":"10.1172/jci36411","title":"Mice that exclusively express TLR4 on endothelial cells can efficiently clear a lethal systemic Gram-negative bacterial infection","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Neutrophil, Myeloperoxidase and Oxidative Mechanisms","field":"Immunology and Microbiology","cited_by":159,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institutes of Health; National Cancer Institute; Canadian Institutes of Health Research; Fondation pour la Recherche Médicale; Canadian Association of Gastroenterology","keywords":"Immune system; TLR4; Biology; Bone marrow; Innate immune system; Immunology; Lipopolysaccharide; Endothelium; Microbiology; Systemic administration; Inflammation; In vivo","score_opus":0.055540186694940284,"score_gpt":0.3141718304890996,"score_spread":0.2586316437941593,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2108729511","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938002,0.00004609053,0.00044613943,0.0007593761,0.004393588,0.00032475818,0.000046429763,0.00003419834,0.00014922467],"genre_scores_gemma":[0.9971689,0.00009238396,0.0003796551,0.0011948214,0.00088855653,0.0000038059138,0.000025010597,0.00001979464,0.00022709882],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9963412,0.0014725922,0.0013639079,0.00033332114,0.00017495187,0.00031397393],"domain_scores_gemma":[0.99690366,0.0008041686,0.0016150362,0.00019831542,0.00035194834,0.00012684394],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014606712,0.00027259302,0.00071004254,0.00021513451,0.00020152231,0.000053255226,0.00025650286,0.0004495739,0.00010407105],"category_scores_gemma":[0.00078155263,0.00021573245,0.0003463093,0.00016317265,0.00030326957,0.00026484116,0.00003812101,0.001022321,0.00015983038],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001865496,0.0002985984,0.0002772801,0.000013951323,0.00011737223,0.000031775686,0.0005983024,0.00010746077,0.9914309,0.0007104823,0.00069398026,0.0038544063],"study_design_scores_gemma":[0.0045302706,0.006061749,0.009704203,0.00041186577,0.00012832668,0.00020873538,0.00014303182,0.000011448207,0.9750265,0.0016350436,0.0018878937,0.00025096987],"about_ca_topic_score_codex":0.000045474677,"about_ca_topic_score_gemma":0.000007262651,"teacher_disagreement_score":0.016404431,"about_ca_system_score_codex":0.00009847279,"about_ca_system_score_gemma":0.00021769825,"threshold_uncertainty_score":0.8797314},"labels":[],"label_agreement":null},{"id":"W2108821770","doi":"10.1172/jci38902","title":"The type III histone deacetylase Sirt1 is essential for maintenance of T cell tolerance in mice","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Sirtuins and Resveratrol in Medicine","field":"Medicine","cited_by":286,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; Ottawa Regional Cancer Foundation; University of Ottawa","funders":"National Institute of Neurological Disorders and Stroke; National Institute of Allergy and Infectious Diseases; University of California, San Francisco; National Institutes of Health; National Institute of Diabetes and Digestive and Kidney Diseases; University of Missouri","keywords":"T cell; Histone deacetylase; Experimental autoimmune encephalomyelitis; Autoimmunity; Sirtuin 1; Peripheral tolerance; Cell biology; Biology; Immunology; Transcription factor; Downregulation and upregulation; Immune tolerance; Cancer research; Histone; Immune system; Biochemistry","score_opus":0.04355535484365589,"score_gpt":0.39007605912794396,"score_spread":0.34652070428428805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2108821770","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98082536,0.0013504453,0.00059263484,0.015898695,0.0008798826,0.00022254123,0.0000010873396,0.0000032565538,0.00022611256],"genre_scores_gemma":[0.9893314,0.0010848902,0.0038077773,0.003947365,0.0010147812,0.0000011542207,0.000002198289,0.0000076123633,0.0008027819],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99779767,0.00008255117,0.00153963,0.000114344584,0.00031784386,0.00014796079],"domain_scores_gemma":[0.99750704,0.0006186466,0.0009664351,0.00014477545,0.00060055853,0.00016256937],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020574788,0.000089421104,0.0004993532,0.00006413513,0.000043154432,0.0000071519326,0.00012033727,0.00012670508,0.00001059534],"category_scores_gemma":[0.0020807884,0.000052525207,0.00019378154,0.00018918404,0.00024265246,0.00007439558,0.0000069597645,0.0004372622,0.0000014348745],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.024846267,0.0023541397,0.02515566,0.0005250941,0.00026730352,0.0002030792,0.0025554386,0.0009467231,0.67129123,0.0021673818,0.19917005,0.07051762],"study_design_scores_gemma":[0.06762761,0.023983145,0.36611223,0.004930385,0.0012023423,0.00036872333,0.0012092924,0.037043285,0.4265102,0.019535486,0.050855473,0.00062181323],"about_ca_topic_score_codex":0.000008472678,"about_ca_topic_score_gemma":0.000005834387,"teacher_disagreement_score":0.34095657,"about_ca_system_score_codex":0.000036364578,"about_ca_system_score_gemma":0.0003174852,"threshold_uncertainty_score":0.24910484},"labels":[],"label_agreement":null},{"id":"W2109100155","doi":"10.1172/jci60132","title":"SIRT1 protects against emphysema via FOXO3-mediated reduction of premature senescence in mice","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Sirtuins and Resveratrol in Medicine","field":"Medicine","cited_by":351,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"National Heart, Lung, and Blood Institute; Medical Center, University of Rochester; National Institutes of Health; Helsingin ja Uudenmaan Sairaanhoitopiiri; National Institute of Environmental Health Sciences; University of Rochester","keywords":"Senescence; Sirtuin 1; Sirtuin; Inflammation; FOXO3; COPD; Medicine; Cancer research; Activator (genetics); Immunology; Biology; Internal medicine; NAD+ kinase; Cell biology; Signal transduction; Downregulation and upregulation; Biochemistry; Protein kinase B; Enzyme","score_opus":0.05654043227558687,"score_gpt":0.3677061157159902,"score_spread":0.31116568344040335,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109100155","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99456316,0.00080374425,0.00025568213,0.0026087887,0.0012330633,0.00038148268,9.290938e-7,0.00001061075,0.00014256166],"genre_scores_gemma":[0.9929768,0.00030615873,0.003684541,0.0006258987,0.0023196898,0.000003663114,0.000010817968,0.0000156358,0.000056835997],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99694496,0.00029869945,0.0018464382,0.00012997074,0.000572942,0.00020696183],"domain_scores_gemma":[0.99723405,0.00031896503,0.0013981254,0.00016261658,0.00049408054,0.00039215118],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0030830866,0.00013401534,0.00068878283,0.00021640983,0.000024333664,0.0000054891248,0.00009098768,0.00032146001,0.000013655322],"category_scores_gemma":[0.0044527776,0.00009255189,0.00018574482,0.00043376745,0.0002492467,0.000312977,0.000017163085,0.00092705846,0.000005348006],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011833498,0.0008711159,0.22262934,0.00048868294,0.00013329035,0.000042112602,0.0010768343,0.00010140343,0.7598318,0.000036160134,0.0017840986,0.011821808],"study_design_scores_gemma":[0.0067412793,0.0021574022,0.8625026,0.0039295,0.0002317097,0.00053833507,0.0005111801,0.0021206718,0.119722,0.0006033935,0.0007296656,0.00021227168],"about_ca_topic_score_codex":0.000010319463,"about_ca_topic_score_gemma":0.0000018577093,"teacher_disagreement_score":0.6401098,"about_ca_system_score_codex":0.000055710065,"about_ca_system_score_gemma":0.00027407234,"threshold_uncertainty_score":0.5330712},"labels":[],"label_agreement":null},{"id":"W2109114226","doi":"10.1172/jci23628","title":"Arsenic trioxide inhibits nuclear receptor function via SEK1/JNK-mediated RXRα phosphorylation","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Retinoids in leukemia and cellular processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research; National Institutes of Health; National Cancer Institute; Samuel Waxman Cancer Research Foundation","keywords":"Arsenic trioxide; Phosphorylation; Arsenic; Nuclear receptor; Cell biology; Retinoid X receptor; Chemistry; Cancer research; Receptor; Function (biology); Biology; Biochemistry; Transcription factor; Gene","score_opus":0.02352810111409606,"score_gpt":0.29550764753587094,"score_spread":0.2719795464217749,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109114226","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99400634,0.0006662236,0.0031348758,0.0010381948,0.0006906775,0.000102681515,0.0000021972824,0.000014209844,0.00034459762],"genre_scores_gemma":[0.9908448,0.00072756846,0.0041347165,0.0013633353,0.0024702975,0.0000019793013,0.000079536905,0.000028265233,0.0003494945],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99771416,0.00023024599,0.0013300269,0.0002328586,0.00032869694,0.00016399626],"domain_scores_gemma":[0.99795204,0.00009870215,0.0011125604,0.00018761073,0.0004296341,0.0002194341],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014967342,0.00015068769,0.00028086785,0.000065905035,0.00007534277,0.00003488101,0.00016109808,0.00040387284,0.000091437665],"category_scores_gemma":[0.0019104284,0.00013338162,0.00023827817,0.00016417405,0.00015895063,0.000043307053,0.00003489913,0.00040565274,0.00010385578],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00066059415,0.00013007478,0.006483801,0.000026656287,0.000105932864,0.0000018674809,0.00007496694,0.0005459906,0.94598347,0.000058186557,0.014058399,0.03187006],"study_design_scores_gemma":[0.0034075857,0.0019122608,0.010265621,0.00013110998,0.00016880443,0.00007017456,0.00010087758,0.0024960898,0.7024775,0.0013153729,0.27723888,0.00041571766],"about_ca_topic_score_codex":0.0000021556684,"about_ca_topic_score_gemma":0.0000037966518,"teacher_disagreement_score":0.26318046,"about_ca_system_score_codex":0.000039162976,"about_ca_system_score_gemma":0.00026721583,"threshold_uncertainty_score":0.5439145},"labels":[],"label_agreement":null},{"id":"W2109672256","doi":"10.1172/jci44999","title":"The protective role of TLR6 in a mouse model of asthma is mediated by IL-23 and IL-17A","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Asthma and respiratory diseases","field":"Medicine","cited_by":84,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Immunology; Asthma; Zymosan; House dust mite; Immune system; Inflammation; Lipopolysaccharide; Aspergillus fumigatus; Medicine; Biology; Allergy; In vitro; Allergen","score_opus":0.06801175901987838,"score_gpt":0.3355508324542272,"score_spread":0.2675390734343488,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109672256","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99846864,0.00042365506,0.00011198011,0.00061092695,0.000031073592,0.0002164736,0.000027854903,0.00000325969,0.00010611681],"genre_scores_gemma":[0.99871457,0.00017111497,0.00062651606,0.000340658,0.000060099475,0.0000038104015,0.0000017207881,0.000009142173,0.000072358176],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981134,0.00018976499,0.0012100072,0.0000954637,0.0002997325,0.00009162434],"domain_scores_gemma":[0.9980199,0.00026355835,0.001028205,0.00011638474,0.00035817723,0.00021377427],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011522638,0.00008080036,0.00039382768,0.0000736733,0.000025150943,0.000003859738,0.00007947892,0.00013181815,0.0000074207023],"category_scores_gemma":[0.002318127,0.00004828552,0.00012051114,0.00011024222,0.00045285493,0.00012169485,0.000021517686,0.00032770878,0.000001109817],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0076581966,0.0022892298,0.5293994,0.0003576952,0.00048099383,0.000022809581,0.008927795,0.00015557565,0.39130086,0.0006619613,0.003972758,0.054772753],"study_design_scores_gemma":[0.010059589,0.007567518,0.4605678,0.0010790871,0.00030824263,0.000025673851,0.0032500348,0.042008866,0.43600655,0.0374997,0.0013174289,0.00030949697],"about_ca_topic_score_codex":0.000020821293,"about_ca_topic_score_gemma":0.000007718512,"teacher_disagreement_score":0.06883157,"about_ca_system_score_codex":0.000013217602,"about_ca_system_score_gemma":0.0003325113,"threshold_uncertainty_score":0.2775182},"labels":[],"label_agreement":null},{"id":"W2109882045","doi":"10.1172/jci74985","title":"Mitophagy-dependent necroptosis contributes to the pathogenesis of COPD","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":620,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"National Heart, Lung, and Blood Institute; Weill Cornell Medical College; College of Veterinary Medicine, Cornell University; National Institutes of Health; Brigham and Women's Hospital","keywords":"Necroptosis; Mitophagy; PINK1; Mitochondrion; Autophagy; Programmed cell death; Cell biology; Pathogenesis; Parkin; Biology; Mitochondrial ROS; Immunology; Cancer research; Medicine; Pathology; Apoptosis; Biochemistry; Disease","score_opus":0.049808708557568145,"score_gpt":0.3692851976442535,"score_spread":0.31947648908668536,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109882045","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98412734,0.00059343287,0.0029753996,0.011385098,0.00059998163,0.00018341106,0.000004243883,0.0000070502933,0.0001240545],"genre_scores_gemma":[0.99053663,0.00016055781,0.0012798742,0.007088502,0.0008034457,0.0000033916135,0.0000026340977,0.00001065986,0.00011432129],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977638,0.00031085644,0.0013173787,0.00010478003,0.00039377695,0.00010940049],"domain_scores_gemma":[0.9972962,0.00083193945,0.0008108696,0.000243127,0.0005383811,0.00027944267],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023626548,0.00008975795,0.0005088953,0.00007733991,0.000044882676,0.000013495548,0.00015884185,0.00010955239,0.000044929293],"category_scores_gemma":[0.0036400524,0.000052805073,0.00030507406,0.00017509917,0.00014193698,0.00006464375,0.000022341723,0.00022295112,0.000020367494],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026581925,0.0009611747,0.7150268,0.00015306885,0.0012163592,0.000035768127,0.000490845,0.00039766048,0.13651389,0.004815462,0.0244873,0.11324351],"study_design_scores_gemma":[0.0026209112,0.0011476339,0.9091718,0.00024309712,0.00035663118,0.000018153332,0.000058372556,0.00030914892,0.07213631,0.0053338804,0.008534021,0.00006998591],"about_ca_topic_score_codex":0.0000065100176,"about_ca_topic_score_gemma":0.000001988292,"teacher_disagreement_score":0.19414508,"about_ca_system_score_codex":0.00001909277,"about_ca_system_score_gemma":0.00019710572,"threshold_uncertainty_score":0.43577456},"labels":[],"label_agreement":null},{"id":"W2109975654","doi":"10.1172/jci35381","title":"GSK-3β in mouse fibroblasts controls wound healing and fibrosis through an endothelin-1–dependent mechanism","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Wnt/β-catenin signaling in development and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":66,"is_retracted":true,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; Western University","funders":"Canadian Arthritis Network; Ontario Ministry of Research and Innovation; Schulich School of Medicine and Dentistry; Canadian Institutes of Health Research; Arthritis Society","keywords":"Wound healing; Fibrosis; Mechanism (biology); Endothelin 1; Fibroblast; Medicine; Endothelin receptor; Cell biology; Pathology; Chemistry; Biology; Internal medicine; Immunology; Biochemistry; In vitro; Receptor","score_opus":0.0614650940804485,"score_gpt":0.33584126419194255,"score_spread":0.27437617011149407,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109975654","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996834,0.00046420147,0.0018723261,0.0004006538,0.0002508792,0.000112833986,0.0000056531426,0.0000051146417,0.000054374977],"genre_scores_gemma":[0.9852325,0.0016196269,0.011286608,0.00088760146,0.00060567964,0.0000048108536,0.000015430009,0.00001749646,0.00033030252],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99806833,0.00021869481,0.001069681,0.00022916851,0.00024575437,0.00016836578],"domain_scores_gemma":[0.9988797,0.000096176445,0.0005602241,0.00013122204,0.00016945487,0.00016323049],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011532054,0.00013339268,0.000329277,0.000049054488,0.000072009665,0.000028006176,0.00014269403,0.00023386233,0.000015278034],"category_scores_gemma":[0.0004473976,0.00011666617,0.000098837234,0.000057085716,0.00015277193,0.000046350127,0.000040205625,0.00026286618,0.0000020553568],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004735893,0.00009973101,0.030408558,0.000020692833,0.00007612202,0.00001762644,0.00039510315,0.00048735834,0.96661466,0.00026393496,0.00042799098,0.0007146396],"study_design_scores_gemma":[0.004033345,0.0017026983,0.011016779,0.00014936103,0.000037996946,0.00015547946,0.00014841596,0.0004159854,0.97075814,0.008917572,0.0023236384,0.00034057332],"about_ca_topic_score_codex":0.000021592747,"about_ca_topic_score_gemma":0.00002559076,"teacher_disagreement_score":0.019391779,"about_ca_system_score_codex":0.000019895753,"about_ca_system_score_gemma":0.00024588648,"threshold_uncertainty_score":0.47575083},"labels":[],"label_agreement":null},{"id":"W2110045630","doi":"10.1172/jci68760","title":"Multicolor microRNA FISH effectively differentiates tumor types","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":89,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"National Center for Research Resources; National Institute of Neurological Disorders and Stroke; National Institute of General Medical Sciences; National Institute of Mental Health; Eidgenössische Technische Hochschule Zürich; National Cancer Institute; National Institutes of Health; Memorial Sloan-Kettering Cancer Center; Universität Basel; Howard Hughes Medical Institute","keywords":"microRNA; Biology; Computational biology; Genetics; Gene","score_opus":0.02867407159423965,"score_gpt":0.31889396109713997,"score_spread":0.29021988950290034,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2110045630","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981063,0.00015112173,0.0004890843,0.0006401621,0.00038146976,0.00018328543,0.000003530004,0.000005129113,0.0000399113],"genre_scores_gemma":[0.9958322,0.000030386493,0.0025381956,0.000774877,0.00070615514,0.0000049781547,0.000023430826,0.00001448196,0.00007526573],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99857426,0.00023829917,0.0007747783,0.00015117906,0.00014471752,0.00011678007],"domain_scores_gemma":[0.998412,0.00011952876,0.0007354674,0.00013713188,0.00040668822,0.00018917132],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048730627,0.000105967134,0.00022888996,0.00004313343,0.00003649414,0.00004161834,0.00014210911,0.00013149425,0.000060154318],"category_scores_gemma":[0.0016548763,0.0000851152,0.00020591146,0.00005588241,0.00013902492,0.000019796618,0.000040570292,0.00015744366,0.00003431344],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008997626,0.00010968509,0.10805313,0.000026063852,0.000121370475,0.0000020916116,0.000015714635,0.000046658828,0.87839603,0.00001652591,0.010911968,0.002210793],"study_design_scores_gemma":[0.0007949085,0.0003436292,0.72906125,0.00004729888,0.00005444808,0.000015022599,0.0000087731005,0.00032941432,0.267274,0.0008154091,0.0011593506,0.000096517644],"about_ca_topic_score_codex":0.000005938207,"about_ca_topic_score_gemma":0.0000037184814,"teacher_disagreement_score":0.6210081,"about_ca_system_score_codex":0.000013406983,"about_ca_system_score_gemma":0.0001086328,"threshold_uncertainty_score":0.3470897},"labels":[],"label_agreement":null},{"id":"W2110358511","doi":"10.1172/jci38399","title":"Kidney dendritic cell activation is required for progression of renal disease in a mouse model of glomerular injury","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immunotherapy and Immune Responses","field":"Immunology and Microbiology","cited_by":203,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; University of Toronto","funders":"Rheinische Friedrich-Wilhelms-Universität Bonn; Studienstiftung des Deutschen Volkes; Deutsche Forschungsgemeinschaft","keywords":"Kidney; Renal injury; Medicine; Kidney Glomerulus; Acute kidney injury; Disease; Pathology; Renal stem cell; Glomerulonephritis; Immunology; Biology; Cell biology; Internal medicine; Stem cell","score_opus":0.055665944322037,"score_gpt":0.36494283933955896,"score_spread":0.309276895017522,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2110358511","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99528325,0.0007424743,0.002377555,0.0011427675,0.00015560104,0.00025143923,0.00003320914,0.000004985429,0.000008744634],"genre_scores_gemma":[0.99656516,0.00028338292,0.0021832155,0.0006327529,0.000033909502,0.0000041475746,0.000025967194,0.000008955295,0.00026252848],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99757147,0.00032405608,0.0017466359,0.00012460322,0.000089087865,0.00014413468],"domain_scores_gemma":[0.9975731,0.00035881903,0.0015164133,0.00017054043,0.0003208875,0.000060277267],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013688029,0.00011098516,0.0004778018,0.00021083684,0.000038394464,0.0000049650207,0.00016305216,0.00024532957,0.000015764055],"category_scores_gemma":[0.002186996,0.00009155528,0.0002620618,0.0001314114,0.00023232802,0.0002987138,0.000012437047,0.00028987165,0.0000013349493],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008678439,0.00053288153,0.00216852,0.00006625624,0.000047764148,4.307352e-7,0.00031467286,0.0002144996,0.98136854,0.00015680949,0.00072674017,0.0057244743],"study_design_scores_gemma":[0.0034367116,0.0018795591,0.005054947,0.00059723394,0.00005899833,0.0000014060671,0.00002847132,0.001089935,0.9811676,0.006333518,0.0002578992,0.00009368329],"about_ca_topic_score_codex":0.0000034147588,"about_ca_topic_score_gemma":1.3172628e-7,"teacher_disagreement_score":0.0061767083,"about_ca_system_score_codex":0.000025202175,"about_ca_system_score_gemma":0.00055005937,"threshold_uncertainty_score":0.3733516},"labels":[],"label_agreement":null},{"id":"W2110871523","doi":"10.1172/jci37905","title":"CEACAM6 attenuates adenovirus infection by antagonizing viral trafficking in cancer cells","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Barts and The London School of Medicine and Dentistry; Queen Mary University of London; Cancer Research UK; McGill University","keywords":"Oncolytic adenovirus; Oncolytic virus; Cancer cell; Cancer research; Signal transduction; Adenovirus infection; Cancer; Biology; Cell biology; Cell signaling; Carcinogenesis; Cell; Immunology; Virus","score_opus":0.11058973321574131,"score_gpt":0.4406414992173857,"score_spread":0.33005176600164443,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2110871523","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98906195,0.00089720404,0.000044756518,0.009269824,0.00040616476,0.00011978546,0.0000035285468,0.000010383682,0.00018638154],"genre_scores_gemma":[0.9933658,0.0019177198,0.0005899644,0.0028556741,0.0010767835,0.0000011799559,0.000007899055,0.000007765414,0.00017721365],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99767506,0.00018500458,0.001289587,0.00015260313,0.0004773465,0.00022042474],"domain_scores_gemma":[0.9986204,0.0002911421,0.0005211403,0.000075085394,0.00021574071,0.00027648252],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014073306,0.00011827841,0.00047030053,0.00018048454,0.00005149876,0.000029686227,0.00007874456,0.0001657382,0.000048621103],"category_scores_gemma":[0.000498913,0.0000905947,0.00020066812,0.000248503,0.0001262952,0.00026919172,0.00001265931,0.00091832323,0.0000118184535],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00093477534,0.000458325,0.57954955,0.00006822221,0.0000709252,0.00011103537,0.00026826657,0.00027452188,0.25648153,0.0000921983,0.011360644,0.15033],"study_design_scores_gemma":[0.0028780622,0.0023812212,0.8761276,0.0008143188,0.000096008465,0.000100705714,0.000041133128,0.002721309,0.10133707,0.0013618842,0.011944159,0.00019651295],"about_ca_topic_score_codex":0.00021536351,"about_ca_topic_score_gemma":0.00002810642,"teacher_disagreement_score":0.29657808,"about_ca_system_score_codex":0.00008122667,"about_ca_system_score_gemma":0.0002538949,"threshold_uncertainty_score":0.39897084},"labels":[],"label_agreement":null},{"id":"W2111322263","doi":"10.1172/jci46387","title":"Plasma carboxypeptidase B downregulates inflammatory responses in autoimmune arthritis","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Blood Coagulation and Thrombosis Mechanisms","field":"Medicine","cited_by":78,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"National Center for Research Resources; National Center for Advancing Translational Sciences; National Institute of Arthritis and Musculoskeletal and Skin Diseases; Heart and Stroke Foundation of Canada; National Heart, Lung, and Blood Institute; National Institutes of Health; National Institute of Allergy and Infectious Diseases; U.S. Department of Veterans Affairs","keywords":"Proinflammatory cytokine; Immunology; Arthritis; Medicine; Inflammation; Thrombomodulin; Rheumatoid arthritis; Thrombin; Platelet","score_opus":0.11279735175894229,"score_gpt":0.34992224837424174,"score_spread":0.23712489661529945,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111322263","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975228,0.0001865639,0.000037065714,0.0008659094,0.00049407425,0.00014339955,8.936181e-7,0.000023139844,0.0007261924],"genre_scores_gemma":[0.9924099,0.00018386275,0.0064368704,0.00057520653,0.00023588631,0.0000026557484,0.0000028249322,0.00001552672,0.00013726357],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9971389,0.0003424444,0.0019076223,0.00013691542,0.00032973228,0.00014438732],"domain_scores_gemma":[0.9980974,0.00031834136,0.0008522451,0.00019235362,0.00027566025,0.00026399884],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024053967,0.00011805097,0.000569755,0.00027197404,0.00002990491,0.000013272055,0.00009164567,0.00021888423,0.00018115132],"category_scores_gemma":[0.002091898,0.00009934121,0.00020816263,0.00020754157,0.00018549526,0.00026167036,0.000023035293,0.00050703395,0.000028133265],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003255057,0.0009960291,0.85183555,0.00009637115,0.0002924451,0.0006231707,0.002631503,0.000032267428,0.07557156,0.010348208,0.0006882828,0.053629532],"study_design_scores_gemma":[0.0040465696,0.00091434567,0.9594216,0.00068437005,0.00006714438,0.00016004866,0.00013487638,0.00046866393,0.02463053,0.009054599,0.00031425088,0.00010304182],"about_ca_topic_score_codex":0.000013807186,"about_ca_topic_score_gemma":0.000022489421,"teacher_disagreement_score":0.10758599,"about_ca_system_score_codex":0.000030289708,"about_ca_system_score_gemma":0.0003800478,"threshold_uncertainty_score":0.4051017},"labels":[],"label_agreement":null},{"id":"W2112927505","doi":"10.1172/jci32011","title":"Parasympathetic response in chick myocytes and mouse heart is controlled by SREBP","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cardiac electrophysiology and arrhythmias","field":"Medicine","cited_by":170,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Heart, Lung, and Blood Institute; Center for Neuroscience Research; National Institutes of Health; National Institute of Neurological Disorders and Stroke; American Heart Association","keywords":"Internal medicine; Endocrinology; Sterol regulatory element-binding protein; Stimulation; Knockout mouse; Myocyte; Lipid metabolism; Biology; Cholesterol; Medicine; Receptor; Sterol","score_opus":0.040770399253413005,"score_gpt":0.35072733807042683,"score_spread":0.3099569388170138,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2112927505","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9870667,0.0008993565,0.0000107862625,0.011715092,0.00010660744,0.00016379124,0.0000016907359,0.0000069576504,0.000029042581],"genre_scores_gemma":[0.9928986,0.0008477252,0.0004428456,0.005184985,0.00028064576,0.0000028398888,0.0000019903364,0.000008846868,0.0003315434],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978582,0.00061307696,0.0010738621,0.0001314079,0.00019046161,0.00013296538],"domain_scores_gemma":[0.9978497,0.0012945915,0.00039930214,0.000111370246,0.00012298072,0.00022205559],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019091686,0.00009674214,0.0008157234,0.00010137772,0.000046914916,0.0000057216457,0.000031747113,0.00017587835,0.000016626087],"category_scores_gemma":[0.0035247514,0.0000712106,0.00024469176,0.00010718369,0.00035172372,0.000100748955,0.000009857611,0.000581994,0.000009167836],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.095854,0.0007304731,0.55669457,0.00005009296,0.0004355822,0.0009292752,0.0016085437,0.00010682213,0.2914297,0.00009471896,0.050695717,0.0013705043],"study_design_scores_gemma":[0.028624807,0.0058156126,0.9359522,0.0002124063,0.00018365559,0.003144538,0.00005313978,0.0009164641,0.020852761,0.0018597804,0.002198397,0.00018626417],"about_ca_topic_score_codex":0.0000038886083,"about_ca_topic_score_gemma":4.1814857e-7,"teacher_disagreement_score":0.3792576,"about_ca_system_score_codex":0.000022282158,"about_ca_system_score_gemma":0.00027073515,"threshold_uncertainty_score":0.4219711},"labels":[],"label_agreement":null},{"id":"W2113319733","doi":"10.1172/jci83111","title":"Blood kinetics of Ebola virus in survivors and nonsurvivors","year":2015,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":96,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"Ministero della Salute; Department for International Development; Government of the United Kingdom","keywords":"Viremia; Ebola virus; Medicine; Outbreak; Immunology; Internal medicine; Virology; Gastroenterology; Virus","score_opus":0.16122278624035272,"score_gpt":0.4345408877419932,"score_spread":0.2733181015016405,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2113319733","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976195,0.00022343446,0.00012391599,0.001020174,0.00024286863,0.00009122089,0.0000016342773,0.0000034086156,0.00067381654],"genre_scores_gemma":[0.99747235,0.00028613047,0.001764334,0.00015017751,0.00023060801,6.782808e-7,0.0000015473698,0.000007731035,0.00008644843],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980041,0.00024460317,0.0011990555,0.000085578016,0.00036467126,0.00010200104],"domain_scores_gemma":[0.99820465,0.00036570473,0.00043707332,0.000093480834,0.0005316688,0.00036740818],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026307679,0.00006672228,0.00041923986,0.00022109973,0.000009379269,0.000010729208,0.00004872921,0.00013270497,0.000011445336],"category_scores_gemma":[0.0035552434,0.000050427443,0.000090184294,0.00028517202,0.00025395153,0.00011714068,0.00002765889,0.0004524159,0.0000027035258],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004386067,0.00072581146,0.9320766,0.00008116765,0.00009143533,0.000063409076,0.0003098935,0.00007502805,0.0564023,0.00027244954,0.0004604129,0.00900291],"study_design_scores_gemma":[0.0063502206,0.005241386,0.9079432,0.00039718553,0.00019036816,0.00025474792,0.00027392208,0.0011676216,0.072974004,0.0036604765,0.0014314164,0.000115435294],"about_ca_topic_score_codex":0.00037880693,"about_ca_topic_score_gemma":0.00032527462,"teacher_disagreement_score":0.024133362,"about_ca_system_score_codex":0.000016744312,"about_ca_system_score_gemma":0.00020904068,"threshold_uncertainty_score":0.4256215},"labels":[],"label_agreement":null},{"id":"W2113484361","doi":"10.1172/jci26020","title":"A molecular chaperone for mitochondrial complex I assembly is mutated in a progressive encephalopathy","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":282,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Neurological Institute and Hospital; McGill University","funders":"Canadian Institutes of Health Research; March of Dimes Foundation; Howard Hughes Medical Institute","keywords":"Chaperone (clinical); Protein subunit; Biology; Mitochondrion; Mitochondrial matrix; Enzyme; Genetics; Cell biology; Biochemistry; Medicine; Gene; Pathology","score_opus":0.06430496510117388,"score_gpt":0.3770847807447986,"score_spread":0.3127798156436247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2113484361","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98604083,0.00024255597,0.009652842,0.0027928473,0.0008225482,0.00033445918,0.0000092679165,0.000004502222,0.00010012619],"genre_scores_gemma":[0.95243037,0.00006365473,0.03964607,0.004813779,0.0028257992,0.000026380489,0.00007184085,0.000020355767,0.00010176576],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99797094,0.00025780505,0.00116739,0.00025472723,0.00017369862,0.00017543689],"domain_scores_gemma":[0.99849105,0.000090417096,0.0007272149,0.00016172882,0.0003611427,0.00016844585],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00075054856,0.00012489551,0.00033917328,0.000086803484,0.000033023123,0.000020699452,0.00015455444,0.00028066657,0.000037585276],"category_scores_gemma":[0.0017481345,0.00011040219,0.00023783575,0.00011249065,0.0001373744,0.00001582418,0.000026820982,0.00022017692,0.0000071561744],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012233885,0.00017914713,0.002643774,0.000012301532,0.00005003336,0.000018321667,0.0001654647,0.0002884525,0.9816529,0.00015312835,0.0066976193,0.0069154724],"study_design_scores_gemma":[0.021183789,0.0112582045,0.018775107,0.0002257028,0.00019806773,0.00042537128,0.00021590099,0.009194285,0.7609342,0.0035415299,0.17326634,0.0007815589],"about_ca_topic_score_codex":0.0000017250954,"about_ca_topic_score_gemma":0.000011287756,"teacher_disagreement_score":0.22071874,"about_ca_system_score_codex":0.000014814773,"about_ca_system_score_gemma":0.00022773184,"threshold_uncertainty_score":0.45020705},"labels":[],"label_agreement":null},{"id":"W2113606609","doi":"10.1172/jci7739","title":"IL-4 gene therapy for collagen arthritis suppresses synovial IL-17 and osteoprotegerin ligand and prevents bone erosion","year":2000,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Bone Metabolism and Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":307,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"European Commission; Hamilton Health Sciences","keywords":"Osteoprotegerin; Osteoclast; RANKL; Bone resorption; Cathepsin K; Arthritis; Inflammation; Tartrate-resistant acid phosphatase; Osteolysis; Internal medicine; Rheumatoid arthritis; Medicine; Endocrinology; Chemistry; Immunology; Receptor; Surgery","score_opus":0.030029463814174137,"score_gpt":0.3192652753956278,"score_spread":0.2892358115814537,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2113606609","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99019855,0.008815145,0.00010805365,0.00038335935,0.00014353398,0.00026428932,0.000067429144,0.0000030495896,0.000016591825],"genre_scores_gemma":[0.9731245,0.022839231,0.0023280072,0.0005682428,0.0008620885,0.0000109809835,0.000039805545,0.000013033019,0.00021407718],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988182,0.00011165438,0.00064582494,0.00018509224,0.00012753738,0.00011168895],"domain_scores_gemma":[0.99918985,0.00007264162,0.00029632184,0.00010795947,0.000112090216,0.00022116258],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00057272817,0.00010810388,0.00028447455,0.000025165471,0.00007276568,0.000047976384,0.00006111653,0.00015745485,0.000015126084],"category_scores_gemma":[0.0003951969,0.00008913767,0.00010358081,0.000035768502,0.00017294995,0.000021834949,0.000022308857,0.00006194282,6.1791087e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021549922,0.00020431462,0.011241319,0.00003987653,0.000081969956,0.000007372565,0.000058522186,0.000021650225,0.8450119,0.000015190555,0.007064968,0.13409792],"study_design_scores_gemma":[0.008776078,0.0032799717,0.15121809,0.00016354426,0.000113356095,0.00012189695,0.00003058282,0.00006496054,0.7690043,0.0038534168,0.06306589,0.00030795336],"about_ca_topic_score_codex":0.0000047333515,"about_ca_topic_score_gemma":0.000005201379,"teacher_disagreement_score":0.13997675,"about_ca_system_score_codex":0.0000017899812,"about_ca_system_score_gemma":0.00010384702,"threshold_uncertainty_score":0.36349288},"labels":[],"label_agreement":null},{"id":"W2113929252","doi":"10.1172/jci15336","title":"A translational rheostat for RFLAT-1 regulates RANTES expression in T lymphocytes","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institutes of Health; Elizabeth Glaser Pediatric AIDS Foundation","keywords":"Cell biology; Chemokine; Transcription factor; Biology; T cell; Proinflammatory cytokine; EIF4E; p38 mitogen-activated protein kinases; Effector; MAPK/ERK pathway; Kinase; Inflammation; Translation (biology); Immunology; Immune system; Gene; Messenger RNA; Genetics","score_opus":0.07463683282965859,"score_gpt":0.33247707445285823,"score_spread":0.25784024162319963,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2113929252","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9873446,0.002953643,0.002556007,0.0023669237,0.0042814137,0.00020272232,0.0000027474223,0.000016696347,0.000275239],"genre_scores_gemma":[0.994531,0.00037123714,0.001936133,0.00043830395,0.00019262066,0.0000061069936,0.000034445853,0.000010953813,0.0024792436],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980433,0.0002840506,0.0013610837,0.00012555555,0.000055292316,0.00013071712],"domain_scores_gemma":[0.9977774,0.0012105007,0.0006828956,0.00008164064,0.00021727163,0.000030269786],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010382289,0.00009734277,0.00031943968,0.00016554815,0.00007031773,0.000015496573,0.00009249054,0.00023846672,0.0007497999],"category_scores_gemma":[0.0013002455,0.000077701305,0.00023081717,0.000100986945,0.00013575166,0.0003878272,0.0000071583986,0.00031037614,0.00006092022],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025803281,0.00052514765,0.038392182,0.000050811137,0.00015615804,0.00000389967,0.0013180822,0.00041885735,0.8391668,0.0007202418,0.08071743,0.035950027],"study_design_scores_gemma":[0.02351845,0.0022087859,0.11111643,0.0010450846,0.00014252563,0.00027721433,0.0005508168,0.0067351484,0.62577,0.011315062,0.21684408,0.0004764039],"about_ca_topic_score_codex":0.0000033027125,"about_ca_topic_score_gemma":0.000002584227,"teacher_disagreement_score":0.21339685,"about_ca_system_score_codex":0.000026646716,"about_ca_system_score_gemma":0.00004924227,"threshold_uncertainty_score":0.8209783},"labels":[],"label_agreement":null},{"id":"W2114076955","doi":"10.1172/jci39828","title":"Antiphospholipid antibodies promote leukocyte–endothelial cell adhesion and thrombosis in mice by antagonizing eNOS via β2GPI and apoER2","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Systemic Lupus Erythematosus Research","field":"Medicine","cited_by":194,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hypertension Canada","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institutes of Health; National Heart, Lung, and Blood Institute; Lupus Research Alliance","keywords":"Enos; Immunology; Antibody; VCAM-1; Endothelial stem cell; Thrombosis; Medicine; Cell adhesion molecule; Biology; Internal medicine; ICAM-1; In vitro; Nitric oxide; Nitric oxide synthase; Biochemistry","score_opus":0.056231521937453156,"score_gpt":0.3738694221775349,"score_spread":0.3176379002400817,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2114076955","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996569,0.0007443791,0.00004885534,0.0015394171,0.00058169157,0.00036132554,0.0000044011704,0.000012912627,0.00013801055],"genre_scores_gemma":[0.9924622,0.001878644,0.0046793134,0.00026335378,0.0005782316,0.0000022643396,0.000004864794,0.000027658416,0.00010345523],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997026,0.0002517254,0.0016153442,0.00028458564,0.00056354754,0.00025874394],"domain_scores_gemma":[0.99750865,0.00079754833,0.000813101,0.0001660142,0.00029432826,0.000420369],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0032941548,0.00017814567,0.0007951984,0.00020114727,0.000073301664,0.000057475692,0.00011889786,0.0003112788,0.000017539518],"category_scores_gemma":[0.0022934908,0.0001358988,0.000108964945,0.00018557723,0.00045392395,0.0003439034,0.00007219987,0.0012019232,0.000007399917],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016003386,0.00009242592,0.4506499,0.00023863341,0.000021674483,0.000018842955,0.00047398312,1.4335168e-7,0.54588723,0.000008779939,0.00057720375,0.0018711681],"study_design_scores_gemma":[0.009335949,0.0015498862,0.18900704,0.0019152069,0.00017490493,0.0035817374,0.00057818915,0.0019478905,0.78916556,0.0011355984,0.0013038564,0.00030419463],"about_ca_topic_score_codex":0.00006608892,"about_ca_topic_score_gemma":0.000017435803,"teacher_disagreement_score":0.26164284,"about_ca_system_score_codex":0.00003608752,"about_ca_system_score_gemma":0.00023394183,"threshold_uncertainty_score":0.5541792},"labels":[],"label_agreement":null},{"id":"W2114170344","doi":"10.1172/jci13946","title":"Insulin signaling coordinately regulates cardiac size, metabolism, and contractile protein isoform expression","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Metabolism, Diabetes, and Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":377,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; National Institutes of Health; American Diabetes Association","keywords":"Gene isoform; Insulin; Cell biology; Insulin receptor; Metabolism; Signal transduction; Biology; Protein expression; Endocrinology; Internal medicine; Chemistry; Biochemistry; Gene; Medicine; Insulin resistance","score_opus":0.03754071205424967,"score_gpt":0.30479571429140195,"score_spread":0.26725500223715226,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2114170344","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8967415,0.10226475,0.000092335344,0.00015784368,0.0004656986,0.00015284031,0.000007147832,0.00000538599,0.000112475595],"genre_scores_gemma":[0.9752591,0.02020857,0.0021658489,0.0004889706,0.0016347594,0.000008564974,0.0000060404795,0.00001936862,0.00020873212],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980953,0.00025025773,0.0010170048,0.0002144402,0.00024528816,0.00017775719],"domain_scores_gemma":[0.998207,0.00017601384,0.00087849057,0.00016763301,0.0003202799,0.0002505979],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013780727,0.00014762819,0.00047494605,0.000039794806,0.000073037845,0.000049257575,0.00012711644,0.0002639529,0.000066632885],"category_scores_gemma":[0.002775766,0.00011752436,0.00020408402,0.00008134614,0.00017889698,0.00004023287,0.00004071971,0.00029470926,0.0000037487202],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002451877,0.000114447554,0.003214918,0.00004623613,0.0001560499,0.0000035695068,0.000112303605,0.00006894619,0.87593776,0.00008800961,0.0068347123,0.113177866],"study_design_scores_gemma":[0.0015011213,0.00034311082,0.012408769,0.0001684889,0.00011833021,0.000007755259,0.000069315276,0.00018290657,0.8202782,0.0015246741,0.1631771,0.0002202149],"about_ca_topic_score_codex":0.0000041724943,"about_ca_topic_score_gemma":9.332763e-7,"teacher_disagreement_score":0.15634239,"about_ca_system_score_codex":0.000006728891,"about_ca_system_score_gemma":0.000070889444,"threshold_uncertainty_score":0.47925043},"labels":[],"label_agreement":null},{"id":"W2114923316","doi":"10.1172/jci66108","title":"Chronic viral infection promotes sustained Th1-derived immunoregulatory IL-10 via BLIMP-1","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":92,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"National Institute of Allergy and Infectious Diseases; National Health and Medical Research Council; Yale University; National Institutes of Health; Canadian Institutes of Health Research; Alexander von Humboldt-Stiftung; Howard Hughes Medical Institute","keywords":"Lymphocytic choriomeningitis; Biology; Immune system; Chronic infection; T cell; Immunology; Virus; Cytokine; Virology; CD8","score_opus":0.02556665882068959,"score_gpt":0.3044554397596309,"score_spread":0.2788887809389413,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2114923316","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9853829,0.0004293347,0.004188548,0.0010177279,0.008127741,0.000167015,5.8488484e-7,0.000054988224,0.0006311419],"genre_scores_gemma":[0.99451447,0.00008676202,0.00012659344,0.00037971337,0.0009699383,0.0000041315852,0.000053250853,0.00002022922,0.0038448977],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968382,0.0009972198,0.0016413367,0.00019526883,0.000094808274,0.00023316804],"domain_scores_gemma":[0.9971312,0.00044448127,0.0015422294,0.00023031772,0.00058848265,0.000063234496],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0022915462,0.00018213896,0.00047900112,0.000211003,0.0001838201,0.000038107595,0.00015046875,0.00044438316,0.001050163],"category_scores_gemma":[0.0019907567,0.00015047641,0.00035998202,0.00014553693,0.0003565218,0.0005998126,0.000040262647,0.0008984461,0.0004500327],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00061934016,0.00017167824,0.0071544233,0.000038984468,0.000290181,0.000001496294,0.00014489594,0.00006676307,0.93950844,0.0005309305,0.013317481,0.038155373],"study_design_scores_gemma":[0.0072105518,0.007332916,0.20334207,0.00025576426,0.00031164123,0.0002944039,0.00010658472,0.0012102401,0.5308517,0.0049296007,0.24367656,0.0004779332],"about_ca_topic_score_codex":0.000032185573,"about_ca_topic_score_gemma":0.000008211529,"teacher_disagreement_score":0.40865672,"about_ca_system_score_codex":0.00013608919,"about_ca_system_score_gemma":0.00024911403,"threshold_uncertainty_score":0.999863},"labels":[],"label_agreement":null},{"id":"W2114942701","doi":"10.1172/jci17892","title":"Human phospholamban null results in lethal dilated cardiomyopathy revealing a critical difference between mouse and human","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cardiac electrophysiology and arrhythmias","field":"Medicine","cited_by":458,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; National Institutes of Health; National Heart, Lung, and Blood Institute; University of Cincinnati; Heart and Stroke Foundation of Canada","keywords":"Phospholamban; Dilated cardiomyopathy; Heart failure; Internal medicine; Cardiomyopathy; Biology; Endocrinology; Null allele; Transplantation; Gene targeting; Cardiac function curve; Endoplasmic reticulum; Phenotype; Cell biology; Medicine; Gene; Genetics","score_opus":0.07356511232142594,"score_gpt":0.39147512189506334,"score_spread":0.3179100095736374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2114942701","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99804944,0.00016413155,0.00003339898,0.0011611755,0.00014517437,0.00012403322,0.0000045597167,0.000012680611,0.00030539013],"genre_scores_gemma":[0.9981992,0.00003160818,0.00067566265,0.00030579558,0.0006461644,0.000001749452,0.000011664951,0.000014575101,0.000113557064],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99686986,0.00070165866,0.0016923698,0.00024727307,0.0002615847,0.00022722935],"domain_scores_gemma":[0.9980496,0.0007428218,0.00046024215,0.00018212564,0.00022609247,0.0003390952],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0027669487,0.00014653476,0.0008679999,0.0001344658,0.00010630539,0.000021487316,0.00005765132,0.00029462398,0.0000054560633],"category_scores_gemma":[0.0062755416,0.0001225298,0.00022764418,0.00018200417,0.0004254098,0.000122010126,0.000020018586,0.0012754217,0.0000022716883],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00077997695,0.00028025848,0.82893306,0.00014168808,0.00023945638,0.0012643968,0.0005841786,0.000040529914,0.15966676,0.00549056,0.00069566804,0.0018834627],"study_design_scores_gemma":[0.003814593,0.0016075774,0.9737357,0.0004070971,0.00020893443,0.00031652336,0.000038611222,0.000019298408,0.011218148,0.008363949,0.00011719784,0.00015237735],"about_ca_topic_score_codex":0.00002282896,"about_ca_topic_score_gemma":0.000004056874,"teacher_disagreement_score":0.14844862,"about_ca_system_score_codex":0.00004339666,"about_ca_system_score_gemma":0.00014819636,"threshold_uncertainty_score":0.75128627},"labels":[],"label_agreement":null},{"id":"W2115028037","doi":"10.1172/jci21739","title":"Src promotes estrogen-dependent estrogen receptor α proteolysis in human breast cancer","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Estrogen and related hormone effects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":86,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"University of Toronto; Sylvester Comprehensive Cancer Center, University of Miami Health Systems; University of Miami; U.S. Department of Defense","keywords":"Estrogen receptor alpha; Estrogen receptor; Proto-oncogene tyrosine-protein kinase Src; Estrogen; Cancer research; Estrogen receptor beta; Biology; Alpha (finance); Proteolysis; Endocrinology; Internal medicine; Chemistry; Cell biology; Signal transduction; Breast cancer; Cancer; Medicine; Biochemistry","score_opus":0.02601182302584698,"score_gpt":0.35904510422416996,"score_spread":0.333033281198323,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2115028037","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99768305,0.00084037776,0.00016477225,0.0006716523,0.00031017826,0.00024730113,0.0000063764164,0.0000061864766,0.000070109105],"genre_scores_gemma":[0.996587,0.0002083962,0.0017516161,0.00017935158,0.0011175523,0.0000075068847,0.00002215531,0.000022549133,0.00010389007],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99763834,0.00023218952,0.001336927,0.00023872362,0.0003015982,0.000252225],"domain_scores_gemma":[0.9983725,0.0000562451,0.0008530335,0.00017765879,0.00024786842,0.00029271338],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026784025,0.00015925024,0.0003396953,0.00011048098,0.000057850382,0.000024406669,0.00020672112,0.00040777028,0.000024805628],"category_scores_gemma":[0.00039644638,0.00012902099,0.00025892904,0.00017650105,0.00016270661,0.000018817753,0.00004753997,0.0005361247,0.0000062523563],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002981,0.00019194112,0.3134711,0.000017013846,0.0001540241,0.000024246347,0.000037195005,0.00009061237,0.67711955,0.00008116867,0.00032323826,0.008191817],"study_design_scores_gemma":[0.0025111798,0.0013461364,0.11566498,0.00022500374,0.0001224319,0.00018047559,0.000059258666,0.00006003546,0.87816465,0.00055483443,0.00082274666,0.00028827152],"about_ca_topic_score_codex":0.000041767595,"about_ca_topic_score_gemma":0.00002404726,"teacher_disagreement_score":0.20104511,"about_ca_system_score_codex":0.000041317537,"about_ca_system_score_gemma":0.00026674045,"threshold_uncertainty_score":0.52613235},"labels":[],"label_agreement":null},{"id":"W2115883095","doi":"10.1172/jci32865","title":"Curcumin prevents and reverses murine cardiac hypertrophy","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Curcumin's Biomedical Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":129,"is_retracted":true,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Western University; St. Boniface Hospital; Canadian Institutes of Health Research; Heart and Stroke Foundation; Toronto General Hospital; University of Toronto; University Health Network","funders":"Institute of Circulatory and Respiratory Health; Canadian Institutes of Health Research; University of Toronto; University of Manitoba; Heart and Stroke Foundation of Canada","keywords":"Curcumin; Cardiac fibrosis; Muscle hypertrophy; Fibrosis; Acetylation; Histone; P300-CBP Transcription Factors; Chromatin remodeling; Biology; Endocrinology; Cancer research; Internal medicine; Chemistry; Pharmacology; Medicine; Histone Acetyltransferases; Biochemistry; Gene","score_opus":0.053037861889708666,"score_gpt":0.3459457015914629,"score_spread":0.2929078397017542,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2115883095","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99713755,0.00050121563,0.00067483797,0.0012030182,0.0002605158,0.000093301765,0.00000666673,0.0000034990442,0.00011941426],"genre_scores_gemma":[0.9911128,0.0011339003,0.0055700433,0.0005596383,0.0011689032,0.0000040382674,0.00002508453,0.000010403027,0.00041514583],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987056,0.000121939825,0.0007218831,0.00015742896,0.00019845077,0.00009465042],"domain_scores_gemma":[0.99893326,0.000079719764,0.0004232926,0.00016207747,0.00015151493,0.000250149],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00055657135,0.00008381417,0.00023707196,0.00003549921,0.000058260244,0.0000071451473,0.00011392131,0.00015026343,0.000009460035],"category_scores_gemma":[0.0010716398,0.00006939577,0.00014539357,0.00008850415,0.00040541537,0.000010040496,0.00005581985,0.00017431838,0.0000057082234],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019764378,0.00032602076,0.31429178,0.000046393205,0.00025646613,0.00002112972,0.000103986065,0.000009871139,0.60078704,0.00021697911,0.06603938,0.017703285],"study_design_scores_gemma":[0.0021664829,0.0014734033,0.4612164,0.00007635966,0.00013947296,0.0003079264,0.000048943,0.00006588856,0.101275995,0.002666462,0.43023726,0.00032541907],"about_ca_topic_score_codex":0.0000045264856,"about_ca_topic_score_gemma":5.4376216e-7,"teacher_disagreement_score":0.49951106,"about_ca_system_score_codex":0.0000063251755,"about_ca_system_score_gemma":0.00014118396,"threshold_uncertainty_score":0.28298774},"labels":[],"label_agreement":null},{"id":"W2115985004","doi":"10.1172/jci17038","title":"Randall’s plaque of patients with nephrolithiasis begins in basement membranes of thin loops of Henle","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Kidney Stones and Urolithiasis Treatments","field":"Medicine","cited_by":612,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institutes of Health","keywords":"Basement membrane; Medicine; Kidney stones; Calcium; Anatomy; Pathology; Urology; Internal medicine","score_opus":0.03936582350563315,"score_gpt":0.33095617237809266,"score_spread":0.2915903488724595,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2115985004","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99843246,0.0001444469,0.00007693223,0.00069137866,0.00015502432,0.0002743855,0.00001559072,0.0000022714664,0.00020751284],"genre_scores_gemma":[0.992938,0.00015696796,0.0064131543,0.0003814108,0.000047808637,0.0000021088008,0.000012440332,0.000012744959,0.000035399422],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99665284,0.00028710766,0.0021835242,0.00012917248,0.00062253646,0.00012481913],"domain_scores_gemma":[0.99651814,0.00038089094,0.0019611896,0.0001964467,0.00071073935,0.00023257104],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014425478,0.00013307872,0.0009380262,0.00019571184,0.000013540457,0.0000029087587,0.00007900438,0.00013684701,0.00004927],"category_scores_gemma":[0.0020347398,0.00008796149,0.00021856623,0.0002622555,0.0002336712,0.00014873185,0.000010802266,0.00025931827,6.0913925e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001779113,0.0014885372,0.994329,0.00025816282,0.0002550272,0.0000069048506,0.00045759088,0.00012687744,0.000230751,0.00026326478,0.000116897274,0.00068791123],"study_design_scores_gemma":[0.014847982,0.0025321862,0.9646273,0.0007408466,0.00038480802,0.000007834917,0.00017211455,0.00007761683,0.015341313,0.0006962422,0.00049898564,0.00007272301],"about_ca_topic_score_codex":0.000075830874,"about_ca_topic_score_gemma":0.000012293468,"teacher_disagreement_score":0.029701615,"about_ca_system_score_codex":0.000036638623,"about_ca_system_score_gemma":0.00051482685,"threshold_uncertainty_score":0.35869655},"labels":[],"label_agreement":null},{"id":"W2117011155","doi":"10.1172/jci29383","title":"Secreted PCSK9 decreases the number of LDL receptors in hepatocytes and inlivers of parabiotic mice","year":2006,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Lipoproteins and Cardiovascular Health","field":"Medicine","cited_by":671,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Heart, Lung, and Blood Institute; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; University of Texas Southwestern Medical Center","keywords":"PCSK9; Kexin; LDL receptor; Proprotein convertase; Endocytosis; Biology; Receptor; Cell biology; Endocytic cycle; Internal medicine; Endocrinology; Molecular biology; Cholesterol; Lipoprotein; Biochemistry","score_opus":0.04176156610301236,"score_gpt":0.34578452085656836,"score_spread":0.304022954753556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2117011155","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99746245,0.0007184354,0.000038714275,0.0013664099,0.00010755903,0.00017301121,0.0000011724297,0.0000024589638,0.00012978016],"genre_scores_gemma":[0.9974335,0.000401345,0.0016295088,0.0002432788,0.00026314845,9.10934e-7,0.000003324459,0.0000065400964,0.000018474944],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99794567,0.00034780242,0.0011684092,0.000085820524,0.00036617808,0.00008614802],"domain_scores_gemma":[0.9981226,0.0005257188,0.0008303314,0.00013413126,0.00026548497,0.00012177905],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024631484,0.00007126543,0.00052603305,0.000058786485,0.000018045968,0.000005037036,0.000057592988,0.000113249196,0.00001956654],"category_scores_gemma":[0.001485622,0.000044767025,0.00022760376,0.00018803221,0.00031014692,0.00009312202,0.0000139062595,0.00028372984,9.801355e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002601145,0.000104211314,0.99224275,0.00015182172,0.000095468415,0.000010724641,0.00010416839,0.000034117056,0.00080346974,0.00022406016,0.00042105548,0.005548032],"study_design_scores_gemma":[0.0025228155,0.00039342398,0.98559624,0.00061456655,0.00024651305,0.00012080179,0.00023775971,0.00037956677,0.0073220264,0.0017993101,0.0007081747,0.00005879043],"about_ca_topic_score_codex":0.000860102,"about_ca_topic_score_gemma":0.000054698397,"teacher_disagreement_score":0.0066465056,"about_ca_system_score_codex":0.000023125625,"about_ca_system_score_gemma":0.00027998912,"threshold_uncertainty_score":0.18255462},"labels":[],"label_agreement":null},{"id":"W2117073110","doi":"10.1172/jci9654","title":"A double mutation in families with periodic paralysis defines new aspects of sodium channel slow inactivation","year":2000,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Ion channel regulation and function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia; Western University","funders":"National Center for Research Resources; University of Utah; National Cancer Institute; Paralyzed Veterans of America; Muscular Dystrophy Association","keywords":"Mutation; Sodium channel; Periodic paralysis; Mutant; Genetics; Biology; Isoleucine; Leucine; Skeletal muscle; Point mutation; Gene; Paralysis; Chemistry; Endocrinology; Medicine; Sodium; Amino acid","score_opus":0.0441018843422295,"score_gpt":0.31176760768714684,"score_spread":0.26766572334491734,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2117073110","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965064,0.00008055522,0.0017372407,0.00084316125,0.00018710612,0.00009825901,7.9116626e-7,0.0000035635758,0.0005429257],"genre_scores_gemma":[0.9976996,0.00017941592,0.00093663024,0.00018613189,0.0005640224,0.0000025706233,0.000046868987,0.000009040615,0.00037568045],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986152,0.000099887846,0.00083546387,0.00014007556,0.00022166764,0.0000876874],"domain_scores_gemma":[0.9988885,0.000042960695,0.00062051084,0.00010112685,0.00025677006,0.00009015692],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005429135,0.00009458658,0.00024805195,0.00013597723,0.00003013347,0.000016551745,0.00006519459,0.00015576644,0.00003288051],"category_scores_gemma":[0.00026175726,0.0000759818,0.00010718819,0.00026363687,0.00009785893,0.000039087252,0.0000063572525,0.0001284658,0.0000029235862],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.026654147,0.0018237544,0.3150554,0.0003427764,0.000954368,0.0000402278,0.0061426186,0.18429612,0.23239194,0.0030711405,0.008830108,0.22039741],"study_design_scores_gemma":[0.020336377,0.0065617957,0.51536876,0.0005051841,0.0002601051,0.00015913886,0.0016577729,0.017680218,0.41833594,0.011161957,0.007306934,0.0006657796],"about_ca_topic_score_codex":0.00006112422,"about_ca_topic_score_gemma":0.000060333467,"teacher_disagreement_score":0.21973163,"about_ca_system_score_codex":0.000016294189,"about_ca_system_score_gemma":0.00026907522,"threshold_uncertainty_score":0.3098448},"labels":[],"label_agreement":null},{"id":"W2117198005","doi":"10.1172/jci24225","title":"The AML1-ETO fusion gene and the FLT3 length mutation collaborate in inducing acute leukemia in mice","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Acute Myeloid Leukemia Research","field":"Medicine","cited_by":240,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"","keywords":"Leukemia; Biology; Neuroblastoma RAS viral oncogene homolog; Haematopoiesis; Cancer research; Gene; Signal transduction; Mutation; Genetics; Stem cell","score_opus":0.05203177064518576,"score_gpt":0.38833981176546956,"score_spread":0.3363080411202838,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2117198005","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96177804,0.0005793083,0.000048987502,0.03684889,0.00017673409,0.00040205056,0.0000011880694,0.000005691958,0.00015907588],"genre_scores_gemma":[0.9910045,0.0029708708,0.0031321356,0.0019360785,0.0007655676,0.000008433591,0.0000051720795,0.000015784797,0.00016144385],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99639,0.0009015606,0.0017625006,0.00017892453,0.0005387821,0.0002282726],"domain_scores_gemma":[0.995803,0.0025682077,0.0008105807,0.0001813772,0.00043613938,0.00020070627],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.009797522,0.00012163738,0.00046239985,0.00019317014,0.0001202145,0.00007094202,0.00017821857,0.00020634345,0.0000051922466],"category_scores_gemma":[0.0063041924,0.00006648542,0.000085700754,0.0006684844,0.0005079769,0.0003547809,0.00006494019,0.0014826813,0.00000857591],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.026794877,0.0004022085,0.33056435,0.00018797156,0.0008185612,0.0011584817,0.015461488,0.010265013,0.12678272,0.0037452993,0.012406177,0.47141287],"study_design_scores_gemma":[0.036410876,0.0010187753,0.81345385,0.00081266765,0.00029706763,0.0006959003,0.001663284,0.11502495,0.01954426,0.007469699,0.00334314,0.00026555354],"about_ca_topic_score_codex":0.00011022276,"about_ca_topic_score_gemma":0.0003659152,"teacher_disagreement_score":0.4828895,"about_ca_system_score_codex":0.00069606386,"about_ca_system_score_gemma":0.0017899906,"threshold_uncertainty_score":0.7547162},"labels":[],"label_agreement":null},{"id":"W2117281169","doi":"10.1172/jci66776","title":"Macrophages eliminate circulating tumor cells after monoclonal antibody therapy","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":270,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Antibody opsonization; Monoclonal antibody; Macrophage; Antibody; Cancer research; Phagocytosis; Biology; Fc receptor; Cancer cell; Immunology; Cancer; In vitro; Opsonin; Biochemistry","score_opus":0.07656958440721645,"score_gpt":0.4197651832695201,"score_spread":0.34319559886230366,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2117281169","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937208,0.0005012167,0.0003070005,0.004060621,0.0005494,0.00015164143,0.000004570301,0.000013449671,0.00069125794],"genre_scores_gemma":[0.9864907,0.00045804752,0.0068394365,0.0034914017,0.0022194134,0.0000028259126,0.0000110551255,0.00002399627,0.0004631092],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99677545,0.00040255525,0.0015623496,0.00021325122,0.00076958875,0.00027680834],"domain_scores_gemma":[0.9971402,0.00084544695,0.0007602348,0.00018559872,0.00055274204,0.0005157565],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0027575716,0.0001752135,0.00065443857,0.00015052287,0.00007664242,0.00004773228,0.00015610245,0.00012893903,0.00023621797],"category_scores_gemma":[0.0010698802,0.00012049248,0.00044989283,0.00017955838,0.00032736952,0.0001948528,0.00004258837,0.00080552633,0.00007065452],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0038563476,0.0005330941,0.6416265,0.00025005132,0.0003555733,0.00076138636,0.00031964178,0.0000910129,0.26387143,0.0005357193,0.0023963917,0.0854029],"study_design_scores_gemma":[0.002546979,0.002086002,0.9396445,0.00038836064,0.000078865625,0.00040096376,0.0000291063,0.004546256,0.036221076,0.0032187025,0.01065585,0.00018331021],"about_ca_topic_score_codex":0.000019817693,"about_ca_topic_score_gemma":9.329169e-7,"teacher_disagreement_score":0.29801807,"about_ca_system_score_codex":0.000023183597,"about_ca_system_score_gemma":0.00022736726,"threshold_uncertainty_score":0.49135405},"labels":[],"label_agreement":null},{"id":"W2117810566","doi":"10.1172/jci39738","title":"Cardiac macrophage migration inhibitory factor inhibits JNK pathway activation and injury during ischemia/reperfusion","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Macrophage Migration Inhibitory Factor","field":"Immunology and Microbiology","cited_by":174,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Heart, Lung, and Blood Institute; National Institutes of Health; U.S. Public Health Service; Canadian Diabetes Association; Brookdale Foundation; Studienstiftung des Deutschen Volkes; American Heart Association","keywords":"Macrophage migration inhibitory factor; Reperfusion injury; Ischemia; Proinflammatory cytokine; Kinase; MAPK/ERK pathway; Endocrinology; Internal medicine; Medicine; Pharmacology; Cytokine; Biology; Inflammation; Cell biology","score_opus":0.02630644483635825,"score_gpt":0.30163225884544165,"score_spread":0.2753258140090834,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2117810566","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99620295,0.0006129789,0.00014780641,0.0010716921,0.0015780776,0.00025433986,0.00002182839,0.000047078254,0.00006324954],"genre_scores_gemma":[0.99761176,0.00021000182,0.00038142418,0.00042780247,0.00080474344,0.000003359599,0.000045159017,0.000018551968,0.00049717445],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99665785,0.0006778728,0.0019036381,0.00032977507,0.0001871236,0.00024377122],"domain_scores_gemma":[0.9972267,0.00035161752,0.0015986401,0.00022457236,0.0004508883,0.00014756643],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011321258,0.0002588359,0.00059425354,0.00023663887,0.00023325098,0.00006118531,0.0001346495,0.00061533385,0.00013129006],"category_scores_gemma":[0.001692815,0.00022346193,0.00026118266,0.00020502266,0.0002417772,0.0008821897,0.000042916883,0.000994583,0.00004480183],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033140488,0.00009166135,0.01442784,0.000023121971,0.000046285168,0.0000036202835,0.00065562496,0.000005572781,0.9708515,0.000058840164,0.002135306,0.011369256],"study_design_scores_gemma":[0.0012586591,0.0005969868,0.09093918,0.00016705814,0.00003500985,0.000024688045,0.00010142602,0.000011176917,0.90369815,0.00026501366,0.0027048674,0.00019779048],"about_ca_topic_score_codex":0.000009580085,"about_ca_topic_score_gemma":0.000003187805,"teacher_disagreement_score":0.07651134,"about_ca_system_score_codex":0.000087180524,"about_ca_system_score_gemma":0.00022067183,"threshold_uncertainty_score":0.9112513},"labels":[],"label_agreement":null},{"id":"W2117908470","doi":"10.1172/jci12877","title":"The chemokine KC, but not monocyte chemoattractant protein-1, triggers monocyte arrest on early atherosclerotic endothelium","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cell Adhesion Molecules Research","field":"Medicine","cited_by":265,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Heart, Lung, and Blood Institute; National Institutes of Health; University of British Columbia; Deutsche Forschungsgemeinschaft; American Heart Association","keywords":"Monocyte; Chemokine; Endothelium; CCR2; Cell adhesion molecule; Chemotaxis; Immunology; Biology; Cell biology; Chemokine receptor; Medicine; Inflammation; Receptor; Endocrinology; Internal medicine","score_opus":0.12162979325214075,"score_gpt":0.3830032502937111,"score_spread":0.26137345704157033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2117908470","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9795715,0.00012380003,0.0001414205,0.017616875,0.000458568,0.00079010637,0.0000018247174,0.00002830651,0.0012675789],"genre_scores_gemma":[0.98915124,0.0009391085,0.0011426042,0.0017257355,0.0014439509,0.000020091962,0.0000032153828,0.000056458626,0.0055175987],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9951775,0.000435768,0.0021792983,0.00032453565,0.0014357502,0.00044716397],"domain_scores_gemma":[0.9952155,0.0014997325,0.0013334448,0.0005480494,0.00062916556,0.00077413575],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0039403536,0.0002576792,0.00071205175,0.00016930528,0.00019375278,0.0001199392,0.0003947941,0.00026698085,0.000069969086],"category_scores_gemma":[0.0069927573,0.00016087005,0.0005168201,0.00037238182,0.0005265674,0.00019369222,0.000057129837,0.0017612202,0.00015066878],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.015180304,0.0012701933,0.028622705,0.00012091209,0.000481522,0.00076245656,0.00023763743,0.00012860418,0.866994,0.0005795277,0.002936039,0.0826861],"study_design_scores_gemma":[0.009949343,0.0053949235,0.32831573,0.0009208513,0.00022088161,0.00025586234,0.0001125976,0.0023917973,0.6236364,0.0016884143,0.026758686,0.00035445334],"about_ca_topic_score_codex":0.000024095662,"about_ca_topic_score_gemma":0.000004032367,"teacher_disagreement_score":0.29969302,"about_ca_system_score_codex":0.00018140493,"about_ca_system_score_gemma":0.00060897565,"threshold_uncertainty_score":0.8371489},"labels":[],"label_agreement":null},{"id":"W2118096986","doi":"10.1172/jci37958","title":"JNK1 determines the oncogenic or tumor-suppressive activity of the integrin-linked kinase in human rhabdomyosarcoma","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cell Adhesion Molecules Research","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"University of Toronto; Canadian Institutes of Health Research; Hospital for Sick Children; Monash University","keywords":"Integrin-linked kinase; Rhabdomyosarcoma; Cancer research; Oncogene; Biology; Kinase; Embryonal rhabdomyosarcoma; Alveolar rhabdomyosarcoma; Ectopic expression; Cell biology; Protein kinase A; Sarcoma; Cancer; Cell culture; Medicine; Cell cycle; Pathology; Genetics","score_opus":0.12515471181057022,"score_gpt":0.4412398777346267,"score_spread":0.31608516592405644,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2118096986","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98755634,0.000067805486,0.000029241815,0.011531113,0.00017434749,0.0004607231,0.000001224246,0.0000048790835,0.00017434823],"genre_scores_gemma":[0.9975492,0.00003887964,0.00045087808,0.0013601352,0.0003240293,0.00000395207,9.304859e-7,0.000010920475,0.00026111724],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.996455,0.0009076574,0.001525504,0.00016293857,0.000761548,0.00018735789],"domain_scores_gemma":[0.9964375,0.0011945327,0.001276761,0.00041933317,0.00045192416,0.00021995617],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002487431,0.00013428398,0.0005755171,0.00013967876,0.00007251824,0.000021126265,0.00042323017,0.00013832476,0.000058109432],"category_scores_gemma":[0.007805133,0.000062078194,0.0003924494,0.00043547328,0.00051204424,0.00014063477,0.00008521266,0.0014344341,0.0000032056498],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026554584,0.0010636825,0.11947541,0.00007874318,0.0000651182,0.00042005483,0.00041233088,0.00004656217,0.8100665,0.00015339497,0.0020150999,0.063547656],"study_design_scores_gemma":[0.0028813677,0.0017972332,0.8444199,0.00057985936,0.00008910687,0.00026383315,0.00008293859,0.0009595346,0.14551328,0.002840556,0.00049401296,0.00007835945],"about_ca_topic_score_codex":0.000029734167,"about_ca_topic_score_gemma":0.000056729798,"teacher_disagreement_score":0.72494453,"about_ca_system_score_codex":0.000075304924,"about_ca_system_score_gemma":0.0006569791,"threshold_uncertainty_score":0.93440366},"labels":[],"label_agreement":null},{"id":"W2118165245","doi":"10.1172/jci58488","title":"Ribosomal RACK1 promotes chemoresistance and growth in human hepatocellular carcinoma","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":148,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute on Alcohol Abuse and Alcoholism; National Key Research and Development Program of China; National High-tech Research and Development Program; Fudan University; Université de Sherbrooke","keywords":"EIF4E; Ribosome biogenesis; Cancer research; Biology; Translation (biology); Ribosomal protein s6; Cell growth; Initiation factor; Internal ribosome entry site; Downregulation and upregulation; Hepatocellular carcinoma; Protein biosynthesis; Kinase; Ribosome; Cell biology; Protein kinase A; Molecular biology; Messenger RNA; RNA; Protein phosphorylation; Genetics; Gene","score_opus":0.049031260022167365,"score_gpt":0.3176034808534566,"score_spread":0.26857222083128923,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2118165245","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99796385,0.0009934623,0.00038774128,0.00027997093,0.00015078737,0.00009684366,9.765533e-7,0.0000019205556,0.00012445822],"genre_scores_gemma":[0.9956915,0.00008303625,0.003211773,0.00017912382,0.0007678268,0.0000032085802,0.000005268954,0.00001100856,0.000047301102],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986393,0.00022465734,0.00071962085,0.00012126477,0.00014410405,0.00015108493],"domain_scores_gemma":[0.9990983,0.000052673677,0.0004594442,0.00010062978,0.000104186896,0.00018477763],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017854872,0.0000934325,0.00023459927,0.000041152893,0.000037050686,0.000015765308,0.00010404797,0.0001786283,0.000005683338],"category_scores_gemma":[0.00093897845,0.00007960627,0.00008765128,0.000054282184,0.000114715265,0.00002180077,0.000032877804,0.00015975292,0.0000012545709],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041799412,0.000043820757,0.5952215,0.000017081886,0.00000954529,0.0000030332028,0.00003969396,2.1254053e-7,0.40371326,0.00037010794,0.00007020252,0.0004697337],"study_design_scores_gemma":[0.0005205956,0.00027266564,0.32117268,0.00004231574,0.000015497666,0.000022522223,0.000018072269,0.000020845317,0.67366254,0.0039813183,0.00018439311,0.00008655387],"about_ca_topic_score_codex":0.000005912099,"about_ca_topic_score_gemma":0.0000017753486,"teacher_disagreement_score":0.27404884,"about_ca_system_score_codex":0.000007058305,"about_ca_system_score_gemma":0.000055121927,"threshold_uncertainty_score":0.32462493},"labels":[],"label_agreement":null},{"id":"W2118384803","doi":"10.1172/jci13397","title":"The multiple contributions of thyroid hormone to heat production","year":2001,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Physiological and biochemical adaptations","field":"Environmental Science","cited_by":66,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital","funders":"","keywords":"Homeothermy; Poikilotherm; Facultative; Thermogenesis; Thermoregulation; Set point; Thermodynamics; Biology; Chemistry; Ecology; Endocrinology; Physics","score_opus":0.06377023524449853,"score_gpt":0.32464146219659706,"score_spread":0.2608712269520985,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2118384803","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3778007,0.00011409098,0.00031979723,0.62068856,0.0006027125,0.00026489844,0.000024343512,0.000009127832,0.0001757654],"genre_scores_gemma":[0.74343777,0.0010229783,0.003911198,0.23864879,0.010948862,0.000028080667,0.00012902998,0.000028270959,0.0018450035],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99712425,0.00031242264,0.001571351,0.00021873142,0.0005666072,0.00020665542],"domain_scores_gemma":[0.997256,0.0012587907,0.00089399016,0.00022589187,0.00018862826,0.00017673941],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012462187,0.00014688069,0.00042917396,0.000029406394,0.00015370519,0.000022125729,0.00037512984,0.00039459506,0.000045257675],"category_scores_gemma":[0.007583899,0.000081778075,0.00030960233,0.0003257175,0.00067673496,0.00013815661,0.0000982401,0.0013264923,0.000072999166],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006225107,0.00006174491,0.0009352118,0.0000034111588,0.000027822403,0.000004242016,0.000014218085,0.0004190182,0.15041713,0.000008526026,0.84687066,0.001175764],"study_design_scores_gemma":[0.00062199065,0.0013734201,0.066692434,0.00011241942,0.0001454341,0.00003209779,0.000021832684,0.0002947639,0.021882536,0.025203515,0.8833401,0.0002794415],"about_ca_topic_score_codex":0.000042973697,"about_ca_topic_score_gemma":0.000010187799,"teacher_disagreement_score":0.3820398,"about_ca_system_score_codex":0.00008623896,"about_ca_system_score_gemma":0.000054685348,"threshold_uncertainty_score":0.90791833},"labels":[],"label_agreement":null},{"id":"W2118719488","doi":"10.1172/jci44972","title":"Rapamycin reverses hypertrophic cardiomyopathy in a mouse model of LEOPARD syndrome–associated PTPN11 mutation","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Protein Tyrosine Phosphatases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":277,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research; University of Toronto; Princess Margaret Cancer Centre","funders":"Fundação de Amparo à Pesquisa do Estado de São Paulo; National Heart, Lung, and Blood Institute; National Cancer Institute; National Institutes of Health; Ontario Ministry of Health and Long-Term Care; Howard Hughes Medical Institute","keywords":"PTPN11; Noonan syndrome; Protein tyrosine phosphatase; Hypertrophic cardiomyopathy; Biology; Endocrinology; PI3K/AKT/mTOR pathway; Cancer research; MAPK/ERK pathway; Mutation; PTEN; Internal medicine; Cardiomyopathy; Cell biology; Medicine; Signal transduction; Genetics; Heart failure; Gene","score_opus":0.08745430573202027,"score_gpt":0.31590852145088943,"score_spread":0.22845421571886915,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2118719488","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99785984,0.00073255756,0.0010099054,0.000073965726,0.00012723652,0.00013203466,0.000026148055,0.000003958295,0.000034338835],"genre_scores_gemma":[0.9931207,0.00024317195,0.0063082282,0.00016956222,0.000067021894,0.0000045944175,0.000032886546,0.000014742373,0.000039140676],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979107,0.0002923396,0.0012810162,0.00016406574,0.00022470394,0.00012720624],"domain_scores_gemma":[0.99818164,0.00005417469,0.0011353105,0.00018750285,0.0003263906,0.000114986295],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001518423,0.000113308626,0.00041262043,0.000100842284,0.000018499612,0.000006546641,0.00017428589,0.00021202657,0.000004292099],"category_scores_gemma":[0.0034330992,0.0001039581,0.00021049277,0.00013244142,0.00016759198,0.00002765725,0.00004247648,0.00021623437,0.0000016214842],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015980722,0.00080508535,0.32353112,0.0001146423,0.0004114424,0.00011369641,0.0004276347,0.008632587,0.6598814,0.00084251515,0.0012214114,0.0024203786],"study_design_scores_gemma":[0.002420664,0.0017451944,0.075190276,0.0001670747,0.00010256441,0.000061896724,0.000057972,0.002164144,0.9133233,0.004544382,0.000024023851,0.00019851798],"about_ca_topic_score_codex":0.000050124654,"about_ca_topic_score_gemma":0.000022151247,"teacher_disagreement_score":0.25344187,"about_ca_system_score_codex":0.000019568213,"about_ca_system_score_gemma":0.00027996223,"threshold_uncertainty_score":0.4239288},"labels":[],"label_agreement":null},{"id":"W2118765054","doi":"10.1172/jci34371","title":"High incidence of leukemia in large animals after stem cell gene therapy with a HOXB4-expressing retroviral vector","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":107,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institutes of Health; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; University of Washington","keywords":"Genetic enhancement; Viral vector; Leukemia; Biology; Cancer research; Transgene; Transplantation; Vector (molecular biology); Stem cell; Myeloid; Gene knockdown; Myeloid leukemia; Virology; Murine leukemia virus; Gammaretrovirus; Immunology; Cell culture; Medicine; Gene; Genetics; Internal medicine","score_opus":0.053484268265918324,"score_gpt":0.3462642771937446,"score_spread":0.29278000892782624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2118765054","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981977,0.0012465636,0.00021763578,0.000107738626,0.00008549578,0.00012473638,0.000006683106,0.0000024356586,0.000011030327],"genre_scores_gemma":[0.99579966,0.0009502202,0.0024910385,0.00031479422,0.0003661894,0.0000050588624,0.000005471224,0.000021177833,0.000046376503],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977071,0.0004573735,0.0010135361,0.0002081007,0.0004081757,0.00020571366],"domain_scores_gemma":[0.9984595,0.00009014216,0.00074840605,0.00024016979,0.00031146547,0.00015032719],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015953464,0.0001294482,0.00037052183,0.000091212794,0.000035794244,0.0000130030985,0.00022428538,0.00019860265,0.00001542184],"category_scores_gemma":[0.00014402288,0.00009909045,0.00013251169,0.00017259608,0.00026158843,0.000022748129,0.000041046853,0.00036782198,0.0000017479224],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007180417,0.000081395614,0.23530093,0.000013224314,0.000033448378,0.00004729351,0.00011027435,0.0003085679,0.7561908,0.0000017739237,0.00009711914,0.0006347614],"study_design_scores_gemma":[0.002516157,0.006901433,0.22895072,0.000074028496,0.0000073907263,0.00002605144,0.000020622365,0.00008902537,0.76117253,0.000052734973,0.000087152934,0.00010211245],"about_ca_topic_score_codex":0.000017611743,"about_ca_topic_score_gemma":0.00004656887,"teacher_disagreement_score":0.0068200375,"about_ca_system_score_codex":0.000049772432,"about_ca_system_score_gemma":0.00095101737,"threshold_uncertainty_score":0.40407914},"labels":[],"label_agreement":null},{"id":"W2118852930","doi":"10.1172/jci28277","title":"A public T cell clonotype within a heterogeneous autoreactive repertoire is dominant in driving EAE","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institutes of Health; National Institute of Allergy and Infectious Diseases; Multiple Sclerosis Society; University of California Davis School of Medicine; National Multiple Sclerosis Society","keywords":"Experimental autoimmune encephalomyelitis; Immunology; Multiple sclerosis; Biology; Repertoire; Spleen; Myelin basic protein; Lymph; T cell; Immunization; Myelin; Neuroscience; Medicine; Immune system; Central nervous system; Pathology","score_opus":0.05858409325426539,"score_gpt":0.3137709818482216,"score_spread":0.2551868885939562,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2118852930","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942788,0.0010748638,0.0002445707,0.0015110251,0.002290641,0.00013689043,0.0000017456047,0.00001690598,0.00044455257],"genre_scores_gemma":[0.9973251,0.0001218516,0.000714414,0.00094945857,0.00018290823,0.000001956519,0.000009242603,0.000018614894,0.00067643763],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.996304,0.00057188276,0.00234896,0.00028887406,0.00008959269,0.00039673017],"domain_scores_gemma":[0.9965633,0.0010006272,0.0017790712,0.0002524765,0.00030050395,0.00010398204],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0040613655,0.00019622849,0.0006653406,0.00030185503,0.00011270632,0.000025377884,0.00030796262,0.0006791879,0.000120570025],"category_scores_gemma":[0.0016310852,0.00015441608,0.00028073098,0.00025943972,0.0005195869,0.00028201102,0.00007592753,0.0013438452,0.00011836319],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004887326,0.00042672988,0.076115884,0.000011344109,0.00012806762,0.00012509905,0.0011181654,0.000014581152,0.91471153,0.00017721069,0.0007831655,0.005899475],"study_design_scores_gemma":[0.0048914556,0.0016592778,0.04128818,0.00018170255,0.00009252803,0.00074863795,0.0003622898,0.00008347283,0.93268,0.003220715,0.014465706,0.00032601028],"about_ca_topic_score_codex":0.000067082234,"about_ca_topic_score_gemma":0.00014846121,"teacher_disagreement_score":0.0348277,"about_ca_system_score_codex":0.00009896107,"about_ca_system_score_gemma":0.0003891994,"threshold_uncertainty_score":0.62969047},"labels":[],"label_agreement":null},{"id":"W2119167266","doi":"10.1172/jci32567","title":"TNF-α is critical for antitumor but not antiviral T cell immunity in mice","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":222,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto; Ontario Institute for Cancer Research","funders":"National Cancer Institute; University of Toronto; Terry Fox Foundation; Campbell Family Institute for Breast Cancer Research","keywords":"Tumor necrosis factor alpha; Immunology; Immune system; Immunity; Inflammation; TLR2; Cytokine; Priming (agriculture); T cell; Acquired immune system; Medicine; Biology; Cancer research; Innate immune system","score_opus":0.06735948535393264,"score_gpt":0.38258413756802007,"score_spread":0.3152246522140874,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2119167266","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938386,0.0003558705,0.0021394857,0.0019572699,0.0012019511,0.00014897539,0.000005948656,0.000008686876,0.00034318023],"genre_scores_gemma":[0.9965511,0.00008724998,0.0017033464,0.0010596465,0.00021191432,0.0000015029135,0.000016071444,0.0000102278555,0.00035894322],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99711835,0.0004880207,0.001928084,0.00013045134,0.00007102498,0.00026404604],"domain_scores_gemma":[0.9957255,0.0030209469,0.00070623116,0.00012973364,0.00037449098,0.000043083273],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0066175503,0.00011663589,0.00043887435,0.00020647059,0.00009756744,0.00001892756,0.00019199454,0.00037084462,0.00004289343],"category_scores_gemma":[0.0050628493,0.00010188544,0.00024777456,0.0001366333,0.00035507523,0.00039681667,0.000029199686,0.00074280245,0.00007177969],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024701415,0.00025014195,0.013661271,0.000051387426,0.00004162843,0.000014716594,0.00032585498,0.0000021105209,0.9725644,0.0010372924,0.0021695488,0.0074114786],"study_design_scores_gemma":[0.002362065,0.00065740023,0.14546236,0.000098870514,0.000045108452,0.00003908577,0.00024918607,0.00003121475,0.84516174,0.0013686917,0.0044103283,0.00011394795],"about_ca_topic_score_codex":0.000026486729,"about_ca_topic_score_gemma":0.000008559936,"teacher_disagreement_score":0.1318011,"about_ca_system_score_codex":0.000033038083,"about_ca_system_score_gemma":0.00022622077,"threshold_uncertainty_score":0.6061069},"labels":[],"label_agreement":null},{"id":"W2119374840","doi":"10.1172/jci35891","title":"Mutant prominin 1 found in patients with macular degeneration disrupts photoreceptor disk morphogenesis in mice","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Retinal Development and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":272,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Research Institute in Oncology and Hematology","funders":"National Center for Research Resources; National Eye Institute; National Institutes of Health; Deutsches Krebsforschungszentrum","keywords":"Morphogenesis; Biology; Cell biology; Mutant; Retina; Macular degeneration; Retinal degeneration; Genetics; Gene; Neuroscience; Medicine; Ophthalmology","score_opus":0.027987413645094363,"score_gpt":0.2913927393811662,"score_spread":0.26340532573607184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2119374840","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99931234,0.00008662101,0.00011276236,0.00012003463,0.0001511175,0.00017721158,0.0000017917142,0.0000012932368,0.00003685164],"genre_scores_gemma":[0.9964132,0.00012383932,0.0030263604,0.00018635188,0.000118266355,0.0000063053626,0.00008610739,0.000011206415,0.000028378961],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99842787,0.00015646736,0.0008768016,0.00017353448,0.00024145358,0.0001238459],"domain_scores_gemma":[0.99915075,0.00003150081,0.0004434073,0.000079792124,0.00019304406,0.00010148075],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005500539,0.000109668574,0.00022617966,0.000080774276,0.000030426918,0.000011438652,0.00009854082,0.00013251962,0.000009600337],"category_scores_gemma":[0.000535002,0.000085381085,0.00006344909,0.00017982197,0.00011209209,0.00002288897,0.000018915607,0.00013277438,0.0000019379045],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00060243084,0.0001717511,0.97400194,0.0000082541665,0.00001867114,0.000009628008,0.00007788143,0.00022013592,0.024224723,0.0000037869654,0.00020747224,0.00045330077],"study_design_scores_gemma":[0.0026560826,0.0007710447,0.9688558,0.000058628488,0.000012149984,0.000007312182,0.000024710345,0.00009230175,0.027013713,0.00006551207,0.0003139205,0.00012881016],"about_ca_topic_score_codex":0.000010842616,"about_ca_topic_score_gemma":0.00008188605,"teacher_disagreement_score":0.005146151,"about_ca_system_score_codex":0.000023948736,"about_ca_system_score_gemma":0.00026852777,"threshold_uncertainty_score":0.34817395},"labels":[],"label_agreement":null},{"id":"W2119791968","doi":"10.1172/jci30767","title":"HPV vaccine gets a shot in the arm","year":2006,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; HPV vaccines; Cervical cancer; Gardasil; Measles; Family medicine; Vaccination; Measles-Mumps-Rubella Vaccine; Legislation; Rubella; Promiscuity; Rubella vaccine; Virology; HPV infection; Political science; Cancer; Law; Psychology","score_opus":0.18497553864569757,"score_gpt":0.47083997417639456,"score_spread":0.28586443553069696,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2119791968","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95012486,0.0005688794,0.000057382746,0.03091351,0.00020089297,0.00016274358,6.7166184e-7,0.0000047483345,0.017966323],"genre_scores_gemma":[0.9940676,0.00016066054,0.00038857444,0.0032543312,0.0019619546,0.0000022962272,0.0000044062285,0.0000062804493,0.00015389465],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979225,0.00022034755,0.0011465014,0.000091138674,0.00048240589,0.00013711644],"domain_scores_gemma":[0.9984311,0.0007069495,0.00028372012,0.00013673767,0.00030178766,0.00013970061],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0033282088,0.000063770785,0.00032521956,0.00010153369,0.00002634629,0.000023244924,0.00013033143,0.00009543529,0.00054510613],"category_scores_gemma":[0.0016773336,0.000035799832,0.00016924083,0.00021441044,0.00007922362,0.00009605006,0.000015083834,0.0007898004,0.000015001394],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022348287,0.001505265,0.7865855,0.00015497698,0.00006913327,0.0005205135,0.00039061496,0.00011001624,0.00071972,0.0029180867,0.046226814,0.15856454],"study_design_scores_gemma":[0.0025912786,0.0008323479,0.969571,0.000033597225,0.000041415064,0.000094941744,0.000048748294,0.00032475984,0.00026253785,0.015602387,0.010558571,0.00003842641],"about_ca_topic_score_codex":0.00007925355,"about_ca_topic_score_gemma":0.00014909418,"teacher_disagreement_score":0.1829855,"about_ca_system_score_codex":0.00003702448,"about_ca_system_score_gemma":0.00024993756,"threshold_uncertainty_score":0.596853},"labels":[],"label_agreement":null},{"id":"W2120421571","doi":"10.1172/jci37515","title":"Confirming the RNAi-mediated mechanism of action of siRNA-based cancer therapeutics in mice","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":329,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Arbutus Biopharma (Canada)","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"RNA interference; Mechanism (biology); Mechanism of action; Cancer research; Cancer; Biology; Action (physics); Small interfering RNA; Computational biology; Cell biology; Bioinformatics; Chemistry; RNA; Genetics; Gene; In vitro","score_opus":0.11322939770760516,"score_gpt":0.40136410980355613,"score_spread":0.288134712095951,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2120421571","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970151,0.00028467082,0.0009842068,0.0013873085,0.00023569088,0.000059610826,0.0000030846825,8.462399e-7,0.000029464627],"genre_scores_gemma":[0.9973933,0.0006432435,0.0003225617,0.0014352978,0.00018210303,7.429893e-7,0.0000053375766,0.0000037028208,0.000013726763],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99868476,0.00016027415,0.0008657592,0.00007689948,0.00014428861,0.00006799143],"domain_scores_gemma":[0.99850523,0.00011441561,0.00094688765,0.00009404361,0.00030217553,0.000037231704],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008483676,0.0000626161,0.0001988882,0.00004474562,0.000013247714,0.0000046650184,0.0001390997,0.00014294765,0.0000059028634],"category_scores_gemma":[0.00032627894,0.000043590862,0.000121946425,0.00008600882,0.00009512375,0.000008255169,0.000007464316,0.00017640258,3.632589e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021935502,0.00006585357,0.0048334487,0.000008373726,0.000037282458,7.24658e-7,0.000049453694,0.0004624477,0.98679936,0.000055400153,0.00009071245,0.007377578],"study_design_scores_gemma":[0.00072037603,0.0009694447,0.031862363,0.00011521905,0.00004317883,0.0000024524702,0.000080713595,0.00158594,0.9631151,0.0011821352,0.0002716144,0.000051460505],"about_ca_topic_score_codex":0.000034618628,"about_ca_topic_score_gemma":0.000054723492,"teacher_disagreement_score":0.027028915,"about_ca_system_score_codex":0.000007802058,"about_ca_system_score_gemma":0.00023979117,"threshold_uncertainty_score":0.17775838},"labels":[],"label_agreement":null},{"id":"W2120817558","doi":"10.1172/jci30630","title":"Disruption of erythroid K-Cl cotransporters alters erythrocyte volume and partially rescues erythrocyte dehydration in SAD mice","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Erythrocyte Function and Pathophysiology","field":"Medicine","cited_by":93,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Clinical Research Institute","funders":"National Heart, Lung, and Blood Institute; Canadian Institutes of Health Research; National Institutes of Health; Deutsche Forschungsgemeinschaft","keywords":"Cotransporter; Mean corpuscular volume; Red blood cell; Chemistry; Hemoglobin; Internal medicine; Endocrinology; Mean corpuscular hemoglobin concentration; Bumetanide; Red Cell; Molecular biology; Biology; Biochemistry; Medicine; Sodium","score_opus":0.055455921939720494,"score_gpt":0.3594736438894574,"score_spread":0.3040177219497369,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2120817558","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9908338,0.0003442057,0.005553427,0.0019587998,0.00087271986,0.00025117482,0.0000034617226,0.000017802611,0.00016456068],"genre_scores_gemma":[0.99164784,0.0012260119,0.00496227,0.00133334,0.00069431914,0.0000017201487,0.000033715987,0.000020852789,0.000079929865],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9959963,0.0002522386,0.002793351,0.00027180885,0.00043537372,0.0002509556],"domain_scores_gemma":[0.9970523,0.00047868898,0.0014924986,0.00018137918,0.00044269176,0.00035241712],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0031933319,0.00019062115,0.000849812,0.00034119832,0.000050759536,0.000013579939,0.00007893646,0.00033304046,0.00003744692],"category_scores_gemma":[0.0009818967,0.00016662701,0.00024798917,0.00033186565,0.00054900144,0.00046199423,0.000016814209,0.0006410196,0.000007112843],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00724494,0.0004809976,0.7341808,0.0003504877,0.00017904709,0.00015085316,0.0014727922,0.00035528452,0.2321532,0.00030089924,0.00082226633,0.022308387],"study_design_scores_gemma":[0.004272677,0.0025076538,0.9705324,0.00056926504,0.00021747334,0.00020701237,0.00039123275,0.0011079087,0.017687282,0.001064642,0.0012725638,0.00016988955],"about_ca_topic_score_codex":0.00004266953,"about_ca_topic_score_gemma":0.00028997508,"teacher_disagreement_score":0.23635156,"about_ca_system_score_codex":0.00007783739,"about_ca_system_score_gemma":0.0002842821,"threshold_uncertainty_score":0.6794852},"labels":[],"label_agreement":null},{"id":"W2121260651","doi":"10.1172/jci45563","title":"Mice overexpressing BAFF develop a commensal flora–dependent, IgA-associated nephropathy","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Renal Diseases and Glomerulopathies","field":"Medicine","cited_by":278,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; McMaster University; Population Health Research Institute; University of Toronto","funders":"University of Toronto; National Institute of Diabetes and Digestive and Kidney Diseases; Kidney Foundation of Canada; Canadian Institutes of Health Research; Biogen","keywords":"B-cell activating factor; Nephropathy; Immunology; Immunoglobulin A; Immune system; Biology; Renal pathology; Glomerulonephritis; Antibody; B cell; Immunoglobulin G; Endocrinology; Kidney; Diabetes mellitus","score_opus":0.13183882228131202,"score_gpt":0.3688347088072599,"score_spread":0.23699588652594786,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121260651","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99644613,0.00044989248,0.00033884207,0.0009092755,0.00066449534,0.00012363991,0.000007653939,0.00002562354,0.0010344564],"genre_scores_gemma":[0.9898147,0.0002637239,0.005942586,0.0031490421,0.0006448316,0.0000016775579,0.00001577347,0.00002253127,0.00014515214],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9969032,0.00036741162,0.0017815671,0.00017401858,0.0005576132,0.00021619542],"domain_scores_gemma":[0.9965574,0.0003566291,0.0014895503,0.00016513145,0.00086604897,0.0005652268],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019027115,0.00016329419,0.0006442196,0.00012677083,0.00008743886,0.000038554128,0.00013229475,0.00021170446,0.00012051575],"category_scores_gemma":[0.005621596,0.00012464801,0.00031422163,0.00027314594,0.0002178431,0.00037625188,0.00004749038,0.0006309246,0.000030522355],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026147412,0.0015337995,0.9343442,0.00022081057,0.0007353367,0.0007600717,0.0021789346,0.000010403504,0.01642218,0.00050477573,0.019553047,0.021121733],"study_design_scores_gemma":[0.0034741485,0.0011660556,0.98308635,0.0011600347,0.00049483153,0.00016075814,0.00024737578,0.00034595307,0.004471075,0.004141564,0.001062486,0.00018939805],"about_ca_topic_score_codex":0.000031357653,"about_ca_topic_score_gemma":0.0000057891607,"teacher_disagreement_score":0.048742153,"about_ca_system_score_codex":0.000059412865,"about_ca_system_score_gemma":0.00056780205,"threshold_uncertainty_score":0.67299813},"labels":[],"label_agreement":null},{"id":"W2122002065","doi":"10.1172/jci41963","title":"Real-time imaging of trapping and urease-dependent transmigration of Cryptococcus neoformans in mouse brain","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":216,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Cryptococcus neoformans; Microbiology; Meningoencephalitis; Blood–brain barrier; Biology; Cryptococcosis; Pathogen; Encephalitis; Immunology; Central nervous system; Virus; Neuroscience","score_opus":0.03541368452398917,"score_gpt":0.3535312973903114,"score_spread":0.31811761286632223,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122002065","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966799,0.000041669213,0.00023772173,0.002452644,0.00012182726,0.00014557417,0.0000027271349,0.0000052808864,0.00031266705],"genre_scores_gemma":[0.9971657,0.00020040899,0.0023254566,0.00010979234,0.00013843583,0.0000016198649,0.000002105591,0.0000066137677,0.00004988495],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99823594,0.00008551595,0.0013276861,0.00007869706,0.00019331682,0.0000788248],"domain_scores_gemma":[0.9984806,0.00043148882,0.00063938927,0.00008055289,0.0002596998,0.000108265776],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017959541,0.000071385286,0.000426285,0.00018152069,0.000025678666,0.000006546985,0.00003245953,0.000082532824,0.000017969487],"category_scores_gemma":[0.0011893645,0.000055710105,0.000120048884,0.00012273327,0.00020417248,0.00019944429,0.000007420268,0.00039716833,5.7431737e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018106017,0.00017306017,0.36110047,0.000095694355,0.000047599602,0.000006590825,0.00074711215,0.000040430623,0.6327338,0.00024718634,0.00028379442,0.0043431716],"study_design_scores_gemma":[0.0035433855,0.00089428347,0.92912924,0.00043077747,0.00012813527,0.0000963407,0.00031795487,0.005424249,0.058067247,0.0017507582,0.00012104542,0.00009660851],"about_ca_topic_score_codex":0.00009882318,"about_ca_topic_score_gemma":0.00009297684,"teacher_disagreement_score":0.57466656,"about_ca_system_score_codex":0.000010895085,"about_ca_system_score_gemma":0.00011940629,"threshold_uncertainty_score":0.22717921},"labels":[],"label_agreement":null},{"id":"W2122311980","doi":"10.1172/jci31692","title":"CX3CR1-dependent subretinal microglia cell accumulation is associated with cardinal features of age-related macular degeneration","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Retinal Diseases and Treatments","field":"Medicine","cited_by":623,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine","funders":"Institut National de la Santé et de la Recherche Médicale; Agence Nationale de la Recherche","keywords":"CX3CR1; Macular degeneration; Drusen; Retinal; Microglia; Choroidal neovascularization; Retinal degeneration; Biology; Retina; Pathology; Medicine; Ophthalmology; Chemokine receptor; Chemokine; Immunology; Neuroscience; Inflammation","score_opus":0.06640584605646863,"score_gpt":0.38246104786242296,"score_spread":0.31605520180595437,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122311980","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977867,0.00037080355,0.00048008247,0.00046086797,0.00020429956,0.00023651593,0.000009605714,0.000010769453,0.0004403551],"genre_scores_gemma":[0.9964065,0.00006359128,0.0025161556,0.00029896,0.00020694293,8.866583e-7,0.000107689775,0.000019198103,0.00038007298],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99716973,0.00019137182,0.0015275005,0.0001798067,0.0007599815,0.00017159535],"domain_scores_gemma":[0.9967729,0.00024668657,0.0016716123,0.00014462408,0.0008318391,0.00033234365],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016695102,0.0001606432,0.0005642936,0.00014436828,0.000056493296,0.000024338855,0.000070007765,0.00023448949,0.00004053923],"category_scores_gemma":[0.00064355717,0.000115411356,0.00035317772,0.00022867955,0.000164759,0.00016838417,0.000012472552,0.0003991681,0.000004355082],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026465615,0.0007518042,0.9567198,0.00007398713,0.0006813356,0.00066152896,0.00024034642,0.00021701334,0.033189725,0.00009327525,0.0007763517,0.0039482266],"study_design_scores_gemma":[0.004753495,0.0019444679,0.9421778,0.00039729624,0.0012051491,0.00013733782,0.000056739544,0.00025696505,0.048369374,0.00055804104,0.000037346214,0.000106023355],"about_ca_topic_score_codex":0.00003051937,"about_ca_topic_score_gemma":0.000011093782,"teacher_disagreement_score":0.015179649,"about_ca_system_score_codex":0.000102504295,"about_ca_system_score_gemma":0.00025869612,"threshold_uncertainty_score":0.47063386},"labels":[],"label_agreement":null},{"id":"W2122553885","doi":"10.1172/jci24918","title":"Osteoblast-derived PTHrP is a potent endogenous bone anabolic agent that modifies the therapeutic efficacy of administered PTH 1-34","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Bone health and treatments","field":"Medicine","cited_by":277,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Victoria Hospital","funders":"Canadian Arthritis Network; National Institute of Arthritis and Musculoskeletal and Skin Diseases; Canadian Institutes of Health Research; Lady Davis Institute for Medical Research; National Cancer Institute; National Institutes of Health; Jewish General Hospital; McGill University","keywords":"Osteoblast; Endocrinology; Anabolism; Internal medicine; Parathyroid hormone; Endogeny; Parathyroid hormone-related protein; Osteoporosis; Bone remodeling; Chemistry; Anabolic Agents; Medicine; Calcium; Biochemistry; In vitro","score_opus":0.25297000598563824,"score_gpt":0.40863365569462096,"score_spread":0.15566364970898272,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122553885","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9728323,0.0018844553,0.00007048041,0.024122432,0.0003119793,0.0004902327,0.0000050042518,0.000012349691,0.00027073966],"genre_scores_gemma":[0.98955286,0.0010490608,0.0011447652,0.0076285265,0.00042639129,0.0000061688406,0.000006483667,0.000020835763,0.00016492353],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9968285,0.00031531873,0.001828831,0.0001745998,0.0006022924,0.0002504749],"domain_scores_gemma":[0.9966722,0.00060295186,0.0016195204,0.00033149004,0.000291786,0.000482063],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011064258,0.00017973149,0.00074874033,0.000106567015,0.00009942116,0.000019839685,0.00013024657,0.00016202775,0.00006256926],"category_scores_gemma":[0.00054721115,0.00010578703,0.00042551663,0.00015562217,0.00030204782,0.00012814206,0.000027189062,0.00047638928,0.000032259948],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0073411255,0.0045130057,0.16424017,0.0003592861,0.0020935738,0.00027290764,0.008992841,0.00016541788,0.017862456,0.00030438413,0.0021701439,0.7916847],"study_design_scores_gemma":[0.015756141,0.005789958,0.93184656,0.0005839829,0.0012854118,0.0008434835,0.00055988145,0.00073158415,0.034436215,0.0011582251,0.0068091494,0.00019943489],"about_ca_topic_score_codex":0.00004386076,"about_ca_topic_score_gemma":0.000017136323,"teacher_disagreement_score":0.79148525,"about_ca_system_score_codex":0.00008069291,"about_ca_system_score_gemma":0.0005865757,"threshold_uncertainty_score":0.431387},"labels":[],"label_agreement":null},{"id":"W2122597070","doi":"10.1172/jci46134","title":"PTHrP drives breast tumor initiation, progression, and metastasis in mice and is a potential therapy target","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Bone health and treatments","field":"Medicine","cited_by":126,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital; McGill University Health Centre","funders":"Canadian Institutes of Health Research; McGill University Health Centre; McGill University; Susan G. Komen for the Cure; U.S. Department of Defense","keywords":"Metastasis; Tumor progression; Parathyroid hormone-related protein; Cancer research; Cancer; Angiogenesis; Breast cancer; Medicine; Cyclin D1; Internal medicine; Biology; Cell cycle; Parathyroid hormone","score_opus":0.10422920311868719,"score_gpt":0.400679060061798,"score_spread":0.29644985694311077,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122597070","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99416506,0.0010808598,0.000041536197,0.004296658,0.00012829696,0.0002075577,0.000005067557,0.000005541352,0.0000694389],"genre_scores_gemma":[0.9809838,0.0008744111,0.0156111615,0.0023830938,0.00011706522,0.000004064019,0.0000046444925,0.000008943015,0.000012830005],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983614,0.00018520434,0.0009933473,0.00013572,0.00020687073,0.000117449155],"domain_scores_gemma":[0.9986044,0.00010005562,0.00064660306,0.00006424131,0.00021967456,0.00036498863],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00092477835,0.000095231655,0.000382252,0.00012139197,0.000042847776,0.000013004518,0.000029599669,0.00008527885,0.00004544025],"category_scores_gemma":[0.00031010876,0.000065110195,0.00006335906,0.00011364013,0.00017616215,0.0002606157,0.000012011706,0.0002708319,0.000002068902],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009871778,0.00038376768,0.9656143,0.00003976073,0.00008923956,0.00009361613,0.00097448577,1.2636009e-7,0.00021722245,0.000050754716,0.0002911237,0.03125843],"study_design_scores_gemma":[0.0046511334,0.0010434022,0.98665994,0.0002149395,0.000086529755,0.00056219555,0.000075575444,0.00010789664,0.0012300815,0.0051373974,0.00017576928,0.000055154815],"about_ca_topic_score_codex":0.000036356858,"about_ca_topic_score_gemma":0.0000062106155,"teacher_disagreement_score":0.031203276,"about_ca_system_score_codex":0.000012479384,"about_ca_system_score_gemma":0.00024915105,"threshold_uncertainty_score":0.26551166},"labels":[],"label_agreement":null},{"id":"W2122843018","doi":"10.1172/jci36079","title":"Science rides the online wave","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Wikis in Education and Collaboration","field":"Social Sciences","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"World Wide Web; The Internet; Subject (documents); Internet privacy; Social media; Web 2.0; Computer science; Public relations; Political science","score_opus":0.27309583261533915,"score_gpt":0.4908213780092017,"score_spread":0.21772554539386257,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122843018","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95942366,0.000056495715,0.0001235934,0.034141887,0.0019842186,0.000071455936,5.785494e-7,0.0000086429645,0.0041894913],"genre_scores_gemma":[0.9910799,0.00036394026,0.0029049525,0.0022888796,0.0024886911,6.1735733e-7,6.675738e-7,0.000002667593,0.00086967886],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"observational","domain_scores_codex":[0.99793077,0.00037986826,0.0007426881,0.000080117075,0.00075487647,0.00011170368],"domain_scores_gemma":[0.9970743,0.0006364174,0.00072015385,0.00010910055,0.0012657347,0.00019429147],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0062427814,0.000041083582,0.000121695186,0.00010053604,0.00079649757,0.000067301495,0.00028538247,0.000058976628,0.0000534094],"category_scores_gemma":[0.0138020525,0.000026659302,0.0000711639,0.0010284993,0.002650987,0.0006489518,0.0000146947195,0.00026297782,0.000011300955],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012842515,0.0010531999,0.26415133,0.000009828517,0.00006562433,0.000024844769,0.08412714,0.0003303205,0.0027532207,0.44921213,0.113328144,0.0848158],"study_design_scores_gemma":[0.0005945198,0.0003422995,0.6369794,0.000060475853,0.000038464175,0.000036114034,0.013719745,0.0005083802,0.0009603792,0.045934,0.30066866,0.00015752892],"about_ca_topic_score_codex":0.00004282592,"about_ca_topic_score_gemma":0.00011078418,"teacher_disagreement_score":0.4032781,"about_ca_system_score_codex":0.00006237945,"about_ca_system_score_gemma":0.00466325,"threshold_uncertainty_score":0.9945051},"labels":[],"label_agreement":null},{"id":"W2123366371","doi":"10.1172/jci81676","title":"MicroRNA-33–dependent regulation of macrophage metabolism directs immune cell polarization in atherosclerosis","year":2015,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune cells in cancer","field":"Immunology and Microbiology","cited_by":388,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; University of Ottawa; Bell (Canada)","funders":"National Center for Advancing Translational Sciences; National Heart, Lung, and Blood Institute; Canadian Institutes of Health Research; National Cancer Institute; National Institutes of Health; Canada Research Chairs; National Institute of Allergy and Infectious Diseases; NYU Langone Medical Center; American Heart Association","keywords":"Macrophage polarization; Biology; Inflammation; Cell biology; Immune system; FOXP3; Macrophage; Immunology; Biochemistry","score_opus":0.057737858493259256,"score_gpt":0.31737374082739545,"score_spread":0.2596358823341362,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2123366371","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9909456,0.004546956,0.00038625955,0.00033739285,0.0033311076,0.00016343301,0.000008441944,0.000009999281,0.00027085084],"genre_scores_gemma":[0.9968496,0.00028444463,0.0016206676,0.00013366832,0.00013796572,0.0000022866413,0.000029246097,0.000020582655,0.0009215199],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99618757,0.00096728303,0.0023261707,0.00017710819,0.00015129434,0.00019056097],"domain_scores_gemma":[0.99653053,0.0003354334,0.0022941264,0.0002427463,0.0005349805,0.000062209445],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0036690836,0.00015011315,0.00065239024,0.00021824155,0.00003602982,0.000014000177,0.00026690686,0.00044347343,0.00007847953],"category_scores_gemma":[0.0013222862,0.00013348856,0.00019967827,0.00028378845,0.00029538502,0.00034041386,0.00006258747,0.0006447328,0.000045066918],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030001395,0.00020175282,0.037451204,0.000022738655,0.00006020605,0.0000013164514,0.00057142565,0.00033815892,0.9580501,0.00013645193,0.00050657283,0.0023601041],"study_design_scores_gemma":[0.003582226,0.0002186006,0.31360567,0.00012387453,0.00007836214,0.000012552967,0.00009788288,0.000031782485,0.679072,0.0013132957,0.0017564308,0.00010730344],"about_ca_topic_score_codex":0.00010755996,"about_ca_topic_score_gemma":0.000010056388,"teacher_disagreement_score":0.27897802,"about_ca_system_score_codex":0.00009085444,"about_ca_system_score_gemma":0.0003339801,"threshold_uncertainty_score":0.54435056},"labels":[],"label_agreement":null},{"id":"W2124176874","doi":"10.1172/jci64484","title":"Mutant huntingtin impairs immune cell migration in Huntington disease","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Genetic Neurodegenerative Diseases","field":"Neuroscience","cited_by":145,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute on Aging; National Institute of Neurological Disorders and Stroke; Medical Research Council; University of California, San Francisco; National Institutes of Health; Concordia University; University of Leicester; Multiple Sclerosis Society; Gladstone Institutes; National Institute on Drug Abuse; CHDI Foundation","keywords":"Huntingtin; Immune system; Microglia; Biology; Neurodegeneration; Mutant; Huntington's disease; Cell biology; Huntingtin Protein; Immunology; Inflammation; Disease; Genetics; Medicine; Pathology; Gene","score_opus":0.07844389210649401,"score_gpt":0.3546007779199818,"score_spread":0.2761568858134878,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2124176874","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99709815,0.0001261636,0.00011509512,0.0013067233,0.0010383427,0.00017373858,0.0000039684123,0.00001482154,0.0001230098],"genre_scores_gemma":[0.9973539,0.00009974049,0.0007055181,0.0010587069,0.0007052338,0.0000043798905,0.0000025805164,0.000020039997,0.000049894174],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9961199,0.0009884649,0.0018540141,0.00022058332,0.0005154982,0.00030154432],"domain_scores_gemma":[0.9967322,0.0009183955,0.0014545304,0.00020589396,0.0001455117,0.0005434671],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0020771828,0.00015518813,0.00033959045,0.0001808787,0.000070715236,0.000057541587,0.0002337889,0.000076540615,0.000040599218],"category_scores_gemma":[0.012573533,0.00013376518,0.0002444383,0.0003597533,0.00018937523,0.0006779183,0.000049916587,0.00043023948,0.000037777194],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008974568,0.00035473757,0.52924794,0.000019578349,0.0000017459254,0.0000051485404,0.00017053702,0.00036319427,0.46886092,0.00013444523,0.00013268937,0.0006193202],"study_design_scores_gemma":[0.0005292491,0.00009848518,0.48096794,0.00004743408,0.000024375115,0.0000021775202,0.000030915577,0.0005518929,0.51692754,0.00055699033,0.00017386151,0.00008916072],"about_ca_topic_score_codex":0.000008416458,"about_ca_topic_score_gemma":0.000004374891,"teacher_disagreement_score":0.048279982,"about_ca_system_score_codex":0.00003404536,"about_ca_system_score_gemma":0.00023909945,"threshold_uncertainty_score":0.995744},"labels":[],"label_agreement":null},{"id":"W2124330580","doi":"10.1172/jci32525","title":"Factor I is required for the development of membranoproliferative glomerulonephritis in factor H–deficient mice","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Complement system in diseases","field":"Immunology and Microbiology","cited_by":128,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Thomas Hospital","funders":"Imperial College London; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Wellcome Trust","keywords":"Complement factor B; Membranoproliferative glomerulonephritis; Alternative complement pathway; Complement system; Internal medicine; Endocrinology; Complement factor I; Factor H; Immunology; Biology; Glomerulonephritis; Chemistry; Kidney; Medicine; Antibody","score_opus":0.18347465497491608,"score_gpt":0.3869778507815383,"score_spread":0.2035031958066222,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2124330580","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958347,0.0013066703,0.00075457105,0.00079050125,0.0007940548,0.00043055118,0.00006744595,0.0000052808323,0.000016204698],"genre_scores_gemma":[0.9980595,0.000069571186,0.0013904264,0.00026533473,0.000075172975,0.000017039447,0.0000124942235,0.000007852029,0.000102607344],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99697787,0.00033260725,0.0022609895,0.00014440536,0.00012062425,0.00016351888],"domain_scores_gemma":[0.9962821,0.0018462387,0.0013203972,0.0001357098,0.0003716325,0.00004391113],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000912763,0.00011684183,0.00049004884,0.00010511796,0.00013321146,0.0000065324607,0.00023517414,0.00013652467,0.00016396337],"category_scores_gemma":[0.0015730754,0.00007882282,0.00021411198,0.00012988363,0.0003061812,0.00013316743,0.000037638205,0.00022559494,0.000014010881],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020220466,0.0010562378,0.6299125,0.0002794707,0.0012172407,0.0000080113305,0.024387268,0.00007898703,0.31005722,0.00044239327,0.010141644,0.02039696],"study_design_scores_gemma":[0.0039906395,0.0004787335,0.801186,0.00029060597,0.000053262338,0.00004159639,0.00065002404,0.000044425607,0.18555953,0.00038006986,0.007171754,0.00015330304],"about_ca_topic_score_codex":0.000009102785,"about_ca_topic_score_gemma":0.000031193846,"teacher_disagreement_score":0.17127354,"about_ca_system_score_codex":0.00004908866,"about_ca_system_score_gemma":0.0005392815,"threshold_uncertainty_score":0.32143015},"labels":[],"label_agreement":null},{"id":"W2125419124","doi":"10.1172/jci35874","title":"PMNs facilitate translocation of platelets across human and mouse epithelium and together alter fluid homeostasis via epithelial cell–expressed ecto-NTPDases","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Adenosine and Purinergic Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":90,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; National Institutes of Health","keywords":"Platelet; Intestinal epithelium; Epithelium; Cell biology; Proinflammatory cytokine; Secretion; Intestinal mucosa; Inflammation; Immunology; Biology; Homeostasis; Chemistry; Biochemistry; Medicine; Internal medicine","score_opus":0.059793345842946835,"score_gpt":0.3313944035846833,"score_spread":0.2716010577417365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2125419124","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99577546,0.0018284277,0.0019467206,0.00024849,0.0000690011,0.00008199167,0.000035789715,0.0000032876515,0.0000108417535],"genre_scores_gemma":[0.99654263,0.0017635461,0.0010504137,0.00019516618,0.0003056407,0.0000016158776,0.000023907454,0.000013774253,0.00010331132],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984438,0.00017673972,0.0009081399,0.0001817,0.0001608634,0.00012875497],"domain_scores_gemma":[0.99891335,0.00010316876,0.00050530117,0.00012618372,0.00020211902,0.00014990314],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006895844,0.0001250316,0.0003112466,0.000038870166,0.00009145933,0.000012277378,0.00008794632,0.00018067242,0.000008678854],"category_scores_gemma":[0.00019443482,0.00010428963,0.00011342685,0.000047655056,0.00035848166,0.000023746908,0.000027734402,0.00016054067,7.444468e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019055496,0.00007113154,0.008668116,0.00003794904,0.000053894542,0.0000073726937,0.0007567003,0.00015440723,0.9880549,0.0000035246135,0.0004760308,0.0015254328],"study_design_scores_gemma":[0.0016697448,0.00083874667,0.009148889,0.00004023976,0.000034625486,0.00006456625,0.00008535763,0.000102282815,0.9868704,0.0003396004,0.0006745371,0.00013098789],"about_ca_topic_score_codex":0.00003005381,"about_ca_topic_score_gemma":0.00000429246,"teacher_disagreement_score":0.00147919,"about_ca_system_score_codex":0.0000034727773,"about_ca_system_score_gemma":0.000058965874,"threshold_uncertainty_score":0.42528078},"labels":[],"label_agreement":null},{"id":"W2125727551","doi":"10.1172/jci44555","title":"Loss of Gata5 in mice leads to bicuspid aortic valve","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Congenital heart defects research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":183,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Université de Montréal","funders":"Canadian Institutes of Health Research; University of Ottawa; Heart and Stroke Foundation of Canada","keywords":"Bicuspid aortic valve; Cardiology; Medicine; Internal medicine; Aortic valve","score_opus":0.10822361581151572,"score_gpt":0.4072296386962687,"score_spread":0.299006022884753,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2125727551","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988131,0.0001469554,0.00013720931,0.00022716148,0.00017268628,0.00010709343,0.0000020586488,0.0000012623619,0.00039247522],"genre_scores_gemma":[0.99708146,0.00006794214,0.0022736534,0.00025833855,0.00021751347,0.0000017748558,0.0000029425562,0.000009384316,0.00008701616],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982754,0.00021846085,0.0010046356,0.00013668013,0.00022277221,0.00014204405],"domain_scores_gemma":[0.9988693,0.00010003356,0.00029969343,0.00015802307,0.00035082945,0.0002221148],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015437998,0.00007162444,0.0002461011,0.00011113359,0.00001135547,0.000006422487,0.00018759821,0.00014093045,0.000025919553],"category_scores_gemma":[0.0028511633,0.0000616349,0.00019466178,0.00018229816,0.00016870393,0.000011652158,0.000072498646,0.00023726017,0.000016710888],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004750301,0.00020655457,0.5523525,0.00004932223,0.000058203594,0.00001513158,0.00018512936,0.000022597842,0.43696174,0.00005779408,0.0008245277,0.008791474],"study_design_scores_gemma":[0.00084339106,0.0023160595,0.56295985,0.00010675209,0.000027962615,0.000031887394,0.00003412536,0.000057352965,0.43144238,0.001227293,0.00083785516,0.00011506799],"about_ca_topic_score_codex":0.000025240985,"about_ca_topic_score_gemma":0.000062046514,"teacher_disagreement_score":0.01060739,"about_ca_system_score_codex":0.00001094156,"about_ca_system_score_gemma":0.00023796473,"threshold_uncertainty_score":0.34133145},"labels":[],"label_agreement":null},{"id":"W2125733229","doi":"10.1172/jci41431","title":"Antiangiogenic cancer therapy combined with oncolytic virotherapy leads to regression of established tumors in mice","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":82,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Oncolytics Biotech (Canada)","funders":"National Cancer Institute; National Institutes of Health; Mayo Foundation for Medical Education and Research","keywords":"Oncolytic virus; Cancer research; Virotherapy; Melanoma; Cancer; Medicine; Viral replication; Immunology; Immune system; Biology; Virus; Internal medicine","score_opus":0.047727150588789465,"score_gpt":0.39777268982086483,"score_spread":0.3500455392320754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2125733229","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99764836,0.00031104122,0.000050544808,0.0014804902,0.00020355672,0.00027191555,0.0000034471886,0.000002659652,0.000027985428],"genre_scores_gemma":[0.99663246,0.00059360306,0.0014639469,0.00081657746,0.0003660056,0.000010067477,0.000006615896,0.000026145082,0.00008457146],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99802786,0.0002903833,0.0009348973,0.0002075312,0.0003583463,0.00018096445],"domain_scores_gemma":[0.99839926,0.00011149605,0.0006323878,0.00025106038,0.00038361803,0.00022217861],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018345253,0.0001385962,0.00039887623,0.0001612277,0.000027047894,0.000018539813,0.00030905852,0.00019377981,0.00004295411],"category_scores_gemma":[0.00042832462,0.0000941308,0.00014988585,0.00032927087,0.00022097398,0.000018094008,0.000023943341,0.00043095546,0.000001619905],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009763043,0.00015038384,0.1383273,0.0000074688774,0.0000479403,0.0000048354223,0.00006186741,0.00022314278,0.84378684,0.000004812144,0.00035433294,0.007268054],"study_design_scores_gemma":[0.0038363296,0.011376085,0.09252285,0.00015283965,0.000010325857,0.0000092228065,0.000020555119,0.00008394818,0.89117014,0.00014254256,0.00054848037,0.00012667096],"about_ca_topic_score_codex":0.000036546604,"about_ca_topic_score_gemma":0.0008256401,"teacher_disagreement_score":0.047383327,"about_ca_system_score_codex":0.00001549147,"about_ca_system_score_gemma":0.00072765705,"threshold_uncertainty_score":0.38385427},"labels":[],"label_agreement":null},{"id":"W2125774818","doi":"10.1172/jci38433","title":"Phosducin influences sympathetic activity and prevents stress-induced hypertension in humans and mice","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Renin-Angiotensin System Studies","field":"Medicine","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Julius-Maximilians-Universität Würzburg; Universidade do Porto; National Heart, Lung, and Blood Institute; Albert-Ludwigs-Universität Freiburg; Deutsches Krebsforschungszentrum; Deutsche Forschungsgemeinschaft; American Heart Association","keywords":"Blood pressure; Sympathetic nervous system; Endocrinology; Internal medicine; Allele; Stimulation; Phenotype; Medicine; Homeostasis; Catecholamine; Biology; Gene; Genetics","score_opus":0.11119545458172723,"score_gpt":0.3922332784606517,"score_spread":0.28103782387892445,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2125774818","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950748,0.0006068148,0.0000045429056,0.0039409376,0.0001532975,0.0001752788,5.548784e-7,0.0000062508325,0.00003753941],"genre_scores_gemma":[0.99824667,0.00037787302,0.0006234378,0.00051982515,0.0002078727,5.9121317e-7,4.552577e-7,0.0000056163294,0.00001763624],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99825895,0.00025120616,0.00091870694,0.00017296063,0.0002867327,0.00011147157],"domain_scores_gemma":[0.9985234,0.00036536378,0.00064014905,0.000103779894,0.000188515,0.00017879803],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013142502,0.00011110064,0.00061457185,0.00012364096,0.00004231581,0.00001939335,0.00004106176,0.00013478105,9.87737e-7],"category_scores_gemma":[0.0017956194,0.00007969085,0.00007697311,0.0001180474,0.00012992635,0.0002227452,0.00001949012,0.00035791637,8.661851e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015010842,0.00015498672,0.90447134,0.00002489376,0.000045176315,0.000058832542,0.0005599089,0.000004402678,0.0787254,0.000012449511,0.00007490331,0.015717588],"study_design_scores_gemma":[0.0016003482,0.0012077678,0.9886167,0.0011961707,0.000117128184,0.000111012494,0.000068222784,0.00016389659,0.005880381,0.000955049,0.000013588664,0.00006970154],"about_ca_topic_score_codex":0.000033206645,"about_ca_topic_score_gemma":0.000015681193,"teacher_disagreement_score":0.08414538,"about_ca_system_score_codex":0.0000243012,"about_ca_system_score_gemma":0.00008448071,"threshold_uncertainty_score":0.32496986},"labels":[],"label_agreement":null},{"id":"W2125864491","doi":"10.1172/jci15183","title":"Functional and clinical characterization of KCNJ2 mutations associated with LQT7 (Andersen syndrome)","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cardiac electrophysiology and arrhythmias","field":"Medicine","cited_by":539,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"National Center for Research Resources; National Institutes of Health; University of Rochester; National Heart, Lung, and Blood Institute; Muscular Dystrophy Association; Howard Hughes Medical Institute","keywords":"Afterdepolarization; Periodic paralysis; Long QT syndrome; Channelopathy; Internal medicine; Mutation; Medicine; Cardiac arrhythmia; Endocrinology; Myocyte; Cardiology; Biology; QT interval; Electrophysiology; Paralysis; Atrial fibrillation; Genetics; Repolarization; Surgery; Gene","score_opus":0.07382040307457637,"score_gpt":0.3337305183501474,"score_spread":0.259910115275571,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2125864491","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961234,0.000043221586,0.00038702114,0.0029321876,0.0002901886,0.00011692653,0.0000043521964,0.000009692994,0.00009305454],"genre_scores_gemma":[0.9981246,0.00021639492,0.00037206832,0.0005917785,0.00039996684,0.0000011679724,0.00005079085,0.000009851296,0.00023335253],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99791944,0.00029456956,0.0012951724,0.00013130816,0.00026271603,0.00009676916],"domain_scores_gemma":[0.99729884,0.00077502104,0.0011840963,0.00008970077,0.00046406378,0.00018825277],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010296777,0.00008834208,0.00057903334,0.00009559351,0.00005156317,0.000007658713,0.000026472113,0.00020742803,0.000089502435],"category_scores_gemma":[0.002238703,0.00006564053,0.00020924455,0.00019149041,0.00044708882,0.00019094981,0.000008923769,0.00050090783,0.0000059323934],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011559305,0.0009506082,0.96833354,0.000060844424,0.0017191778,0.0003396121,0.00018251545,0.00006844556,0.014958446,0.0005766063,0.0014328952,0.010221375],"study_design_scores_gemma":[0.0026755976,0.002249816,0.99167544,0.00020205762,0.00044820987,0.00070813444,0.000017275412,0.001144785,0.00023749095,0.0005090626,0.0000676551,0.00006446867],"about_ca_topic_score_codex":6.384933e-7,"about_ca_topic_score_gemma":0.0000012214656,"teacher_disagreement_score":0.023341903,"about_ca_system_score_codex":0.00001886141,"about_ca_system_score_gemma":0.00013044971,"threshold_uncertainty_score":0.2680098},"labels":[],"label_agreement":null},{"id":"W2126444826","doi":"10.1172/jci63818","title":"Taming endothelial activation with a microRNA","year":2012,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"Canadian Institutes of Health Research; Medical Research Council; Australian Government; National Health and Medical Research Council; Heart and Stroke Foundation of Canada","keywords":"Inflammation; microRNA; Regulator; Biology; Signal transduction; Sepsis; Cancer research; Immunology; Bioinformatics; Cell biology; Medicine; Genetics; Gene","score_opus":0.04569933733843147,"score_gpt":0.32376210688491885,"score_spread":0.2780627695464874,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2126444826","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.87291616,0.0004452158,0.004148417,0.1204804,0.0013097828,0.00036219388,0.000030737647,0.000011726847,0.00029533386],"genre_scores_gemma":[0.51530135,0.000215455,0.012854296,0.38758788,0.08141389,0.00001577296,0.001410507,0.00020414017,0.000996753],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9975033,0.00037221858,0.0012348595,0.0002399528,0.00043123573,0.00021845056],"domain_scores_gemma":[0.996366,0.00013122275,0.002582302,0.00028636423,0.0004815944,0.00015246634],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010032825,0.00023223067,0.00042280898,0.00010922236,0.000046855625,0.00004171905,0.0002279947,0.0009754237,0.000024385829],"category_scores_gemma":[0.00071271043,0.00018470825,0.00029784843,0.00008502164,0.00019945156,0.000025862584,0.000038992974,0.001097946,0.000010232219],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040770578,0.00007111231,0.005038482,0.00014536014,0.0004339218,0.000022027503,0.000055574004,0.000045436267,0.2912112,0.000009781791,0.6984486,0.004110809],"study_design_scores_gemma":[0.0014410798,0.0006354814,0.007952833,0.00042097495,0.00031879154,0.000121167504,0.000011970374,0.000017073615,0.11705327,0.00029300194,0.8713796,0.00035474208],"about_ca_topic_score_codex":0.0000034670325,"about_ca_topic_score_gemma":8.3475476e-7,"teacher_disagreement_score":0.35761487,"about_ca_system_score_codex":0.000041276995,"about_ca_system_score_gemma":0.0005172782,"threshold_uncertainty_score":0.75321835},"labels":[],"label_agreement":null},{"id":"W2126683943","doi":"10.1172/jci9896","title":"Persistence of platelet thrombus formation in arterioles of mice lacking both von Willebrand factor and fibrinogen","year":2000,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Platelet Disorders and Treatments","field":"Medicine","cited_by":489,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Heart, Lung, and Blood Institute; National Institutes of Health; Heart and Stroke Foundation of Canada; American Heart Association","keywords":"Platelet; Von Willebrand factor; Thrombus; Fibrinogen; Chemistry; Fibrin; Fibronectin; Intravital microscopy; Coagulation; ADAMTS13; Platelet adhesiveness; Immunology; Internal medicine; Pathology; Cell biology; Medicine; Microcirculation; Biology; Biochemistry; Platelet aggregation; Extracellular matrix","score_opus":0.0765742435641735,"score_gpt":0.33933451900716227,"score_spread":0.26276027544298874,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2126683943","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989704,0.00033329727,0.000014162213,0.00037795238,0.000035873083,0.00010417843,0.0000054660277,0.0000020491213,0.00015664952],"genre_scores_gemma":[0.99794143,0.0009194108,0.0009834737,0.00009579679,0.000032512857,2.8227646e-7,0.0000062465115,0.000004500972,0.000016338963],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99861634,0.0000638612,0.0009954207,0.0000720135,0.00017941894,0.00007297747],"domain_scores_gemma":[0.9990199,0.00015892176,0.00059948006,0.00005830181,0.000080045415,0.00008333848],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029856825,0.00006937381,0.0004637777,0.00007909956,0.000012601957,0.000005907704,0.00003481387,0.000087537795,0.00003774965],"category_scores_gemma":[0.00018962091,0.000052970132,0.000093036084,0.00008643215,0.00012088598,0.0002919382,0.0000052807254,0.00013312856,0.0000010140797],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013490597,0.00040904357,0.8397915,0.0003989098,0.00022421748,0.000112676134,0.0028383152,0.00015828932,0.05287941,0.000024662562,0.000117609736,0.101696335],"study_design_scores_gemma":[0.004432734,0.0011582804,0.96596646,0.00094641634,0.0000831691,0.00024265544,0.0002305323,0.0012407063,0.024606539,0.0009241239,0.00009944337,0.00006893203],"about_ca_topic_score_codex":0.000014378701,"about_ca_topic_score_gemma":0.000011767621,"teacher_disagreement_score":0.12617499,"about_ca_system_score_codex":0.000014679103,"about_ca_system_score_gemma":0.00005325935,"threshold_uncertainty_score":0.21600592},"labels":[],"label_agreement":null},{"id":"W2126743348","doi":"10.1172/jci42127","title":"PPARβ/δ affects pancreatic β cell mass and insulin secretion in mice","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Medical Research Council; Canadian Institutes of Health Research; Université de Lausanne; Islamic Development Bank; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; European Commission; Diabetes UK; Wellcome Trust; Canadian Diabetes Association; National Institutes of Health; National Science Foundation","keywords":"Internal medicine; Endocrinology; Biology; Insulin; Hyperinsulinemia; Pancreas; Insulin oscillation; Actin cytoskeleton; Pancreatic islets; Adipose tissue; Secretion; Cell biology; Insulin resistance; Islet; Cell; Cytoskeleton; Medicine; Biochemistry","score_opus":0.0576271465624357,"score_gpt":0.33994698657801886,"score_spread":0.2823198400155832,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2126743348","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99511373,0.0014385137,0.00019828655,0.0010003176,0.00045564232,0.0001317831,5.554297e-7,0.000008803308,0.0016523716],"genre_scores_gemma":[0.9922945,0.00047834258,0.0051757162,0.0012004697,0.0007019264,0.000002094704,0.000005353207,0.000009109401,0.00013250034],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99842197,0.00026339333,0.0008406774,0.00008897493,0.00023233419,0.00015265572],"domain_scores_gemma":[0.99800277,0.00087031274,0.00053484534,0.00007939025,0.00010216332,0.00041053296],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002341972,0.000090750036,0.00044690352,0.00013781298,0.000019840247,0.000012471593,0.000030618885,0.00015259605,0.000041193463],"category_scores_gemma":[0.0031466829,0.00007025975,0.000088340974,0.0001702247,0.00010125591,0.00028607028,0.000008929379,0.00037439016,0.000018848283],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022736055,0.00015133867,0.9620029,0.00011952496,0.000024566156,0.0000064375226,0.00017855206,0.0000061279916,0.034095682,0.00010676411,0.00074476004,0.0023360425],"study_design_scores_gemma":[0.0037137629,0.00066805957,0.9779963,0.00039252438,0.0001954902,0.000043811768,0.00014127753,0.0011114059,0.013666539,0.001156176,0.00082852674,0.00008613773],"about_ca_topic_score_codex":0.0000059145027,"about_ca_topic_score_gemma":6.5485034e-7,"teacher_disagreement_score":0.020429142,"about_ca_system_score_codex":0.000036068526,"about_ca_system_score_gemma":0.00011699812,"threshold_uncertainty_score":0.37671006},"labels":[],"label_agreement":null},{"id":"W2127605198","doi":"10.1172/jci28493","title":"Maternal exposure to polycyclic aromatic hydrocarbons diminishes murine ovarian reserve via induction of Harakiri","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Toxic Organic Pollutants Impact","field":"Environmental Science","cited_by":133,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Aryl hydrocarbon receptor; Offspring; Pregnancy; Biology; Ovary; Internal medicine; Lactation; Endocrinology; Ovarian follicle; Ovarian reserve; Andrology; Physiology; Medicine; Infertility; Gene; Genetics","score_opus":0.048406181321058346,"score_gpt":0.3314357817904268,"score_spread":0.2830296004693685,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2127605198","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944665,0.00001445929,0.0019990199,0.0021176483,0.0007922746,0.00013339512,0.000002549118,0.000014661467,0.000459479],"genre_scores_gemma":[0.98995036,0.0000075029893,0.008923403,0.00050104054,0.00048116694,4.7854485e-7,4.6237412e-7,0.000019531886,0.00011605619],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99636656,0.00021785662,0.0021802413,0.00019220865,0.0007693354,0.00027380485],"domain_scores_gemma":[0.9972963,0.00033939563,0.0014857929,0.00028380877,0.000004117106,0.0005905974],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00404153,0.00015177803,0.00043712923,0.00013679953,0.000053504395,0.000026010986,0.00036121093,0.0001875254,0.00015174701],"category_scores_gemma":[0.002368631,0.00012467576,0.0001625544,0.00044365958,0.00029807017,0.0005381668,0.00008482002,0.00043214476,0.000073944255],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003795385,0.00024379796,0.5778444,0.0000071770337,0.0000868292,0.000049012975,0.000742967,0.000060908667,0.33843747,0.000009106633,0.0006381626,0.08150068],"study_design_scores_gemma":[0.0006513112,0.00095124706,0.9173805,0.000093290255,0.00004680918,0.00013188297,0.000052913318,0.00009991393,0.0752961,0.0050495183,0.00013346315,0.00011305895],"about_ca_topic_score_codex":0.00015392977,"about_ca_topic_score_gemma":0.00013927004,"teacher_disagreement_score":0.33953613,"about_ca_system_score_codex":0.00012643827,"about_ca_system_score_gemma":0.000062898594,"threshold_uncertainty_score":0.50841296},"labels":[],"label_agreement":null},{"id":"W2127625135","doi":"10.1172/jci21689","title":"A role for proteinase-activated receptor–1 in inflammatory bowel diseases","year":2004,"lang":"en","type":"retraction","venue":"Journal of Clinical Investigation","topic":"Blood Coagulation and Thrombosis Mechanisms","field":"Medicine","cited_by":97,"is_retracted":true,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; Crohn's and Colitis Foundation of Canada; Canadian Association of Gastroenterology; Crohn's and Colitis Foundation; University of Calgary","keywords":"Inflammation; Colitis; Inflammatory bowel disease; Pathogenesis; Immunology; Thrombin; Receptor; Proinflammatory cytokine; Gastrointestinal tract; Medicine; Internal medicine; Disease; Platelet","score_opus":0.08037441316340546,"score_gpt":0.38139968582789585,"score_spread":0.3010252726644904,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2127625135","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9749899,0.0031974774,0.0009229407,0.0076287985,0.007780338,0.004553383,0.00010588527,0.00011489448,0.00070639036],"genre_scores_gemma":[0.9334091,0.0063062552,0.027368838,0.0040432196,0.021931618,0.00036113933,0.0020174226,0.00041508803,0.00414735],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9960327,0.00025642995,0.0025954826,0.00027030992,0.00064628763,0.00019877078],"domain_scores_gemma":[0.9953032,0.00044420513,0.0028797828,0.00021479913,0.00072841934,0.0004295634],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016306888,0.0002538628,0.0011031484,0.00044777256,0.000047920163,0.000042620122,0.0001166361,0.0009936349,0.00009523459],"category_scores_gemma":[0.0045002345,0.00021828916,0.0006094336,0.00022536202,0.000115016126,0.00032799877,0.000017253142,0.0013887094,0.000016527689],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.02841796,0.015508688,0.16869879,0.022135312,0.006418987,0.00039545618,0.0018811174,0.0015484493,0.302246,0.011365261,0.14929795,0.29208604],"study_design_scores_gemma":[0.045941908,0.013361401,0.4881634,0.039372392,0.0042903316,0.00024074034,0.00042908406,0.0017801501,0.06627751,0.08823848,0.250097,0.001807603],"about_ca_topic_score_codex":0.000012526543,"about_ca_topic_score_gemma":0.0000076070833,"teacher_disagreement_score":0.31946462,"about_ca_system_score_codex":0.00030866652,"about_ca_system_score_gemma":0.0025245107,"threshold_uncertainty_score":0.8901574},"labels":[],"label_agreement":null},{"id":"W2128006949","doi":"10.1172/jci23915","title":"Targeted inactivation of hepatic Abca1 causes profound hypoalphalipoproteinemia and kidney hypercatabolism of apoA-I","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cholesterol and Lipid Metabolism","field":"Medicine","cited_by":447,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; National Heart, Lung, and Blood Institute; Heart and Stroke Foundation of Canada; Killam Trusts; National Institutes of Health; Michael Smith Health Research BC; Wake Forest University","keywords":"ABCA1; Tangier disease; Catabolism; ATP Binding Cassette Transporter 1; Endocrinology; Internal medicine; Cholesterol; Apolipoprotein B; Kidney; Reverse cholesterol transport; Chemistry; Biology; Biochemistry; Lipoprotein; Metabolism; Medicine; Transporter","score_opus":0.05384288293225244,"score_gpt":0.3573616518087649,"score_spread":0.30351876887651247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2128006949","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99443924,0.00064212637,0.00015261958,0.0041017286,0.00031541963,0.00026657712,0.0000065698355,0.00000804499,0.000067681685],"genre_scores_gemma":[0.9864289,0.00047273777,0.01051447,0.0009874318,0.0014700852,0.0000028480347,0.0000151039685,0.000015578815,0.000092820825],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9970015,0.00017811426,0.002088353,0.00014240778,0.0004690746,0.00012053183],"domain_scores_gemma":[0.9967043,0.00027166528,0.0017796,0.00018939332,0.0006754705,0.0003795894],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015284223,0.00013203017,0.00082050957,0.00019242518,0.000025617735,0.000009378752,0.00007897905,0.00018442531,0.00003250664],"category_scores_gemma":[0.005831029,0.00010037396,0.00016097448,0.00022188344,0.00030832936,0.00041274616,0.00002467966,0.00041586545,0.0000017329189],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011179761,0.0007450988,0.300721,0.0007622626,0.00029707764,0.000006318639,0.0011288724,0.000034757362,0.63043463,0.0006295158,0.0022745049,0.061847996],"study_design_scores_gemma":[0.004387544,0.0006584393,0.7931388,0.00063451246,0.00042167315,0.000082411774,0.00007025417,0.0005089015,0.19188166,0.0011130034,0.006995696,0.00010712401],"about_ca_topic_score_codex":0.000046540954,"about_ca_topic_score_gemma":0.0000053228814,"teacher_disagreement_score":0.49241778,"about_ca_system_score_codex":0.00002441034,"about_ca_system_score_gemma":0.0004184696,"threshold_uncertainty_score":0.6980707},"labels":[],"label_agreement":null},{"id":"W2128242002","doi":"10.1172/jci34672","title":"VAMP8 is the v-SNARE that mediates basolateral exocytosis in a mouse model of alcoholic pancreatitis","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":95,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"National Institute on Alcohol Abuse and Alcoholism; University of Toronto; U.S. Army Medical Research Acquisition Activity; National Institutes of Health; King's College London","keywords":"Exocytosis; Cell biology; Secretion; Zymogen; Epithelial polarity; Acinar cell; Chemistry; Syntaxin; Biology; Internal medicine; Endocrinology; Biochemistry; Pancreas; Medicine; Cell; Enzyme","score_opus":0.16927549426415167,"score_gpt":0.3563864009225822,"score_spread":0.18711090665843055,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2128242002","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947982,0.00019077734,0.0000970944,0.0042405794,0.00015090265,0.00013737542,0.000009563406,0.000008906799,0.00036662543],"genre_scores_gemma":[0.99177086,0.001107248,0.0023434572,0.004055423,0.00025040514,0.00000456816,0.000005963217,0.000012721493,0.0004493448],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99772084,0.00019055863,0.0013554568,0.00012390675,0.00046401698,0.00014522583],"domain_scores_gemma":[0.99758667,0.0008894598,0.00081344467,0.00020321393,0.00028117688,0.00022604613],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011449517,0.000118729884,0.0006606812,0.00014719115,0.000044571407,0.000008668033,0.00011061646,0.00015626781,0.0000858152],"category_scores_gemma":[0.0025193375,0.000073103736,0.00028316193,0.00018600609,0.00032677388,0.00021835309,0.000020449424,0.00042197303,0.000007901428],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025083905,0.00014502055,0.9848681,0.000044007862,0.00010311879,0.000013016582,0.0011444596,0.0003770733,0.008941773,0.000058386893,0.0036196217,0.00043458655],"study_design_scores_gemma":[0.007707066,0.0012649641,0.7952322,0.00072458514,0.00039303635,0.00018133441,0.00030854924,0.0645904,0.12430457,0.0047402033,0.0003294096,0.00022371768],"about_ca_topic_score_codex":0.000044298115,"about_ca_topic_score_gemma":0.000004524887,"teacher_disagreement_score":0.18963593,"about_ca_system_score_codex":0.0000334229,"about_ca_system_score_gemma":0.0003390363,"threshold_uncertainty_score":0.30160642},"labels":[],"label_agreement":null},{"id":"W2128496826","doi":"10.1172/jci46088","title":"Growing a tumor stroma: a role for granulin and the bone marrow","year":2011,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Lung Cancer Treatments and Mutations","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Victoria Hospital; McGill University Health Centre","funders":"Astellas Foundation for Research on Metabolic Disorders; Japan Society for the Promotion of Science; Mochida Memorial Foundation for Medical and Pharmaceutical Research; Astellas Pharma; Canadian Cancer Society Research Institute; Canadian Institutes of Health Research; Uehara Memorial Foundation; Ichiro Kanehara Foundation for the Promotion of Medical Sciences and Medical Care; Suzuken Memorial Foundation","keywords":"Stromal cell; Bone marrow; Stroma; Cancer research; Haematopoiesis; Carcinogenesis; Tumor progression; Biology; Progenitor cell; Stem cell; Cancer; Immunology; Pathology; Medicine; Cell biology; Genetics; Immunohistochemistry","score_opus":0.06277724694104093,"score_gpt":0.3767053342269013,"score_spread":0.31392808728586036,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2128496826","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08029457,0.002410317,0.0003980668,0.9141546,0.0010734423,0.0010486232,0.000032166998,0.000014706124,0.0005735372],"genre_scores_gemma":[0.044995543,0.00045294064,0.014788793,0.9211544,0.016082976,0.00010120607,0.00015611618,0.00008181335,0.0021862164],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9978399,0.00019185884,0.0013525276,0.00016919765,0.00029663058,0.00014987773],"domain_scores_gemma":[0.99679977,0.0011310445,0.0014158814,0.00016461148,0.00034510213,0.00014357937],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013760941,0.00016348787,0.00082475046,0.00009463714,0.0000848732,0.000036183912,0.00008340157,0.00028439282,0.00001916987],"category_scores_gemma":[0.0011998463,0.000090575406,0.00047576413,0.0000646828,0.0003628397,0.00016437664,0.000012552984,0.0011900625,0.000002932354],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017935752,0.00012783073,0.0057640327,0.00045079718,0.0015356577,0.00036658047,0.0008458937,0.0000017137874,0.00008874638,0.0011645643,0.980159,0.007701601],"study_design_scores_gemma":[0.040009372,0.0035830936,0.015318721,0.0023274242,0.012056952,0.001476375,0.00025380062,0.00047100306,0.00015422158,0.15393206,0.7700284,0.0003885371],"about_ca_topic_score_codex":0.000028725724,"about_ca_topic_score_gemma":0.0000030105466,"teacher_disagreement_score":0.21013057,"about_ca_system_score_codex":0.0000392046,"about_ca_system_score_gemma":0.00044252613,"threshold_uncertainty_score":0.5170295},"labels":[],"label_agreement":null},{"id":"W2128575549","doi":"10.1172/jci65093","title":"Phenothiazines induce PP2A-mediated apoptosis in T cell acute lymphoblastic leukemia","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Phenothiazines and Benzothiazines Synthesis and Activities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":222,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency","funders":"National Cancer Institute","keywords":"Protein phosphatase 2; Apoptosis; Dephosphorylation; Cancer research; Cell culture; Leukemia; Chemistry; Pharmacology; Biology; Phosphatase; Phosphorylation; Biochemistry; Immunology","score_opus":0.02940821537407966,"score_gpt":0.29744031516085023,"score_spread":0.26803209978677056,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2128575549","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966608,0.00012070992,0.00081612583,0.0005801754,0.00067864056,0.0000652682,0.0000054776956,0.000006075065,0.0010666978],"genre_scores_gemma":[0.99482507,0.00023165841,0.0019313158,0.0010903322,0.0016521071,0.0000034849186,0.000021997963,0.000023066506,0.00022095315],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977222,0.00033553847,0.0012453953,0.0002331903,0.00025028377,0.00021340801],"domain_scores_gemma":[0.9981651,0.00037333998,0.0008679261,0.0002048808,0.00020029435,0.00018849986],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015228512,0.000184931,0.0004692465,0.00010612338,0.00005331931,0.000041146803,0.00024663314,0.00029683168,0.000013116474],"category_scores_gemma":[0.0022839943,0.00014672849,0.0002300887,0.00012699215,0.00015785871,0.000029667459,0.000055193388,0.00032628138,0.000012555251],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033850942,0.00026081022,0.03698498,0.000058142945,0.000106920255,0.0000046349605,0.000103967235,0.00038850482,0.94832015,0.00026698757,0.0053234217,0.00784295],"study_design_scores_gemma":[0.008907701,0.0034562845,0.1788937,0.000555134,0.0003842977,0.00009374747,0.00031404482,0.0047799917,0.7330643,0.0058581047,0.06250513,0.0011875457],"about_ca_topic_score_codex":0.000015813685,"about_ca_topic_score_gemma":0.000008445847,"teacher_disagreement_score":0.21525586,"about_ca_system_score_codex":0.000028062916,"about_ca_system_score_gemma":0.0003057871,"threshold_uncertainty_score":0.59834146},"labels":[],"label_agreement":null},{"id":"W2128877497","doi":"10.1172/jci41229","title":"Making the blastocyst: lessons from the mouse","year":2010,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":399,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"Canadian Institutes of Health Research; Hospital for Sick Children","keywords":"Epiblast; Blastocyst; Biology; Embryonic stem cell; Embryo; Inner cell mass; Embryogenesis; Endoderm; Cell biology; Genetics; Andrology; Gastrulation; Gene; Medicine","score_opus":0.25901900695470853,"score_gpt":0.4856474473016056,"score_spread":0.22662844034689705,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2128877497","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0033214856,0.9926796,0.00020916032,0.0024448538,0.0008047883,0.00036440388,0.00004167664,0.000003164139,0.00013088039],"genre_scores_gemma":[0.00040405671,0.9937707,0.0004972794,0.00055240496,0.0041996804,0.000010191829,0.00008354675,0.000037537342,0.00044459428],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9959627,0.0013712526,0.0017264809,0.0002604574,0.00048212803,0.00019701288],"domain_scores_gemma":[0.9956452,0.0011517777,0.0021472073,0.0006458766,0.0002643315,0.00014555524],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0039013897,0.00022380466,0.0008107087,0.0000373351,0.00014362052,0.00010505515,0.0011783029,0.0007103979,0.000020340101],"category_scores_gemma":[0.0041901204,0.00010463265,0.00093398645,0.00012436537,0.0004888483,0.00000708472,0.00024409796,0.0021539656,0.000036226636],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004657305,0.00006513852,0.00013635599,0.00032779205,0.000608686,0.000014285022,0.00003106177,0.0000104495375,0.0011827904,0.00008786146,0.0385759,0.9589131],"study_design_scores_gemma":[0.00018330902,0.000121420315,0.00009828082,0.0010371244,0.00035528227,0.000053476935,0.000010607566,0.0000122653755,0.00016785983,0.0002548403,0.9975885,0.00011701071],"about_ca_topic_score_codex":0.000006490116,"about_ca_topic_score_gemma":0.00002830266,"teacher_disagreement_score":0.9590126,"about_ca_system_score_codex":0.000016065385,"about_ca_system_score_gemma":0.00094625895,"threshold_uncertainty_score":0.9358028},"labels":[],"label_agreement":null},{"id":"W2128937433","doi":"10.1172/jci23203","title":"Gene therapy targeting survivin selectively induces pulmonary vascular apoptosis and reverses pulmonary arterial hypertension","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pulmonary Hypertension Research and Treatments","field":"Medicine","cited_by":365,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Fondation pour la Recherche Médicale; National Cancer Institute; National Institutes of Health; Bristol-Myers Squibb; University of Alberta; National Heart, Lung, and Blood Institute; Heart and Stroke Foundation of Canada","keywords":"Survivin; Apoptosis; Cancer research; Vascular smooth muscle; Inhibitor of apoptosis; Biology; Downregulation and upregulation; Mitochondrion; Chemistry; Endocrinology; Programmed cell death; Cell biology; Gene; Biochemistry","score_opus":0.09832385847673017,"score_gpt":0.3540108137765159,"score_spread":0.2556869552997857,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2128937433","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926481,0.0021695604,0.000017831875,0.0044396655,0.00031361665,0.00028087254,0.0000038839303,0.00002001729,0.00010639872],"genre_scores_gemma":[0.9840622,0.0063764295,0.006411451,0.001408492,0.001608014,0.000005006295,0.000028807637,0.000025665624,0.000073928844],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99700636,0.0005137372,0.0012164202,0.000303709,0.0006919524,0.00026779532],"domain_scores_gemma":[0.9974871,0.0005091718,0.0005837625,0.00016793566,0.0006606923,0.000591313],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019490386,0.00020480652,0.0007244928,0.00020013277,0.00014826369,0.000035288056,0.000097778546,0.00023158867,0.000050012688],"category_scores_gemma":[0.0016645761,0.00014397445,0.00027900288,0.00024144171,0.00022659737,0.00051777624,0.000044009368,0.00057423895,0.000014200549],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002487907,0.0018811193,0.1450338,0.000042679952,0.0006503475,0.0007362219,0.000060351565,0.000015571788,0.73311234,0.000006872816,0.002090199,0.11388261],"study_design_scores_gemma":[0.0050972058,0.002136972,0.8876816,0.00034899465,0.00031171893,0.0020424156,0.00014493182,0.0023403696,0.09378401,0.0008246462,0.0049896548,0.00029746708],"about_ca_topic_score_codex":0.000030842948,"about_ca_topic_score_gemma":7.5425544e-7,"teacher_disagreement_score":0.7426478,"about_ca_system_score_codex":0.000049737126,"about_ca_system_score_gemma":0.0003215347,"threshold_uncertainty_score":0.5871108},"labels":[],"label_agreement":null},{"id":"W2129163454","doi":"10.1172/jci37409","title":"Adenosine signaling contributes to ethanol-induced fatty liver in mice","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Adenosine and Purinergic Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":158,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Center for Research Resources; National Institute of General Medical Sciences; National Institute on Alcohol Abuse and Alcoholism; National Institutes of Health; School of Medicine, New York University; York University; Vilcek Foundation; Arthritis Foundation","keywords":"Adenosine; Adenosine receptor; Fatty liver; Steatosis; Endocrinology; Internal medicine; Purinergic signalling; Adenosine A1 receptor; Alcoholic fatty liver; Fatty acid metabolism; Biology; Adenosine A3 receptor; Fatty acid; Receptor; Biochemistry; Chemistry; Medicine; Agonist","score_opus":0.060226448269842615,"score_gpt":0.3559226718015311,"score_spread":0.29569622353168845,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2129163454","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99184954,0.0011120617,0.0034391524,0.0031765068,0.0002334122,0.00010223212,0.0000010833029,0.0000035873427,0.000082398685],"genre_scores_gemma":[0.9908402,0.00010234637,0.003571131,0.0044594132,0.0009643131,0.0000010285944,0.000008693125,0.000007996416,0.000044904056],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981314,0.00019270263,0.0011747375,0.00017392123,0.00016864704,0.00015861799],"domain_scores_gemma":[0.9988208,0.0001355162,0.00048089557,0.00010596195,0.00028365315,0.00017318662],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014579638,0.00011112979,0.0003037487,0.000104096835,0.000028842762,0.000024671957,0.00017612864,0.0002268159,0.000008253791],"category_scores_gemma":[0.001999476,0.00009755085,0.00013947404,0.00019285403,0.0000343003,0.000013732082,0.000025671694,0.00030197404,0.000005635516],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003398961,0.00010136761,0.024639213,0.000006509674,0.000036280773,0.000027517135,0.00007828419,0.00088972255,0.96552163,0.00007685495,0.0053463248,0.0029363802],"study_design_scores_gemma":[0.0020470838,0.0021597107,0.107593775,0.00026047134,0.000054888646,0.000035983372,0.000059963,0.00025502534,0.8832808,0.002036029,0.0019930196,0.00022326333],"about_ca_topic_score_codex":0.0000078338035,"about_ca_topic_score_gemma":0.0000021619155,"teacher_disagreement_score":0.08295456,"about_ca_system_score_codex":0.000014997062,"about_ca_system_score_gemma":0.00015162471,"threshold_uncertainty_score":0.39780083},"labels":[],"label_agreement":null},{"id":"W2129313145","doi":"10.1172/jci11918","title":"Hostile takeovers: viral appropriation of the NF-kB pathway","year":2001,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"NF-κB Signaling Pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":606,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital","funders":"National Cancer Institute; Fonds de Recherche du Québec - Santé; McGill University; Canadian Institutes of Health Research; Canadian Foundation for AIDS Research","keywords":"Appropriation; Virology; Cell biology; Biology; Philosophy; Linguistics","score_opus":0.12384618022445684,"score_gpt":0.38931465700665524,"score_spread":0.2654684767821984,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2129313145","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.015492647,0.9801081,0.00083196134,0.0001378554,0.0023982907,0.00055737095,0.00005493678,0.000006824871,0.00041203704],"genre_scores_gemma":[0.0029913352,0.99197316,0.0014234103,0.00022305414,0.0029116692,0.0000073006945,0.00010971985,0.00005042892,0.00030990748],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99558365,0.0008513812,0.0026617325,0.00027000037,0.0004705825,0.00016264242],"domain_scores_gemma":[0.993659,0.00023068019,0.0050843,0.00047431988,0.00040408847,0.00014758363],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002390907,0.00026249466,0.0011690009,0.000077975834,0.000050519746,0.000026467551,0.0005624889,0.00076474005,0.000014076124],"category_scores_gemma":[0.003910332,0.00016829117,0.001276446,0.0002332855,0.00027657804,0.000012664971,0.000113194714,0.00072348927,0.0000072015287],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010883493,0.00031400513,0.00094283535,0.0031921954,0.0007268687,0.000012886303,0.00006854749,0.00010856684,0.0076970523,0.00042780474,0.008100283,0.9783001],"study_design_scores_gemma":[0.00055276125,0.0006223435,0.00014744369,0.004331819,0.0005717878,0.00007742198,0.000010448475,0.000015878795,0.0051224544,0.00087771274,0.9874352,0.00023470794],"about_ca_topic_score_codex":0.000004076059,"about_ca_topic_score_gemma":0.0000029069802,"teacher_disagreement_score":0.97933495,"about_ca_system_score_codex":0.000034096804,"about_ca_system_score_gemma":0.0013023319,"threshold_uncertainty_score":0.6862714},"labels":[],"label_agreement":null},{"id":"W2129431737","doi":"10.1172/jci17912","title":"Dissection of experimental asthma with DNA microarray analysis identifies arginase in asthma pathogenesis","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Asthma and respiratory diseases","field":"Medicine","cited_by":458,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; American Heart Association","keywords":"Arginase; Pathogenesis; Asthma; Biology; Immunology; Activator (genetics); Gene expression; Arginine; Gene; Biochemistry; Amino acid","score_opus":0.03651366016870555,"score_gpt":0.3512952479161583,"score_spread":0.31478158774745274,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2129431737","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99834937,0.0006712751,0.00044858526,0.00015468089,0.00016446976,0.000115765324,0.0000029143796,0.0000056514195,0.000087289394],"genre_scores_gemma":[0.99811226,0.000034349363,0.0014686381,0.00015384662,0.00013873036,0.0000030446422,0.000007239907,0.0000120789655,0.00006980835],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9975051,0.0003800486,0.001406457,0.0001755389,0.00041105397,0.00012180152],"domain_scores_gemma":[0.9981233,0.0001434993,0.0009969473,0.00016744444,0.00029418652,0.0002746538],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011551053,0.00012691779,0.00065651065,0.00041155008,0.00003494131,0.000015854035,0.000059268383,0.00011627085,0.00007037886],"category_scores_gemma":[0.0008294311,0.00008972047,0.00039290584,0.00071953144,0.00021600648,0.00021695427,0.000007400421,0.0002165187,0.000002497355],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007382327,0.0007328517,0.8508081,0.00004629148,0.0003086161,0.00014298141,0.0002310508,0.0002704528,0.14537151,0.000051859217,0.000099646946,0.0011984038],"study_design_scores_gemma":[0.0018941014,0.0012179455,0.81066424,0.00019680372,0.00035662088,0.00007477397,0.0012314665,0.00008385623,0.18384145,0.000071875074,0.0002725745,0.000094286515],"about_ca_topic_score_codex":0.0000076049787,"about_ca_topic_score_gemma":0.000025262068,"teacher_disagreement_score":0.04014385,"about_ca_system_score_codex":0.000042902753,"about_ca_system_score_gemma":0.00030596124,"threshold_uncertainty_score":0.36586946},"labels":[],"label_agreement":null},{"id":"W2129997470","doi":"10.1172/jci59492","title":"T cell protein tyrosine phosphatase attenuates T cell signaling to maintain tolerance in mice","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Protein Tyrosine Phosphatases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":217,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Health and Medical Research Council","keywords":"Protein tyrosine phosphatase; Autoimmunity; T cell; Biology; CD8; Immunology; Proinflammatory cytokine; T-cell receptor; Autoimmune disease; Inflammation; Regulatory T cell; Signal transduction; Cell biology; IL-2 receptor; Antigen; Antibody; Immune system","score_opus":0.044221680769247707,"score_gpt":0.30684310555942107,"score_spread":0.26262142479017336,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2129997470","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992856,0.0040180217,0.0020889945,0.00037949436,0.00019825964,0.00035685452,0.00002262918,0.0000051768384,0.00007456243],"genre_scores_gemma":[0.9569792,0.000066764405,0.04115406,0.0012622705,0.00038680268,0.000015580417,0.00003506467,0.000022783863,0.00007746444],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99768186,0.000238632,0.0013399023,0.00028093572,0.00021973984,0.00023891864],"domain_scores_gemma":[0.9983698,0.000061749415,0.00079378387,0.00022456219,0.00025103588,0.00029906837],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017669122,0.0001704351,0.00033406966,0.00007932515,0.000034856264,0.000023735174,0.0003283547,0.00017814674,0.000026799615],"category_scores_gemma":[0.0011905055,0.00015715402,0.00013946182,0.00019696208,0.00011238553,0.000028044336,0.000086335334,0.00030879377,0.00002328025],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010830368,0.0004114917,0.025485922,0.00007755497,0.000019033041,0.00005873873,0.00011976056,0.00063415116,0.96686554,0.0003957392,0.0033666533,0.001482352],"study_design_scores_gemma":[0.0012641149,0.0010514411,0.00611859,0.00017086284,0.00001885704,0.0000070451697,0.000037484893,0.000062479165,0.9886149,0.0014571646,0.0010145691,0.00018247064],"about_ca_topic_score_codex":0.00005628407,"about_ca_topic_score_gemma":0.000014719093,"teacher_disagreement_score":0.039065067,"about_ca_system_score_codex":0.0000205617,"about_ca_system_score_gemma":0.00021605151,"threshold_uncertainty_score":0.6408555},"labels":[],"label_agreement":null},{"id":"W2130324831","doi":"10.1172/jci18648","title":"A role for surface lymphotoxin in experimental autoimmune encephalomyelitis independent of LIGHT","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs","funders":"Biogen","keywords":"Lymphotoxin; Experimental autoimmune encephalomyelitis; Pertussis toxin; Immunology; Multiple sclerosis; Biology; T cell; Receptor; Priming (agriculture); Pathogenesis; Bordetella pertussis; Myelin oligodendrocyte glycoprotein; Autoimmune disease; Immune system; Cell biology; Signal transduction; Antibody; G protein; Genetics","score_opus":0.034722802521450595,"score_gpt":0.313838066204831,"score_spread":0.2791152636833804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2130324831","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9921602,0.005739303,0.00005882154,0.00022596178,0.0012559154,0.00021299176,0.000004266715,0.000007352001,0.0003352143],"genre_scores_gemma":[0.9981896,0.00012879397,0.0010044579,0.00012771765,0.000039465198,0.000006053939,0.0000094759,0.000011715464,0.00048269038],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9969782,0.00063794805,0.001904045,0.00017846722,0.00006902566,0.00023229881],"domain_scores_gemma":[0.9978965,0.0005703455,0.0011418307,0.00016468957,0.0001857667,0.000040847353],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018749369,0.0001389948,0.00063869613,0.00011566151,0.000050592364,0.000007799047,0.00021741683,0.00043046655,0.0001951406],"category_scores_gemma":[0.0007999321,0.000118182885,0.00026139023,0.00013398525,0.00030908993,0.00016572526,0.000029110624,0.00040702862,0.000023166436],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003186552,0.00041986376,0.0140296165,0.000010950765,0.00009740476,0.000003878391,0.00049659895,0.00002932497,0.98214555,0.0014075652,0.00028689133,0.0007537142],"study_design_scores_gemma":[0.005385298,0.0011228225,0.023751205,0.00009288176,0.000032259864,0.00009160652,0.0007303887,0.000011841539,0.957167,0.0028839335,0.008610114,0.00012063123],"about_ca_topic_score_codex":0.000045989163,"about_ca_topic_score_gemma":0.000011336739,"teacher_disagreement_score":0.024978517,"about_ca_system_score_codex":0.00005444818,"about_ca_system_score_gemma":0.0003367004,"threshold_uncertainty_score":0.4819358},"labels":[],"label_agreement":null},{"id":"W2130827011","doi":"10.1172/jci16510","title":"Endothelium-derived Toll-like receptor-4 is the key molecule in LPS-induced neutrophil sequestration into lungs","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":406,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; Fondation pour la Recherche Médicale","keywords":"TLR4; Bone marrow; Intravital microscopy; Endothelium; Immunology; Lipopolysaccharide; Inflammation; Pulmonary sequestration; Microcirculation; Biology; Medicine; Pathology; Lung; Internal medicine; Endocrinology","score_opus":0.04664398978921872,"score_gpt":0.32455398685784503,"score_spread":0.2779099970686263,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2130827011","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9911478,0.0004654568,0.00015171478,0.006272324,0.001367304,0.00020488635,7.855264e-7,0.000012048581,0.00037764868],"genre_scores_gemma":[0.9969339,0.00034152475,0.00045986316,0.0018165341,0.00012423741,0.000006878229,0.000014279514,0.00001359188,0.00028923096],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9959199,0.0019301712,0.0016843929,0.00016796673,0.00010422617,0.0001933336],"domain_scores_gemma":[0.99778736,0.0006120307,0.0010647412,0.00022713821,0.00026447015,0.000044266464],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0030747706,0.00014988784,0.00037625115,0.00014131669,0.00012969357,0.000036024976,0.00021244588,0.00037243724,0.00016378552],"category_scores_gemma":[0.0021642514,0.00010656616,0.00020274142,0.00020757467,0.00021118428,0.0004005783,0.000018932598,0.0007953434,0.00015245262],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036840056,0.000068975634,0.0026542249,0.0000085698,0.00007768416,0.0000051236284,0.0013664439,0.00002191613,0.98979104,0.0017290058,0.0020326355,0.0018760067],"study_design_scores_gemma":[0.00240016,0.0007884945,0.018137991,0.00011846926,0.000056940542,0.00007931093,0.0003443254,0.000040136576,0.9525432,0.004692109,0.020629155,0.0001697365],"about_ca_topic_score_codex":0.000038818143,"about_ca_topic_score_gemma":0.000013127208,"teacher_disagreement_score":0.03724784,"about_ca_system_score_codex":0.00006681127,"about_ca_system_score_gemma":0.00043675408,"threshold_uncertainty_score":0.4345642},"labels":[],"label_agreement":null},{"id":"W2131276542","doi":"10.1172/jci15316","title":"Different mechanisms underlying the stimulation of KCa channels by nitric oxide and carbon monoxide","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Ion channel regulation and function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":100,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research; Heart and Stroke Foundation of Canada","keywords":"Nitric oxide; Chemistry; Biophysics; Stimulation; Protein subunit; Carbon monoxide; Agonist; Pharmacology; Nitric oxide synthase; Cell biology; Biochemistry; Internal medicine; Medicine; Biology; Receptor; Gene","score_opus":0.09247713089352295,"score_gpt":0.3271748391372642,"score_spread":0.23469770824374125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2131276542","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98612905,0.0003560353,0.012285522,0.0007040381,0.00037093993,0.00009702395,0.0000012825365,0.0000029020507,0.00005319868],"genre_scores_gemma":[0.9986838,0.000290985,0.00034320413,0.00024914645,0.00019662862,0.0000016719925,0.000009914683,0.000008767067,0.00021588722],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99867,0.000185737,0.0007440963,0.00011537965,0.00020498988,0.00007980346],"domain_scores_gemma":[0.99880993,0.00011392257,0.0007047331,0.000103757,0.00017702368,0.00009060043],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006631477,0.0000880298,0.00018744844,0.00005171387,0.00004948613,0.00001712034,0.00007205946,0.00015136792,0.000009702626],"category_scores_gemma":[0.0005230896,0.000059879458,0.00009795377,0.00008122931,0.00009263909,0.000011617525,0.00002239395,0.00014318421,4.5155068e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001706871,0.00013945805,0.012273931,0.000029031864,0.00012143391,7.955486e-7,0.00011806239,0.0038957153,0.9715412,0.00049161346,0.0028373024,0.008380724],"study_design_scores_gemma":[0.005077997,0.0025724417,0.22307825,0.0001982124,0.00031039675,0.00007275939,0.00047502306,0.35147086,0.39214256,0.021671245,0.0024257957,0.0005044407],"about_ca_topic_score_codex":0.0000054937063,"about_ca_topic_score_gemma":8.782965e-7,"teacher_disagreement_score":0.5793987,"about_ca_system_score_codex":0.000009253467,"about_ca_system_score_gemma":0.000016257327,"threshold_uncertainty_score":0.24418135},"labels":[],"label_agreement":null},{"id":"W2131374289","doi":"10.1172/jci15598","title":"Hypertension and prolonged vasoconstrictor signaling in RGS2-deficient mice","year":2003,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Renin-Angiotensin System Studies","field":"Medicine","cited_by":331,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Amgen (Canada)","funders":"American Heart Association; National Institutes of Health; National Science Foundation","keywords":"RGS2; Heterotrimeric G protein; G protein; G protein-coupled receptor; Receptor; Regulator of G protein signaling; Endocrinology; Internal medicine; Signal transduction; Agonist; Gq alpha subunit; Biology; Blood pressure; Cell biology; GTPase-activating protein; Medicine","score_opus":0.13009429383575546,"score_gpt":0.3557628744495192,"score_spread":0.22566858061376374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2131374289","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7024287,0.0021698726,0.000022286671,0.29358137,0.0012179748,0.000466855,0.000002247757,0.000010837248,0.00009986148],"genre_scores_gemma":[0.38028967,0.0008959639,0.01084073,0.5992287,0.008177419,0.000011178222,0.000031742817,0.00010129851,0.00042333026],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99466044,0.0008055151,0.0030703926,0.0003632541,0.0008242634,0.00027615018],"domain_scores_gemma":[0.99449915,0.0017602142,0.0024102114,0.00021840942,0.0009118225,0.000200174],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0033195547,0.00030028346,0.0017921989,0.0004313814,0.00005489707,0.000038385067,0.000097358854,0.001108987,0.000007688462],"category_scores_gemma":[0.0066568656,0.00022029079,0.00038276086,0.00030349413,0.00035713887,0.00011158992,0.000038130343,0.0031918385,0.000009014522],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019327815,0.00012152734,0.27763605,0.00028356403,0.00042646524,0.002437566,0.00025345414,0.00001588089,0.0030585462,0.000005426311,0.7139531,0.0016151415],"study_design_scores_gemma":[0.018838212,0.005594517,0.54851896,0.018953122,0.0046887207,0.010992982,0.00033884385,0.0007017514,0.002621774,0.0015240504,0.3856823,0.0015447338],"about_ca_topic_score_codex":0.0000134192205,"about_ca_topic_score_gemma":0.000002142127,"teacher_disagreement_score":0.32827076,"about_ca_system_score_codex":0.00010867362,"about_ca_system_score_gemma":0.0005112855,"threshold_uncertainty_score":0.99910784},"labels":[],"label_agreement":null},{"id":"W2131549241","doi":"10.1172/jci18114","title":"The Fgl2/fibroleukin prothrombinase contributes to immunologically mediated thrombosis in experimental and human viral hepatitis","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":177,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; McMaster University; University Health Network; University of Toronto; Hamilton Health Sciences; St. Michael's Hospital; Canada Research Chairs","funders":"Canadian Institutes of Health Research; National Natural Science Foundation of China; Heart and Stroke Foundation of Canada","keywords":"Prothrombinase; Viral hepatitis; Fibrin; Virology; Immunology; Mouse hepatitis virus; Hepatitis; Medicine; Biology; Thrombin; Pathology; Platelet","score_opus":0.07351546400952162,"score_gpt":0.3931727325082992,"score_spread":0.31965726849877757,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2131549241","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99320096,0.00093343464,0.000030633808,0.00485826,0.00022516726,0.0004903833,0.0000018524446,0.0000119101915,0.00024741297],"genre_scores_gemma":[0.9968596,0.00044218428,0.0010633811,0.0014834084,0.00007684893,0.00002935069,0.000002672833,0.000011827919,0.000030687952],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997166,0.00054968084,0.0015871802,0.00017023119,0.00031265122,0.00021427726],"domain_scores_gemma":[0.9979332,0.0009410717,0.0005058643,0.00014417725,0.0002673973,0.00020827893],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0023914976,0.00013902337,0.0006346703,0.0001027973,0.00017065488,0.00004649696,0.00009303667,0.00014862003,0.00002028344],"category_scores_gemma":[0.010088957,0.000088896915,0.00011433334,0.0002098262,0.00054156897,0.00014582422,0.00004617879,0.0004721723,0.000009353784],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013108508,0.0002169,0.93814063,0.000009169822,0.00011577244,0.000027120752,0.00025443497,0.0000011759633,0.056145277,0.003735981,0.00086669705,0.00035573056],"study_design_scores_gemma":[0.0029070494,0.002579493,0.9668067,0.00025601,0.000049109585,0.000019185154,0.0001594322,0.000022366714,0.021087827,0.0044862772,0.0015332039,0.00009335461],"about_ca_topic_score_codex":0.00021514532,"about_ca_topic_score_gemma":0.0002939566,"teacher_disagreement_score":0.03505745,"about_ca_system_score_codex":0.000109124274,"about_ca_system_score_gemma":0.00017465206,"threshold_uncertainty_score":0.9982495},"labels":[],"label_agreement":null},{"id":"W2131809876","doi":"10.1172/jci75199","title":"Leiomodin-3 dysfunction results in thin filament disorganization and nemaline myopathy","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cardiomyopathy and Myosin Studies","field":"Medicine","cited_by":204,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of General Medical Sciences; National Human Genome Research Institute; National Institute on Aging; National Health and Medical Research Council; National Institutes of Health; Fondation pour la Recherche Médicale; Ministero della Salute; Murdoch Children's Research Institute; University of Pennsylvania; Schlumberger Foundation; Muscular Dystrophy Association; Eunice Kennedy Shriver National Institute of Child Health and Human Development; Broad Institute; National Institute of Arthritis and Musculoskeletal and Skin Diseases; Medical Research Council; Ospedale Pediatrico Bambino Gesù; Children’s Hospital of Wisconsin Research Institute; Great Ormond Street Hospital for Children","keywords":"Nemaline myopathy; Nebulin; Skeletal muscle; Congenital myopathy; Actin; Biology; Sanger sequencing; Zebrafish; Myopathy; Phenotype; Gene; Gene knockdown; Collagen VI; Mutation; Genetics; Molecular biology; Cell biology; Myocyte; Sarcomere; Pathology; Muscle biopsy; Anatomy; Medicine; Titin; Biopsy","score_opus":0.054864190663771004,"score_gpt":0.34971987652207476,"score_spread":0.29485568585830374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2131809876","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9875548,0.0002596084,0.0029767533,0.007917452,0.0006443334,0.00013324364,0.0000017361522,0.000011790571,0.000500277],"genre_scores_gemma":[0.9959504,0.00048493876,0.0016098083,0.00084451266,0.0009878244,0.0000012803345,0.000010839278,0.00000932508,0.000101058286],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978461,0.00024169669,0.001382398,0.00015029554,0.0002841077,0.00009536195],"domain_scores_gemma":[0.9983512,0.00043364827,0.00065445935,0.00011501268,0.00029203936,0.00015362586],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0035752626,0.00009375159,0.00047416665,0.0001346474,0.000042030315,0.000018750685,0.000033159653,0.000116304975,0.0000042088914],"category_scores_gemma":[0.0071096015,0.00007183203,0.000097664466,0.00022041825,0.00012428421,0.000180848,0.000021274984,0.0003245763,0.0000036474635],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002901653,0.0004029815,0.9209572,0.0001655749,0.0001314812,0.000038019567,0.0019668045,0.0004993741,0.008613092,0.0014951633,0.006771138,0.056057513],"study_design_scores_gemma":[0.0060159345,0.001499144,0.98064,0.00040794857,0.0001662701,0.00010426743,0.00029238575,0.0015822265,0.0012202138,0.003037798,0.0049377964,0.00009600334],"about_ca_topic_score_codex":0.000010537651,"about_ca_topic_score_gemma":0.000009193787,"teacher_disagreement_score":0.059682805,"about_ca_system_score_codex":0.000036470807,"about_ca_system_score_gemma":0.000073944735,"threshold_uncertainty_score":0.85113704},"labels":[],"label_agreement":null},{"id":"W2131897198","doi":"10.1172/jci69073","title":"Endothelial HIF-2 mediates protection and recovery from ischemic kidney injury","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cancer, Hypoxia, and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":195,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Cancer Research","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institutes of Health; Vanderbilt University; Amgen; American Heart Association","keywords":"Kidney; Hypoxia (environmental); Inflammation; Fibrosis; Ischemia; Acute kidney injury; Endothelial stem cell; Medicine; Reperfusion injury; Kidney disease; Renal ischemia; Biology; Pharmacology; Immunology; Cancer research; Endocrinology; Pathology; Internal medicine; Chemistry; Biochemistry","score_opus":0.028038415819643007,"score_gpt":0.30630144430687034,"score_spread":0.27826302848722734,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2131897198","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99410754,0.0005175337,0.0014676269,0.0009505432,0.0027079696,0.000082181126,0.000022009921,0.0000043989235,0.00014018884],"genre_scores_gemma":[0.97267216,0.003110223,0.0031592438,0.0024489395,0.018324122,0.0000055622227,0.000049039543,0.000019878453,0.00021082482],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987279,0.00018865145,0.00067163754,0.00016814543,0.00014913079,0.00009451134],"domain_scores_gemma":[0.99882656,0.00006433163,0.0005902486,0.00012659749,0.00014077584,0.0002514844],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009970315,0.00009381762,0.0002447389,0.00003780702,0.0000379288,0.000025337786,0.000086977045,0.00021931491,0.00001321856],"category_scores_gemma":[0.003864287,0.00007943555,0.00012610081,0.00004390686,0.00013037678,0.000018735871,0.0000311786,0.00023757669,0.0000037356867],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003503766,0.000026980848,0.0042679394,0.0000104143555,0.000062190484,1.719061e-7,0.000023559527,0.000004324308,0.9174434,0.000017098342,0.018292041,0.059501536],"study_design_scores_gemma":[0.001733099,0.0008806027,0.02230203,0.00007583562,0.00010482005,0.000016326345,0.0000108656595,0.00012885162,0.4615511,0.005608446,0.50741714,0.00017087735],"about_ca_topic_score_codex":0.00002759808,"about_ca_topic_score_gemma":0.0000060336965,"teacher_disagreement_score":0.48912513,"about_ca_system_score_codex":0.0000061812566,"about_ca_system_score_gemma":0.0001841748,"threshold_uncertainty_score":0.46261916},"labels":[],"label_agreement":null},{"id":"W2132525699","doi":"10.1172/jci23219","title":"Effects of the PPARγ agonist pioglitazone on lipoprotein metabolism in patients with type 2 diabetes mellitus","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Peroxisome Proliferator-Activated Receptors","field":"Biochemistry, Genetics and Molecular Biology","cited_by":177,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute","funders":"National Center for Research Resources; National Heart, Lung, and Blood Institute; National Institutes of Health; Deutsches Krebsforschungszentrum; Takeda Pharmaceuticals North America","keywords":"Very low-density lipoprotein; Endocrinology; Lipolysis; Internal medicine; Lipoprotein lipase; Pioglitazone; Chemistry; Apolipoprotein B; Lipoprotein; Diabetes mellitus; Adipose tissue; Medicine; Type 2 diabetes; Cholesterol","score_opus":0.011448691505976404,"score_gpt":0.26987557982307353,"score_spread":0.25842688831709715,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2132525699","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985343,0.00053137896,0.000007583262,0.00036554525,0.00033248076,0.00019640826,0.0000017753108,0.0000018212062,0.000028707635],"genre_scores_gemma":[0.9982334,0.000099994955,0.0007492201,0.00045731457,0.000418729,0.0000031925815,0.000005856843,0.000013275149,0.00001904486],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984248,0.0003214086,0.0007129114,0.00013750975,0.0002775708,0.00012577989],"domain_scores_gemma":[0.99868,0.0000952079,0.00069928804,0.00017087822,0.00025456134,0.000100047466],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00059183047,0.000112052614,0.0002908808,0.000049687103,0.000027565498,0.000010728808,0.000181733,0.00017232048,0.0000037811872],"category_scores_gemma":[0.0015500018,0.00006674485,0.00010863241,0.00017333167,0.00018249823,0.000015013274,0.00003315411,0.0003161634,0.0000022983168],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014289527,0.0010580459,0.5056158,0.00007692954,0.0002860849,8.960613e-7,0.000094268835,0.00067094096,0.46778145,0.000077032586,0.0007485003,0.02216113],"study_design_scores_gemma":[0.0013829264,0.00084688293,0.31084415,0.000102150014,0.000029196597,2.3730904e-7,0.0000024502813,0.00001174241,0.6851814,0.000096363794,0.001438539,0.00006393643],"about_ca_topic_score_codex":0.0000028549227,"about_ca_topic_score_gemma":0.0000047889866,"teacher_disagreement_score":0.21739995,"about_ca_system_score_codex":0.000018341643,"about_ca_system_score_gemma":0.00015473286,"threshold_uncertainty_score":0.2721776},"labels":[],"label_agreement":null},{"id":"W2132585563","doi":"10.1172/jci30982","title":"Prenatal dexamethasone exposure induces changes in nonhuman primate offspring cardiometabolic and hypothalamic-pituitary-adrenal axis function","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Birth, Development, and Health","field":"Medicine","cited_by":241,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Douglas Mental Health University Institute","funders":"Wellcome Trust","keywords":"Offspring; Dexamethasone; Endocrinology; Primate; Adrenal function; Internal medicine; Hypothalamic–pituitary–gonadal axis; Hypothalamic–pituitary–adrenal axis; Nonhuman primate; Prenatal exposure; Function (biology); Medicine; Biology; Neuroscience; Pregnancy; Hormone; Luteinizing hormone; Genetics","score_opus":0.08850697169696502,"score_gpt":0.36930603912054266,"score_spread":0.28079906742357763,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2132585563","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958117,0.0011755682,0.00035148315,0.0014023976,0.00068996276,0.00022925802,0.000001631686,0.000016872418,0.0003211233],"genre_scores_gemma":[0.9853617,0.0061769835,0.006229074,0.00094647665,0.001245851,0.0000023428936,0.0000082354345,0.000018031973,0.00001133749],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9972942,0.00017347927,0.0015286236,0.00022665439,0.0004885001,0.00028853831],"domain_scores_gemma":[0.99798584,0.00034817195,0.0008654612,0.000134119,0.00024654472,0.0004198584],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.006179256,0.00015882672,0.0007204352,0.0005214815,0.00006902412,0.000025006637,0.00007419775,0.00026699848,0.000015435195],"category_scores_gemma":[0.001112259,0.00013100554,0.00010553808,0.00034325308,0.00017052068,0.00029735867,0.00003519145,0.0008671659,0.0000032021112],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006841533,0.00016795698,0.89430976,0.0003514958,0.00016397036,0.000105268584,0.0009796183,0.000005630889,0.008515935,0.0017073025,0.00006321945,0.092945695],"study_design_scores_gemma":[0.0027651018,0.0008553336,0.9782163,0.0005456742,0.000114915485,0.00022181809,0.00021930684,0.000036667898,0.012135259,0.004638746,0.00013165479,0.00011922895],"about_ca_topic_score_codex":0.00004290376,"about_ca_topic_score_gemma":0.00019664408,"teacher_disagreement_score":0.09282646,"about_ca_system_score_codex":0.00008004693,"about_ca_system_score_gemma":0.00035942395,"threshold_uncertainty_score":0.5342251},"labels":[],"label_agreement":null},{"id":"W2132619856","doi":"10.1172/jci27414","title":"Nephrin ectodomain engagement results in Src kinase activation, nephrin phosphorylation, Nck recruitment, and actin polymerization","year":2006,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Renal Diseases and Glomerulopathies","field":"Medicine","cited_by":349,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical School, University of Michigan; College of Pharmacy, University of Michigan; National Institutes of Health; Karolinska Institutet; Universität Heidelberg; McGill University; University of Michigan; U.S. Department of Veterans Affairs","keywords":"Nephrin; Slit diaphragm; Cell biology; Podocyte; FYN; Phosphorylation; Ectodomain; Proto-oncogene tyrosine-protein kinase Src; Src family kinase; Biology; Tyrosine phosphorylation; Actin cytoskeleton; Chemistry; Cytoskeleton; Biochemistry; Receptor; Cell","score_opus":0.09757226290251139,"score_gpt":0.37567248495538585,"score_spread":0.27810022205287444,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2132619856","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9917688,0.0003852801,0.00053269305,0.0061650868,0.00019755252,0.00044768458,0.0000062133195,0.000015790414,0.0004809153],"genre_scores_gemma":[0.9950347,0.00052603945,0.0026449233,0.00084693293,0.00063552475,0.000010381241,0.00007615391,0.000016520418,0.00020880776],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99674106,0.00041697337,0.0020147637,0.0002247569,0.00043873725,0.00016369885],"domain_scores_gemma":[0.9975076,0.00056006387,0.0012716011,0.00016269567,0.00026550377,0.00023255609],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019527214,0.00015384023,0.00043327897,0.00025963126,0.00007608697,0.000049429265,0.00005679324,0.00014253813,0.000023747152],"category_scores_gemma":[0.0029590009,0.00012915516,0.0001315927,0.0004118109,0.00013708425,0.00041677742,0.00002497469,0.00042049098,0.000003890215],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006188548,0.0011096091,0.8412286,0.00024387173,0.00014246265,0.00012660648,0.0006583669,0.0010615246,0.057388928,0.0028235922,0.008917585,0.08011029],"study_design_scores_gemma":[0.0051026302,0.0006224157,0.96772796,0.00048487884,0.00008454262,0.000020563233,0.00014937572,0.00064023194,0.014446315,0.00508789,0.005502546,0.00013065533],"about_ca_topic_score_codex":0.0001291276,"about_ca_topic_score_gemma":0.000026388743,"teacher_disagreement_score":0.12649934,"about_ca_system_score_codex":0.00007996598,"about_ca_system_score_gemma":0.00026229385,"threshold_uncertainty_score":0.52667946},"labels":[],"label_agreement":null},{"id":"W2133227855","doi":"10.1172/jci19504","title":"Mammary-specific deletion of parathyroid hormone–related protein preserves bone mass during lactation","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Bone health and treatments","field":"Medicine","cited_by":155,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Cancer Institute; National Institutes of Health; National Institute of Arthritis and Musculoskeletal and Skin Diseases; Yale University","keywords":"Lactation; Endocrinology; Internal medicine; Parathyroid hormone-related protein; Mammary gland; Bone resorption; Bone remodeling; Offspring; Parathyroid hormone; Biology; Genetically modified mouse; Transgene; Calcium; Pregnancy; Medicine; Gene; Cancer","score_opus":0.06999822060789593,"score_gpt":0.35805086183207524,"score_spread":0.2880526412241793,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2133227855","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99537206,0.0016520356,0.00050652557,0.0015552299,0.00012819844,0.00042565458,0.0000013884595,0.000014493944,0.0003444146],"genre_scores_gemma":[0.9860007,0.00065628823,0.01278884,0.00007471187,0.00008021647,0.000007736877,0.000013536951,0.000014379022,0.00036359753],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99679875,0.00038406922,0.0020731864,0.00014936006,0.00043352926,0.00016112356],"domain_scores_gemma":[0.9972668,0.00014845292,0.0016161434,0.00017652502,0.00044411665,0.00034791828],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014692401,0.000117870135,0.0005086534,0.00014954574,0.00005217227,0.000013517783,0.00005172918,0.00022010897,0.000017989154],"category_scores_gemma":[0.0014394172,0.00009529176,0.00019555016,0.000247862,0.00009818758,0.00036485493,0.0000065098548,0.00044303742,0.000011424543],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0049851756,0.0018722423,0.2327278,0.00059288647,0.00059578504,0.00038553294,0.0005468456,0.00017717486,0.7407949,0.0077580973,0.0021136135,0.0074499636],"study_design_scores_gemma":[0.008639498,0.0024124153,0.9241101,0.00035899068,0.00013477523,0.00018914102,0.00003988397,0.00021506172,0.050938964,0.012111586,0.0007361199,0.00011342978],"about_ca_topic_score_codex":0.0000066666694,"about_ca_topic_score_gemma":0.000001322643,"teacher_disagreement_score":0.69138235,"about_ca_system_score_codex":0.00006068297,"about_ca_system_score_gemma":0.00031517938,"threshold_uncertainty_score":0.38858852},"labels":[],"label_agreement":null},{"id":"W2133234260","doi":"10.1172/jci38924","title":"The unique hypusine modification of eIF5A promotes islet β cell inflammation and dysfunction in mice","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Polyamine Metabolism and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":169,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Allergy and Infectious Diseases; National Institutes of Health; School of Medicine, Indiana University; Ball Brothers Foundation","keywords":"Islet; Proinflammatory cytokine; Streptozotocin; Beta cell; Biology; Inflammation; Messenger RNA; Gene knockdown; Endocrinology; Internal medicine; Diabetes mellitus; Immunology; Biochemistry; Medicine; Apoptosis; Gene","score_opus":0.028626875519798648,"score_gpt":0.3208163572318547,"score_spread":0.29218948171205605,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2133234260","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963397,0.00014905538,0.0013890361,0.001713118,0.00018201843,0.00012801637,0.0000022105226,0.000001602542,0.00009527398],"genre_scores_gemma":[0.9964911,0.00041220186,0.0025085302,0.000048548485,0.00044412498,0.000005526503,0.000019654462,0.0000054082957,0.00006492172],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988507,0.00011624386,0.0007773703,0.000094178766,0.00009972897,0.00006178471],"domain_scores_gemma":[0.9986987,0.00012024993,0.0007530884,0.00013551072,0.00023737754,0.000055039727],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014635931,0.000058330592,0.00012429763,0.00004181856,0.000041856423,0.00001589905,0.000100315025,0.00013267995,0.0000011350434],"category_scores_gemma":[0.0011200088,0.000042114247,0.000044396227,0.00009904936,0.0001741385,0.000018019246,0.000021016422,0.00022005389,6.216682e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006180092,0.000034253277,0.007166134,0.000009416118,0.000005651319,7.7780165e-8,0.000027544354,0.00002386539,0.9813879,0.0007055545,0.00013584374,0.010441944],"study_design_scores_gemma":[0.0010550513,0.00015702398,0.13190776,0.00001496472,0.000025401592,0.000008010455,0.000030872732,0.0009452099,0.854672,0.0053513674,0.0057705934,0.00006169456],"about_ca_topic_score_codex":0.0000113518445,"about_ca_topic_score_gemma":0.00004203489,"teacher_disagreement_score":0.12671587,"about_ca_system_score_codex":0.0000024133044,"about_ca_system_score_gemma":0.000100721605,"threshold_uncertainty_score":0.17173691},"labels":[],"label_agreement":null},{"id":"W2133742666","doi":"10.1172/jci40778","title":"Shank-interacting protein–like 1 promotes tumorigenesis via PTEN inhibition in human tumor cells","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"PI3K/AKT/mTOR signaling in cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":98,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Joseph's Hospital; McMaster University","funders":"Prostate Cancer Canada; Cancer Research Society","keywords":"PTEN; Tensin; Carcinogenesis; DU145; Cancer research; Biology; Gene knockdown; PI3K/AKT/mTOR pathway; Chemistry; Cancer cell; Cancer; Cell culture; Cell biology; Signal transduction; LNCaP; Genetics","score_opus":0.036079553736025366,"score_gpt":0.3528210182621844,"score_spread":0.31674146452615903,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2133742666","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99777526,0.00004093134,0.00045327636,0.0003380398,0.0010907926,0.00021483353,0.000004144721,0.000007429976,0.000075297394],"genre_scores_gemma":[0.99319744,0.0000057313055,0.0044289506,0.0003835965,0.001867249,0.000012220792,0.000022316955,0.000022611921,0.000059855116],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976276,0.00022664726,0.0014152797,0.00026653986,0.0002702632,0.00019367656],"domain_scores_gemma":[0.9979089,0.00009479899,0.0012655057,0.000213518,0.00033654392,0.00018075446],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002156176,0.00015329443,0.00031159807,0.00010099884,0.0000641844,0.000045964767,0.00016328672,0.00022628818,0.00004214288],"category_scores_gemma":[0.0013520932,0.00013977499,0.00019068488,0.00012398785,0.00016076324,0.000034211953,0.00005459205,0.00071220804,0.0000066531634],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000081954604,0.00010208818,0.010244365,0.000025453792,0.000022581873,0.000023662731,0.00004106204,0.000062486724,0.9875342,0.000014616387,0.00032750063,0.0015200055],"study_design_scores_gemma":[0.00079744385,0.00063045684,0.0060876375,0.00021268197,0.00002344086,0.000059442464,0.000019692512,0.0003460206,0.98867995,0.001382222,0.0015926363,0.0001683822],"about_ca_topic_score_codex":0.000025213789,"about_ca_topic_score_gemma":0.000090303714,"teacher_disagreement_score":0.0045777867,"about_ca_system_score_codex":0.000025080099,"about_ca_system_score_gemma":0.00023224269,"threshold_uncertainty_score":0.56998587},"labels":[],"label_agreement":null},{"id":"W2134179936","doi":"10.1172/jci59176","title":"Hypoxic pulmonary vasoconstriction requires connexin 40–mediated endothelial signal conduction","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Neuroscience of respiration and sleep","field":"Neuroscience","cited_by":144,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"Canadian Institutes of Health Research","keywords":"Vasoconstriction; Depolarization; Hypoxic pulmonary vasoconstriction; Hypoxia (environmental); Apocynin; Connexin; Vasodilation; Cell biology; Lung; Chemistry; Gap junction; Arteriole; Endothelium; Biology; Internal medicine; NADPH oxidase; Endocrinology; Reactive oxygen species; Oxygen; Medicine; Intracellular; Circulatory system","score_opus":0.20023970836110885,"score_gpt":0.3830804311125014,"score_spread":0.18284072275139254,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2134179936","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9916284,0.000052719617,0.0011658209,0.0013897682,0.004201804,0.00017845251,0.0000071292766,0.00004689368,0.0013290141],"genre_scores_gemma":[0.9941338,0.00013034177,0.00042685223,0.0030658368,0.0020239402,0.0000036576334,0.0000021858818,0.000013440608,0.00019995678],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9961122,0.0009734801,0.0016200886,0.00023661712,0.0007584002,0.00029917332],"domain_scores_gemma":[0.99582016,0.0017141843,0.0015809623,0.00014617524,0.00021921583,0.00051929906],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0026914594,0.00015066157,0.00033725213,0.00025082997,0.00019371402,0.000093071474,0.00024515222,0.00017784082,0.00013478867],"category_scores_gemma":[0.0111492695,0.00012391512,0.00022990583,0.00048248045,0.00062417914,0.0022931641,0.000031290758,0.00058733724,0.00011045443],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013248227,0.0002352444,0.016271945,0.0000067208166,0.0000055739565,0.000017712824,0.00007097606,0.000063702675,0.9692282,0.002214061,0.00080482656,0.01094856],"study_design_scores_gemma":[0.002160343,0.0012233697,0.03710293,0.00008423619,0.00008332462,0.0008670281,0.00015466394,0.005448356,0.9085077,0.0047152718,0.03925409,0.00039867894],"about_ca_topic_score_codex":0.0000027641545,"about_ca_topic_score_gemma":4.0775421e-7,"teacher_disagreement_score":0.06072049,"about_ca_system_score_codex":0.000041139083,"about_ca_system_score_gemma":0.00023625651,"threshold_uncertainty_score":0.9971802},"labels":[],"label_agreement":null},{"id":"W2134283161","doi":"10.1172/jci14596","title":"Defective fatty acid uptake modulates insulin responsiveness and metabolic responses to diet in CD36-null mice","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Metabolism and Genetic Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":278,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Canadian Institutes of Health Research; National Institutes of Health; American Heart Association","keywords":"Internal medicine; Endocrinology; CD36; Insulin resistance; Hyperinsulinemia; Insulin; Biology; Glucose uptake; Fructose; Triglyceride; Fatty acid; Glycogen; Glycogen synthase; Medicine; Cholesterol; Biochemistry","score_opus":0.05133764479509177,"score_gpt":0.33714139656338066,"score_spread":0.28580375176828887,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2134283161","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9910718,0.006900687,0.000369217,0.0011457424,0.0002729475,0.00015269648,0.000008955876,0.0000028258914,0.00007511378],"genre_scores_gemma":[0.990269,0.0031000695,0.0049257856,0.0012954946,0.00028269173,0.000005733765,0.0000050188146,0.00001431434,0.00010190196],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99779356,0.00063316646,0.0009598162,0.000259978,0.00018569303,0.0001677687],"domain_scores_gemma":[0.9987609,0.00018749788,0.00038421422,0.00018219235,0.00023972623,0.00024547335],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001718984,0.00014091785,0.00038927802,0.00014751127,0.000040037383,0.000028935754,0.00015868316,0.00019489265,0.000016601214],"category_scores_gemma":[0.005272169,0.000122773,0.00012474229,0.00018804462,0.00015571229,0.000016671576,0.00006630035,0.00021483442,0.00000943385],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007603401,0.00047770355,0.35314137,0.000046149966,0.00025670906,0.000031554388,0.0012711922,0.00096283545,0.56163025,0.00032959474,0.0023123163,0.0719369],"study_design_scores_gemma":[0.001525452,0.0008722001,0.9266316,0.00004346165,0.00005082211,0.00001852759,0.00012265808,0.00016283346,0.056421876,0.0014746928,0.012510446,0.00016542146],"about_ca_topic_score_codex":0.000009371647,"about_ca_topic_score_gemma":0.000035925306,"teacher_disagreement_score":0.57349026,"about_ca_system_score_codex":0.0000030406038,"about_ca_system_score_gemma":0.0000834605,"threshold_uncertainty_score":0.631166},"labels":[],"label_agreement":null},{"id":"W2135277389","doi":"10.1172/jci18370","title":"Hyperosmolarity enhances the lung capillary barrier","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Respiratory Support and Mechanisms","field":"Medicine","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; Columbia College","funders":"National Heart, Lung, and Blood Institute; National Institutes of Health; Stony Wold-Herbert Fund","keywords":"Actin cytoskeleton; Barrier function; Proinflammatory cytokine; Lung; Cell biology; Actin; Cytoskeleton; Chemistry; Tight junction; Endothelial stem cell; Biophysics; Inflammation; Medicine; Immunology; Biology; Cell; Internal medicine; Biochemistry; In vitro","score_opus":0.08616369987223477,"score_gpt":0.38664824658543306,"score_spread":0.3004845467131983,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2135277389","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944435,0.0006682179,0.0007396977,0.0015569426,0.0011274781,0.00012248666,4.518021e-7,0.000007262394,0.0013339781],"genre_scores_gemma":[0.9902423,0.00014911462,0.0029631539,0.005492819,0.0006616074,0.0000014373909,0.000001260598,0.00000946909,0.00047881444],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99800813,0.0003144204,0.0010731841,0.00009921048,0.00038664782,0.00011842504],"domain_scores_gemma":[0.99829394,0.000308736,0.0006068936,0.00017615665,0.00030876542,0.00030552162],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0036151754,0.00008411198,0.00034106383,0.00004339069,0.00007979732,0.000022166503,0.000087991095,0.0001409647,0.000186571],"category_scores_gemma":[0.0030750853,0.000047217465,0.00024168984,0.00011414951,0.00016996701,0.00018257917,0.000008690803,0.0005594545,0.000014419721],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003366984,0.00026917222,0.8114258,0.000100988866,0.0003448568,0.00020796015,0.0006324611,0.0000101234355,0.12941372,0.009898701,0.04012576,0.007233722],"study_design_scores_gemma":[0.0045184316,0.0024767758,0.24507938,0.00037468373,0.0008254456,0.00089247694,0.0008723698,0.0002601593,0.38403645,0.035036027,0.32531613,0.00031166812],"about_ca_topic_score_codex":0.0000019576805,"about_ca_topic_score_gemma":0.0000012831752,"teacher_disagreement_score":0.56634647,"about_ca_system_score_codex":0.000018008026,"about_ca_system_score_gemma":0.0005741828,"threshold_uncertainty_score":0.36813864},"labels":[],"label_agreement":null},{"id":"W2135504026","doi":"10.1172/jci39703","title":"Identification of FGFR4-activating mutations in human rhabdomyosarcomas that promote metastasis in xenotransplanted models","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Fibroblast Growth Factor Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":322,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pediatric Oncology Group","funders":"National Cancer Institute; National Heart, Lung, and Blood Institute; National Institutes of Health","keywords":"Cancer research; Fibroblast growth factor receptor 4; Oncogene; Biology; Receptor tyrosine kinase; Metastasis; Cancer; Signal transduction; Cell cycle; Fibroblast growth factor receptor; Receptor; Cell biology; Fibroblast growth factor; Genetics","score_opus":0.1159110004766093,"score_gpt":0.40958608121143014,"score_spread":0.29367508073482085,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2135504026","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99624574,0.000070072914,0.0029378482,0.00047538526,0.000043192093,0.00017118808,0.0000065454956,0.000002366077,0.000047675643],"genre_scores_gemma":[0.9976007,0.00004451136,0.002185172,0.000044181164,0.00006447507,0.0000024905655,0.000038954113,0.0000088459055,0.000010690575],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997443,0.00037894238,0.0015511852,0.00017166512,0.0003123284,0.00014284505],"domain_scores_gemma":[0.99855536,0.00010327498,0.0008723935,0.00016015331,0.00022016896,0.000088619345],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021613415,0.0000938407,0.00029132058,0.00022802687,0.000027726086,0.000018599116,0.00018919798,0.00015534594,0.0000035330083],"category_scores_gemma":[0.00088918314,0.00008826665,0.00012589915,0.00026816683,0.00011826537,0.000054420616,0.000016208294,0.00034698253,4.2482836e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015438431,0.00016986896,0.026730351,0.000030194002,0.000024623612,0.000005092026,0.00018001122,0.00312761,0.9671984,0.00019649035,0.000013310151,0.00216968],"study_design_scores_gemma":[0.0012200687,0.00073370454,0.23834091,0.00020678145,0.000015494184,0.000010511288,0.00006913831,0.003404547,0.74529356,0.01059309,0.000015272386,0.0000969246],"about_ca_topic_score_codex":0.000018326893,"about_ca_topic_score_gemma":0.000032667882,"teacher_disagreement_score":0.22190483,"about_ca_system_score_codex":0.000023069906,"about_ca_system_score_gemma":0.00015358941,"threshold_uncertainty_score":0.35994095},"labels":[],"label_agreement":null},{"id":"W2135521893","doi":"10.1172/jci45235","title":"Comparative transcriptomics of extreme phenotypes of human HIV-1 infection and SIV infection in sooty mangabey and rhesus macaque","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":185,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; China Scholarship Council; Ragon Institute of MGH, MIT and Harvard; Centre Hospitalier Universitaire Vaudois; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; National Science Foundation","keywords":"Biology; Transcriptome; Immunology; Virology; Simian immunodeficiency virus; Immunodeficiency; Viral load; Rhesus macaque; Macaque; Gene; Immune system; Genetics; Virus; Gene expression","score_opus":0.20280587566445654,"score_gpt":0.3829761279462368,"score_spread":0.18017025228178027,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2135521893","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989591,0.00035486824,0.0001702513,0.0000569342,0.00012168305,0.00012288243,0.000009148396,0.0000032639668,0.00020186533],"genre_scores_gemma":[0.9990258,0.0005757058,0.0003141442,0.00001457452,0.000021295726,0.0000019973852,0.000015689253,0.0000037230686,0.000027064612],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99847686,0.00042175053,0.00086753094,0.00009790476,0.0000435194,0.00009242973],"domain_scores_gemma":[0.99895644,0.00021141613,0.00057085743,0.000059674294,0.00015610734,0.00004549795],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00070366677,0.000079997655,0.00041570285,0.00015865052,0.000037493723,0.0000036210286,0.000034218843,0.00016715818,0.000037368787],"category_scores_gemma":[0.00019277686,0.00006414254,0.000069075584,0.00008386058,0.00048661768,0.00016356898,0.000013511603,0.00032967833,0.0000040187683],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047483185,0.0003311859,0.8897311,0.000053088927,0.00017937037,0.0000024108006,0.0018251722,0.0000059470813,0.10422296,0.00056135445,0.00010143965,0.002511154],"study_design_scores_gemma":[0.0024171588,0.001422789,0.9348392,0.000108556305,0.00006386702,0.000019492349,0.00006673199,0.000024761648,0.05814222,0.0027762996,0.00006861691,0.000050321407],"about_ca_topic_score_codex":0.00045800046,"about_ca_topic_score_gemma":0.00046023223,"teacher_disagreement_score":0.046080746,"about_ca_system_score_codex":0.000017504248,"about_ca_system_score_gemma":0.00006502816,"threshold_uncertainty_score":0.2615657},"labels":[],"label_agreement":null},{"id":"W2136075582","doi":"10.1172/jci13971","title":"Enhanced ERK-1/2 activation in mice susceptible to coxsackievirus-induced myocarditis","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Viral Infections and Immunology Research","field":"Medicine","cited_by":104,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Amgen (Canada); University Health Network; University of Toronto; Canadian Heart Research Centre; Hospital for Sick Children; Heart and Stroke Foundation","funders":"Canadian Institutes of Health Research; University of Toronto; Heart and Stroke Foundation of Canada","keywords":"MAPK/ERK pathway; Jurkat cells; Myocarditis; Viral Myocarditis; Kinase; Coxsackievirus; Myocyte; T cell; Cell biology; Immune system; Biology; Chemistry; Immunology; Medicine; Virus; Internal medicine; Enterovirus","score_opus":0.1749567905483057,"score_gpt":0.43113673614328857,"score_spread":0.25617994559498286,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2136075582","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9887159,0.00005695321,0.00077953713,0.00806496,0.00041486238,0.00023511834,5.522629e-7,0.000011553581,0.001720573],"genre_scores_gemma":[0.99602866,0.00023660167,0.0011080536,0.0016898033,0.0005083076,0.0000064968917,0.0000027878466,0.000012147924,0.00040715968],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.997866,0.0002797553,0.001206469,0.00015318148,0.00030900544,0.00018563391],"domain_scores_gemma":[0.99840033,0.00034971352,0.00039075292,0.0001460727,0.00047568447,0.00023741894],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014706928,0.0000947508,0.00045831298,0.00035984808,0.000050565508,0.000023857065,0.00008774501,0.00020739199,0.0002487908],"category_scores_gemma":[0.0042142505,0.00008056184,0.00016867489,0.0006076229,0.000096025295,0.00035073824,0.000023240973,0.00085257523,0.00016420698],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039189262,0.00042778158,0.034045495,0.000027700782,0.000114908595,0.000018573179,0.00033245748,0.00006743127,0.89335346,0.00012814603,0.0075889076,0.06350322],"study_design_scores_gemma":[0.006104096,0.009432668,0.5824404,0.0009015726,0.000093621566,0.00008403182,0.00024841045,0.0012885615,0.39296442,0.0010269711,0.0051706154,0.00024466263],"about_ca_topic_score_codex":0.00003687521,"about_ca_topic_score_gemma":0.000011873609,"teacher_disagreement_score":0.54839486,"about_ca_system_score_codex":0.0001046551,"about_ca_system_score_gemma":0.00012772577,"threshold_uncertainty_score":0.5045156},"labels":[],"label_agreement":null},{"id":"W2138822762","doi":"10.1172/jci64704","title":"PD1-based DNA vaccine amplifies HIV-1 GAG-specific CD8+ T cells in mice","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immunotherapy and Immune Responses","field":"Immunology and Microbiology","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Cytotoxic T cell; DNA vaccination; Virology; Antigen; CD8; Biology; Vaccination; Vaccinia; Immunology; Cross-presentation; T cell; Immunity; Antibody; Immunization; Immune system; MHC class I; Recombinant DNA","score_opus":0.04905012180690572,"score_gpt":0.3121046314346811,"score_spread":0.2630545096277754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2138822762","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.991521,0.003192403,0.00031771263,0.0029971283,0.0016341957,0.00019665965,0.000004058211,0.000016551623,0.00012027884],"genre_scores_gemma":[0.9954793,0.0007633097,0.0008673107,0.0013021834,0.00016818856,0.000007048254,0.00002101902,0.000019486894,0.0013721832],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9966323,0.0008504604,0.0019981468,0.00017940752,0.00007632646,0.00026340727],"domain_scores_gemma":[0.99663675,0.0017666043,0.0010415068,0.00021839459,0.000285567,0.00005119658],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0018774527,0.00017604264,0.0005990239,0.00024332767,0.00008216883,0.000037713304,0.00030747292,0.000379672,0.0010797384],"category_scores_gemma":[0.000723179,0.000138723,0.0002611588,0.00021426336,0.0002589214,0.00035783305,0.000024599476,0.0008681454,0.00089069415],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009449715,0.00023257441,0.009574558,0.0000131848865,0.00008352005,0.0000057385637,0.00017815577,0.00006445904,0.95632803,0.00012092445,0.027348656,0.0051052165],"study_design_scores_gemma":[0.006769371,0.0009675051,0.20479049,0.00029324103,0.00003716296,0.0000536652,0.0002141387,0.000034631987,0.704617,0.0023058841,0.07964262,0.0002742733],"about_ca_topic_score_codex":0.000035238645,"about_ca_topic_score_gemma":0.000004293086,"teacher_disagreement_score":0.25171104,"about_ca_system_score_codex":0.000038121485,"about_ca_system_score_gemma":0.0002174397,"threshold_uncertainty_score":0.9998872},"labels":[],"label_agreement":null},{"id":"W2140002624","doi":"10.1172/jci33637","title":"Dopamine 5 receptor mediates Ang II type 1 receptor degradation via a ubiquitin-proteasome pathway in mice and human cells","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":95,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"National Center for Research Resources; National Institute of Child Health and Human Development; National Heart, Lung, and Blood Institute; National Institute of Diabetes and Digestive and Kidney Diseases; National Cancer Institute; National Institutes of Health","keywords":"Fenoldopam; Receptor; Endocrinology; Angiotensin II; Dopamine; Internal medicine; Cell biology; Biology; Dopamine receptor; Ubiquitin; Proteasome; Blood pressure; Biochemistry; Medicine; Gene","score_opus":0.0522575361822564,"score_gpt":0.3130316294920882,"score_spread":0.2607740933098318,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2140002624","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982762,0.00047074203,0.00007617411,0.0004579288,0.00041469352,0.00020239844,0.000008943594,0.0000067807423,0.000086147025],"genre_scores_gemma":[0.9918631,0.00057294866,0.005784985,0.0003631825,0.0010536811,0.0000064289293,0.00009677826,0.000017684199,0.00024125664],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99789774,0.00034846476,0.0011102448,0.00024109829,0.00022626351,0.00017619885],"domain_scores_gemma":[0.9984793,0.000100344405,0.00077067415,0.00013483029,0.00028862566,0.00022624126],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015414029,0.00015275915,0.0003286405,0.00009519039,0.00012328573,0.000016009757,0.00014853357,0.00027801513,0.000040992207],"category_scores_gemma":[0.0009257306,0.00013600422,0.00010119408,0.00015830678,0.00022880473,0.000031583975,0.00007085744,0.00035262672,0.000009839877],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014348875,0.000096783646,0.013247948,0.000022176853,0.000021251915,0.0000041699514,0.0001324278,0.0000063269504,0.9826452,0.000035825717,0.0009632853,0.0026811012],"study_design_scores_gemma":[0.0012400264,0.0018681623,0.009861696,0.00010013709,0.000011838648,0.000044959215,0.000039438037,0.000036775586,0.97519726,0.0004325072,0.010982184,0.00018501127],"about_ca_topic_score_codex":0.000027496746,"about_ca_topic_score_gemma":0.00002817925,"teacher_disagreement_score":0.010018898,"about_ca_system_score_codex":0.000018698856,"about_ca_system_score_gemma":0.00019019381,"threshold_uncertainty_score":0.5546091},"labels":[],"label_agreement":null},{"id":"W2140528350","doi":"10.1172/jci29255","title":"Role for protease activity in visceral pain in irritable bowel syndrome","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Gastrointestinal motility and disorders","field":"Medicine","cited_by":580,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Canadian Institutes of Health Research; National Institutes of Health; Fondation pour la Recherche Médicale; Alberta Heritage Foundation for Medical Research; Crohn's and Colitis Foundation of Canada; Canadian Association of Gastroenterology; Crohn's and Colitis Foundation","keywords":"Irritable bowel syndrome; Medicine; Proteases; Hyperalgesia; Visceral pain; Protease; Internal medicine; Protease-activated receptor 2; Tryptase; Sensitization; Allodynia; Gastroenterology; Endocrinology; Immunology; Nociception; Receptor; Mast cell; Chemistry; Enzyme; Biochemistry","score_opus":0.06498046728787583,"score_gpt":0.3771222736920648,"score_spread":0.312141806404189,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2140528350","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9919272,0.000037184007,0.0038022194,0.0035364751,0.00008788607,0.00047853892,0.0000011070047,0.000006588507,0.00012279609],"genre_scores_gemma":[0.98410493,0.0000038707753,0.015025176,0.00067464093,0.00012354182,0.0000057185066,0.0000026640118,0.000008841233,0.000050598646],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978614,0.00022286104,0.001318792,0.00013843308,0.00023574544,0.00022279074],"domain_scores_gemma":[0.9979833,0.00096396945,0.00050942134,0.00009361948,0.00016029138,0.0002894099],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.011897356,0.00009074156,0.00041946364,0.00019831465,0.000020010706,0.000011569262,0.00006507055,0.0001266769,0.000011350751],"category_scores_gemma":[0.0147553105,0.000079346886,0.00016639907,0.00020588128,0.00010483878,0.0002489048,0.000011025204,0.00061414315,0.0000020959108],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022106455,0.00077207346,0.9765118,0.00012777247,0.000011290332,0.00011587683,0.00007874761,0.00011899601,0.0032156992,0.000057727666,0.0001500288,0.016629344],"study_design_scores_gemma":[0.003888354,0.002644322,0.97747463,0.0005421864,0.000021720178,0.00012313426,0.00014082,0.003677567,0.000447248,0.010840553,0.00013924763,0.00006020218],"about_ca_topic_score_codex":0.00009314117,"about_ca_topic_score_gemma":0.0002169543,"teacher_disagreement_score":0.016569141,"about_ca_system_score_codex":0.00007897212,"about_ca_system_score_gemma":0.0002886264,"threshold_uncertainty_score":0.9935438},"labels":[],"label_agreement":null},{"id":"W2141478377","doi":"10.1172/jci39922","title":"Development of a cross-platform biomarker signature to detect renal transplant tolerance in humans","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Renal Transplantation Outcomes and Treatments","field":"Medicine","cited_by":517,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Menzies Centre for Australian Studies, King's College London, University of London; National Institute for Health and Care Research; Anthony Nolan; Medical Research Council; Immune Tolerance Network; Deutsche Forschungsgemeinschaft; King's College London; King's College Hospital NHS Foundation Trust","keywords":"Biomarker; Transplantation; Medicine; Gene signature; Immunology; Microarray; Renal transplant; Gene expression profiling; Biology; Gene expression; Internal medicine; Gene","score_opus":0.09714995730756538,"score_gpt":0.4166318567206759,"score_spread":0.3194818994131105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141478377","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99787796,0.00003161185,0.001018028,0.00031295503,0.00035209436,0.0001868032,0.000005894638,0.000004548594,0.00021008674],"genre_scores_gemma":[0.94473463,0.000027844133,0.05467273,0.00037079575,0.00010408575,0.0000031193242,0.00001122168,0.0000085042275,0.000067057736],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99753827,0.000033792196,0.0017745629,0.00013245309,0.0003920824,0.00012886703],"domain_scores_gemma":[0.99864423,0.00021918614,0.0005232446,0.000108576234,0.00023848585,0.00026629245],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011555369,0.000114793576,0.00047566128,0.00018562072,0.000031432977,0.000013984812,0.00009186928,0.0001851951,0.000053874763],"category_scores_gemma":[0.00025014364,0.00008023683,0.00017866386,0.00020505185,0.000091859605,0.00016557447,0.000004823689,0.000535686,0.000007094681],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022148394,0.0002574554,0.78355294,0.00018411351,0.00019643313,0.00020369764,0.0015118337,0.00014929607,0.19078039,0.00010819743,0.00003165324,0.020809164],"study_design_scores_gemma":[0.0035953734,0.00032425756,0.9376146,0.00091072003,0.00006358064,0.00007040969,0.000009065986,0.00007183821,0.056293715,0.0003008866,0.0006694286,0.00007611802],"about_ca_topic_score_codex":0.0000054336383,"about_ca_topic_score_gemma":0.00013111279,"teacher_disagreement_score":0.15406168,"about_ca_system_score_codex":0.000023223289,"about_ca_system_score_gemma":0.000317536,"threshold_uncertainty_score":0.32719627},"labels":[],"label_agreement":null},{"id":"W2141917858","doi":"10.1172/jci15595","title":"Glucagon-like peptide-1 receptor stimulation increases blood pressure and heart rate and activates autonomic regulatory neurons","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Regulation of Appetite and Obesity","field":"Neuroscience","cited_by":473,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institutes of Health","keywords":"Endocrinology; Internal medicine; Glucagon-like peptide-1; Catecholamine; Adrenal medulla; Receptor; Biology; Medicine; Type 2 diabetes; Diabetes mellitus","score_opus":0.06906751738822468,"score_gpt":0.31581175006090023,"score_spread":0.24674423267267553,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141917858","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971495,0.00029502303,0.000014943655,0.0020304748,0.00027987786,0.00013696593,0.0000042219376,0.000025210793,0.00006376434],"genre_scores_gemma":[0.9966352,0.0005037899,0.00090528483,0.0012201696,0.00036691266,0.0000011257031,0.0000013750445,0.000013966057,0.00035216456],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.997818,0.0005983334,0.00092899887,0.00027704274,0.00024318024,0.00013446483],"domain_scores_gemma":[0.9971102,0.0015420957,0.0007999617,0.00015923675,0.00009390366,0.00029463472],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000990062,0.0001356765,0.00033285154,0.000108883534,0.0001632701,0.00010564849,0.000100439356,0.00013586995,0.000075134754],"category_scores_gemma":[0.0029020188,0.00011833107,0.00009113662,0.00012400711,0.0003902066,0.00085172174,0.00004760498,0.00032232763,0.000009954952],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023975187,0.00043581246,0.21380375,0.000071216564,0.000083155566,0.000010535824,0.00028366005,0.0021066968,0.77045673,0.0010512596,0.007093719,0.004363681],"study_design_scores_gemma":[0.0012952853,0.00048160204,0.88787174,0.00011048076,0.00018657056,0.000064695036,0.000011336016,0.011587297,0.0882367,0.0017989423,0.008198126,0.00015724819],"about_ca_topic_score_codex":0.0000074133645,"about_ca_topic_score_gemma":0.0000012902817,"teacher_disagreement_score":0.68222004,"about_ca_system_score_codex":0.0000066141833,"about_ca_system_score_gemma":0.000053830227,"threshold_uncertainty_score":0.48254007},"labels":[],"label_agreement":null},{"id":"W2141919622","doi":"10.1172/jci33166","title":"No evidence that skewing of X chromosome inactivation patterns is transmitted to offspring in humans","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Genetic and Clinical Aspects of Sex Determination and Chromosomal Abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":120,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Heart Institute; Hôpital Maisonneuve-Rosemont","funders":"","keywords":"X-inactivation; Biology; Skewed X-inactivation; Offspring; X chromosome; Haematopoiesis; Genetics; Immunology; Pregnancy; Gene; Stem cell","score_opus":0.07610582945069332,"score_gpt":0.3641251878865568,"score_spread":0.28801935843586346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141919622","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99483216,0.00008982941,0.0039324104,0.0005867052,0.00026109148,0.00009871529,0.0000021924016,0.0000025236739,0.00019438667],"genre_scores_gemma":[0.9965384,0.00021963532,0.0014098932,0.0012444768,0.0004241785,0.0000012457351,0.0000039486727,0.0000089353725,0.00014927276],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978517,0.00010307057,0.0014222483,0.00017407256,0.00030099545,0.00014789567],"domain_scores_gemma":[0.9983156,0.00022912864,0.00081206235,0.00014058547,0.0003409852,0.00016164534],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001890329,0.000103898215,0.00030080864,0.00010331021,0.000026220941,0.000014306851,0.00019071784,0.00017316276,0.000037280646],"category_scores_gemma":[0.0013449173,0.000092466515,0.00016959147,0.000121977144,0.00008769234,0.000031829946,0.000033560627,0.00021096256,0.0000039021206],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004963939,0.00019756446,0.6473464,0.000113085836,0.00005095901,0.0000113204815,0.0005648605,0.000057077246,0.33236653,0.000080664184,0.00016604066,0.01854912],"study_design_scores_gemma":[0.0006632095,0.001243582,0.61668926,0.00049089856,0.00001806147,0.0000054081243,0.0002631342,0.00002850736,0.37917843,0.00035521112,0.0009484977,0.00011580769],"about_ca_topic_score_codex":0.000020209405,"about_ca_topic_score_gemma":0.000035539495,"teacher_disagreement_score":0.04681193,"about_ca_system_score_codex":0.000016180607,"about_ca_system_score_gemma":0.00009569975,"threshold_uncertainty_score":0.3770675},"labels":[],"label_agreement":null},{"id":"W2142414068","doi":"10.1172/jci20518","title":"Gluco-incretins control insulin secretion at multiple levels as revealed in mice lacking GLP-1 and GIP receptors","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":222,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto","funders":"European Commission; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; National Science Foundation","keywords":"Internal medicine; Endocrinology; Incretin; Insulin; Receptor; Secretion; Insulin oscillation; Islet; Hormone; In vivo; Biology; Chemistry; Diabetes mellitus; Medicine; Type 2 diabetes","score_opus":0.0666178616087237,"score_gpt":0.3488320683657076,"score_spread":0.28221420675698394,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2142414068","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99278843,0.00035370627,0.00026446136,0.005522058,0.0004956616,0.00024505623,0.0000032451483,0.000017455273,0.00030995213],"genre_scores_gemma":[0.9922725,0.00026046042,0.003310015,0.0034313563,0.0005565935,0.0000032247058,0.000011687562,0.000014639546,0.0001395554],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974491,0.00030621715,0.0015395548,0.00018667335,0.00035241753,0.00016605308],"domain_scores_gemma":[0.99707526,0.0012584378,0.0008928886,0.00010680462,0.0002773977,0.00038923303],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0025514052,0.00013390003,0.0006264997,0.00016776595,0.000056012894,0.00002063362,0.000053372212,0.00023961072,0.00007243483],"category_scores_gemma":[0.016441217,0.00011018247,0.00014137717,0.00020866499,0.00019430925,0.00022111514,0.000018708188,0.0005098959,0.000032201504],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015587388,0.00013329907,0.95298916,0.000075590404,0.00007593818,0.000034563152,0.00039327695,0.00017563823,0.041739132,0.00018777768,0.0003418916,0.0022949711],"study_design_scores_gemma":[0.024995806,0.0012774973,0.95613366,0.001067896,0.00015794428,0.00013003527,0.00013035767,0.0013778153,0.009190885,0.0039780396,0.0014076616,0.00015239323],"about_ca_topic_score_codex":0.00006878729,"about_ca_topic_score_gemma":0.000035296853,"teacher_disagreement_score":0.032548245,"about_ca_system_score_codex":0.00017441137,"about_ca_system_score_gemma":0.0003244038,"threshold_uncertainty_score":0.9918437},"labels":[],"label_agreement":null},{"id":"W2142713036","doi":"10.1172/jci39395","title":"The cytolytic molecules Fas ligand and TRAIL are required for murine thymic graft-versus-host disease","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immunotherapy and Immune Responses","field":"Immunology and Microbiology","cited_by":71,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases; Elsa U. Pardee Foundation; Canadian Institutes of Health Research; National Cancer Institute; National Institutes of Health; Deutsche Krebshilfe; National Heart, Lung, and Blood Institute; Emerald Foundation; Memorial Sloan-Kettering Cancer Center; Deutsche Forschungsgemeinschaft; Commonwealth Foundation; American Association for Cancer Research","keywords":"Cytolysis; Fas ligand; Host (biology); Ligand (biochemistry); Immunology; Graft-versus-host disease; Virology; Biology; Disease; Chemistry; Medicine; Cell biology; Pathology; Cytotoxicity; Apoptosis; Biochemistry; Genetics; In vitro; Receptor; Programmed cell death","score_opus":0.06071592026586368,"score_gpt":0.34689813843789363,"score_spread":0.28618221817202993,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2142713036","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97321,0.016262196,0.00021942574,0.009085671,0.0009823298,0.00020092215,0.000008879289,0.000012883983,0.000017700997],"genre_scores_gemma":[0.99553776,0.0026364704,0.00017241614,0.00085362064,0.00018603096,0.0000040894865,0.000009253716,0.000010660482,0.0005897159],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9982547,0.0003188867,0.0010258096,0.0001413815,0.000059223854,0.00019999233],"domain_scores_gemma":[0.99672294,0.0019796053,0.000861914,0.00017914953,0.0001866335,0.00006975724],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001244488,0.00013801275,0.0003597897,0.00006060389,0.00029929704,0.000045855042,0.00019710281,0.00016725043,0.000006874027],"category_scores_gemma":[0.003429664,0.000088190944,0.00024536386,0.00007661456,0.0005303491,0.00019042655,0.00001523989,0.0003388681,0.000007931005],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.064599775,0.0005638743,0.008319704,0.00006430913,0.0011661636,0.000034273842,0.0006848188,0.000024647221,0.80374044,0.006409026,0.012858451,0.10153451],"study_design_scores_gemma":[0.026958527,0.00848902,0.71994233,0.00072655774,0.00074383593,0.00014958561,0.00093476987,0.00014628335,0.12343823,0.034819268,0.083049744,0.0006018189],"about_ca_topic_score_codex":0.0000019595564,"about_ca_topic_score_gemma":0.00000360677,"teacher_disagreement_score":0.71162266,"about_ca_system_score_codex":0.00001601112,"about_ca_system_score_gemma":0.00017854653,"threshold_uncertainty_score":0.4105876},"labels":[],"label_agreement":null},{"id":"W2143398582","doi":"10.1172/jci20806","title":"Hypoxia induces a functionally significant and translationally efficient neuronal NO synthase mRNA variant","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Nitric Oxide and Endothelin Effects","field":"Medicine","cited_by":111,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; McGill University; Christie (Canada); University of Toronto","funders":"Canadian Institutes of Health Research; Heart and Stroke Foundation of Canada","keywords":"Hypoxia (environmental); Endocrinology; Internal medicine; Biology; Contractility; Vascular smooth muscle; Messenger RNA; Downregulation and upregulation; Mesenteric arteries; Aorta; Chemistry; Gene; Biochemistry; Artery; Medicine","score_opus":0.05954789840692571,"score_gpt":0.33388621764346876,"score_spread":0.27433831923654306,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2143398582","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9820793,0.00019286973,0.0012588387,0.015230216,0.00051736267,0.00017586358,0.000005211495,0.00001542433,0.00052490924],"genre_scores_gemma":[0.9829698,0.00009065224,0.011492763,0.0031597442,0.0021216976,0.0000025921931,0.000006774485,0.000015384605,0.00014059882],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9974644,0.00021263707,0.0013604484,0.00019262297,0.0006180136,0.00015186751],"domain_scores_gemma":[0.99697703,0.0013910484,0.0006213859,0.00011033823,0.00045176997,0.00044844288],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021835528,0.00013770684,0.00043896408,0.0001554634,0.00006182689,0.000029478699,0.00006960995,0.00014560913,0.000119401564],"category_scores_gemma":[0.0026945476,0.00010288278,0.00020497055,0.00015198419,0.0001815607,0.00016764093,0.000012088769,0.00056573935,0.000045799377],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.012664476,0.005469171,0.112500064,0.00055430597,0.0016781287,0.0010198992,0.0011069444,0.015757162,0.597193,0.005043635,0.02639497,0.22061823],"study_design_scores_gemma":[0.010349901,0.0036468217,0.93214965,0.0005928745,0.0007621977,0.0011312506,0.000041851534,0.025386335,0.0049769883,0.0020944478,0.018520242,0.00034741068],"about_ca_topic_score_codex":0.0000034356558,"about_ca_topic_score_gemma":0.0000010498148,"teacher_disagreement_score":0.81964964,"about_ca_system_score_codex":0.000029674819,"about_ca_system_score_gemma":0.0005148448,"threshold_uncertainty_score":0.4195438},"labels":[],"label_agreement":null},{"id":"W2144000500","doi":"10.1172/jci10942","title":"Relative contributions of testosterone and estrogen in regulating bone resorption and formation in normal elderly men","year":2000,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Bone health and osteoporosis research","field":"Medicine","cited_by":760,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Nutrition, Metabolism and Diabetes","funders":"National Center for Research Resources; National Institute on Aging; National Institutes of Health; Deutsches Krebsforschungszentrum","keywords":"Endocrinology; Internal medicine; Bone resorption; Bone remodeling; Osteocalcin; Estrogen; Testosterone (patch); Resorption; Hormone; Medicine; Osteopenia; Osteoporosis; Bone mineral; Biology; Alkaline phosphatase","score_opus":0.06689837600104416,"score_gpt":0.40582160781454113,"score_spread":0.338923231813497,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2144000500","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945654,0.00046004175,0.000052136842,0.0044376724,0.00001573105,0.00025098922,0.000003032014,0.0000025791778,0.0002123933],"genre_scores_gemma":[0.9967226,0.00057410105,0.0024555419,0.0001178132,0.000069754424,0.0000028758875,0.000010116857,0.0000044295343,0.000042809355],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9976026,0.0002955707,0.0016205389,0.00008877247,0.0002573787,0.00013518163],"domain_scores_gemma":[0.99844676,0.00052045035,0.0005373611,0.000064633416,0.00021747831,0.00021331366],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0028085893,0.00006091393,0.0003843727,0.00020622207,0.00003128544,0.00000898646,0.000021602315,0.00014983052,0.000015143571],"category_scores_gemma":[0.0022173093,0.000052125622,0.000036958336,0.00023083134,0.0001709795,0.00053438643,0.000010465577,0.00050802936,9.598502e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021663427,0.00020834048,0.81493783,0.0002517369,0.00001953205,0.000025218322,0.0012885882,0.000046285593,0.015127086,0.00043770747,0.0001222014,0.16536915],"study_design_scores_gemma":[0.005526045,0.0018363554,0.9808552,0.00083169574,0.000028148545,0.00016187601,0.0001674289,0.0045642317,0.0030274664,0.002875114,0.00007944791,0.000046967692],"about_ca_topic_score_codex":0.00008928554,"about_ca_topic_score_gemma":0.00006164295,"teacher_disagreement_score":0.16591741,"about_ca_system_score_codex":0.000055785014,"about_ca_system_score_gemma":0.0001557959,"threshold_uncertainty_score":0.26544866},"labels":[],"label_agreement":null},{"id":"W2144194261","doi":"10.1172/jci32693","title":"OX40 ligand expressed by DCs costimulates NKT and CD4+ Th cell antitumor immunity in mice","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":113,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Aging","funders":"Ministry of Education, Culture, Sports, Science and Technology; Japan Research Foundation for Clinical Pharmacology; Cell Science Research Foundation","keywords":"Natural killer T cell; CD1D; Immunology; Biology; T cell; Cancer research; Cell biology; Immune system","score_opus":0.0366424766813998,"score_gpt":0.3273371657934119,"score_spread":0.2906946891120121,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2144194261","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99435997,0.0017893732,0.00033511754,0.0003743686,0.0025346766,0.000087692766,0.0000017508046,0.000010767622,0.0005063002],"genre_scores_gemma":[0.99742806,0.0005757975,0.00019880316,0.00059607823,0.000086578846,5.3438947e-7,0.000029837734,0.000009295913,0.0010750005],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99791527,0.00035110212,0.0013703841,0.00013467045,0.000054542314,0.00017405718],"domain_scores_gemma":[0.9974051,0.0013873422,0.0008548522,0.000103771345,0.00019076075,0.00005818715],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025263275,0.000119549266,0.0003606391,0.00014404475,0.00008680976,0.00002537366,0.000115215276,0.00028854152,0.000089354784],"category_scores_gemma":[0.001361515,0.000101053236,0.0000974381,0.00012190739,0.00023434716,0.00035674512,0.00003071628,0.0009318169,0.000045019046],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00065418653,0.00021219645,0.04104098,0.00001495948,0.000035006433,0.000005265634,0.00022565527,0.000011546574,0.9434432,0.000016615773,0.013049582,0.0012908045],"study_design_scores_gemma":[0.0035723415,0.0006827711,0.12527083,0.00014117481,0.000046808327,0.000066437104,0.00041062201,0.00005207691,0.84758794,0.00027724743,0.021744857,0.00014686958],"about_ca_topic_score_codex":0.0000648104,"about_ca_topic_score_gemma":0.000011425743,"teacher_disagreement_score":0.09585523,"about_ca_system_score_codex":0.000028189897,"about_ca_system_score_gemma":0.000066051834,"threshold_uncertainty_score":0.41208315},"labels":[],"label_agreement":null},{"id":"W2144886836","doi":"10.1172/jci74572","title":"Shifting FcγRIIA-ITAM from activation to inhibitory configuration ameliorates arthritis","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":90,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Nautical Research Society","funders":"Institut National de la Santé et de la Recherche Médicale; Université Paris Diderot; Agence Nationale de la Recherche; Laboratoire d'Excellence Inflamex","keywords":"Immunoreceptor tyrosine-based activation motif; Syk; Tyrosine; Inflammation; Tyrosine kinase; Protein tyrosine phosphatase; Signal transduction; Cytokine; Immune system; Receptor; Cell biology; Immunology; Chemistry; Biology; Biochemistry","score_opus":0.09379721659222151,"score_gpt":0.40539424363081883,"score_spread":0.3115970270385973,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2144886836","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9807265,0.00008236933,0.0020997787,0.015529925,0.00047982446,0.00016045157,0.000003400496,0.000015230873,0.00090252794],"genre_scores_gemma":[0.9856031,0.0001056936,0.0062497724,0.0038934073,0.0038697405,0.0000028663342,0.000039737715,0.000014061091,0.0002216267],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99727017,0.00032745907,0.0014231136,0.00017888624,0.0006379192,0.0001624622],"domain_scores_gemma":[0.9967558,0.0012481483,0.00067391637,0.00013257415,0.00069999305,0.0004895893],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001955439,0.0001175327,0.00047957405,0.00016103563,0.00008507569,0.000054686516,0.000092656905,0.00015878273,0.00012624578],"category_scores_gemma":[0.0063398066,0.00009279639,0.00018007311,0.00021732942,0.00013502255,0.000317138,0.000026948092,0.0005780369,0.00010532623],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002075555,0.0003182071,0.2909181,0.000088604225,0.00021909969,0.00003610542,0.0009499603,0.00015331677,0.30857,0.002232159,0.020942431,0.37349644],"study_design_scores_gemma":[0.0024414542,0.0025229985,0.8235946,0.0014750102,0.00006552678,0.000029497322,0.00014960582,0.001921335,0.12540865,0.011051848,0.031132145,0.00020730094],"about_ca_topic_score_codex":0.00008140134,"about_ca_topic_score_gemma":0.000013076145,"teacher_disagreement_score":0.5326765,"about_ca_system_score_codex":0.000036550708,"about_ca_system_score_gemma":0.00023725306,"threshold_uncertainty_score":0.75897986},"labels":[],"label_agreement":null},{"id":"W2145031719","doi":"10.1172/jci12433","title":"CD8+ lymphocytes respond to different HIV epitopes in seronegative and infected subjects","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":215,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of Manitoba","funders":"Medical Research Council; Ontario HIV Treatment Network; Medical Research Council Canada; Elizabeth Glaser Pediatric AIDS Foundation","keywords":"Epitope; CTL*; Immunology; Cytotoxic T cell; Seroconversion; Virology; CD8; Biology; Immunodominance; HIV vaccine; Human leukocyte antigen; Medicine; Immune system; Antibody; Antigen; Genetics; Vaccine trial","score_opus":0.062280327744189484,"score_gpt":0.36693500109368093,"score_spread":0.3046546733494915,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2145031719","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99641156,0.0006392787,0.000039339142,0.0024011573,0.00020394377,0.0001640962,0.0000068435784,0.0000070762203,0.0001267125],"genre_scores_gemma":[0.99842817,0.00060572947,0.00022348808,0.00024368058,0.00006963634,0.0000053638596,0.00001700445,0.00000614479,0.00040081397],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99803674,0.00076152355,0.0007872193,0.00014638963,0.00006884333,0.00019927612],"domain_scores_gemma":[0.9977934,0.0015594648,0.00027291392,0.00009362791,0.00014302942,0.00013758916],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008653244,0.00010694159,0.00038310545,0.00021344914,0.00005963251,0.000019021529,0.000090810274,0.00015657491,0.000084551895],"category_scores_gemma":[0.0034132197,0.0000743163,0.00006736799,0.00018652808,0.0002014014,0.00014121854,0.000044329223,0.00033568236,0.0001336279],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015715101,0.00026385742,0.94654155,0.000009212312,0.00013947298,0.00008173706,0.00067125505,0.000017286462,0.035384074,0.00013039661,0.0013493359,0.013840294],"study_design_scores_gemma":[0.004161034,0.0013370961,0.9674002,0.00014846935,0.000022853521,0.000080921636,0.00010178718,0.000008090309,0.022487966,0.0011062173,0.0030649193,0.00008045786],"about_ca_topic_score_codex":0.000039876177,"about_ca_topic_score_gemma":0.00025139647,"teacher_disagreement_score":0.020858621,"about_ca_system_score_codex":0.00007022609,"about_ca_system_score_gemma":0.00017590197,"threshold_uncertainty_score":0.40861896},"labels":[],"label_agreement":null},{"id":"W2145063435","doi":"10.1172/jci64801","title":"2-Aminoadipic acid is a biomarker for diabetes risk","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":468,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; Canadian Institutes of Health Research; National Institutes of Health; Novo Nordisk Fonden; Fondation Leducq; National Institute of General Medical Sciences; American Heart Association","keywords":"Metabolite; Diabetes mellitus; Metabolomics; Metabolome; Type 2 diabetes; Internal medicine; Medicine; Endocrinology; Biomarker; Framingham Risk Score; Insulin; Glucose homeostasis; Disease; Bioinformatics; Biology; Biochemistry; Insulin resistance","score_opus":0.05191728015077023,"score_gpt":0.3455816133837177,"score_spread":0.29366433323294744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2145063435","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99492335,0.0010187958,0.0013459201,0.0019387609,0.00049220666,0.0001564921,0.00001188142,0.0000023421599,0.000110260546],"genre_scores_gemma":[0.9853627,0.0008720679,0.011060177,0.0016652084,0.00078175764,0.000013569977,0.000010669395,0.000011767508,0.00022209182],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99867606,0.00010280322,0.0008066575,0.00015141079,0.000116282754,0.00014678459],"domain_scores_gemma":[0.9984128,0.0001160257,0.0007997153,0.00014467198,0.0003861553,0.00014065772],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010940573,0.000097710545,0.00029089453,0.000053906413,0.000057753008,0.000030071033,0.00013088727,0.00014188765,0.0000343331],"category_scores_gemma":[0.0026489284,0.00007335853,0.00028395985,0.00007119535,0.00012585736,0.000011747168,0.000037881735,0.00012656325,0.000009134812],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060407976,0.000079812,0.34647682,0.000023314566,0.00049600773,2.588538e-7,0.000030248697,0.0000023964992,0.54626536,0.00010781663,0.08700942,0.0194481],"study_design_scores_gemma":[0.001981659,0.0016435743,0.590692,0.000029744917,0.00021546018,0.0000039179067,0.000045800924,0.00058916083,0.31563362,0.017203938,0.071728654,0.00023247143],"about_ca_topic_score_codex":0.0000028983602,"about_ca_topic_score_gemma":0.0000017127745,"teacher_disagreement_score":0.24421516,"about_ca_system_score_codex":0.00000487613,"about_ca_system_score_gemma":0.000065485736,"threshold_uncertainty_score":0.3171206},"labels":[],"label_agreement":null},{"id":"W2145142784","doi":"10.1172/jci60214","title":"Equilibrative nucleoside transporter 1 (ENT1) regulates postischemic blood flow during acute kidney injury in mice","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Adenosine and Purinergic Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":106,"is_retracted":true,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; University of Colorado Denver; National Cancer Institute; National Institutes of Health; Crohn's and Colitis Foundation; Crohn's and Colitis Foundation of America; Deutsche Forschungsgemeinschaft; National Center for Research Resources; American Heart Association","keywords":"Nucleoside; Acute kidney injury; Blood flow; Kidney; Medicine; Renal blood flow; Transporter; Pharmacology; Cardiology; Internal medicine; Chemistry; Gene; Biochemistry","score_opus":0.02201752202727856,"score_gpt":0.314859910932585,"score_spread":0.2928423889053064,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2145142784","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99818116,0.00049490394,0.00013950067,0.0007023594,0.00030301217,0.00007141335,0.000013267795,0.0000044805874,0.00008991027],"genre_scores_gemma":[0.9929778,0.0002396406,0.004445344,0.00079093076,0.0014005465,0.0000017861629,0.00005491522,0.000018804301,0.00007022812],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982408,0.00013910678,0.0010810798,0.00015405561,0.00016730068,0.00021759947],"domain_scores_gemma":[0.99887556,0.00004015929,0.000543984,0.00012055778,0.00008690101,0.00033282704],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006524367,0.00013660174,0.00028572447,0.00006797493,0.000031609197,0.000015414238,0.00015136568,0.00023516401,0.000027970103],"category_scores_gemma":[0.0004608327,0.000118546275,0.00018335527,0.00011021511,0.00010283894,0.00005633201,0.000033281787,0.0003253101,0.0000027213728],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029669463,0.000107616026,0.13538645,0.000017122427,0.00014172691,0.000012477135,0.00017142022,0.0000385144,0.8615446,0.000013288956,0.002169165,0.00010093727],"study_design_scores_gemma":[0.0014250617,0.00033131117,0.08763364,0.00015199301,0.00016076412,0.000099006495,0.000024706475,0.00007640494,0.9092411,0.00021977567,0.00047191352,0.00016431976],"about_ca_topic_score_codex":0.0000030272327,"about_ca_topic_score_gemma":4.5229945e-7,"teacher_disagreement_score":0.047752813,"about_ca_system_score_codex":0.000006550263,"about_ca_system_score_gemma":0.00014210818,"threshold_uncertainty_score":0.4834177},"labels":[],"label_agreement":null},{"id":"W2145444267","doi":"10.1172/jci25888","title":" B-Crystallin is a novel oncoprotein that predicts poor clinical outcome in breast cancer","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Heat shock proteins research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":272,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Cancer Institute; National Institutes of Health; Michael Smith Health Research BC; Avon Foundation for Women; National Institute of Diabetes and Digestive and Kidney Diseases; U.S. Department of Defense","keywords":"Cancer research; MAPK/ERK pathway; Gene silencing; Biology; Breast cancer; Phenotype; Heat shock protein; Basal (medicine); Cancer; Kinase; Cell biology; Gene; Endocrinology; Genetics","score_opus":0.14144767068136457,"score_gpt":0.4501962148000962,"score_spread":0.30874854411873165,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2145444267","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97217494,0.00025288583,0.0010074229,0.025821187,0.0003005161,0.00031122263,0.000038153652,0.0000053750387,0.00008829122],"genre_scores_gemma":[0.985343,0.0006417019,0.0056579015,0.0050097294,0.0029195994,0.000016001502,0.0000105223535,0.000027785227,0.00037377083],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9957636,0.00045203144,0.0025113106,0.00034912757,0.00060784485,0.0003160617],"domain_scores_gemma":[0.9978375,0.00016417314,0.0008053528,0.00029680756,0.00039991856,0.0004962471],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0054583466,0.00017227836,0.0005435451,0.00011894288,0.00004010327,0.000038656097,0.00038955064,0.0005434698,0.00010580404],"category_scores_gemma":[0.0022162327,0.00014224906,0.0003595427,0.00017717837,0.00029560234,0.000037322767,0.00012738488,0.0009880593,0.000016750215],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00067570823,0.0005180489,0.90144956,0.00003605898,0.00010565647,0.000012289377,0.000040312152,0.00023869552,0.05817074,0.000016720074,0.006615137,0.032121092],"study_design_scores_gemma":[0.0069077304,0.001123577,0.8917977,0.00033637692,0.000048047965,0.00010836718,0.000036047124,0.0028649648,0.039844766,0.00025216345,0.056339104,0.00034112675],"about_ca_topic_score_codex":0.0000709297,"about_ca_topic_score_gemma":0.00014306036,"teacher_disagreement_score":0.049723968,"about_ca_system_score_codex":0.00007070893,"about_ca_system_score_gemma":0.0009825593,"threshold_uncertainty_score":0.58007485},"labels":[],"label_agreement":null},{"id":"W2145592052","doi":"10.1172/jci28214","title":"Constraints in antigen presentation severely restrict T cell recognition of the allogeneic fetus","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Reproductive System and Pregnancy","field":"Immunology and Microbiology","cited_by":225,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; School of Medicine, New York University; York University","keywords":"Fetus; Antigen; Immunology; Presentation (obstetrics); Antigen presentation; Biology; Medicine; Pregnancy; T cell; Obstetrics; Immune system; Genetics","score_opus":0.09397941538509402,"score_gpt":0.3562095445659185,"score_spread":0.2622301291808245,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2145592052","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953716,0.0012734947,0.0002267287,0.00026139116,0.0015594205,0.0002085516,0.0000048543757,0.0000033509077,0.0010906513],"genre_scores_gemma":[0.999179,0.0001268049,0.00034537772,0.00007709026,0.0001269359,7.8212275e-7,0.000009124253,0.0000051539723,0.00012970064],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9971994,0.0008662735,0.0015944096,0.00013314973,0.00008222409,0.00012454059],"domain_scores_gemma":[0.99729246,0.00063860364,0.0015886844,0.0001487466,0.0003036995,0.000027811111],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0037758504,0.00007557818,0.00028692756,0.00011068538,0.000037900514,0.0000046790706,0.00015134833,0.00023168215,0.000043809072],"category_scores_gemma":[0.0017550716,0.00005182261,0.00015487234,0.00022625527,0.00038375286,0.00014542528,0.000020834901,0.00038614412,0.000019119745],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017960653,0.000118330994,0.84153676,0.000029112929,0.000049297098,0.0000047653384,0.00038262657,0.00002239059,0.14206494,0.00004680702,0.0005353337,0.015030023],"study_design_scores_gemma":[0.0010464696,0.00016912236,0.80607766,0.00019426669,0.000024254234,0.000047538553,0.00013165163,5.851961e-7,0.18938029,0.0026836167,0.0001972775,0.000047250996],"about_ca_topic_score_codex":0.000029718716,"about_ca_topic_score_gemma":0.000019853713,"teacher_disagreement_score":0.047315344,"about_ca_system_score_codex":0.000020239237,"about_ca_system_score_gemma":0.00018741222,"threshold_uncertainty_score":0.21132648},"labels":[],"label_agreement":null},{"id":"W2145808065","doi":"10.1172/jci36245","title":"Deletion of GSK-3β in mice leads to hypertrophic cardiomyopathy secondary to cardiomyoblast hyperproliferation","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cardiomyopathy and Myosin Studies","field":"Medicine","cited_by":231,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"Canadian Institutes of Health Research; National Institutes of Health; National Heart, Lung, and Blood Institute; Paavo Nurmen Säätiö; American Heart Association","keywords":"Hypertrophic cardiomyopathy; Cardiomyopathy; Medicine; Internal medicine; Cancer research; Biology; Heart failure","score_opus":0.06492582164978884,"score_gpt":0.34089918651078366,"score_spread":0.27597336486099483,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2145808065","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99320185,0.0004511518,0.0008567944,0.0035402372,0.00081561966,0.00041255789,0.000007178519,0.000013633991,0.0007009469],"genre_scores_gemma":[0.99009657,0.00029193304,0.0058945753,0.0021751258,0.0014260941,0.000012299723,0.0000069197768,0.000021324928,0.00007512969],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9965284,0.00031720396,0.002043043,0.00025475235,0.0006458073,0.00021079146],"domain_scores_gemma":[0.99758774,0.000303371,0.00054429757,0.0002219505,0.00093235186,0.00041028435],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023300657,0.0001806826,0.0012452832,0.0004873523,0.00006814659,0.000010223263,0.00010589252,0.00018668796,0.000007534411],"category_scores_gemma":[0.003133269,0.00015802178,0.0004880808,0.00064525387,0.00017400837,0.00022554396,0.000053919564,0.0005515055,0.000020832964],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0032956055,0.00033348854,0.82440037,0.00023606842,0.00031820254,0.00056139805,0.0027280967,0.003164222,0.13143194,0.0001107373,0.009245855,0.024174036],"study_design_scores_gemma":[0.0032436706,0.0028232764,0.9655926,0.000627439,0.00027928254,0.0015966283,0.00023798521,0.00009952536,0.020754129,0.0002188851,0.0043040165,0.00022252563],"about_ca_topic_score_codex":0.00004537017,"about_ca_topic_score_gemma":0.000020773785,"teacher_disagreement_score":0.14119227,"about_ca_system_score_codex":0.00011378076,"about_ca_system_score_gemma":0.0005655105,"threshold_uncertainty_score":0.6443941},"labels":[],"label_agreement":null},{"id":"W2146136895","doi":"10.1172/jci14060","title":"Human sex hormone–binding globulin variants associated with hyperandrogenism and ovarian dysfunction","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Hormonal and reproductive studies","field":"Medicine","cited_by":112,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Institutes of Health Research; Western University","funders":"Canadian Institutes of Health Research; Fondation de France","keywords":"Sex hormone-binding globulin; Hyperandrogenism; Endocrinology; Internal medicine; Biology; Polycystic ovary; Proband; Androgen; Medicine; Mutation; Genetics; Insulin; Hormone; Gene; Insulin resistance","score_opus":0.10517156090991676,"score_gpt":0.338584032913545,"score_spread":0.23341247200362825,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2146136895","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948459,0.00053520856,0.00007217377,0.0031364986,0.0001736143,0.00012891882,0.0000017350097,0.000016090686,0.0010898128],"genre_scores_gemma":[0.9970462,0.00021539707,0.0007377011,0.00027908623,0.0008091017,0.0000013085877,0.0000035939931,0.000012677422,0.00089494867],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982514,0.00016535685,0.000878449,0.00019385671,0.0003773838,0.00013358211],"domain_scores_gemma":[0.9984989,0.00015515315,0.00066018465,0.000095824515,0.00035754874,0.00023237504],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015034075,0.00012168283,0.00053383614,0.000088606495,0.00016955328,0.000022875558,0.000038747065,0.00013709375,0.000025601666],"category_scores_gemma":[0.001555401,0.000078295685,0.000105115956,0.00018044369,0.00027125666,0.00018945489,0.000017664364,0.00047007803,0.0000069873713],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00088857306,0.0012318125,0.89653224,0.00006406251,0.002843164,0.0004626456,0.002459578,0.000029129424,0.06344236,0.00063738134,0.0066565652,0.024752462],"study_design_scores_gemma":[0.004730192,0.0026724818,0.9887113,0.00019941691,0.00046920835,0.00028861527,0.00017522044,0.00029242592,0.0005213429,0.0015188527,0.00030132526,0.0001195984],"about_ca_topic_score_codex":0.0000056247573,"about_ca_topic_score_gemma":0.0000028911745,"teacher_disagreement_score":0.09217905,"about_ca_system_score_codex":0.000039223207,"about_ca_system_score_gemma":0.00004396997,"threshold_uncertainty_score":0.31928053},"labels":[],"label_agreement":null},{"id":"W2146764867","doi":"10.1172/jci64551","title":"The TGR5 receptor mediates bile acid–induced itch and analgesia","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Drug Transport and Resistance Mechanisms","field":"Medicine","cited_by":374,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute of Diabetes and Digestive and Kidney Diseases; National Health and Medical Research Council; Monash University; U.S. Public Health Service; European Regional Development Fund; Regione Toscana; National Science Foundation; Istituto Italiano di Tecnologia; British Heart Foundation; Northern California Institute for Research and Education; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; National Institutes of Health","keywords":"G protein-coupled bile acid receptor; Agonist; Medicine; Pharmacology; Bile acid; Receptor; Stimulation; Cholecystokinin; Cholestasis; Chemistry; Internal medicine; Endocrinology","score_opus":0.05786368543612671,"score_gpt":0.34501343797492023,"score_spread":0.28714975253879355,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2146764867","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9774519,0.00053187803,0.00007818155,0.020771034,0.00079524494,0.00017443496,5.8712675e-7,0.000010450842,0.00018626255],"genre_scores_gemma":[0.9939304,0.0010047647,0.0029938305,0.0008621955,0.0008518989,0.000004387136,0.000003945325,0.00001173279,0.00033684095],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982291,0.00010546324,0.0010680021,0.00010836113,0.000351699,0.00013740492],"domain_scores_gemma":[0.9981459,0.00043613047,0.00057284796,0.00013092322,0.0003503595,0.000363883],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016707926,0.00009262399,0.00034653317,0.000050414536,0.00009727008,0.000043364013,0.00009216787,0.00014528957,0.00009950835],"category_scores_gemma":[0.0010435791,0.000048489794,0.00015004384,0.00012754934,0.00019581022,0.00018467869,0.000008845771,0.00043863535,0.000029828449],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007145605,0.00030150104,0.42785957,0.00016249367,0.00050167623,0.000047765705,0.0008136667,0.0000023941957,0.39183357,0.002907255,0.032196444,0.1426591],"study_design_scores_gemma":[0.0029467586,0.0010848367,0.906044,0.00041824518,0.00028693237,0.000057261383,0.00067102636,0.000325955,0.05760968,0.01889307,0.011482371,0.00017987058],"about_ca_topic_score_codex":0.0000079871725,"about_ca_topic_score_gemma":0.000008321763,"teacher_disagreement_score":0.47818443,"about_ca_system_score_codex":0.000014509988,"about_ca_system_score_gemma":0.00017032876,"threshold_uncertainty_score":0.19773564},"labels":[],"label_agreement":null},{"id":"W2147779090","doi":"10.1172/jci13171","title":"Accelerated apoptosis in the Timp-3–deficient mammary gland","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Protease and Inhibitor Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":166,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Muscular Dystrophy Canada; Ontario Institute for Cancer Research; University of Toronto","funders":"Medical Research and Materiel Command; Canadian Institutes of Health Research; U.S. Army; University of Toronto","keywords":"Involution (esoterism); Mammary gland; Internal medicine; Endocrinology; Apoptosis; Biology; Lactation; Epithelium; Adipose tissue; Programmed cell death; Medicine","score_opus":0.07623519592758732,"score_gpt":0.3524158687825455,"score_spread":0.2761806728549582,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2147779090","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957715,0.00021997005,0.001055548,0.0021160706,0.00028008735,0.00008934026,7.927117e-7,0.0000019361535,0.00046469847],"genre_scores_gemma":[0.9957393,0.00038014093,0.000699698,0.0024692083,0.0006359989,0.0000030197414,0.000012523791,0.0000050890294,0.000055050587],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986571,0.0002644576,0.0006821724,0.00010807307,0.00018389654,0.00010428127],"domain_scores_gemma":[0.99925303,0.00004776977,0.0003455853,0.00015637996,0.0001206295,0.00007659109],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017176842,0.00006973513,0.00014413551,0.00003906502,0.000032357293,0.000033516804,0.00021587001,0.0001412598,0.000007665641],"category_scores_gemma":[0.0006039755,0.000045003868,0.00011147045,0.00013426656,0.000046408382,0.000014049295,0.000029192375,0.00022301139,0.000004277094],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005806886,0.0005709295,0.06279243,0.000019606267,0.00009523814,0.00005742865,0.00021055219,0.0002446166,0.88510716,0.0009741895,0.029090604,0.020256564],"study_design_scores_gemma":[0.0033343295,0.0027099026,0.04754153,0.00013047033,0.00006067311,0.00024302631,0.00015930898,0.0007295911,0.886772,0.010865836,0.047153357,0.0003000209],"about_ca_topic_score_codex":0.0000043049745,"about_ca_topic_score_gemma":0.0000033441083,"teacher_disagreement_score":0.019956544,"about_ca_system_score_codex":0.0000062427553,"about_ca_system_score_gemma":0.00011781906,"threshold_uncertainty_score":0.18352045},"labels":[],"label_agreement":null},{"id":"W2147888714","doi":"10.1172/jci43910","title":"Activation of multiple signaling pathways causes developmental defects in mice with a Noonan syndrome–associated Sos1 mutation","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Protein Tyrosine Phosphatases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":133,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Ontario Institute for Cancer Research","funders":"National Cancer Institute; National Heart, Lung, and Blood Institute; National Institutes of Health; Fondation Leducq; Howard Hughes Medical Institute","keywords":"Noonan syndrome; Guanine nucleotide exchange factor; Mutation; Biology; Mutant; Phenotype; Signal transduction; Genetics; MAPK/ERK pathway; Cancer research; Costello syndrome; Positional cloning; Cell biology; Gene; KRAS","score_opus":0.039485926870494736,"score_gpt":0.298727465877662,"score_spread":0.2592415390071673,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2147888714","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989944,0.00006523015,0.00060027716,0.00006543874,0.00010331135,0.00015202092,0.0000089251635,0.0000036499398,0.0000067305537],"genre_scores_gemma":[0.98900676,0.0000104832725,0.010677135,0.00011127406,0.00007638364,0.000005192292,0.00009682501,0.000012964056,0.000002994239],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99851066,0.0001359806,0.00087801844,0.00014385999,0.00022207013,0.00010941446],"domain_scores_gemma":[0.9981849,0.00022294837,0.0011199587,0.00007136957,0.0003130779,0.000087745815],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010164037,0.000101157435,0.00023854557,0.00007815658,0.000030978706,0.000013703856,0.00010736925,0.00018169885,0.0000038180515],"category_scores_gemma":[0.0050558415,0.00008676561,0.00006945958,0.00015889788,0.00012268225,0.000034765457,0.00002452547,0.0002758762,7.909413e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019931645,0.000113027876,0.19103965,0.000016360887,0.000041635074,0.000011280501,0.00006479442,0.00029941948,0.80761534,0.00003804172,0.000027903436,0.0005332384],"study_design_scores_gemma":[0.0012766956,0.00054937677,0.23669338,0.00014797779,0.000017844399,0.000044302265,0.000047664525,0.00010826015,0.760675,0.00034129727,0.000016021833,0.000082150014],"about_ca_topic_score_codex":0.000040342697,"about_ca_topic_score_gemma":0.00024648078,"teacher_disagreement_score":0.046940308,"about_ca_system_score_codex":0.000023978435,"about_ca_system_score_gemma":0.0004653757,"threshold_uncertainty_score":0.60526794},"labels":[],"label_agreement":null},{"id":"W2148418288","doi":"10.1172/jci15883","title":"EphB6 crosslinking results in costimulation of T cells","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Axon Guidance and Neuronal Signaling","field":"Neuroscience","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Notre-Dame; Centre Hospitalier de l’Université de Montréal","funders":"Canadian Institutes of Health Research; Heart And Stroke Foundation Of Quebec; Roche Organ Transplant Research Foundation; Kidney Foundation of Canada; Heart and Stroke Foundation of Canada","keywords":"CD28; T cell; Biology; T-cell receptor; Cell biology; Immunology; Immune system","score_opus":0.27908655831452694,"score_gpt":0.4060633871174051,"score_spread":0.12697682880287814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2148418288","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977353,0.000041148185,0.00029579914,0.0008439417,0.00047825326,0.00007805113,0.0000027311778,0.0000060647462,0.0005187099],"genre_scores_gemma":[0.99773395,0.00014934083,0.00087529526,0.0009104698,0.00027569628,3.8541748e-7,3.54618e-7,0.0000065296804,0.000047954225],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9966168,0.0003720273,0.0022731065,0.00016791931,0.0004431261,0.00012705967],"domain_scores_gemma":[0.9955531,0.002328279,0.0017636492,0.00011127575,0.0001355077,0.00010822762],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019041692,0.00007952439,0.00031247502,0.00013499125,0.000039603892,0.00002160311,0.00018100369,0.00010697739,0.000027781673],"category_scores_gemma":[0.008039328,0.00006909807,0.00013281392,0.00033936862,0.0001836912,0.00040490337,0.000021398919,0.0004390861,0.00001548444],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047256678,0.00028400787,0.029091444,0.000031018535,0.000005611021,0.00007167584,0.0006240303,0.02549227,0.923839,0.00055546407,0.0010159287,0.018516986],"study_design_scores_gemma":[0.003277929,0.00074404036,0.04800917,0.0004592251,0.00001964962,0.000021598687,0.000019578169,0.054219224,0.8850076,0.006685287,0.001385204,0.00015146604],"about_ca_topic_score_codex":0.0000041885523,"about_ca_topic_score_gemma":0.0000020657008,"teacher_disagreement_score":0.038831364,"about_ca_system_score_codex":0.000020168087,"about_ca_system_score_gemma":0.000045955425,"threshold_uncertainty_score":0.9624407},"labels":[],"label_agreement":null},{"id":"W2149075421","doi":"10.1172/jci19711","title":"Antigen-specific CD4+ T cells drive airway smooth muscle remodeling in experimental asthma","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Asthma and respiratory diseases","field":"Medicine","cited_by":125,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Christie (Canada)","funders":"Canadian Institutes of Health Research; European Respiratory Society; McGill University; GlaxoSmithKline; Lady Davis Institute for Medical Research; Canadian Lung Association; AstraZeneca","keywords":"Asthma; Antigen; Immunology; Airway; Medicine; Anesthesia","score_opus":0.06677688969783094,"score_gpt":0.36745949303800607,"score_spread":0.30068260334017516,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149075421","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99519646,0.0020338725,0.00035596336,0.0014108971,0.00045648988,0.00014713705,0.0000012082756,0.000014108943,0.0003838362],"genre_scores_gemma":[0.988339,0.00064066827,0.007315111,0.001639517,0.0019871003,0.0000013751467,0.0000035900991,0.000020233667,0.000053418542],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9972883,0.00019902077,0.0016765575,0.00019887542,0.0004514225,0.00018581536],"domain_scores_gemma":[0.9983407,0.00017341287,0.0006682188,0.00016873778,0.00019942284,0.00044950267],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010769073,0.00013745298,0.0004833363,0.00017599302,0.00004946684,0.000023406408,0.00010586605,0.00016895554,0.00014350051],"category_scores_gemma":[0.0002704755,0.000109053966,0.00029555545,0.00017598942,0.00019566454,0.00032414676,0.000023985502,0.0005255003,0.000051252042],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013052239,0.0026798584,0.12546192,0.000048018042,0.00006889638,0.00039553537,0.0017561245,0.0067877206,0.4640595,0.00020889551,0.013364576,0.38386372],"study_design_scores_gemma":[0.008166663,0.0022556763,0.58899367,0.0010342472,0.000032639797,0.000056425688,0.0013209198,0.0099483365,0.13626595,0.0003262791,0.25120795,0.00039124925],"about_ca_topic_score_codex":0.000002685576,"about_ca_topic_score_gemma":0.0000031115974,"teacher_disagreement_score":0.46353176,"about_ca_system_score_codex":0.00008874897,"about_ca_system_score_gemma":0.00031034683,"threshold_uncertainty_score":0.44470915},"labels":[],"label_agreement":null},{"id":"W2149268046","doi":"10.1172/jci59211","title":"Loss of memory B cells during chronic HIV infection is driven by Foxo3a- and TRAIL-mediated apoptosis","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"FOXO transcription factor regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":100,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Saint-Luc; McGill University; Centre Hospitalier de l’Université de Montréal","funders":"National Institute on Drug Abuse; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Genome Canada","keywords":"Gene silencing; Immunology; Apoptosis; Immune system; Biology; Cancer research; Medicine; Genetics; Gene","score_opus":0.03891366200977273,"score_gpt":0.29033349792038343,"score_spread":0.2514198359106107,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149268046","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99852794,0.00019094841,0.0007076613,0.00015651635,0.00026562682,0.00008870013,0.000014372175,0.000004741501,0.00004347483],"genre_scores_gemma":[0.9983849,0.00058191794,0.00062150887,0.00008538278,0.00021355962,0.0000013452775,0.000030592124,0.000012368054,0.00006842217],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99855465,0.0001380841,0.0008911737,0.00015299849,0.00016658353,0.00009651168],"domain_scores_gemma":[0.99876165,0.000030266938,0.0007565156,0.00011568328,0.00019625308,0.00013964405],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004357852,0.00010021529,0.00022921855,0.000062951134,0.000031776643,0.000008430009,0.00007180073,0.00022926636,0.000038273593],"category_scores_gemma":[0.00016862803,0.0000933453,0.00014576734,0.00007513568,0.00023302081,0.000031027706,0.000015411564,0.0001668733,0.0000030166316],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001115716,0.00006095058,0.07383592,0.000046950398,0.00007244481,3.4379627e-7,0.00014389295,0.000036971942,0.9241907,0.0000040573373,0.00086039875,0.0006357798],"study_design_scores_gemma":[0.0011043979,0.0005047583,0.20539881,0.000046153305,0.00005308956,0.000006653845,0.0000102151935,0.00012955899,0.7921586,0.000105599516,0.00039989554,0.00008225104],"about_ca_topic_score_codex":0.00001123976,"about_ca_topic_score_gemma":0.000006890526,"teacher_disagreement_score":0.13203211,"about_ca_system_score_codex":0.000017910836,"about_ca_system_score_gemma":0.00008816646,"threshold_uncertainty_score":0.3806511},"labels":[],"label_agreement":null},{"id":"W2149526310","doi":"10.1172/jci21686","title":"Rescue of retinal degeneration by intravitreally injected adult bone marrow–derived lineage-negative hematopoietic stem cells","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Retinal Development and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":307,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Eye Institute; University of California, San Diego; University of British Columbia","keywords":"Retinal degeneration; Retinal; Biology; Retina; Haematopoiesis; Stem cell; Macular degeneration; Bone marrow; Pathology; Cell biology; Anatomy; Neuroscience; Immunology; Medicine; Ophthalmology","score_opus":0.020181582217655994,"score_gpt":0.2911737099127938,"score_spread":0.2709921276951378,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149526310","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99557024,0.00017383655,0.0028935391,0.00085653557,0.00024045604,0.00014294522,0.000007555754,0.0000048144925,0.00011008743],"genre_scores_gemma":[0.9891509,0.00040788823,0.009572239,0.00045528557,0.00024169928,0.0000027943074,0.000059972986,0.000014025122,0.00009519965],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99751884,0.0002472031,0.0015651002,0.00020710794,0.0003169067,0.00014484298],"domain_scores_gemma":[0.99772835,0.00007355794,0.0011025195,0.00014654131,0.0007724494,0.00017656556],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008625126,0.0001539268,0.00036720658,0.00006355644,0.000046894653,0.000022578457,0.00015405357,0.0002595463,0.000007769323],"category_scores_gemma":[0.0007851424,0.00013384417,0.00018333954,0.00014798366,0.00023734127,0.000021567486,0.000034097768,0.0002511113,0.000003216693],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005632774,0.00013927894,0.004757665,0.000036045156,0.00006583716,0.000005712088,0.00022410002,0.00033116253,0.99042624,0.0001156577,0.0021117998,0.0012232411],"study_design_scores_gemma":[0.002100776,0.001164722,0.00713516,0.0001426585,0.000049972135,0.000022499675,0.00017733665,0.00003850927,0.98781633,0.0010592513,0.00014049099,0.0001522791],"about_ca_topic_score_codex":0.000021250278,"about_ca_topic_score_gemma":0.000033644475,"teacher_disagreement_score":0.0066786995,"about_ca_system_score_codex":0.000020553392,"about_ca_system_score_gemma":0.00043400106,"threshold_uncertainty_score":0.5458007},"labels":[],"label_agreement":null},{"id":"W2149529721","doi":"10.1172/jci72241","title":"Prion disease tempo determined by host-dependent substrate reduction","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Prion Diseases and Protein Misfolding","field":"Biochemistry, Genetics and Molecular Biology","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute of Neurological Disorders and Stroke; Alberta Prion Research Institute; Centers for Disease Control and Prevention; U.S. Public Health Service; Canadian Institutes of Health Research; Alberta Innovates; Cleveland Clinic","keywords":"Downregulation and upregulation; Scrapie; Biology; Pathogenesis; Glycoprotein; Virology; Glycosylation; Chronic wasting disease; In vitro; Disease; Cell biology; Prion protein; Immunology; Molecular biology; Genetics; Gene; Medicine; Pathology","score_opus":0.03350529041783667,"score_gpt":0.3366516527672306,"score_spread":0.3031463623493939,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149529721","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952237,0.0010365774,0.002129718,0.000989807,0.0004766397,0.00010305604,0.0000055620394,0.000005519495,0.000029410965],"genre_scores_gemma":[0.99653506,0.0010411434,0.0007445954,0.00038116783,0.0011523535,0.0000030743781,0.000038061396,0.000012392997,0.00009214329],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983422,0.00031154728,0.00082475686,0.00018160733,0.0002225636,0.000117333795],"domain_scores_gemma":[0.99844265,0.0000415689,0.0007471308,0.0001818397,0.0001843265,0.00040245758],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013994034,0.00010148251,0.00018013519,0.000032359214,0.000056342644,0.000039592385,0.00014473083,0.00012871393,0.000013378833],"category_scores_gemma":[0.0015932993,0.000087668304,0.00019244716,0.00004703468,0.00008872073,0.000020252342,0.000029796553,0.00016237766,0.0000051329516],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007014664,0.00014103469,0.04638345,0.000040143826,0.000066559136,0.0000036610224,0.000015610209,0.0001243771,0.8993078,0.00007167387,0.006478353,0.046665896],"study_design_scores_gemma":[0.0056480765,0.0034626229,0.30973035,0.00035691104,0.00038058488,0.00007296563,0.000065065426,0.002024596,0.6020805,0.008331456,0.06705059,0.0007962411],"about_ca_topic_score_codex":0.0000028891075,"about_ca_topic_score_gemma":9.828107e-7,"teacher_disagreement_score":0.29722723,"about_ca_system_score_codex":0.00001057927,"about_ca_system_score_gemma":0.00015652987,"threshold_uncertainty_score":0.35750097},"labels":[],"label_agreement":null},{"id":"W2149545030","doi":"10.1172/jci7456","title":"Regulation of pancreatic PC1 and PC2 associated with increased glucagon-like peptide 1 in diabetic rats","year":2000,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Diabetes Treatment and Management","field":"Medicine","cited_by":168,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"American Diabetes Association; Medical Research Council; Medical Research Council Canada; Cedars-Sinai Medical Center; National Institute on Drug Abuse; Canadian Diabetes Association","keywords":"Proglucagon; Glucagon; Internal medicine; Endocrinology; Proinsulin; Insulin; Streptozotocin; Prohormone; Pancreas; Glucagon-like peptide-1; Pancreatic polypeptide; Islet; Prohormone convertase; Pancreatic hormone; Biology; Chemistry; Diabetes mellitus; Medicine; Hormone; Type 2 diabetes; Insulin resistance","score_opus":0.03856143132473881,"score_gpt":0.3108096892421192,"score_spread":0.2722482579173804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149545030","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983422,0.000145503,0.0000065714726,0.0006028262,0.000045416447,0.00023663625,9.589405e-7,0.000007732755,0.00061213796],"genre_scores_gemma":[0.9977008,0.0002021148,0.0011522986,0.0003750322,0.00006994062,0.0000034974323,0.000022553344,0.000010691852,0.00046304442],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99821794,0.00020573054,0.0010394241,0.000116878335,0.00030507508,0.00011495274],"domain_scores_gemma":[0.99847734,0.0004571455,0.00064432604,0.000111547066,0.00014478067,0.00016487016],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010788483,0.00010183336,0.00054881343,0.00013739537,0.00001750025,0.000012216652,0.000038780952,0.000088465735,0.00007054904],"category_scores_gemma":[0.0006168214,0.00007314985,0.00007792643,0.00023719446,0.00015885496,0.0001849776,0.0000075696666,0.00017059116,0.0000028760637],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00051292527,0.00044045958,0.98029333,0.00007862168,0.00029951253,0.000022221286,0.00013922536,0.00008892067,0.0017713581,0.000054605058,0.00045835233,0.015840465],"study_design_scores_gemma":[0.0046116826,0.0015429995,0.98868537,0.0010836152,0.0005434663,0.000004169334,0.000031039795,0.001048715,0.0010022171,0.0011932425,0.0001877003,0.00006575703],"about_ca_topic_score_codex":0.000025342777,"about_ca_topic_score_gemma":0.000019778636,"teacher_disagreement_score":0.015774708,"about_ca_system_score_codex":0.000048247053,"about_ca_system_score_gemma":0.000112077636,"threshold_uncertainty_score":0.29829645},"labels":[],"label_agreement":null},{"id":"W2149578816","doi":"10.1172/jci24186","title":"Lack of MEF2A mutations in coronary artery disease","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cardiovascular, Neuropeptides, and Oxidative Stress Research","field":"Medicine","cited_by":107,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Thrombosis and Atherosclerosis Research Institute","funders":"Joint Genome Institute; Canadian Institutes of Health Research; Lawrence Berkeley National Laboratory; University of Ottawa; Heart and Stroke Foundation of Canada; U.S. Department of Energy","keywords":"Proband; Coronary artery disease; Genetics; CAD; Genotyping; Mutation; Coding region; Biology; Medicine; Internal medicine; Genotype; Gene","score_opus":0.20520920108308602,"score_gpt":0.4549021402352849,"score_spread":0.2496929391521989,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149578816","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99497515,0.00045450224,0.00013772331,0.0036217005,0.000116575815,0.00015373649,0.0000053923313,0.0000043876153,0.000530819],"genre_scores_gemma":[0.9965923,0.0004678329,0.0015353657,0.0005854986,0.0006130845,0.000001991354,0.000011955601,0.000010278303,0.00018173885],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997514,0.00037132777,0.0013201413,0.000119316894,0.00056093576,0.00011425419],"domain_scores_gemma":[0.9980522,0.000551006,0.00040459176,0.00017779032,0.00043857258,0.00037584652],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014983566,0.0000748031,0.00045995673,0.00019822127,0.000018247327,0.000009067605,0.000081544735,0.000059394868,0.000074127005],"category_scores_gemma":[0.0039374577,0.00006013023,0.00038397723,0.0002163936,0.00032235318,0.00023388249,0.00002247477,0.00046733953,0.000016167647],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012657315,0.000632508,0.93443924,0.0001421223,0.0002742412,0.00054667983,0.00026805716,0.0014718121,0.0033175112,0.00023079736,0.0024721208,0.054939155],"study_design_scores_gemma":[0.0025493521,0.0003497006,0.99162203,0.00031266324,0.00013104819,0.000076240474,0.000058844584,0.0008711458,0.0012104874,0.000869906,0.001896807,0.00005176618],"about_ca_topic_score_codex":0.000004032005,"about_ca_topic_score_gemma":0.000010067493,"teacher_disagreement_score":0.057182774,"about_ca_system_score_codex":0.000035683846,"about_ca_system_score_gemma":0.00044201897,"threshold_uncertainty_score":0.4713789},"labels":[],"label_agreement":null},{"id":"W2149694801","doi":"10.1172/jci43737","title":"Hedgehog/Notch-induced premature gliogenesis represents a new disease mechanism for Hirschsprung disease in mice and humans","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Congenital gastrointestinal and neural anomalies","field":"Medicine","cited_by":78,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"Medical Research Council; University of Hong Kong","keywords":"Gliogenesis; Biology; Notch signaling pathway; Hedgehog; Patched; PTCH1; GLI2; Neural crest; Smoothened; Decussation; Enteric nervous system; Neuroscience; Hedgehog signaling pathway; Neurogenesis; Genetics; Cell biology; Neural stem cell; Signal transduction; Stem cell; Gene","score_opus":0.17134355207433016,"score_gpt":0.36753075080787856,"score_spread":0.1961871987335484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149694801","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99496317,0.00025487505,0.00013504016,0.0039894744,0.0002278884,0.00037892046,0.0000060073435,0.000013211279,0.000031392985],"genre_scores_gemma":[0.99335396,0.000068272646,0.0046356623,0.0008917624,0.0005556198,0.0000071885697,0.0000048170978,0.000016324493,0.00046639013],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982092,0.000098591605,0.0010540179,0.00023406785,0.00024083369,0.00016331296],"domain_scores_gemma":[0.9977415,0.00027083998,0.0005119175,0.0001406949,0.00028973084,0.001045285],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004828008,0.00014755313,0.00043061783,0.00013129767,0.00004166092,0.000019492449,0.000095277835,0.000076482625,0.000016823493],"category_scores_gemma":[0.0041778493,0.00011069985,0.0002544848,0.00012817043,0.00008380402,0.00024338445,0.00004298412,0.00027692318,0.0000022737413],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011149941,0.0005851817,0.9186682,0.00048459295,0.00012727997,0.0005808066,0.00050586456,0.0000029358857,0.05887881,0.001826216,0.0007194897,0.006470676],"study_design_scores_gemma":[0.0026325632,0.0010567161,0.95157546,0.00079598936,0.00044474434,0.00005901468,0.000049207167,0.0005712656,0.005545588,0.037099235,0.00004176053,0.0001284528],"about_ca_topic_score_codex":0.00003450264,"about_ca_topic_score_gemma":0.00002423805,"teacher_disagreement_score":0.053333223,"about_ca_system_score_codex":0.000018217232,"about_ca_system_score_gemma":0.0002728205,"threshold_uncertainty_score":0.5001578},"labels":[],"label_agreement":null},{"id":"W2150105325","doi":"10.1172/jci18589","title":"A homozygous mutation in HESX1 is associated with evolving hypopituitarism due to impaired repressor-corepressor interaction","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Growth Hormone and Insulin-like Growth Factors","field":"Medicine","cited_by":136,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"Medical Research Council; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Fundação de Amparo à Pesquisa do Estado de São Paulo; Wellcome Trust","keywords":"Biology; Hypopituitarism; Haploinsufficiency; Genetics; Forebrain; Corepressor; Endocrinology; Repressor; Phenotype; Gene; Transcription factor","score_opus":0.06938387433390723,"score_gpt":0.3538282214987097,"score_spread":0.28444434716480244,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150105325","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958666,0.000103858576,0.0006363244,0.0018464905,0.0005006976,0.00038648807,0.0000023437326,0.000027053495,0.00063016475],"genre_scores_gemma":[0.99452347,0.000024228948,0.0031095045,0.0019766088,0.00020369378,0.000009824254,0.000012543954,0.000029432425,0.000110676316],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9962838,0.0004505416,0.0020925463,0.00030666884,0.0006074921,0.00025893233],"domain_scores_gemma":[0.9963424,0.000757604,0.0013810649,0.00025623076,0.00080636994,0.00045628884],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0024184817,0.0001985665,0.00080529106,0.00040657516,0.0000618613,0.000051710696,0.000100229525,0.00028603792,0.000051866326],"category_scores_gemma":[0.0156083135,0.0001563447,0.00022091315,0.0006379575,0.0000929522,0.00068127265,0.000016499887,0.0009215301,0.000016727421],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003270917,0.0018777462,0.945161,0.00012005484,0.00084105035,0.0037100657,0.008332688,0.0009842779,0.008567126,0.00027070593,0.013055117,0.013809246],"study_design_scores_gemma":[0.00531395,0.003065674,0.97370434,0.0010016125,0.00029131304,0.0010720991,0.00044330076,0.0016044694,0.009845363,0.003072187,0.0003435737,0.00024213652],"about_ca_topic_score_codex":0.000076933204,"about_ca_topic_score_gemma":0.000035562072,"teacher_disagreement_score":0.028543316,"about_ca_system_score_codex":0.00021344694,"about_ca_system_score_gemma":0.0004101619,"threshold_uncertainty_score":0.99268365},"labels":[],"label_agreement":null},{"id":"W2150240056","doi":"10.1172/jci40115","title":"Global genomic analysis reveals rapid control of a robust innate response in SIV-infected sooty mangabeys","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":401,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"National Center for Research Resources; National Institute of Allergy and Infectious Diseases; National Heart, Lung, and Blood Institute; Yerkes National Primate Research Center, Emory University; National Institutes of Health; Canadian Institutes of Health Research; Li Ka Shing Foundation; Center for AIDS Research, University of Washington; Emory University; University of Pennsylvania","keywords":"Innate immune system; Immune system; Biology; Immunology; Simian immunodeficiency virus; Immunity; Downregulation and upregulation; Phenotype; Virology; Gene; Genetics","score_opus":0.05874832140545877,"score_gpt":0.3811057037450673,"score_spread":0.32235738233960853,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150240056","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995286,0.0001705167,0.0018964887,0.0020849085,0.00012720171,0.00021464094,0.000013968787,0.000010815337,0.00019546832],"genre_scores_gemma":[0.9964563,0.000101512596,0.0022674308,0.0009824433,0.00014593003,0.0000016629629,0.000008038074,0.00000588903,0.000030749758],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99631757,0.0009157559,0.002151488,0.00016128406,0.00029355448,0.00016034153],"domain_scores_gemma":[0.99717635,0.00060183054,0.0013000275,0.0002164623,0.0004331579,0.0002721644],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0038022297,0.00013176787,0.0009824532,0.00042448018,0.000031414253,0.000013788464,0.00007407391,0.0002079248,0.000065460816],"category_scores_gemma":[0.0036670621,0.00010295668,0.000513897,0.0011822104,0.00011956711,0.00014159671,0.000008340859,0.00033067662,0.000007697597],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004460801,0.0007444592,0.9735572,0.000012164341,0.0010692697,0.00011271594,0.00004877428,0.0030824763,0.0019910277,0.00008510923,0.00018165263,0.014654353],"study_design_scores_gemma":[0.006309541,0.0021151626,0.9856964,0.00013032607,0.001443645,0.000038770213,0.000011581728,0.0021643967,0.00017964854,0.0016281458,0.00020950686,0.00007290341],"about_ca_topic_score_codex":0.000038815197,"about_ca_topic_score_gemma":0.000024889612,"teacher_disagreement_score":0.014581449,"about_ca_system_score_codex":0.00018849754,"about_ca_system_score_gemma":0.00038346392,"threshold_uncertainty_score":0.4390081},"labels":[],"label_agreement":null},{"id":"W2150472993","doi":"10.1172/jci57256","title":"An anti-diabetes agent protects the mouse brain from defective insulin signaling caused by Alzheimer’s disease–associated Aβ oligomers","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Alzheimer's disease research and treatments","field":"Medicine","cited_by":824,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University; Simon Fraser University","funders":"Canadian Institutes of Health Research; Universidade Federal do Rio de Janeiro; National Institute on Aging; Instituto Nacional de Ciência e Tecnologia de Neurociência Translacional; Fundação Carlos Chagas Filho de Amparo à Pesquisa do Estado do Rio de Janeiro; Conselho Nacional de Desenvolvimento Científico e Tecnológico; T.L.L Temple Foundation; National Institutes of Health; John Simon Guggenheim Memorial Foundation; American Health Assistance Foundation; Alzheimer's Association","keywords":"Hippocampal formation; Insulin receptor; Phosphorylation; Endocrinology; Insulin resistance; Insulin; Diabetes mellitus; Internal medicine; Signal transduction; Hippocampus; Neuroscience; Medicine; Chemistry; Biology; Cell biology","score_opus":0.09846863438673782,"score_gpt":0.38965359070762073,"score_spread":0.2911849563208829,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150472993","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98870623,0.0073310924,0.000029398514,0.002905011,0.00017301812,0.0007193392,0.00009154403,0.000031949377,0.000012407991],"genre_scores_gemma":[0.99686384,0.00014434535,0.00020472895,0.0017544787,0.00072581245,0.000025820334,0.00023729142,0.000036974216,0.0000066992907],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9960189,0.0013399894,0.0010875389,0.00022545637,0.0008836114,0.00044454134],"domain_scores_gemma":[0.99512583,0.00127073,0.0009927202,0.0002816854,0.00042502853,0.0019039792],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023924767,0.00021933137,0.00057381904,0.00009744517,0.00017933828,0.00006141376,0.00017400213,0.00017139222,0.000060726175],"category_scores_gemma":[0.004106233,0.00014056485,0.00036405525,0.00025914816,0.00033160124,0.00055525993,0.000031086984,0.00070546346,0.000035036996],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004705451,0.0019678439,0.9752038,0.000015014752,0.0092754895,0.000038037088,0.0003746805,0.000049562725,0.0074742315,0.000011528181,0.0034229073,0.0016963243],"study_design_scores_gemma":[0.004332503,0.0011388571,0.9640782,0.00023134901,0.0024540068,0.000001627253,0.00016627731,0.00093070423,0.02538267,0.00093445403,0.0001530495,0.00019628988],"about_ca_topic_score_codex":0.000042886462,"about_ca_topic_score_gemma":0.0000030681206,"teacher_disagreement_score":0.017908439,"about_ca_system_score_codex":0.000109523935,"about_ca_system_score_gemma":0.00056967244,"threshold_uncertainty_score":0.57320684},"labels":[],"label_agreement":null},{"id":"W2150893441","doi":"10.1172/jci17423","title":"Glomerular-specific alterations of VEGF-A expression lead to distinct congenital and acquired renal diseases","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Renal Diseases and Glomerulopathies","field":"Medicine","cited_by":1278,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network; St. Michael's Hospital; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"National Institutes of Health; National Institute of Diabetes and Digestive and Kidney Diseases; Kidney Foundation of Canada","keywords":"Podocyte; Glomerulus; Kidney disease; Kidney; Renal function; Biology; Pathology; Glomerulopathy; Glomerulonephritis; Endocrinology; Internal medicine; Proteinuria; Medicine","score_opus":0.06626429097389486,"score_gpt":0.3621689072289696,"score_spread":0.29590461625507475,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150893441","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954664,0.0021273107,0.0008609982,0.0008742485,0.00028983442,0.0001746654,0.000023806602,0.000007818315,0.00017488457],"genre_scores_gemma":[0.99500436,0.0003544002,0.0038295249,0.00029861796,0.00039509908,0.0000034485963,0.00001530082,0.000011863179,0.00008740528],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977156,0.00023507066,0.0013366205,0.00016760854,0.00041907444,0.00012604379],"domain_scores_gemma":[0.99780303,0.0003714097,0.0006095848,0.00016742562,0.00042888612,0.00061966083],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005551567,0.00012384231,0.00051365595,0.00012780476,0.00006558067,0.00003199807,0.000056815883,0.000083577695,0.00005583735],"category_scores_gemma":[0.0031131047,0.0000907759,0.00023520076,0.00019459025,0.00027625856,0.0002269952,0.000020573203,0.00014651717,0.00000603854],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025192993,0.0010524153,0.80919844,0.00034878385,0.0002734005,0.00017361822,0.00058043696,0.00006877476,0.1481823,0.0023369666,0.011176384,0.024089167],"study_design_scores_gemma":[0.002596069,0.0016736484,0.96994394,0.00090442057,0.0003374404,0.00010184588,0.00017093474,0.000103623825,0.01630537,0.0030566137,0.004650107,0.00015598035],"about_ca_topic_score_codex":0.0000017280496,"about_ca_topic_score_gemma":0.0000012260134,"teacher_disagreement_score":0.1607455,"about_ca_system_score_codex":0.000017979362,"about_ca_system_score_gemma":0.00021271246,"threshold_uncertainty_score":0.3726902},"labels":[],"label_agreement":null},{"id":"W2151753166","doi":"10.1172/jci18784","title":"Small-intestinal dysfunction accompanies the complex endocrinopathy of human proprotein convertase 1 deficiency","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Diabetes Treatment and Management","field":"Medicine","cited_by":296,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Medical Research Council; National Institutes of Health; Ipsen; Vlaamse regering; Wellcome Trust","keywords":"Endocrinology; Internal medicine; Missense mutation; Nonsense mutation; Allele; Biology; Medicine; Phenotype; Genetics; Gene","score_opus":0.16691108186061038,"score_gpt":0.3650470267147205,"score_spread":0.19813594485411012,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2151753166","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99556875,0.00012840386,0.00038569415,0.0011245492,0.00026199227,0.00039673783,7.7636525e-7,0.000011676327,0.0021214015],"genre_scores_gemma":[0.9956851,0.000022052736,0.0033948144,0.00047797375,0.00015596596,0.0000064378346,0.000007991601,0.000008992657,0.00024069572],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99786353,0.0002568005,0.0012717022,0.00012023687,0.00034865653,0.00013908303],"domain_scores_gemma":[0.99795187,0.0002708772,0.0010630819,0.0001887582,0.00038864312,0.00013680218],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001467925,0.00011485951,0.00041935695,0.00009490399,0.000081770275,0.000020824109,0.00010457844,0.000044449152,0.00008699825],"category_scores_gemma":[0.0016904124,0.00006821451,0.0002142073,0.00014042864,0.00032036472,0.00011012117,0.00001926368,0.0002718969,0.00000955512],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004381687,0.0018582775,0.9050736,0.00036134679,0.00037820483,0.00008144328,0.0003927657,0.000061952596,0.032906797,0.02997913,0.0041472306,0.024321124],"study_design_scores_gemma":[0.006611973,0.0075456183,0.92059904,0.0005350628,0.001154758,0.00015018732,0.00059138733,0.0003669845,0.045907617,0.012598868,0.003761558,0.00017695448],"about_ca_topic_score_codex":0.000016511285,"about_ca_topic_score_gemma":0.0000068320446,"teacher_disagreement_score":0.024144169,"about_ca_system_score_codex":0.00003288813,"about_ca_system_score_gemma":0.00014769027,"threshold_uncertainty_score":0.2781707},"labels":[],"label_agreement":null},{"id":"W2152064427","doi":"10.1172/jci23002","title":"Genome-wide expression analysis of therapy-resistant tumors reveals SPARC as a novel target for cancer therapy","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Bone and Dental Protein Studies","field":"Medicine","cited_by":142,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"BC Cancer Agency; Canadian Institutes of Health Research; Canadian Association of Gastroenterology","keywords":"Osteonectin; Colorectal cancer; Irinotecan; Chemotherapy; Cancer research; Cancer; Radiation therapy; Radioresistance; Biology; Medicine; Internal medicine","score_opus":0.1331222086344916,"score_gpt":0.4209273055234882,"score_spread":0.28780509688899664,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152064427","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9886555,0.0046072463,0.0011606977,0.0049017146,0.000107926164,0.00041995954,0.000015882672,0.0000073872875,0.00012370739],"genre_scores_gemma":[0.9778204,0.0025735702,0.015634935,0.00285158,0.00078403496,0.00002142795,0.000010655464,0.00001602805,0.00028738915],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99725085,0.000099178775,0.0018675767,0.0001705034,0.00046416218,0.00014772147],"domain_scores_gemma":[0.9967581,0.0005969771,0.0016651843,0.00017404767,0.00059688743,0.00020877522],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017852127,0.00013592235,0.0010286657,0.00022307102,0.00006125655,0.000011920771,0.000100640595,0.00011750429,0.00011257423],"category_scores_gemma":[0.0012226654,0.000089287685,0.000654915,0.0003745953,0.0001808644,0.0001581927,0.000018326711,0.00024498653,0.0000016954981],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006392012,0.00083785574,0.3354831,0.000075032905,0.0030608855,0.000007944237,0.00070480467,0.00085519167,0.6390739,0.000077108314,0.0026104795,0.010821659],"study_design_scores_gemma":[0.0056404704,0.002459451,0.8781862,0.00043748977,0.00073403114,0.0000046571404,0.00015951727,0.00043972375,0.10018405,0.002467543,0.009137567,0.00014926023],"about_ca_topic_score_codex":0.000041415176,"about_ca_topic_score_gemma":0.000015124509,"teacher_disagreement_score":0.54270315,"about_ca_system_score_codex":0.000046017707,"about_ca_system_score_gemma":0.0002249864,"threshold_uncertainty_score":0.3641046},"labels":[],"label_agreement":null},{"id":"W2152791016","doi":"10.1172/jci18236","title":"Transplacental thyroxine and fetal brain development","year":2003,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Thyroid Disorders and Treatments","field":"Medicine","cited_by":78,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"McMaster University; Heart and Stroke Foundation of Canada","keywords":"Thyroid; Hormone; Endocrinology; Offspring; Internal medicine; Medicine; Fetus; Pregnancy; Transplacental; Thyroid function; Biology; Placenta","score_opus":0.15046347556549436,"score_gpt":0.4413786076902749,"score_spread":0.2909151321247806,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152791016","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.004821061,0.9936533,0.000058773483,0.0004038607,0.00040436414,0.0003693099,0.000004418328,0.000006917108,0.00027797456],"genre_scores_gemma":[0.00014752646,0.9930629,0.0053398567,0.00046778878,0.00025573585,0.00000453048,0.000057606012,0.00003076683,0.0006332784],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9967101,0.00027710714,0.00232135,0.00020330453,0.00034348818,0.00014463854],"domain_scores_gemma":[0.99758834,0.0004012901,0.0013521839,0.000117194155,0.000102002916,0.00043900035],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011766703,0.000265824,0.0019522717,0.0001473899,0.0000465501,0.000021441701,0.00006552265,0.00035663586,0.00003257075],"category_scores_gemma":[0.00050568563,0.00017319269,0.0005574985,0.000138841,0.00015190766,0.00009872701,0.000011965511,0.0006566318,0.000017547041],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005883401,0.00029589847,0.0017747846,0.0024612185,0.00067455857,0.000118279226,0.00005957605,8.1458005e-8,8.060213e-7,0.000048872567,0.0020700316,0.99243706],"study_design_scores_gemma":[0.0031243886,0.00067727244,0.0016933939,0.0076297726,0.001905738,0.00089312764,0.000013257151,0.0000017500977,0.0000038091916,0.0001565221,0.98373765,0.00016332144],"about_ca_topic_score_codex":9.660073e-7,"about_ca_topic_score_gemma":0.0000019768142,"teacher_disagreement_score":0.99227375,"about_ca_system_score_codex":0.00007940542,"about_ca_system_score_gemma":0.0011985404,"threshold_uncertainty_score":0.7062593},"labels":[],"label_agreement":null},{"id":"W2153081066","doi":"10.1172/jci60433","title":"Brown adipose tissue oxidative metabolism contributes to energy expenditure during acute cold exposure in humans","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Adipose Tissue and Metabolism","field":"Medicine","cited_by":974,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montfort Hospital; Université de Sherbrooke; Institut universitaire de cardiologie et de pneumologie de Québec","funders":"Institut universitaire de cardiologie et de pneumologie de Québec, Université Laval; Canadian Institutes of Health Research; Université Laval; Canadian Diabetes Association; GlaxoSmithKline","keywords":"Brown adipose tissue; Thermogenesis; NEFA; Endocrinology; Internal medicine; Oxidative phosphorylation; Adipose tissue; Thermogenin; Biology; Carbohydrate metabolism; Metabolism; Chemistry; Biochemistry; Medicine; Insulin","score_opus":0.048651904068649686,"score_gpt":0.3657477110956015,"score_spread":0.31709580702695184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153081066","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9873249,0.0067418786,0.0005970007,0.003387457,0.001450472,0.00026988314,0.000008376872,0.000018394952,0.00020166341],"genre_scores_gemma":[0.9883932,0.0004773539,0.0032867182,0.0031281465,0.0032573899,0.000013523075,0.0000150461965,0.000030543313,0.0013981123],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9967591,0.00034778667,0.0018348264,0.00020509155,0.00045950987,0.00039367977],"domain_scores_gemma":[0.9973756,0.00032045945,0.0008455789,0.0002514156,0.00036726583,0.0008396614],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016343817,0.00021992427,0.0010999,0.00035595303,0.00006531443,0.000026784119,0.00016801684,0.00033114207,0.000090579306],"category_scores_gemma":[0.0016357625,0.00017514359,0.00021839095,0.0003593071,0.00013254031,0.0006363485,0.000053561413,0.00070394675,0.000031050367],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019524591,0.0011769513,0.23045795,0.00008907345,0.0015509413,0.0004136574,0.004625546,0.000044518085,0.7143314,0.019940384,0.015440789,0.009976331],"study_design_scores_gemma":[0.004617476,0.0004300328,0.63177633,0.00032792668,0.000805634,0.000086823784,0.00015679821,0.0000035204116,0.24866058,0.0008886421,0.11205725,0.00018899933],"about_ca_topic_score_codex":0.000030622905,"about_ca_topic_score_gemma":0.000022412556,"teacher_disagreement_score":0.46567082,"about_ca_system_score_codex":0.00006262975,"about_ca_system_score_gemma":0.00020114881,"threshold_uncertainty_score":0.7142148},"labels":[],"label_agreement":null},{"id":"W2153102072","doi":"10.1172/jci85194","title":"The Canadian clinician-scientist training program must be reinstated","year":2015,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Health and Medical Research Impacts","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of British Columbia Hospital; International Collaboration On Repair Discoveries; University of British Columbia; BC Cancer Agency","funders":"Canadian Institutes of Health Research; Canadian Hematology Society","keywords":"Mandate; Research program; Translational research; Context (archaeology); Medical education; Program director; Odds; Medical research; Political science; Medicine; Pathology","score_opus":0.7843444281488041,"score_gpt":0.6468545012931034,"score_spread":0.13748992685570072,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153102072","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00013321207,0.96017253,0.000005668979,0.031180091,0.003306447,0.0018689474,0.00002342318,0.000027581666,0.0032821116],"genre_scores_gemma":[0.00004086525,0.9875755,0.0013884216,0.0065361876,0.0033684345,0.000023601076,0.000103804894,0.000044488963,0.00091870537],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9901752,0.0015389973,0.004866377,0.0002793854,0.0020241027,0.0011159697],"domain_scores_gemma":[0.9595965,0.0046567037,0.0037693444,0.00057286065,0.0025088526,0.028895738],"candidate_categories":["metaresearch","research_integrity"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.04158702,0.00028149318,0.0025376154,0.00039169576,0.00034661792,0.00018195539,0.00044809707,0.00089303753,0.000029558723],"category_scores_gemma":[0.30820426,0.00015026362,0.0008606201,0.0008840776,0.0012017502,0.00015754224,0.00003611994,0.004458274,0.000052420677],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036959893,0.00005206733,0.000026259528,0.0014080309,0.000115726885,0.00024244591,0.00006696871,8.333464e-8,1.5754326e-8,0.000052579777,0.116816044,0.8811828],"study_design_scores_gemma":[0.0009845967,0.001978074,0.00010759283,0.013574324,0.0006044741,0.00039157327,0.000062338964,0.00005223207,7.040247e-8,0.00026453644,0.9818584,0.00012178774],"about_ca_topic_score_codex":0.0016702311,"about_ca_topic_score_gemma":0.013629431,"teacher_disagreement_score":0.881061,"about_ca_system_score_codex":0.00085088715,"about_ca_system_score_gemma":0.18304184,"threshold_uncertainty_score":0.9978385},"labels":[],"label_agreement":null},{"id":"W2153898363","doi":"10.1172/jci43498","title":"Pain imaging in health and disease — how far have we come?","year":2010,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Pain Mechanisms and Treatments","field":"Medicine","cited_by":216,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research; Pfizer Canada; McGill University; International Association for the Study of Pain; Louise and Alan Edwards Foundation; Pfizer","keywords":"Chronic pain; Neuroscience; Neuroimaging; Medicine; Functional imaging; Disease; Placebo; Brain Structure and Function; Brain function; Psychology; Physical medicine and rehabilitation; Pathology; Alternative medicine","score_opus":0.16563776841363062,"score_gpt":0.4613808933010145,"score_spread":0.29574312488738386,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153898363","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00027390584,0.9827704,0.00032358972,0.015814273,0.00033902287,0.00045582734,0.000007202383,0.0000067088836,0.000009070067],"genre_scores_gemma":[0.0001877546,0.99225116,0.00418064,0.0026234828,0.00056797016,0.000006741841,0.000040767467,0.000028082552,0.000113422684],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99610394,0.0012607895,0.0019091634,0.00021867164,0.00032859435,0.00017881165],"domain_scores_gemma":[0.99477816,0.0011132971,0.0023412225,0.00019699763,0.00010765952,0.0014626535],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0065080877,0.00022979248,0.0019533155,0.00025258132,0.000039509967,0.000039989274,0.00008433164,0.00021442208,0.0000069855637],"category_scores_gemma":[0.008538568,0.00015466259,0.00043862694,0.00011266876,0.00013561512,0.00012268081,0.000025911826,0.0013345516,0.0000026972684],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002565009,0.00011909142,0.0213019,0.0044923583,0.000050497707,0.00020439224,0.000028126331,6.436414e-8,1.964426e-7,0.000092255475,0.00069220085,0.97299325],"study_design_scores_gemma":[0.0016543613,0.00041858185,0.0026111705,0.043173574,0.0005593594,0.00012634668,0.000033334778,0.00026639894,1.0354118e-7,0.0055403137,0.9454684,0.0001480477],"about_ca_topic_score_codex":0.0000068472586,"about_ca_topic_score_gemma":0.000006213976,"teacher_disagreement_score":0.9728452,"about_ca_system_score_codex":0.00008998053,"about_ca_system_score_gemma":0.0019149603,"threshold_uncertainty_score":0.99981296},"labels":[],"label_agreement":null},{"id":"W2154522740","doi":"10.1172/jci6539","title":"Elastase and matrix metalloproteinase inhibitors induce regression, and tenascin-C antisense prevents progression, of vascular disease","year":2000,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Protease and Inhibitor Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":300,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"Medical Research Council; Hospital for Sick Children; Medical Research Council Canada; Heart and Stroke Foundation of Canada","keywords":"Apoptosis; Matrix metalloproteinase; Tenascin C; Vascular smooth muscle; Biology; Cancer research; Cell biology; Population; Immunology; Endocrinology; Medicine; Extracellular matrix; Biochemistry","score_opus":0.02223603691105288,"score_gpt":0.33866416341706396,"score_spread":0.3164281265060111,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2154522740","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99598414,0.0032365036,0.000072752795,0.00030855025,0.00012042962,0.0002525824,0.0000102505965,0.0000033912572,0.00001142176],"genre_scores_gemma":[0.9941895,0.0016187497,0.0035223558,0.00014043062,0.00039594047,0.0000048491543,0.000017404058,0.000014694212,0.00009609363],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980063,0.00033213853,0.00099893,0.0002380723,0.00030017423,0.00012442823],"domain_scores_gemma":[0.99844056,0.000032988704,0.0006928857,0.00020444546,0.0001834377,0.0004456918],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013364672,0.00014327059,0.00032255307,0.000057109435,0.000060597813,0.000020224317,0.00008767581,0.0001793592,0.000017571767],"category_scores_gemma":[0.000978126,0.000102145124,0.00015710422,0.00008469024,0.00023330328,0.00003515418,0.000058425536,0.00020176923,9.991635e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00086019776,0.00030319166,0.016265117,0.000148139,0.00014430184,0.00005193103,0.000047060075,0.000013030782,0.9379994,0.00006378321,0.0013790911,0.04272471],"study_design_scores_gemma":[0.0027013351,0.0018229777,0.014991095,0.0009786218,0.00024040688,0.00006289458,0.000031141797,0.000113938244,0.96946365,0.004198275,0.005147458,0.00024819723],"about_ca_topic_score_codex":0.00000290946,"about_ca_topic_score_gemma":5.107603e-7,"teacher_disagreement_score":0.042476512,"about_ca_system_score_codex":0.0000040006926,"about_ca_system_score_gemma":0.00017320442,"threshold_uncertainty_score":0.41653574},"labels":[],"label_agreement":null},{"id":"W2154912131","doi":"10.1172/jci39254","title":"Genetic susceptibility to HIV-associated nephropathy","year":2009,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Renal Diseases and Glomerulopathies","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Lunenfeld-Tanenbaum Research Institute; St. Michael's Hospital; Mount Sinai Hospital","funders":"Canadian Institutes of Health Research; Kidney Foundation of Canada","keywords":"Pathogenesis; Nephropathy; Biology; Disease; Genetics; Gene; Genetic predisposition; Genetic linkage; Immunology; Medicine; Pathology; Endocrinology; Diabetes mellitus","score_opus":0.05844807734009075,"score_gpt":0.3630601500239215,"score_spread":0.3046120726838307,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2154912131","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46661943,0.00046941766,0.00008460724,0.5315181,0.0007742671,0.00031106788,0.000025408171,0.00002293197,0.00017477632],"genre_scores_gemma":[0.04701365,0.00043692617,0.003556205,0.93219763,0.015363643,0.0000033258325,0.00013619696,0.00004942298,0.0012430137],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9945775,0.0006347847,0.003025762,0.00035165198,0.0010914572,0.00031883604],"domain_scores_gemma":[0.99512124,0.00057215337,0.0020701159,0.0004151176,0.0011206379,0.00070071983],"candidate_categories":["metaresearch","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0017337366,0.0003062257,0.0014553142,0.00027001637,0.0000525624,0.000058760605,0.00021528364,0.0010208479,0.00011553578],"category_scores_gemma":[0.00881373,0.00023331432,0.0010349097,0.00034197545,0.00021268017,0.00011187586,0.000034845216,0.0028754016,0.00012112579],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022341206,0.00015954973,0.05711648,0.00015692624,0.00015116337,0.0009968663,0.00004574958,0.00001800632,0.00011036193,0.0000017141107,0.9343207,0.0066991034],"study_design_scores_gemma":[0.0013642039,0.0029023779,0.7739681,0.0014642632,0.0009128182,0.00011387104,0.0000114009545,0.000059648857,0.00003139024,0.0029293438,0.2159967,0.00024589765],"about_ca_topic_score_codex":0.000010727435,"about_ca_topic_score_gemma":0.0000043198297,"teacher_disagreement_score":0.71832395,"about_ca_system_score_codex":0.00015177201,"about_ca_system_score_gemma":0.00093496067,"threshold_uncertainty_score":0.99953544},"labels":[],"label_agreement":null},{"id":"W2155382351","doi":"10.1172/jci64201","title":"Endothelial SRF/MRTF ablation causes vascular disease phenotypes in murine retinae","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Retinal Development and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":71,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pyrogenesis (Canada)","funders":"Bundesministerium für Bildung und Forschung; Deutsche Forschungsgemeinschaft","keywords":"Retinal; Biology; Angiogenesis; Neovascularization; PEDF; Retina; Serum response factor; Vascular endothelial growth factor A; Pathology; Cell biology; Vascular endothelial growth factor; Cancer research; Transcription factor; Medicine; Neuroscience; Genetics; Gene","score_opus":0.02853728438631794,"score_gpt":0.31298348669439163,"score_spread":0.2844462023080737,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2155382351","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99742275,0.0003250116,0.00035426236,0.0011559394,0.00026728422,0.00013436053,0.0000012114813,0.0000034087282,0.00033575186],"genre_scores_gemma":[0.99633557,0.0005900173,0.0017910597,0.0005588841,0.000511047,0.0000055825694,0.00003098572,0.000010906074,0.00016597984],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99848586,0.00017389384,0.00085423054,0.00014871056,0.00021619005,0.00012108494],"domain_scores_gemma":[0.9989866,0.00006083389,0.00042743416,0.00012161876,0.00021617346,0.00018735923],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000771535,0.00009773968,0.00019164736,0.0000629379,0.000027515234,0.000028813762,0.00011647979,0.00010762081,0.000059597292],"category_scores_gemma":[0.0020021934,0.000081230915,0.00014237051,0.000085043954,0.00010390053,0.000027234628,0.00002422796,0.0001539966,0.000021975939],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002941953,0.00014538647,0.9384392,0.000035559922,0.000064356136,0.000006871069,0.00006713338,0.00031487027,0.05132942,0.0001824392,0.003703692,0.005416862],"study_design_scores_gemma":[0.0011930874,0.00024784158,0.9771942,0.000066027496,0.000029184277,0.000002492869,0.0000348742,0.00014405602,0.00812708,0.0059799175,0.0068448046,0.00013641384],"about_ca_topic_score_codex":0.000023945802,"about_ca_topic_score_gemma":0.000017070748,"teacher_disagreement_score":0.04320234,"about_ca_system_score_codex":0.000009889349,"about_ca_system_score_gemma":0.00019691492,"threshold_uncertainty_score":0.33125004},"labels":[],"label_agreement":null},{"id":"W2155848079","doi":"10.1172/jci25463","title":"Control of homeostatic proliferation by regulatory T cells","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":90,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; School of Medicine, Vanderbilt University; School of Medicine, New York University; National Institutes of Health; National Multiple Sclerosis Society; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Multiple Sclerosis Society; York University; Vanderbilt University","keywords":"Homeostasis; Cell biology; Effector; Cell growth; Biology; T cell; Immunology; Immune system; Genetics","score_opus":0.026852671356631292,"score_gpt":0.30505264304663054,"score_spread":0.27819997168999927,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2155848079","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99028134,0.0007780361,0.003773976,0.0016858659,0.0031785695,0.000121071345,0.0000027354906,0.000009893368,0.00016852132],"genre_scores_gemma":[0.9967999,0.00007951283,0.00032063687,0.001131993,0.00019355142,0.0000014123367,0.000019213565,0.000006123134,0.0014476985],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977015,0.00044586303,0.0015983195,0.00008857486,0.00007176381,0.00009392357],"domain_scores_gemma":[0.99758136,0.00038515386,0.0015194903,0.00010771529,0.00037098388,0.00003531073],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013662721,0.00008195672,0.0003479654,0.00008862963,0.00004334913,0.000008797052,0.000086321015,0.0002029391,0.00034383067],"category_scores_gemma":[0.00063004013,0.00006685103,0.00016971007,0.0000667682,0.00018198538,0.00034778976,0.000006402511,0.0003962398,0.00011097498],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00050097087,0.00020423938,0.004542537,0.0000144712085,0.00014332496,3.0229032e-7,0.00012755471,0.00016792482,0.8803806,0.00028236082,0.10249329,0.011142481],"study_design_scores_gemma":[0.004139121,0.0011093705,0.0114389025,0.00009060247,0.00012763025,0.00003680159,0.00007971053,0.00041863308,0.84374046,0.00026468773,0.13844234,0.00011175086],"about_ca_topic_score_codex":0.0000033368228,"about_ca_topic_score_gemma":0.0000010425421,"teacher_disagreement_score":0.036640093,"about_ca_system_score_codex":0.000028541815,"about_ca_system_score_gemma":0.000119805554,"threshold_uncertainty_score":0.37647048},"labels":[],"label_agreement":null},{"id":"W2155852459","doi":"10.1172/jci33754","title":"Complex two-gene modulation of lung disease severity in children with cystic fibrosis","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cystic Fibrosis Research Advances","field":"Medicine","cited_by":141,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"SickKids Foundation; University of Toronto; Centre Hospitalier de l’Université de Montréal; Institute for Clinical Evaluative Sciences; University of British Columbia; Hospital for Sick Children","funders":"Ontario Genomics; Ontario Genomics Institute; Genome Canada","keywords":"Cystic fibrosis; Mannan-binding lectin; Immunology; Lung; Pathogenesis; Disease; Genotype; Medicine; Respiratory disease; Pulmonary fibrosis; Gene; Biology; Pathology; Internal medicine; Genetics; Lectin","score_opus":0.07423618957161052,"score_gpt":0.39150269244761665,"score_spread":0.3172665028760061,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2155852459","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99678934,0.00014547099,0.0019773259,0.0007044029,0.0000483757,0.0002945343,0.0000135762075,0.0000075842445,0.000019423473],"genre_scores_gemma":[0.97025996,0.00008077013,0.029206628,0.00012381107,0.00025207145,0.000002610051,0.00004542653,0.000012523642,0.000016214428],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99733686,0.0002504279,0.0013486944,0.0001587356,0.00075081404,0.00015444616],"domain_scores_gemma":[0.9976355,0.00047660802,0.00079510146,0.00018975789,0.00045180044,0.0004512615],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009537669,0.000108467466,0.0005440327,0.00018631625,0.000039871156,0.0000073785404,0.00009850358,0.000056330326,0.000031356827],"category_scores_gemma":[0.0036337047,0.0000813965,0.00013735739,0.0003559292,0.00045628168,0.00030218335,0.00002453614,0.00037810585,0.0000021879675],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017688577,0.00022096268,0.9842616,0.00006185232,0.00006603422,0.000028279757,0.000047479298,0.0030280813,0.009104568,0.000018936385,0.00019625512,0.001197129],"study_design_scores_gemma":[0.0035016045,0.0005830316,0.9672663,0.00036067623,0.000088301684,0.00015297825,0.0000057538878,0.026330251,0.0008689585,0.00075414503,0.000014449472,0.00007350554],"about_ca_topic_score_codex":0.00004108874,"about_ca_topic_score_gemma":0.0000082179195,"teacher_disagreement_score":0.027229302,"about_ca_system_score_codex":0.000074107316,"about_ca_system_score_gemma":0.0005412812,"threshold_uncertainty_score":0.43501464},"labels":[],"label_agreement":null},{"id":"W2156451662","doi":"10.1172/jci10167","title":"Treatment of murine lupus with cDNA encoding IFN-γR/Fc","year":2000,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":158,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute on Aging; National Institutes of Health","keywords":"Systemic lupus erythematosus; Immunology; Medicine; Autoimmune disease; Autoantibody; Pathogenesis; Genetic enhancement; Lupus erythematosus; Disease; Biology; Antibody; Pathology; Gene","score_opus":0.12716137955816825,"score_gpt":0.42572932777046774,"score_spread":0.2985679482122995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2156451662","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98821884,0.00034192973,0.000013709045,0.007108052,0.00015840605,0.0001325253,0.000004226006,0.000005931119,0.0040163966],"genre_scores_gemma":[0.9845379,0.0020072924,0.004139013,0.00031114634,0.0010787521,0.0000018182801,0.000010198712,0.000011984814,0.007901916],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978668,0.00012912629,0.0011728503,0.00012494445,0.0005489484,0.00015729388],"domain_scores_gemma":[0.99830025,0.00044011069,0.00046419541,0.00013693298,0.0002883214,0.00037021242],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00056931993,0.00011595203,0.0005917807,0.00009554275,0.000040725365,0.000010338458,0.00007562584,0.00009000606,0.00060043234],"category_scores_gemma":[0.00025416663,0.00006625786,0.00024821865,0.00016601275,0.00028656572,0.000118029,0.000007682248,0.00025413928,0.000031491396],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007470058,0.0010394242,0.8115461,0.00013287956,0.00049492164,0.0004302566,0.000459989,0.0001322592,0.003807649,0.0002419469,0.002631144,0.17161341],"study_design_scores_gemma":[0.011060467,0.03418842,0.8220809,0.00097376184,0.0005157115,0.0024796063,0.00010988585,0.0016242274,0.018235212,0.0014037183,0.10708458,0.00024348135],"about_ca_topic_score_codex":0.00005327636,"about_ca_topic_score_gemma":0.0000115688235,"teacher_disagreement_score":0.17136993,"about_ca_system_score_codex":0.000041805633,"about_ca_system_score_gemma":0.00031230005,"threshold_uncertainty_score":0.6574313},"labels":[],"label_agreement":null},{"id":"W2156483545","doi":"10.1172/jci80102","title":"RAP1-mediated MEK/ERK pathway defects in Kabuki syndrome","year":2015,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Genomics and Rare Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":86,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre","funders":"National Institutes of Health; Türkiye Bilimsel ve Teknolojik Araştırma Kurumu; National Institute of Diabetes and Digestive and Kidney Diseases; Bundesministerium für Bildung und Forschung; E-Rare","keywords":"Kabuki syndrome; Zebrafish; Biology; MAPK/ERK pathway; Phenotype; Genetics; Mutation; Costello syndrome; Chromatin; Epigenetics; Cancer research; Cell biology; Signal transduction; Gene; KRAS","score_opus":0.06393858764674232,"score_gpt":0.3352240235914784,"score_spread":0.2712854359447361,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2156483545","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979247,0.00093293417,0.0000631767,0.00033650463,0.0005114005,0.00007133917,0.0000063242983,0.0000027922265,0.00015086289],"genre_scores_gemma":[0.9980424,0.00019790397,0.0005989142,0.0007096557,0.0003461147,0.0000017064959,0.000047488364,0.00001154122,0.000044280885],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99848694,0.00020474044,0.00085426104,0.00014243725,0.00018395309,0.00012766749],"domain_scores_gemma":[0.99870497,0.00007563212,0.00048632608,0.00013894662,0.00022207602,0.00037203595],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013752354,0.0000925183,0.0002521091,0.000068249225,0.000015964593,0.00001857444,0.00014806894,0.00018839653,0.000005548365],"category_scores_gemma":[0.002863288,0.00007607568,0.00015912877,0.000104296014,0.000094418036,0.000009643408,0.000039306375,0.0001894724,0.000013773212],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010248772,0.0008196269,0.82398593,0.000062838655,0.00025851524,0.0008438964,0.0003154801,0.0017118966,0.1483232,0.0002465326,0.017612891,0.0047943145],"study_design_scores_gemma":[0.012611358,0.0066124997,0.8771927,0.00048401882,0.00016308906,0.0009456583,0.00049803074,0.0007384068,0.03784606,0.01714015,0.04489851,0.0008695648],"about_ca_topic_score_codex":0.000005241085,"about_ca_topic_score_gemma":0.000016457376,"teacher_disagreement_score":0.110477135,"about_ca_system_score_codex":0.000015062313,"about_ca_system_score_gemma":0.0005722736,"threshold_uncertainty_score":0.342783},"labels":[],"label_agreement":null},{"id":"W2156796753","doi":"10.1172/jci43134","title":"Remodeling of the arcuate nucleus energy-balance circuit is inhibited in obese mice","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Regulation of Appetite and Obesity","field":"Neuroscience","cited_by":313,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institutes of Health; University of Aberdeen; McGill University","keywords":"Arcuate nucleus; Leptin; Neurogenesis; Hypothalamus; Endocrinology; Biology; Internal medicine; Nucleus; Protein turnover; Neuroscience; Medicine; Obesity; Protein biosynthesis","score_opus":0.18389160835167473,"score_gpt":0.33587930783966324,"score_spread":0.15198769948798851,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2156796753","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971991,0.000025225932,0.00036973794,0.0008705071,0.0003383589,0.00005329381,0.0000018818839,0.000005836216,0.001136022],"genre_scores_gemma":[0.9962705,0.00013428487,0.00083164807,0.0025252718,0.00013188586,3.9712333e-7,2.050039e-7,0.0000081767175,0.000097658674],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99746376,0.00038215664,0.0014576119,0.00016497796,0.00041016302,0.0001213309],"domain_scores_gemma":[0.9977238,0.0003670664,0.0014079821,0.00020751331,0.0001857966,0.00010783235],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013164192,0.00008517012,0.00027893513,0.00009882771,0.00004655345,0.000014649435,0.0003426342,0.00011683829,0.00002767537],"category_scores_gemma":[0.0024885596,0.000060479644,0.00018322608,0.00040786032,0.00027476245,0.0003405402,0.00004781778,0.00034969614,0.000005391912],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002732116,0.0004143454,0.37791312,0.000048928774,0.000014411091,0.000018643628,0.0024486792,0.0008362499,0.59768105,0.012322908,0.00065669016,0.0073717902],"study_design_scores_gemma":[0.00077759335,0.00012233408,0.27558163,0.0003462752,0.00001576361,0.000018246334,0.000027582531,0.009360842,0.64594525,0.06728811,0.00042590773,0.00009050455],"about_ca_topic_score_codex":0.00003674853,"about_ca_topic_score_gemma":0.000011338782,"teacher_disagreement_score":0.102331504,"about_ca_system_score_codex":0.000020858137,"about_ca_system_score_gemma":0.00014317388,"threshold_uncertainty_score":0.2979218},"labels":[],"label_agreement":null},{"id":"W2157430783","doi":"10.1172/jci18991","title":"TNF-α is a critical negative regulator of type 1 immune activation during intracellular bacterial infection","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":200,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University Medical Centre","funders":"Canadian Institutes of Health Research","keywords":"Tumor necrosis factor alpha; Immune system; Immunology; Cytokine; Biology; CD8; Cytotoxic T cell; Immunity; Antigen; T cell; Necrosis; Microbiology","score_opus":0.0737972340683897,"score_gpt":0.3989588763116381,"score_spread":0.3251616422432484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2157430783","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99373424,0.000036029294,0.00025716543,0.0052090744,0.00051064993,0.00017086661,0.0000027120511,0.000010633954,0.00006864097],"genre_scores_gemma":[0.99522185,0.00017305526,0.0031006462,0.00019842634,0.001257642,0.000002265747,0.00001063043,0.000013851927,0.000021613876],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99753153,0.00019249886,0.0014694346,0.0001412394,0.0005044856,0.00016078979],"domain_scores_gemma":[0.99695045,0.0006164808,0.0007446422,0.00016533812,0.0011709322,0.0003521412],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0011691785,0.000108160115,0.0005091427,0.00018016691,0.000051665316,0.000026201355,0.00006163335,0.00021527667,0.00024680386],"category_scores_gemma":[0.018058162,0.000089521185,0.0002350923,0.00030943457,0.00027764973,0.00049414794,0.000026664937,0.0005337687,0.00001408694],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0038809597,0.0006005865,0.09324225,0.00032175175,0.00019668629,0.000030812727,0.0003624715,0.000038851762,0.89822316,0.00075138867,0.00037289207,0.0019781648],"study_design_scores_gemma":[0.0023652303,0.0014196875,0.5165797,0.0005802846,0.00008271189,0.00003905339,0.00002306039,0.000030782703,0.475544,0.003183377,0.00009723228,0.00005489792],"about_ca_topic_score_codex":0.00007498473,"about_ca_topic_score_gemma":0.0000018289647,"teacher_disagreement_score":0.42333743,"about_ca_system_score_codex":0.00011063552,"about_ca_system_score_gemma":0.0006099229,"threshold_uncertainty_score":0.99021316},"labels":[],"label_agreement":null},{"id":"W2157907012","doi":"10.1172/jci8688","title":"Pharmacological chaperones rescue cell-surface expression and function of misfolded V2 vasopressin receptor mutants","year":2000,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Ion Transport and Channel Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":562,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital du Sacré-Cœur de Montréal","funders":"Medical Research Council; Kidney Foundation of Canada; Medical Research Council Canada; Heart and Stroke Foundation of Canada","keywords":"Mutant; Receptor; Arginine vasopressin receptor 2; Cell biology; Cell; Chemical chaperone; Chemistry; Vasopressin receptor; HEK 293 cells; Biology; Biochemistry; Antagonist; Gene","score_opus":0.041214331622907815,"score_gpt":0.32095884426455484,"score_spread":0.279744512641647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2157907012","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99825144,0.0005999834,0.00038941938,0.00024300665,0.00033028668,0.00008532612,0.0000039792185,0.000004094712,0.00009248401],"genre_scores_gemma":[0.9958934,0.0012972023,0.0017709832,0.00014607103,0.00052269356,9.399192e-7,0.000030270785,0.000009163239,0.00032923958],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985138,0.00017723041,0.0008465142,0.00016318707,0.00020311568,0.00009616389],"domain_scores_gemma":[0.9991384,0.000042122818,0.00043107726,0.00008346591,0.0001654601,0.00013945],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006957453,0.00009913317,0.00023478908,0.000023794062,0.000046402314,0.000009501963,0.00007999214,0.00025211778,0.00018694815],"category_scores_gemma":[0.00008205984,0.00007692705,0.00011658346,0.000060836228,0.00015500258,0.000022761671,0.000010788793,0.00015903068,0.0000025449942],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008926748,0.00009951926,0.0076116864,0.000019769335,0.000026330727,0.0000011041973,0.00004377416,0.00061153015,0.9815904,0.0000037663367,0.0010039655,0.008095481],"study_design_scores_gemma":[0.0017463253,0.0009983485,0.06380158,0.000084729225,0.00008315373,0.0000064404603,0.000040737476,0.0003566589,0.9285168,0.00025481635,0.0040030973,0.000107331005],"about_ca_topic_score_codex":0.0000015953273,"about_ca_topic_score_gemma":7.3031407e-7,"teacher_disagreement_score":0.05618989,"about_ca_system_score_codex":0.0000042092975,"about_ca_system_score_gemma":0.000060047947,"threshold_uncertainty_score":0.3136994},"labels":[],"label_agreement":null},{"id":"W2157910644","doi":"10.1172/jci24340","title":"Carcinoembryonic antigen-related cell adhesion molecule 1 modulates vascular remodeling in vitro and in vivo","year":2006,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Angiogenesis and VEGF in Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":93,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Deutsche Krebshilfe; Deutsche Forschungsgemeinschaft; Cancer Research Society","keywords":"Angiogenesis; Cell adhesion molecule; Arteriogenesis; Matrigel; Biology; Cell biology; Cancer research; In vivo; Selectin; Pathology; Medicine","score_opus":0.025055578190056115,"score_gpt":0.29862603639582014,"score_spread":0.27357045820576403,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2157910644","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943952,0.0049439864,0.00023958889,0.00013294966,0.00012391966,0.00007302143,0.0000014367045,0.0000019710694,0.00008792201],"genre_scores_gemma":[0.99637717,0.0015794992,0.0016135961,0.00015114633,0.000208583,0.0000012298779,0.00001040281,0.000013690248,0.000044690067],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99830604,0.0001705115,0.0010385815,0.00019866158,0.0001456363,0.00014056357],"domain_scores_gemma":[0.99927557,0.000038228198,0.0003887757,0.0001189208,0.000102665486,0.00007582846],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001009351,0.00010411667,0.00026924143,0.000093884664,0.000023268964,0.000014594458,0.000087041575,0.00024296682,0.000004242534],"category_scores_gemma":[0.00013959376,0.000093054885,0.00015489424,0.00012446064,0.00007490778,0.0000137758425,0.00003276451,0.00018540237,6.751685e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009188073,0.00005422457,0.124573186,0.00001172669,0.000009164682,0.0000065252284,0.000012525452,0.0053925575,0.86930156,0.0000070775823,0.00013614712,0.0004034083],"study_design_scores_gemma":[0.0016103613,0.00017464484,0.21117812,0.000084293126,0.000021352967,0.00001014049,0.000024357652,0.011876556,0.7733585,0.0010561912,0.00045584055,0.00014960617],"about_ca_topic_score_codex":0.00007644679,"about_ca_topic_score_gemma":0.000030452562,"teacher_disagreement_score":0.09594303,"about_ca_system_score_codex":0.000017990611,"about_ca_system_score_gemma":0.00010157977,"threshold_uncertainty_score":0.3794668},"labels":[],"label_agreement":null},{"id":"W2158007655","doi":"10.1172/jci37176","title":"Loss-of-function variants in endothelial lipase are a cause of elevated HDL cholesterol in humans","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Diabetes, Cardiovascular Risks, and Lipoproteins","field":"Medicine","cited_by":193,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"National Heart, Lung, and Blood Institute; National Center for Research Resources; Broad Institute","keywords":"Lipase; Nonsynonymous substitution; Biology; Cholesterol; Mutation; Internal medicine; Endocrinology; Genetics; Enzyme; Biochemistry; Medicine; Gene; Genome","score_opus":0.07333857289274275,"score_gpt":0.3547129321314933,"score_spread":0.28137435923875054,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158007655","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99819696,0.00018751099,0.00024165426,0.00068892847,0.0003258356,0.00027475797,0.0000053504546,0.000006535231,0.00007244256],"genre_scores_gemma":[0.99813896,0.0001786081,0.0005487263,0.000531772,0.0005538287,0.000002176552,0.0000070341466,0.000011831271,0.000027070695],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9965848,0.00037775512,0.0022023849,0.0001638153,0.0005136196,0.00015762461],"domain_scores_gemma":[0.9976986,0.00018124025,0.0013449029,0.00025309884,0.00034135132,0.00018077767],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002953147,0.00012537002,0.0009829944,0.0003642366,0.000012450734,0.000009351348,0.00009762774,0.00023183569,0.00001855199],"category_scores_gemma":[0.0031241542,0.00010624841,0.00037146782,0.00036807437,0.00014627833,0.00025187345,0.000010452229,0.00061902305,0.0000034007264],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022374508,0.0016435258,0.873878,0.00023571812,0.0003733861,0.0002573961,0.0006085547,0.0005125026,0.008433529,0.0001261794,0.00021713981,0.111476645],"study_design_scores_gemma":[0.0074917683,0.0016812468,0.98118454,0.0013871897,0.00023407982,0.00002334619,0.000057033492,0.0001916239,0.0052155117,0.002259671,0.00019290183,0.00008108821],"about_ca_topic_score_codex":0.0003463061,"about_ca_topic_score_gemma":0.00031297127,"teacher_disagreement_score":0.11139555,"about_ca_system_score_codex":0.000048193633,"about_ca_system_score_gemma":0.0002479086,"threshold_uncertainty_score":0.43326843},"labels":[],"label_agreement":null},{"id":"W2158092720","doi":"10.1172/jci28941","title":"Human CD4+ CD25hi Foxp3+ regulatory T cells are derived by rapid turnover of memory populations in vivo","year":2006,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":487,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Medical Research Council; Directorate for Biological Sciences; Henry Smith Charity","keywords":"FOXP3; Biology; IL-2 receptor; Population; Telomere; Cell biology; Immunology; T cell; Genetics; Immune system; Medicine; Gene","score_opus":0.05413647620024828,"score_gpt":0.31294381926563836,"score_spread":0.2588073430653901,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158092720","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955816,0.0018289236,0.00003954992,0.00057123246,0.0013829398,0.00013181307,0.00001690954,0.000014335641,0.00043268848],"genre_scores_gemma":[0.9974253,0.00004347322,0.0002661528,0.00025790534,0.00017110413,0.0000021953313,0.00003716242,0.00001673444,0.0017799269],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99635917,0.00072316645,0.0023794621,0.00020885892,0.00009211956,0.00023723846],"domain_scores_gemma":[0.9969301,0.0003138097,0.002231078,0.00024679964,0.00023309849,0.00004506345],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012294326,0.00017496866,0.00071534707,0.00021469314,0.00009602844,0.000009583047,0.00025698156,0.00059091166,0.00042311073],"category_scores_gemma":[0.00026513208,0.0001529369,0.0002843043,0.00017845654,0.000714621,0.00020962859,0.00004651541,0.000764863,0.000028542025],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000087423876,0.00035271895,0.037089758,0.00001618816,0.000064618216,0.000005731083,0.000061805775,0.00011709026,0.92407614,0.0003258837,0.037501026,0.00030160527],"study_design_scores_gemma":[0.003288802,0.00042244562,0.17113812,0.00013882734,0.00008778401,0.000030875242,0.000118380245,0.000008635104,0.8158783,0.004265485,0.004444614,0.00017773158],"about_ca_topic_score_codex":0.00016032229,"about_ca_topic_score_gemma":0.00015303292,"teacher_disagreement_score":0.13404837,"about_ca_system_score_codex":0.000044785706,"about_ca_system_score_gemma":0.0001223219,"threshold_uncertainty_score":0.6236586},"labels":[],"label_agreement":null},{"id":"W2159267239","doi":"10.1172/jci66603","title":"Hedgehog signaling regulates FOXA2 in esophageal embryogenesis and Barrett’s metaplasia","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Hedgehog Signaling Pathway Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":94,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Cancer Institute; RIKEN; National Institute of Child Health and Human Development; American Cancer Society; U.S. Department of Veterans Affairs; Ministry of Education, Culture, Sports, Science and Technology; Victorian Cancer Agency","keywords":"FOXA2; Metaplasia; Barrett's esophagus; Esophagus; Cancer research; Biology; Mucin 2; Intestinal metaplasia; Epithelium; Sonic hedgehog; Pathology; Dysplasia; Adenocarcinoma; Signal transduction; Transcription factor; Medicine; Cell biology; Gene expression; Anatomy; Cancer","score_opus":0.045093113120697935,"score_gpt":0.3292479470615772,"score_spread":0.28415483394087926,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2159267239","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99643844,0.001633168,0.0009430448,0.00053848774,0.00031328868,0.00006818481,0.0000012832556,0.0000045438624,0.000059537],"genre_scores_gemma":[0.9939647,0.00017319605,0.004436485,0.00052381394,0.0007819513,0.0000021070393,0.000005730119,0.000016699163,0.000095334355],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977894,0.00045068012,0.0011730386,0.00023022993,0.00019387985,0.00016279095],"domain_scores_gemma":[0.9985982,0.00029635432,0.00057125883,0.00014935725,0.00020301975,0.000181792],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0031248664,0.00014063937,0.00042907652,0.000093513816,0.000054302993,0.000028039773,0.00013841999,0.00021010094,0.0000044472126],"category_scores_gemma":[0.0036405665,0.00012027763,0.00015284507,0.00010950254,0.00022380057,0.000013969034,0.000059532485,0.00022133891,0.0000022475401],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021211154,0.00008733699,0.41748938,0.00007095454,0.00022111894,0.000018064959,0.00020910767,0.0012245952,0.5660224,0.00029731743,0.0009860746,0.0131615605],"study_design_scores_gemma":[0.002560594,0.0013969198,0.44058773,0.00023277292,0.0001546619,0.00007076465,0.00014190804,0.0016159426,0.5462448,0.0041891974,0.002471124,0.0003335685],"about_ca_topic_score_codex":0.000004447095,"about_ca_topic_score_gemma":0.0000124345,"teacher_disagreement_score":0.023098346,"about_ca_system_score_codex":0.000009060517,"about_ca_system_score_gemma":0.00010176007,"threshold_uncertainty_score":0.49047795},"labels":[],"label_agreement":null},{"id":"W2159289955","doi":"10.1172/jci9110","title":"Supramaximal cholecystokinin displaces Munc18c from the pancreatic acinar basal surface, redirecting apical exocytosis to the basal membrane","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":101,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"Medical Research Council; Deutsche Forschungsgemeinschaft","keywords":"Exocytosis; Internal medicine; Endocrinology; Secretion; Stimulation; Basal (medicine); Cholecystokinin; Acinar cell; Protein kinase C; Cell biology; Acinus; Chemistry; Biology; Pancreas; Signal transduction; Receptor; Medicine","score_opus":0.046079047990095844,"score_gpt":0.3160476485824605,"score_spread":0.26996860059236466,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2159289955","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98407584,0.00037553083,0.004605422,0.009966523,0.00067174516,0.00017610916,0.000011094765,0.000007136823,0.000110566434],"genre_scores_gemma":[0.9931343,0.00044010291,0.00145865,0.002215334,0.0023757094,0.0000035631467,0.00021144902,0.000021075495,0.0001398195],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9974582,0.000546264,0.0011041829,0.00025968105,0.00041737032,0.0002142575],"domain_scores_gemma":[0.9982068,0.0005249041,0.000518158,0.00031955694,0.0002045104,0.00022608227],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002693214,0.00017014456,0.00033939598,0.000023113715,0.00020035882,0.00007323883,0.00038179255,0.00024361245,0.000052145086],"category_scores_gemma":[0.0017871375,0.000100219186,0.0002981885,0.0001896027,0.00019505626,0.000022010103,0.00004969974,0.0005146887,0.000013469325],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001813754,0.00013604217,0.42025754,0.000011463614,0.00025906978,0.000031744858,0.000589693,0.0014386419,0.56927925,0.000032963115,0.0035850678,0.0025647434],"study_design_scores_gemma":[0.003256171,0.0017466426,0.76770496,0.00027612946,0.000528376,0.0000869285,0.00080021087,0.0025514814,0.13299698,0.00082900526,0.088738166,0.00048493023],"about_ca_topic_score_codex":0.00009225258,"about_ca_topic_score_gemma":0.00020335402,"teacher_disagreement_score":0.43628228,"about_ca_system_score_codex":0.00001727678,"about_ca_system_score_gemma":0.00016691025,"threshold_uncertainty_score":0.408682},"labels":[],"label_agreement":null},{"id":"W2159329774","doi":"10.1172/jci12412","title":"Complete heart block and sudden death in mice overexpressing calreticulin","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Endoplasmic Reticulum Stress and Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":138,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of Calgary; University of Alberta; Canadian Institutes of Health Research","funders":"Canadian Institutes of Health Research; Fondation pour la Recherche Médicale; AstraZeneca","keywords":"Calreticulin; Embryonic heart; Endoplasmic reticulum; Internal medicine; Heart block; Sudden death; Sinus bradycardia; Bradycardia; Downregulation and upregulation; Sinoatrial node; Biology; Heart development; Sudden cardiac death; Heart failure; Endocrinology; Cell biology; Medicine; Heart rate; Embryonic stem cell; Electrocardiography; Gene; Genetics; Blood pressure","score_opus":0.056989475814005916,"score_gpt":0.35513869903345996,"score_spread":0.29814922321945403,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2159329774","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980793,0.00059160654,0.00007999808,0.0008515311,0.00011766446,0.000053196287,0.0000037666425,0.0000018067005,0.00022112805],"genre_scores_gemma":[0.99640936,0.00045530355,0.0019285314,0.0007753282,0.00037287016,9.480123e-7,0.000008205699,0.000007358584,0.00004208664],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987209,0.00016719854,0.00071098184,0.00014635327,0.0001378294,0.000116732015],"domain_scores_gemma":[0.9991908,0.000098655975,0.00030476015,0.000091570786,0.00009789468,0.0002163132],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005454572,0.00008345433,0.00022226859,0.000037696896,0.000029549983,0.000028378918,0.0000742574,0.00011663761,0.000006378014],"category_scores_gemma":[0.0009432332,0.00007036101,0.00009462608,0.000050082792,0.00012357053,0.0000111376185,0.000037168025,0.00017528962,0.0000015509222],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027102465,0.00009759659,0.87751496,0.000020641159,0.000026989514,0.000052614076,0.000035274697,0.00040515527,0.119081914,0.000087353095,0.0017549148,0.0006515784],"study_design_scores_gemma":[0.0043931035,0.0008701816,0.94905114,0.00040677722,0.00008596155,0.0005290887,0.00011574359,0.0026667265,0.019710029,0.0024420754,0.019399093,0.00033008793],"about_ca_topic_score_codex":0.000020271957,"about_ca_topic_score_gemma":0.0000132023815,"teacher_disagreement_score":0.09937189,"about_ca_system_score_codex":0.000005957759,"about_ca_system_score_gemma":0.000096182855,"threshold_uncertainty_score":0.2869239},"labels":[],"label_agreement":null},{"id":"W2159346623","doi":"10.1172/jci31021","title":"Obesity-associated improvements in metabolic profile through expansion of adipose tissue","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Adipokines, Inflammation, and Metabolic Diseases","field":"Medicine","cited_by":1299,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier de l'Université Laval","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institutes of Health; National Cancer Institute; American Diabetes Association; American Heart Association; Albert Einstein College of Medicine, Yeshiva University","keywords":"Adipose tissue; Internal medicine; Endocrinology; Insulin resistance; Adiponectin; Leptin; Metabolic syndrome; FGF21; Triglyceride; Insulin; Adipose tissue macrophages; Inflammation; White adipose tissue; Obesity; Biology; Medicine; Cholesterol","score_opus":0.05580841231074944,"score_gpt":0.38042664156410866,"score_spread":0.3246182292533592,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2159346623","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967756,0.00086585234,0.00057142525,0.00031375798,0.0005424158,0.0003449692,0.000005399701,0.000012243537,0.0005683038],"genre_scores_gemma":[0.99247515,0.0003935008,0.005560135,0.0006134623,0.0006425017,0.000002529149,0.0000317312,0.000015492673,0.00026548223],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9963069,0.0001876564,0.0025805247,0.00014503837,0.00058417855,0.00019570887],"domain_scores_gemma":[0.99665946,0.0003388671,0.0018343711,0.00017306094,0.0007175453,0.0002766921],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0034973419,0.00013055214,0.0007818994,0.00020482417,0.000029511975,0.000007910756,0.00010428765,0.00019471087,0.000069830145],"category_scores_gemma":[0.0053856354,0.0001035604,0.00020196909,0.00041878875,0.0001567954,0.00042181957,0.000020647263,0.00033883477,0.000008156158],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010801931,0.001675278,0.8554233,0.00022015245,0.00036218,0.00008442023,0.001350593,0.0000375906,0.06566757,0.0016183808,0.0013336401,0.0711467],"study_design_scores_gemma":[0.003925608,0.00055161753,0.9114514,0.000400566,0.00038217212,0.000010678061,0.000120782424,0.0000890172,0.077398986,0.0027202407,0.002858241,0.00009066292],"about_ca_topic_score_codex":0.00007558173,"about_ca_topic_score_gemma":0.000032267766,"teacher_disagreement_score":0.07105604,"about_ca_system_score_codex":0.000036812617,"about_ca_system_score_gemma":0.00050767866,"threshold_uncertainty_score":0.64474976},"labels":[],"label_agreement":null},{"id":"W2160878167","doi":"10.1172/jci27238","title":"Neutrophils and their Fc  receptors are essential in a mouse model of transfusion-related acute lung injury","year":2006,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Blood transfusion and management","field":"Medicine","cited_by":302,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Heart, Lung, and Blood Institute; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; GlaxoSmithKline","keywords":"Transfusion-related acute lung injury; Receptor; Medicine; Lung; Immunology; Internal medicine; Pulmonary edema","score_opus":0.03054032103551589,"score_gpt":0.3222820283976401,"score_spread":0.2917417073621242,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2160878167","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99175346,0.00010781947,0.00086984737,0.0066297464,0.00023722315,0.0002622941,0.000008059987,0.000010858553,0.00012068986],"genre_scores_gemma":[0.9961898,0.001346917,0.0016084667,0.00048878335,0.00013303396,0.0000020008824,0.000007739299,0.000014111007,0.00020917805],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9977056,0.00013197343,0.0016534209,0.00014744341,0.0002488869,0.000112686364],"domain_scores_gemma":[0.9987935,0.000101053105,0.00062941643,0.00014909108,0.00016722134,0.00015973968],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009636889,0.00011875699,0.00057100574,0.00022281597,0.00002538298,0.000009559922,0.00008498664,0.00018338175,0.000022787915],"category_scores_gemma":[0.00015060473,0.00008667493,0.00020151265,0.00019669413,0.00017367414,0.00015850588,0.00002083485,0.00048623307,7.5886504e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0070523988,0.0036274563,0.2558236,0.00073132466,0.0011691543,0.00009765566,0.0023861509,0.007149707,0.68812793,0.0036168331,0.011683257,0.018534519],"study_design_scores_gemma":[0.05004016,0.0060700173,0.4406046,0.004062311,0.0031882906,0.00014639259,0.0010981102,0.1895185,0.25389645,0.04945381,0.0009326564,0.0009886947],"about_ca_topic_score_codex":0.000034252538,"about_ca_topic_score_gemma":0.000033912886,"teacher_disagreement_score":0.43423146,"about_ca_system_score_codex":0.000018694203,"about_ca_system_score_gemma":0.00011045449,"threshold_uncertainty_score":0.35345012},"labels":[],"label_agreement":null},{"id":"W2160976069","doi":"10.1172/jci22753","title":"Can antibodies with specificity for soluble antigens mimic the therapeutic effects of intravenous IgG in the treatment of autoimmune disease?","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Platelet Disorders and Treatments","field":"Medicine","cited_by":102,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Canadian Blood Services; St. Michael's Hospital","funders":"Canadian Institutes of Health Research; Bayer Canada; Canadian Blood Services","keywords":"Immunology; Antibody; Antigen; Thrombocytopenic purpura; Immune system; Autoimmune disease; Medicine; Autoimmunity; Immunoglobulin G","score_opus":0.05867444117651278,"score_gpt":0.35308205368475354,"score_spread":0.29440761250824077,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2160976069","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9902808,0.0016771955,0.00007519023,0.0072052106,0.000102726895,0.00062813156,0.0000050771105,0.000002448697,0.000023213355],"genre_scores_gemma":[0.9972221,0.0016785014,0.0005930559,0.00032750404,0.00012323269,0.000007656845,0.0000084744515,0.00000844944,0.000030975873],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99861276,0.00014423623,0.00079288345,0.00008873344,0.00023236127,0.00012902572],"domain_scores_gemma":[0.99804014,0.0009173694,0.0006617414,0.00017737344,0.00013288727,0.0000704963],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053115794,0.00010693391,0.00053309795,0.000046243542,0.000045623925,0.000007776492,0.00008759851,0.000049814917,0.0000025917368],"category_scores_gemma":[0.00017680832,0.000046354748,0.00020297174,0.00011039492,0.0002673075,0.000050618284,0.0000034035475,0.000117758515,3.7977725e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0051905536,0.010052709,0.87559515,0.00043325336,0.0017894073,0.00020456937,0.008383504,0.000600358,0.0058319895,0.00090154324,0.00025128314,0.09076566],"study_design_scores_gemma":[0.0056585157,0.0056996583,0.9770962,0.00032200542,0.00068549986,0.000034124594,0.00021345537,0.00060952274,0.006190021,0.0030677745,0.00036862207,0.000054587264],"about_ca_topic_score_codex":0.000043260414,"about_ca_topic_score_gemma":0.00009823333,"teacher_disagreement_score":0.10150105,"about_ca_system_score_codex":0.0000377995,"about_ca_system_score_gemma":0.00024825524,"threshold_uncertainty_score":0.18902917},"labels":[],"label_agreement":null},{"id":"W2161071827","doi":"10.1172/jci42758","title":"Molecular profiling of cytomegalovirus-induced human CD8+ T cell differentiation","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":194,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Norwegian Biodiversity Information Centre; Nierstichting","keywords":"Biology; Cytotoxic T cell; CD8; Granzyme B; Perforin; Human cytomegalovirus; Chemokine; Granzyme; Immune system; T cell; Granzyme A; Chemokine receptor; Immunology; Virology; Virus; Cell biology","score_opus":0.09101594158875564,"score_gpt":0.4107274644319161,"score_spread":0.31971152284316046,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2161071827","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972555,0.000037206664,0.0002191234,0.0006609273,0.00042964518,0.00025326997,0.0000027975218,0.000011807773,0.0011296921],"genre_scores_gemma":[0.99532497,0.000025688849,0.0036151935,0.00024336437,0.00068710593,0.0000024686522,0.0000123636755,0.000024451845,0.00006440493],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99671775,0.00018001987,0.0019389276,0.00018077256,0.00078854605,0.00019399049],"domain_scores_gemma":[0.99682224,0.00026547236,0.0013208408,0.00028551513,0.0008854788,0.00042044144],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024333545,0.0001355418,0.0006486156,0.0003008504,0.00006171237,0.000032233613,0.00017507876,0.00030357036,0.00012004564],"category_scores_gemma":[0.0016817481,0.000107967135,0.00039349246,0.00027723028,0.00019373691,0.00021771026,0.000041551713,0.001469747,0.000016538886],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018571081,0.00027346818,0.11818568,0.00009810879,0.000058446454,0.00002200719,0.00006096189,0.000005176914,0.8776858,0.00084788795,0.00010346664,0.0024733224],"study_design_scores_gemma":[0.002401575,0.0010114312,0.16044083,0.0001074899,0.00013855284,0.000024059258,0.000027952685,0.0005608211,0.8326762,0.002165842,0.0003469963,0.00009829738],"about_ca_topic_score_codex":0.0000278878,"about_ca_topic_score_gemma":0.000014267097,"teacher_disagreement_score":0.04500962,"about_ca_system_score_codex":0.000028501749,"about_ca_system_score_gemma":0.000471023,"threshold_uncertainty_score":0.63854015},"labels":[],"label_agreement":null},{"id":"W2162161302","doi":"10.1172/jci57313","title":"The CXCR4/CXCR7/SDF-1 pathway contributes to the pathogenesis of Shiga toxin–associated hemolytic uremic syndrome in humans and mice","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":95,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University Health Network; University of Toronto; Centre for Global Health Research; Toronto General Hospital; St. Michael's Hospital","funders":"National Heart, Lung, and Blood Institute; Canadian Institutes of Health Research; National Institutes of Health; University of Toronto","keywords":"Pathogenesis; Shiga toxin; Biology; Gene expression; CXCR4; Immunology; Hemolytic anemia; Chemokine; Gene; Virulence; Inflammation; Genetics","score_opus":0.042714014762867875,"score_gpt":0.3073169262770466,"score_spread":0.2646029115141787,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2162161302","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9885445,0.0038948813,0.00007177564,0.0039791963,0.0032644703,0.00017176161,0.0000036050183,0.0000059722856,0.00006381504],"genre_scores_gemma":[0.9976828,0.00031637453,0.000021391483,0.0011899862,0.00006946383,0.0000047625736,0.00001060694,0.000008116639,0.000696468],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9974162,0.0008699812,0.0013400136,0.00009642764,0.0000692992,0.00020806832],"domain_scores_gemma":[0.9967656,0.0018701158,0.0009324069,0.00014211751,0.00024324648,0.00004652522],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0042011156,0.000105115396,0.00036187985,0.000092142414,0.00015528836,0.000020456808,0.0001736843,0.00023931352,0.00003326461],"category_scores_gemma":[0.004258198,0.00006138114,0.00014136323,0.00019430071,0.00024711652,0.00019025219,0.000039931438,0.00056326773,0.00003319405],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008907789,0.00047036377,0.3368885,0.000024035267,0.0005229367,0.0000041150433,0.0014266556,0.000043306012,0.6337599,0.0017447766,0.01569612,0.008528475],"study_design_scores_gemma":[0.0015503863,0.00054131926,0.9433037,0.0002082471,0.000107414315,0.00008659851,0.0006060008,0.000020459214,0.025092864,0.00056221377,0.027817372,0.000103390936],"about_ca_topic_score_codex":0.000029735176,"about_ca_topic_score_gemma":0.000046312005,"teacher_disagreement_score":0.6086671,"about_ca_system_score_codex":0.00005077528,"about_ca_system_score_gemma":0.00008553334,"threshold_uncertainty_score":0.5097769},"labels":[],"label_agreement":null},{"id":"W2162201817","doi":"10.1172/jci21060","title":"New insights into atopic dermatitis","year":2004,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Dermatology and Skin Diseases","field":"Medicine","cited_by":1407,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Christie (Canada)","funders":"","keywords":"Atopic dermatitis; Medicine; Immunology; Asthma; Dermatology; Disease; Phenotype; Atopy; Biology; Pathology; Gene","score_opus":0.12148370579099642,"score_gpt":0.4382144312739039,"score_spread":0.3167307254829075,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2162201817","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00042692941,0.996413,0.00027741646,0.0010230175,0.001239204,0.0002455783,7.363483e-7,0.00001663658,0.00035751355],"genre_scores_gemma":[0.00032968857,0.99194103,0.004571064,0.0012545002,0.001580637,0.0000026195705,0.00003603095,0.00002455602,0.00025985134],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9958794,0.00038054294,0.0030743135,0.00017457642,0.00036553855,0.0001256221],"domain_scores_gemma":[0.9958231,0.00067563023,0.0022865883,0.00024917998,0.0002271684,0.00073837617],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041876882,0.00023886038,0.0024980444,0.00024262191,0.000045669698,0.000023488712,0.00019097993,0.00069607986,0.00010188978],"category_scores_gemma":[0.0027477175,0.00016251845,0.0011899269,0.0002360938,0.00020136488,0.00020091845,0.000031053,0.0011155306,0.00014922452],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010655735,0.00010008966,0.001436461,0.012907823,0.00047509576,0.00062943314,0.000087841756,6.816889e-7,5.5015274e-8,0.00048691154,0.04819625,0.9356687],"study_design_scores_gemma":[0.001059669,0.00016448712,0.0033775892,0.041077737,0.0025524101,0.0012829023,0.0000044734675,0.0000015351865,0.0000026720131,0.019829493,0.93050975,0.00013728281],"about_ca_topic_score_codex":0.0000063497714,"about_ca_topic_score_gemma":0.0000027215217,"teacher_disagreement_score":0.93553144,"about_ca_system_score_codex":0.00008766286,"about_ca_system_score_gemma":0.00495945,"threshold_uncertainty_score":0.8797851},"labels":[],"label_agreement":null},{"id":"W2162444478","doi":"10.1172/jci22760","title":"A novel COL1A1 mutation in infantile cortical hyperostosis (Caffey disease) expands the spectrum of collagen-related disorders","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Osteomyelitis and Bone Disorders Research","field":"Medicine","cited_by":165,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"Canadian Arthritis Network; Eunice Kennedy Shriver National Institute of Child Health and Human Development; U.S. Public Health Service; National Institutes of Health; Lastentautien Tutkimussäätiö; Novo Nordisk; Canadian Institutes of Health Research; European Society for Paediatric Endocrinology; Massachusetts General Hospital","keywords":"Missense mutation; Hyperostosis; Exon; Locus (genetics); Pathology; Medicine; Biology; Genetics; Anatomy; Mutation; Gene","score_opus":0.050920442569240464,"score_gpt":0.3787556705562603,"score_spread":0.32783522798701986,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2162444478","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9736401,0.00031837798,0.00014653675,0.025111806,0.00015030398,0.00035975475,0.0000063746875,0.0000064371434,0.00026035216],"genre_scores_gemma":[0.99820745,0.00039040856,0.00053407386,0.0005160506,0.00021117598,0.00000581666,0.000013061741,0.000014599102,0.000107334316],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99689084,0.00025082845,0.0018402884,0.0001513981,0.00066893134,0.00019772476],"domain_scores_gemma":[0.99792194,0.0006804993,0.0006576281,0.0001793209,0.00025457476,0.00030602288],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020056083,0.00011106338,0.00049022865,0.00018199954,0.000057332192,0.000021827233,0.0001286727,0.00013969414,0.00010032308],"category_scores_gemma":[0.0040365905,0.00007511712,0.00026102306,0.0005094701,0.00045686838,0.00020598082,0.000030594536,0.00051460665,0.000008494626],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00247025,0.0016544029,0.94669425,0.000134024,0.0001637678,0.00003588108,0.0011036699,0.0011990549,0.013405172,0.0010191031,0.0011273064,0.030993108],"study_design_scores_gemma":[0.0050561037,0.001000952,0.98039824,0.00033738316,0.00012751977,0.000031910502,0.0003632288,0.009816731,0.0007665841,0.0013146338,0.0007009905,0.00008575242],"about_ca_topic_score_codex":0.000055022803,"about_ca_topic_score_gemma":0.00020258216,"teacher_disagreement_score":0.03370395,"about_ca_system_score_codex":0.00005060976,"about_ca_system_score_gemma":0.00059866445,"threshold_uncertainty_score":0.4832467},"labels":[],"label_agreement":null},{"id":"W2162894871","doi":"10.1172/jci58128","title":"Epoxyeicosanoids stimulate multiorgan metastasis and tumor dormancy escape in mice","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Eicosanoids and Hypertension Pharmacology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":291,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"NHLBI Division of Intramural Research; National Institute of Environmental Health Sciences; National Institute of General Medical Sciences; National Cancer Institute; National Institutes of Health; American Asthma Foundation; Welch Foundation","keywords":"Paracrine signalling; Metastasis; Autocrine signalling; Cancer research; Biology; Cancer; Cancer cell; Endogeny; Carcinogenesis; Receptor; Endocrinology; Biochemistry","score_opus":0.08813769381842418,"score_gpt":0.3625654560270484,"score_spread":0.27442776220862425,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2162894871","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99845463,0.00055084453,0.000113417474,0.00032554028,0.0003500279,0.00007821155,0.0000027798749,0.0000028874106,0.000121679586],"genre_scores_gemma":[0.99073124,0.00046614028,0.006736258,0.0017669646,0.00025075558,0.0000015331202,0.000005626532,0.000012121024,0.000029347904],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983458,0.00024895233,0.0009853285,0.00017645623,0.00010842326,0.00013503089],"domain_scores_gemma":[0.99895024,0.00006289538,0.0005107791,0.00009782896,0.00018566645,0.00019257065],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011571223,0.000108026135,0.0003151474,0.00009315288,0.00002996892,0.00000994282,0.000119630415,0.00013809266,0.00003736062],"category_scores_gemma":[0.00057365093,0.000087485416,0.000104723156,0.00008948297,0.00016577612,0.000018883005,0.000057527253,0.00026643125,0.0000041441135],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048119604,0.00028737646,0.25429446,0.000027967844,0.000121027704,0.000080018755,0.00017255245,0.000026451893,0.7362826,0.000111915855,0.0015959314,0.006518541],"study_design_scores_gemma":[0.0049216663,0.002022135,0.6146006,0.000072142604,0.00020233775,0.00026924795,0.00011757132,0.0012325246,0.37037504,0.001976436,0.0039086016,0.00030169662],"about_ca_topic_score_codex":0.000011714654,"about_ca_topic_score_gemma":0.00001648619,"teacher_disagreement_score":0.36590752,"about_ca_system_score_codex":0.00000456744,"about_ca_system_score_gemma":0.000108691995,"threshold_uncertainty_score":0.35675517},"labels":[],"label_agreement":null},{"id":"W2162919259","doi":"10.1172/jci14080","title":"The cardiac phenotype induced by PPARα overexpression mimics that caused by diabetes mellitus","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cardiovascular Function and Risk Factors","field":"Medicine","cited_by":878,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; U.S. Public Health Service; National Institutes of Health","keywords":"Diabetic cardiomyopathy; Internal medicine; Endocrinology; Peroxisome proliferator-activated receptor; Beta oxidation; Heart failure; Cardiomyopathy; Biology; Phenotype; Fatty acid metabolism; Glucose uptake; Fatty acid; Metabolism; Receptor; Insulin; Medicine; Gene; Biochemistry","score_opus":0.07587762791124153,"score_gpt":0.32346502885247663,"score_spread":0.2475874009412351,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2162919259","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98918027,0.004699633,0.00005683631,0.0038421263,0.001793221,0.00017126702,0.000007355807,0.000019990053,0.0002293336],"genre_scores_gemma":[0.9913638,0.0058973646,0.000101123645,0.0012225223,0.0008526462,0.0000024281287,0.000019751047,0.000023323973,0.00051699893],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9974589,0.00044615936,0.0010067497,0.00016364588,0.00072968355,0.00019491126],"domain_scores_gemma":[0.9974674,0.0008409599,0.0007340725,0.0002914516,0.00025870415,0.00040740508],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018004394,0.00014677247,0.0005747813,0.000045595036,0.00015070318,0.000055902136,0.000109729925,0.00026321603,0.000064649066],"category_scores_gemma":[0.0019088918,0.0000854524,0.0006797224,0.00015232165,0.00017904151,0.00018067693,0.000022052509,0.0007651227,0.000028084783],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017507125,0.00023473057,0.27522084,0.000036375284,0.0010063549,0.000004698725,0.00023831794,0.000011793571,0.08592237,0.00003823295,0.58548504,0.051626172],"study_design_scores_gemma":[0.005755557,0.001390006,0.2787486,0.0005792928,0.0012417263,0.000012324682,0.00027083416,0.0014161855,0.10036399,0.00064501155,0.6091578,0.00041868578],"about_ca_topic_score_codex":0.0000083066625,"about_ca_topic_score_gemma":6.362257e-7,"teacher_disagreement_score":0.051207487,"about_ca_system_score_codex":0.000056775818,"about_ca_system_score_gemma":0.000073021525,"threshold_uncertainty_score":0.34846476},"labels":[],"label_agreement":null},{"id":"W2163953596","doi":"10.1172/jci43273","title":"Prolyl hydroxylase 3 (PHD3) is essential for hypoxic regulation of neutrophilic inflammation in humans and mice","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cancer, Hypoxia, and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":195,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"NIHR Cambridge Biomedical Research Centre; Vlaamse regering; Science Foundation Ireland; National Institute for Health and Care Research; Wellcome Trust","keywords":"Inflammation; Hypoxia (environmental); Downregulation and upregulation; Apoptosis; In vivo; Biology; Mediator; Immunology; Hypoxia-inducible factors; Programmed cell death; Neutrophil extracellular traps; Cell biology; Chemistry; Biochemistry; Oxygen","score_opus":0.049708358268752466,"score_gpt":0.3249942535052365,"score_spread":0.275285895236484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2163953596","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99778485,0.00044259868,0.00078678975,0.00022319196,0.0005044559,0.0002021868,0.0000049926603,0.0000016324218,0.00004927359],"genre_scores_gemma":[0.9948957,0.00049740146,0.0027034155,0.000128842,0.0016842181,0.0000059297595,0.000016033024,0.000009922352,0.000058554324],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985531,0.0000985365,0.0009952558,0.0001440109,0.00011947787,0.000089623034],"domain_scores_gemma":[0.9986703,0.000041266245,0.00085706584,0.00011341414,0.0002334414,0.00008451673],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009252738,0.000081410166,0.0002464451,0.00008440923,0.00002312223,0.000007915495,0.000079613754,0.00017331772,0.000006279286],"category_scores_gemma":[0.0005052048,0.000075634205,0.00012292809,0.00006751759,0.00013831873,0.00002707454,0.000020025924,0.00010604262,3.608237e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005836824,0.000069143505,0.008797023,0.00006263305,0.000039638973,2.530994e-7,0.00039405812,0.0000439087,0.98149365,0.00025992523,0.0005403733,0.0077157263],"study_design_scores_gemma":[0.002853369,0.0008168268,0.25593707,0.0000801299,0.000106283325,0.000009587479,0.00004231706,0.00054841884,0.7259608,0.009355875,0.004159113,0.00013020649],"about_ca_topic_score_codex":0.000012754124,"about_ca_topic_score_gemma":0.00004786581,"teacher_disagreement_score":0.25553283,"about_ca_system_score_codex":0.0000058960936,"about_ca_system_score_gemma":0.0001295476,"threshold_uncertainty_score":0.30842733},"labels":[],"label_agreement":null},{"id":"W2164871064","doi":"10.1172/jci34862","title":"Glomerular type 1 angiotensin receptors augment kidney injury and inflammation in murine autoimmune nephritis","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Renal Diseases and Glomerulopathies","field":"Medicine","cited_by":94,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; University of Toronto","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; National Institutes of Health","keywords":"Lupus nephritis; Angiotensin II; Angiotensin II receptor type 1; Glomerulonephritis; Medicine; Internal medicine; Inflammation; Endocrinology; Kidney; Losartan; Renin–angiotensin system; Angiotensin receptor; Immunology; Receptor; Disease; Blood pressure","score_opus":0.03153582202775223,"score_gpt":0.342610950713206,"score_spread":0.3110751286854538,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2164871064","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97944194,0.0011583213,0.00002242496,0.018696526,0.00043262003,0.0001487282,0.0000018008003,0.000011848407,0.00008576472],"genre_scores_gemma":[0.9903494,0.0031529102,0.0030501955,0.0026491038,0.0006687083,6.7601724e-7,0.000023423581,0.000009031958,0.00009653889],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99786615,0.00015500246,0.001393509,0.00012998824,0.00032646063,0.00012888382],"domain_scores_gemma":[0.99852043,0.00008006269,0.00057340367,0.00012037877,0.00030103346,0.00040467753],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011484784,0.00011225477,0.00047371862,0.00021043998,0.000029544159,0.000026369851,0.000044781205,0.00014397087,0.000037325422],"category_scores_gemma":[0.003104449,0.00009087825,0.00013472965,0.00031575852,0.00011600494,0.0002742611,0.00001459492,0.00037086275,0.0000069719413],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003405197,0.0004974585,0.40597135,0.00023045907,0.00016405707,0.00032262874,0.0005138803,0.00008253565,0.049383,0.000917786,0.022541272,0.5159704],"study_design_scores_gemma":[0.0018943062,0.0019390751,0.9799719,0.0010296706,0.00010021751,0.00006967108,0.000027118705,0.0005221897,0.0014483213,0.0041409046,0.008757538,0.000099112825],"about_ca_topic_score_codex":0.000012032525,"about_ca_topic_score_gemma":9.74192e-7,"teacher_disagreement_score":0.57400054,"about_ca_system_score_codex":0.000044430326,"about_ca_system_score_gemma":0.00026913345,"threshold_uncertainty_score":0.37165397},"labels":[],"label_agreement":null},{"id":"W2165322090","doi":"10.1172/jci43004","title":"The biological activity of FasL in human and mouse lungs is determined by the structure of its stalk region","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Sepsis Diagnosis and Treatment","field":"Medicine","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Nutrition, Metabolism and Diabetes","funders":"National Institutes of Health; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; University of Washington; U.S. Department of Veterans Affairs","keywords":"Bronchoalveolar lavage; Fas ligand; In vivo; In vitro; Myeloperoxidase; Immunology; Proteases; Chemistry; Lung; Inflammation; Biology; Medicine; Apoptosis; Biochemistry; Programmed cell death; Internal medicine; Enzyme","score_opus":0.31747129465230095,"score_gpt":0.42651289571228734,"score_spread":0.10904160105998639,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165322090","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975447,0.00031592802,0.0000044811004,0.0018949065,0.00004800869,0.00016098331,0.000004344273,0.0000015812169,0.000025039588],"genre_scores_gemma":[0.99883926,0.00064990716,0.00011284879,0.00032241273,0.000050000235,9.3108866e-7,0.000001288068,0.000004053274,0.000019303254],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99865323,0.0002369024,0.0007796113,0.00008720469,0.00017209869,0.00007094951],"domain_scores_gemma":[0.9980553,0.00064412033,0.0009403524,0.00012957658,0.00014516462,0.00008547967],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006738566,0.00007372493,0.00034447838,0.00003096065,0.000036331585,0.0000053691283,0.00007657834,0.00012328073,0.00001181217],"category_scores_gemma":[0.0009853345,0.000032185795,0.00010973581,0.000071676186,0.0003289164,0.00007009617,0.000020257727,0.0002519465,1.165596e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045185385,0.00037617813,0.8876263,0.00002690532,0.00012287291,0.000008393181,0.0006947617,4.111262e-7,0.10168202,0.00022158977,0.0010019719,0.0077867233],"study_design_scores_gemma":[0.001233982,0.0013870319,0.7368955,0.000095341406,0.00007767012,0.000018659806,0.00007192966,0.000031369145,0.25823078,0.0018686503,0.000061017116,0.000028094426],"about_ca_topic_score_codex":0.000032545533,"about_ca_topic_score_gemma":0.000019746478,"teacher_disagreement_score":0.15654875,"about_ca_system_score_codex":0.000015274793,"about_ca_system_score_gemma":0.000047922236,"threshold_uncertainty_score":0.13124987},"labels":[],"label_agreement":null},{"id":"W2165895874","doi":"10.1172/jci33622","title":"Overexpression of ABCA1 reduces amyloid deposition in the PDAPP mouse model of Alzheimer disease","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Drug Transport and Resistance Mechanisms","field":"Medicine","cited_by":369,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Diabetes and Digestive and Kidney Diseases; Canadian Institutes of Health Research; Eli Lilly and Company; National Institute on Aging; National Institutes of Health; American Health Assistance Foundation","keywords":"ABCA1; Apolipoprotein E; Genetically modified mouse; Transgene; Endocrinology; Dentate gyrus; Alzheimer's disease; Internal medicine; Amyloid (mycology); Biology; Chemistry; Cell biology; Hippocampal formation; Medicine; Transporter; Biochemistry; Disease","score_opus":0.11995265806560154,"score_gpt":0.36319679272685146,"score_spread":0.24324413466124992,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165895874","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974167,0.0002838193,0.000792998,0.0011266646,0.0000841588,0.00015632597,0.000006045819,0.0000034350855,0.00012986119],"genre_scores_gemma":[0.9939407,0.00040018675,0.005116455,0.0003108411,0.0001452274,0.0000018683977,0.000012402789,0.000008343311,0.00006397485],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976893,0.00013600751,0.0014545703,0.00009369714,0.00054305815,0.000083332234],"domain_scores_gemma":[0.9983655,0.00012974926,0.00096733915,0.00015142177,0.00022714704,0.00015882737],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010263608,0.00008194073,0.00040330726,0.00009729055,0.000029758912,0.0000026443536,0.00010333959,0.00010108647,0.0000080315795],"category_scores_gemma":[0.00028167848,0.000048737245,0.00024275146,0.00012550362,0.00023635036,0.00016758888,0.000006165372,0.00030601138,8.8338845e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029637169,0.0013368817,0.057207953,0.0001824768,0.000121195124,0.000057899095,0.0014734387,0.0049401927,0.9290098,0.00067368697,0.001041018,0.0009917252],"study_design_scores_gemma":[0.003917504,0.00074578,0.28505236,0.0019402226,0.00059676217,0.00003340011,0.00027995254,0.012234355,0.68717194,0.007860533,0.000025777506,0.00014139376],"about_ca_topic_score_codex":0.000005506956,"about_ca_topic_score_gemma":0.0000015576065,"teacher_disagreement_score":0.24183784,"about_ca_system_score_codex":0.0000091744405,"about_ca_system_score_gemma":0.00029335683,"threshold_uncertainty_score":0.19874473},"labels":[],"label_agreement":null},{"id":"W2166044131","doi":"10.1172/jci15463","title":"Circulating levels of IGF-1 directly regulate bone growth and density","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Growth Hormone and Insulin-like Growth Factors","field":"Medicine","cited_by":846,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Novo Nordisk; National Institutes of Health; Aarhus Universitet","keywords":"Endocrinology; Internal medicine; Bone growth; Protein subunit; Pathophysiology; Growth factor; Osteoporosis; Endocrine system; Chemistry; Biology; Receptor; Gene; Medicine; Biochemistry; Hormone","score_opus":0.12298556000926676,"score_gpt":0.33974059068095425,"score_spread":0.2167550306716875,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2166044131","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99617714,0.0005326145,0.00014826503,0.0021178625,0.0002581636,0.00010693429,0.0000021425426,0.000013310229,0.0006435922],"genre_scores_gemma":[0.994886,0.00026080402,0.0037010417,0.00063097564,0.0004340692,3.714855e-7,0.0000014444875,0.000015222043,0.000070092574],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9970887,0.00017735432,0.0019700492,0.00016312211,0.00044666798,0.00015414515],"domain_scores_gemma":[0.99706715,0.0005223717,0.0013929524,0.00015367375,0.0004815321,0.000382293],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014285411,0.00013251785,0.00076454075,0.00015714431,0.000054068925,0.000014757718,0.00006268255,0.00020541983,0.00003598805],"category_scores_gemma":[0.0051070936,0.00010562712,0.00024102097,0.00023753439,0.00029625933,0.00030115966,0.000029363819,0.00051206513,0.0000040554696],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002136774,0.00026369756,0.8506914,0.00025635553,0.00023755222,0.00016671333,0.00078113476,0.0000053901053,0.12581295,0.00061386847,0.0014340323,0.019523242],"study_design_scores_gemma":[0.0020563072,0.0008192293,0.95976585,0.00035028512,0.00024935344,0.00040159273,0.000041725394,0.0011107068,0.031227894,0.003789717,0.00007443634,0.0001128704],"about_ca_topic_score_codex":0.000012552441,"about_ca_topic_score_gemma":9.915817e-7,"teacher_disagreement_score":0.10907449,"about_ca_system_score_codex":0.00001994985,"about_ca_system_score_gemma":0.000082796854,"threshold_uncertainty_score":0.6114037},"labels":[],"label_agreement":null},{"id":"W2166355332","doi":"10.1172/jci45636","title":"Extracellular matrix proteases contribute to progression of pelvic organ prolapse in mice and humans","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pelvic floor disorders treatments","field":"Medicine","cited_by":145,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Heart, Lung, and Blood Institute; Welch Foundation; National Institute on Aging; National Institutes of Health; American Heart Association","keywords":"Fibulin; Extracellular matrix; Matricellular protein; Fibronectin; Matrix metalloproteinase; Downregulation and upregulation; Integrin; Cell biology; Elastic fiber; Proteases; Biology; Medicine; Pathology; Internal medicine; Biochemistry; Receptor; Enzyme","score_opus":0.07295887167957309,"score_gpt":0.3860493098195082,"score_spread":0.3130904381399351,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2166355332","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963238,0.0015401272,0.000105165804,0.0011019028,0.00009562047,0.00077755185,0.000002785773,0.00000794311,0.000045080425],"genre_scores_gemma":[0.9859976,0.00007931045,0.013563801,0.000098738084,0.000087686625,0.000009616403,0.000004746304,0.000013553498,0.00014493501],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977302,0.00019300597,0.00144877,0.00015873997,0.00032840396,0.00014086356],"domain_scores_gemma":[0.99820054,0.00014023547,0.0008769972,0.00013098004,0.00032475832,0.0003265181],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013713811,0.0001161683,0.0005534466,0.00018592113,0.000021082007,0.000007374785,0.00007942666,0.00013993171,0.00003357022],"category_scores_gemma":[0.0025900067,0.0000858727,0.00009586833,0.00020589822,0.00015786535,0.00017782711,0.00002744062,0.00029911532,0.000006376035],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015783204,0.0010712679,0.9636592,0.00017608491,0.00008373131,0.00012739096,0.0011508072,0.0000019041686,0.025655761,0.00013221272,0.00020411643,0.006159173],"study_design_scores_gemma":[0.00835675,0.004621924,0.9573884,0.0017528185,0.00027317854,0.00008528863,0.00019234102,0.00012177525,0.024153424,0.0027177187,0.00021816889,0.0001182375],"about_ca_topic_score_codex":0.000028975324,"about_ca_topic_score_gemma":0.000017154172,"teacher_disagreement_score":0.013458635,"about_ca_system_score_codex":0.000033601595,"about_ca_system_score_gemma":0.00024498007,"threshold_uncertainty_score":0.3501787},"labels":[],"label_agreement":null},{"id":"W2167612600","doi":"10.1172/jci27352","title":"Intestinal ABCA1 directly contributes to HDL biogenesis in vivo","year":2006,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cholesterol and Lipid Metabolism","field":"Medicine","cited_by":513,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child and Family Research Institute; University of British Columbia","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; Canadian Institutes of Health Research; National Institutes of Health; Heart and Stroke Foundation of Canada","keywords":"ABCA1; Biogenesis; In vivo; Cholesterol; Reverse cholesterol transport; Biology; Chylomicron; Apolipoprotein B; Tangier disease; Endocrinology; Internal medicine; Chemistry; Lipoprotein; Cell biology; Biochemistry; Transporter; Medicine; Genetics; Very low-density lipoprotein","score_opus":0.05412170132786905,"score_gpt":0.3633503876367106,"score_spread":0.3092286863088416,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2167612600","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9872439,0.0003685158,0.00042892745,0.010453593,0.0008175583,0.00015803553,0.0000032584626,0.0000137665675,0.0005124318],"genre_scores_gemma":[0.9885581,0.000044704928,0.005244364,0.0035891815,0.0021378133,0.0000032282428,0.0000037737705,0.00001343538,0.00040538685],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9973925,0.00016916048,0.0018080556,0.00015302288,0.00030683033,0.0001704701],"domain_scores_gemma":[0.9980984,0.00053643476,0.00054894533,0.00013430108,0.00039774217,0.0002842326],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020473767,0.00011743656,0.00065067894,0.00029710855,0.00002291052,0.000026402502,0.000096656506,0.00013344751,0.000033057753],"category_scores_gemma":[0.003946397,0.00008981187,0.00021123758,0.00043187852,0.000116140305,0.00013100226,0.000022449296,0.00036132179,0.000017976748],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00054562977,0.0003158051,0.9012428,0.000029424507,0.000036644,0.00006086582,0.00004735322,0.00007655388,0.069413275,0.0004644515,0.013940498,0.013826698],"study_design_scores_gemma":[0.002864046,0.00039247877,0.9292232,0.00046937904,0.00012061226,0.00008387842,0.000020897,0.00013301255,0.02948685,0.0029796099,0.03414045,0.000085597036],"about_ca_topic_score_codex":0.00015167109,"about_ca_topic_score_gemma":0.000089297886,"teacher_disagreement_score":0.03992643,"about_ca_system_score_codex":0.00004625857,"about_ca_system_score_gemma":0.00022940441,"threshold_uncertainty_score":0.4724491},"labels":[],"label_agreement":null},{"id":"W2167793118","doi":"10.1172/jci17993","title":"Polymorphisms in Chlamydia trachomatis tryptophan synthase genes differentiate between genital and ocular isolates","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":306,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Health Canada","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Health Canada","keywords":"Chlamydia trachomatis; Tryptophan synthase; Biology; Chlamydiae; Trachoma; Microbiology; Pathogen; Serotype; Gene; Chlamydia; Virology; ATP synthase; Immunology; Genetics; Escherichia coli; Medicine; Pathology","score_opus":0.06918561307642289,"score_gpt":0.3615554809031053,"score_spread":0.2923698678266824,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2167793118","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99541175,0.0032173402,0.00029380494,0.00034054116,0.00050381024,0.00014911007,0.0000054484562,0.000009512452,0.00006864982],"genre_scores_gemma":[0.9988169,0.0003435093,0.00052719313,0.000030688192,0.00014288847,0.000003768691,0.000008581307,0.000012728882,0.000113748785],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9970616,0.001172094,0.0012571465,0.00022219108,0.00007302542,0.0002139229],"domain_scores_gemma":[0.99808645,0.0009601491,0.0005242702,0.0001689041,0.0001695506,0.00009067127],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021773642,0.00013395389,0.0004901863,0.0002762169,0.00009021563,0.000033086235,0.00011402484,0.00029946468,0.00014189981],"category_scores_gemma":[0.0034271486,0.00010946975,0.00015146182,0.00020609304,0.00044529806,0.0003394584,0.000022197715,0.00081734476,0.000040024745],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005214751,0.00016256038,0.8454715,0.000010052393,0.00017184883,0.000009902061,0.00011798161,0.000006147142,0.13848358,0.0002152836,0.000057171008,0.015241829],"study_design_scores_gemma":[0.0014210399,0.00027654073,0.8900084,0.00004683254,0.00006118291,0.00015645383,0.000040947547,0.000007317067,0.103655554,0.0038362266,0.00038469114,0.000104831895],"about_ca_topic_score_codex":0.000027304899,"about_ca_topic_score_gemma":0.0000066470807,"teacher_disagreement_score":0.044536892,"about_ca_system_score_codex":0.000029165963,"about_ca_system_score_gemma":0.00013577068,"threshold_uncertainty_score":0.4464047},"labels":[],"label_agreement":null},{"id":"W2168279415","doi":"10.1172/jci77126","title":"Energy homeostasis targets chromosomal reconfiguration of the human GH1 locus","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Growth Hormone and Insulin-like Growth Factors","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Canadian Institutes of Health Research; University of Manitoba","keywords":"Biology; Endocrinology; Internal medicine; Hyperinsulinemia; Energy homeostasis; Chromatin; Glucose homeostasis; Locus (genetics); Homeostasis; Insulin; Insulin resistance; Gene; Genetics; Obesity","score_opus":0.052866780544756874,"score_gpt":0.33037875594965604,"score_spread":0.2775119754048992,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168279415","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935636,0.00015210525,0.0005636394,0.0037154006,0.0007486533,0.000086519256,0.0000020997952,0.000009057649,0.0011589571],"genre_scores_gemma":[0.99690235,0.00009066934,0.00047915863,0.0012863587,0.0010917148,0.0000012486729,0.000010072945,0.000015128598,0.0001232904],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9969062,0.0003564174,0.0019601,0.00013694794,0.00050140265,0.00013893736],"domain_scores_gemma":[0.9968554,0.0002753038,0.0017785798,0.0002614652,0.0005802864,0.00024896127],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014783937,0.0001262915,0.00056790485,0.00011331963,0.00008955807,0.0000150509995,0.00016705706,0.00022032384,0.00004843285],"category_scores_gemma":[0.0022727193,0.00007909797,0.00039014575,0.00023383192,0.00026439902,0.00024105057,0.000024010664,0.0004444331,0.000004933092],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00055601296,0.00083434314,0.5869764,0.00022639315,0.000473681,0.000017850032,0.0007421519,0.00005978992,0.26932997,0.009022687,0.028578121,0.10318258],"study_design_scores_gemma":[0.0027769427,0.0022286843,0.7480379,0.00034935618,0.0003132091,0.00006323133,0.00007089046,0.00051107,0.22518757,0.01075833,0.009552725,0.00015012683],"about_ca_topic_score_codex":0.000029273404,"about_ca_topic_score_gemma":0.0000076152432,"teacher_disagreement_score":0.16106145,"about_ca_system_score_codex":0.000032221807,"about_ca_system_score_gemma":0.00022252882,"threshold_uncertainty_score":0.32255214},"labels":[],"label_agreement":null},{"id":"W2168597028","doi":"10.1172/jci64516","title":"Inhibition of GSK3β-mediated BACE1 expression reduces Alzheimer-associated phenotypes","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Alzheimer's disease research and treatments","field":"Medicine","cited_by":435,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; University of British Columbia","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; National Natural Science Foundation of China; Michael Smith Health Research BC","keywords":"GSK-3; Amyloid precursor protein secretase; Amyloid precursor protein; Senile plaques; GSK3B; Alzheimer's disease; BACE1-AS; Glycogen synthase; Gene isoform; Transgene; Biology; Cell biology; Pathogenesis; Phenotype; Neuropathology; Signal transduction; Tau protein; Neuroscience; Genetically modified mouse; Gene; Medicine; Biochemistry; Disease; Phosphorylation; Internal medicine; Immunology","score_opus":0.1440323869757492,"score_gpt":0.42070024730850736,"score_spread":0.27666786033275814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168597028","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99344254,0.004830254,0.000016304628,0.0007808312,0.00031012876,0.00020309271,0.000011154949,0.00001571608,0.00038995736],"genre_scores_gemma":[0.9975273,0.0003094953,0.0012509488,0.00018966263,0.00060056295,0.000003444732,0.000091294016,0.000016843724,0.000010471731],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9971224,0.0004103073,0.0013744507,0.000114988296,0.0007355293,0.00024229598],"domain_scores_gemma":[0.99641675,0.00064011826,0.0013532442,0.00013476597,0.0006565065,0.0007986386],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017627137,0.00012757303,0.0005424709,0.0001508768,0.000051430376,0.000010580566,0.000060523173,0.00020362817,0.00011881036],"category_scores_gemma":[0.003745912,0.00009087955,0.00027440893,0.00024730313,0.0002425356,0.0004976668,0.000027085935,0.00038957674,0.000038297294],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022331106,0.004535399,0.9051853,0.000077305194,0.008000891,0.000055020573,0.00059064466,0.000008310196,0.06354412,0.00010589471,0.007853699,0.007810316],"study_design_scores_gemma":[0.0067175888,0.0021632507,0.7190589,0.0011606421,0.0022635788,0.000030446643,0.00022172446,0.00014810076,0.26601154,0.0018951462,0.0001569192,0.00017218798],"about_ca_topic_score_codex":0.000008722631,"about_ca_topic_score_gemma":7.4281445e-7,"teacher_disagreement_score":0.20246743,"about_ca_system_score_codex":0.000041771087,"about_ca_system_score_gemma":0.00036118354,"threshold_uncertainty_score":0.44844773},"labels":[],"label_agreement":null},{"id":"W2168964544","doi":"10.1172/jci57275","title":"Antagonism of miR-33 in mice promotes reverse cholesterol transport and regression of atherosclerosis","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cholesterol and Lipid Metabolism","field":"Medicine","cited_by":684,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Heart, Lung, and Blood Institute; Canadian Institutes of Health Research; National Institute on Aging; National Institutes of Health","keywords":"Antagonism; Reverse cholesterol transport; Cholesterol; Regression; Biology; Cell biology; Chemistry; Medicine; Internal medicine; Endocrinology; Receptor; Lipoprotein; Mathematics; Statistics","score_opus":0.12790930240350054,"score_gpt":0.35610709569500604,"score_spread":0.2281977932915055,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168964544","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99872905,0.00014178526,0.000028736626,0.0005789012,0.00027101857,0.00016519104,0.000005666723,0.0000035635398,0.00007608884],"genre_scores_gemma":[0.9951932,0.00048855937,0.003772221,0.00030251412,0.00018694604,0.0000010490153,0.0000028657778,0.000011495073,0.000041148855],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99747306,0.00015612575,0.0018545717,0.00013428368,0.00028346395,0.00009847223],"domain_scores_gemma":[0.99796844,0.00012626016,0.0013460893,0.00013832263,0.00022092383,0.00019996359],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017053054,0.000112460424,0.00075718807,0.00014633137,0.000011613011,0.000002378637,0.00007982018,0.00018649039,0.000014460809],"category_scores_gemma":[0.0005172945,0.00007689348,0.00017732552,0.00014402533,0.000305535,0.00022193322,0.000012814002,0.0003853557,6.205799e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005677916,0.00041220756,0.7651383,0.00021946894,0.00004057828,0.0000057375605,0.0023835974,5.286737e-7,0.2262829,0.000031109437,0.000051707448,0.004866067],"study_design_scores_gemma":[0.0033855245,0.0007137768,0.8781254,0.0015167865,0.00016536399,0.000032300253,0.00011508783,0.000025208037,0.11525599,0.00043008712,0.00018038745,0.00005406371],"about_ca_topic_score_codex":0.00006734562,"about_ca_topic_score_gemma":0.00001095214,"teacher_disagreement_score":0.11298711,"about_ca_system_score_codex":0.0000081241615,"about_ca_system_score_gemma":0.00011731555,"threshold_uncertainty_score":0.31356248},"labels":[],"label_agreement":null},{"id":"W2169338224","doi":"10.1172/jci32849","title":"Impaired parasympathetic function increases susceptibility to inflammatory bowel disease in a mouse model of depression","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Vagus Nerve Stimulation Research","field":"Neuroscience","cited_by":234,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Crohn's and Colitis Foundation of Canada; Canadian Association of Gastroenterology; Crohn's and Colitis Foundation; McMaster University; Institut de France","keywords":"Vagus nerve; Tricyclic; Inflammation; Inflammatory bowel disease; Medicine; Colitis; Tonic (physiology); Monoamine neurotransmitter; Irritable bowel syndrome; Proinflammatory cytokine; Tricyclic antidepressant; Imipramine; Antidepressant; Internal medicine; Immunology; Pharmacology; Endocrinology; Disease; Serotonin; Pathology; Receptor; Stimulation; Hippocampus","score_opus":0.1671487793872885,"score_gpt":0.39573078579665344,"score_spread":0.22858200640936494,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2169338224","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99750745,0.000016723629,0.0016915534,0.00032802735,0.00009897238,0.00030958003,0.000011112924,0.000017585076,0.000019007664],"genre_scores_gemma":[0.9987085,0.000036634072,0.0006939657,0.00037283805,0.00009593668,0.0000071597115,0.0000015900833,0.000014442704,0.00006893936],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.995703,0.0010174458,0.0019109406,0.000294154,0.0008787799,0.00019570926],"domain_scores_gemma":[0.9966507,0.0011563094,0.0008552893,0.00032658057,0.00035160378,0.0006595255],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0022641541,0.00012634709,0.00035383503,0.00032713858,0.00007986854,0.0000153784,0.00025620003,0.00011344767,0.000021564634],"category_scores_gemma":[0.022622673,0.00010647656,0.00021424996,0.00032531668,0.00034495196,0.0005274239,0.00008097882,0.00043088113,0.000011828747],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011097331,0.00032952602,0.70889944,0.000030958116,0.0000028428124,0.00001932413,0.0001268355,0.16133061,0.1277111,0.00004953543,0.00009503724,0.00029504843],"study_design_scores_gemma":[0.0011864192,0.00034766272,0.7451634,0.00010660903,0.000012965057,0.00000591381,0.000010275097,0.21917507,0.030122194,0.0037698108,0.0000033635608,0.000096348944],"about_ca_topic_score_codex":0.000030254478,"about_ca_topic_score_gemma":0.00001783236,"teacher_disagreement_score":0.097588904,"about_ca_system_score_codex":0.00007232537,"about_ca_system_score_gemma":0.00068115053,"threshold_uncertainty_score":0.9856102},"labels":[],"label_agreement":null},{"id":"W2170451911","doi":"10.1172/jci15506","title":"Deletion of phosphodiesterase 4D in mice shortens α2-adrenoceptor–mediated anesthesia, a behavioral correlate of emesis","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Phosphodiesterase function and regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":266,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Merck Canada Inc. (Canada)","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Child Health and Human Development","keywords":"Rolipram; Xylazine; Phosphodiesterase; Pentobarbital; Ketamine; Pharmacology; Endocrinology; Chemistry; Internal medicine; Anesthesia; Medicine; Enzyme; Biochemistry","score_opus":0.05860576188850777,"score_gpt":0.32529729899747234,"score_spread":0.2666915371089646,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2170451911","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99833995,0.00051757344,0.000284474,0.0004234738,0.00029104928,0.000105944964,0.000004555068,0.0000031908924,0.000029769657],"genre_scores_gemma":[0.9979416,0.00035443547,0.0011467206,0.00025646007,0.00014065646,0.0000020377186,0.000043422544,0.000012266168,0.00010236534],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9976151,0.00022274659,0.0016441902,0.00015761425,0.00024330754,0.00011706739],"domain_scores_gemma":[0.997869,0.0001255988,0.0013252668,0.00014242006,0.00041444087,0.00012328496],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008236397,0.00012145727,0.00039414837,0.00011335563,0.000025602647,0.000009465061,0.00011043971,0.00027557308,0.00007124355],"category_scores_gemma":[0.0006503143,0.00010777332,0.00021569499,0.00018404792,0.00026004802,0.000025743864,0.000017443908,0.00020225174,0.0000025053516],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012123737,0.0013581784,0.5668013,0.000088743254,0.00014905834,0.000038560935,0.00073516514,0.0014527106,0.41163906,0.000060281593,0.005880305,0.010584253],"study_design_scores_gemma":[0.0059852144,0.0042567644,0.64089245,0.00049805595,0.0003025656,0.00020652227,0.0003266236,0.0065074954,0.3367572,0.00039385358,0.0034265455,0.00044669097],"about_ca_topic_score_codex":0.000027913984,"about_ca_topic_score_gemma":0.00003231209,"teacher_disagreement_score":0.07488185,"about_ca_system_score_codex":0.000017901175,"about_ca_system_score_gemma":0.00009770857,"threshold_uncertainty_score":0.43948683},"labels":[],"label_agreement":null},{"id":"W2171141151","doi":"10.1172/jci63735","title":"Cancer susceptibility and embryonic lethality in Mob1a/1b double-mutant mice","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Hippo pathway signaling and YAP/TAZ","field":"Biochemistry, Genetics and Molecular Biology","cited_by":153,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"Kitasato University; Astellas Foundation for Research on Metabolic Disorders; Yasuda Memorial Medical Foundation; Cosmetology Research Foundation; Astellas Pharma; Ono Medical Research Foundation; Ministry of Education, Culture, Sports, Science and Technology; Uehara Memorial Foundation; Fukuoka Foundation for Sound Health; Sumitomo Foundation; Naito Foundation","keywords":"YAP1; Hippo signaling pathway; Biology; Embryonic stem cell; Cell biology; Progenitor cell; Keratinocyte; Cancer research; Mutant; Signal transduction; Stem cell; Cell culture; Genetics; Transcription factor","score_opus":0.08975450023300949,"score_gpt":0.39451814850092626,"score_spread":0.3047636482679168,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2171141151","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99674165,0.0016707155,0.00011006824,0.0008550846,0.0004681623,0.00008077477,0.0000047772155,0.000002896813,0.00006588594],"genre_scores_gemma":[0.99747455,0.00047931672,0.0005419399,0.0004435204,0.0009828461,0.000002673484,0.0000071053723,0.000008839239,0.00005921679],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99832374,0.00030684881,0.00084975,0.00016553848,0.00016366335,0.0001904819],"domain_scores_gemma":[0.9988523,0.00009489725,0.00048776728,0.00014500022,0.00015562643,0.00026438033],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0036301978,0.00010276661,0.00027391125,0.000037202295,0.000033295903,0.000015935531,0.000102598424,0.0002329899,0.000012111104],"category_scores_gemma":[0.0006864116,0.00008498087,0.00011316476,0.000081808335,0.00018552906,0.000020801523,0.00003845485,0.00034228136,0.0000024180622],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021140056,0.00011585976,0.45000035,0.000022568105,0.000027763785,0.0000015610333,0.00010743879,0.000050535633,0.5477043,0.000040825686,0.00008868258,0.0016287399],"study_design_scores_gemma":[0.004281275,0.0007181571,0.5726212,0.00017823355,0.000090738344,0.000056033277,0.00014975516,0.00018889815,0.41399866,0.0011958567,0.00620436,0.00031678978],"about_ca_topic_score_codex":0.00006923879,"about_ca_topic_score_gemma":0.00012334384,"teacher_disagreement_score":0.13370562,"about_ca_system_score_codex":0.00002171054,"about_ca_system_score_gemma":0.00023330696,"threshold_uncertainty_score":0.34654194},"labels":[],"label_agreement":null},{"id":"W2171559522","doi":"10.1172/jci16233","title":"Vpr R77Q is associated with long-term nonprogressive HIV infection and impaired induction of apoptosis","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":196,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Health Canada; University of Ottawa","funders":"Université de Montréal; Canadian Institutes of Health Research; Ontario HIV Treatment Network; Canadian Foundation for AIDS Research; Doris Duke Charitable Foundation","keywords":"Biology; Virology; Immune system; Vesicular stomatitis virus; Apoptosis; Viral replication; Programmed cell death; Virus; Cell biology; Immunology; Genetics","score_opus":0.06288228138622284,"score_gpt":0.35845517642185576,"score_spread":0.2955728950356329,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2171559522","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987382,0.00032586142,0.0001035913,0.000384088,0.00023071488,0.00013812601,0.000009624419,0.0000073744777,0.00006239432],"genre_scores_gemma":[0.9992896,0.0002580666,0.00016787327,0.00005394957,0.000035025274,0.0000037466682,0.000038475042,0.00000701377,0.00014629339],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99829036,0.0006213111,0.0007308594,0.00012407242,0.00009106381,0.00014233487],"domain_scores_gemma":[0.9980813,0.0003354984,0.0010153833,0.000086886976,0.00040224672,0.00007862948],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010425043,0.00009798739,0.00035851193,0.00011274997,0.00007819002,0.000012757825,0.000042339903,0.00024397943,0.00007885519],"category_scores_gemma":[0.0014848309,0.00006763712,0.00009964915,0.0001634302,0.0004172891,0.00021109918,0.000010711181,0.00039286425,0.000017062659],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025757236,0.00032727586,0.98064387,0.000015389429,0.00066551747,0.0000054014017,0.00020858414,0.000002794335,0.010619149,0.000040893647,0.00077790953,0.006435628],"study_design_scores_gemma":[0.0036646866,0.0021928959,0.89571476,0.00021616093,0.00018011156,0.00009055257,0.00003108309,0.000001953208,0.09739818,0.0003287106,0.00010831197,0.00007261398],"about_ca_topic_score_codex":0.0000125837105,"about_ca_topic_score_gemma":0.000012441101,"teacher_disagreement_score":0.08677903,"about_ca_system_score_codex":0.00004002265,"about_ca_system_score_gemma":0.0002003786,"threshold_uncertainty_score":0.27581617},"labels":[],"label_agreement":null},{"id":"W2171752682","doi":"10.1172/jci38454","title":"Targeted electrode-based modulation of neural circuits for depression","year":2009,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Neurological disorders and treatments","field":"Medicine","cited_by":538,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; National Institute of Mental Health; National Alliance for Research on Schizophrenia and Depression; Emory University; Woodruff Foundation","keywords":"Neurochemical; Neuromodulation; Neuroscience; Neuroimaging; Deep brain stimulation; Conceptualization; Biological neural network; Depression (economics); Psychology; Medicine; Stimulation; Computer science; Artificial intelligence","score_opus":0.20780268587559758,"score_gpt":0.4536645806105857,"score_spread":0.2458618947349881,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2171752682","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.014974772,0.9815341,0.0013068628,0.00047250077,0.00038530907,0.001251739,0.000014946926,0.000016131879,0.000043606316],"genre_scores_gemma":[0.04798009,0.9477379,0.0022799852,0.0010716004,0.00059462903,0.000017226032,0.0002457386,0.00003843883,0.000034443587],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.996307,0.00033303068,0.0026051875,0.00023151304,0.00036730448,0.00015596321],"domain_scores_gemma":[0.99495494,0.00090965483,0.0032994365,0.00018627653,0.00041992453,0.0002297466],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007827887,0.00023229317,0.0021699506,0.00018954373,0.00003255213,0.000009910534,0.00011085346,0.00047254632,0.000011055108],"category_scores_gemma":[0.002641815,0.00014626441,0.0012976857,0.00022162714,0.000081842234,0.00008754136,0.0000074473214,0.00056808314,0.0000015153837],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019501362,0.0004123463,0.0015866718,0.001990528,0.00014653626,0.000015654348,0.0000022604759,0.000050333576,0.00004549441,0.000018265493,0.0005388391,0.99499804],"study_design_scores_gemma":[0.053058874,0.07646453,0.19469161,0.08604517,0.041584786,0.0004346871,0.000007481664,0.029394198,0.0009853774,0.0785855,0.4365405,0.0022072745],"about_ca_topic_score_codex":8.849894e-7,"about_ca_topic_score_gemma":2.7274118e-7,"teacher_disagreement_score":0.99279076,"about_ca_system_score_codex":0.000034236342,"about_ca_system_score_gemma":0.0004919779,"threshold_uncertainty_score":0.59644896},"labels":[],"label_agreement":null},{"id":"W2171932269","doi":"10.1172/jci41940","title":"Increased SRF transcriptional activity in human and mouse skeletal muscle is a signature of insulin resistance","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":110,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"U.S. National Library of Medicine; National Institute of Diabetes and Digestive and Kidney Diseases; National Institutes of Health; University of Toronto; Joslin Diabetes Center","keywords":"Insulin resistance; Skeletal muscle; Internal medicine; Endocrinology; Serum response factor; Insulin receptor; Insulin; Biology; Coactivator; Actin cytoskeleton; Downregulation and upregulation; Gene expression; Medicine; Transcription factor; Cytoskeleton; Cell; Gene; Genetics","score_opus":0.06425576819263791,"score_gpt":0.34681984230249724,"score_spread":0.28256407410985934,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2171932269","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.999187,0.00026775108,0.00015240238,0.00019591015,0.000026564421,0.00006145167,0.000007958638,0.0000010541077,0.00009988532],"genre_scores_gemma":[0.99795115,0.00016429117,0.0014433078,0.00016525258,0.000109406086,0.0000011011124,0.0000051596285,0.0000058996893,0.00015443943],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99884015,0.00020886582,0.000551667,0.0001226307,0.00018289825,0.00009378676],"domain_scores_gemma":[0.9992284,0.00004448888,0.0003402829,0.00009478053,0.00015444082,0.0001375621],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011336085,0.00006540385,0.0001976985,0.00006007542,0.000025413823,0.0000065209274,0.000098060606,0.00016864626,0.000012523168],"category_scores_gemma":[0.00056534715,0.000056764646,0.00009835747,0.00007061864,0.00019714455,0.00001890397,0.000017769413,0.00030621362,2.1141781e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029262452,0.00012075622,0.017762572,0.000026071388,0.000023109262,0.000004009696,0.00009242592,0.00000167217,0.9803066,0.00012863523,0.00018665392,0.0010548647],"study_design_scores_gemma":[0.0014484824,0.0005829634,0.6428209,0.000063692154,0.000011335673,0.0000028245795,0.000028435823,0.00006333705,0.35317007,0.0013535612,0.00038261386,0.00007178312],"about_ca_topic_score_codex":0.00005113386,"about_ca_topic_score_gemma":0.00009941229,"teacher_disagreement_score":0.6271365,"about_ca_system_score_codex":0.0000068430086,"about_ca_system_score_gemma":0.0001272274,"threshold_uncertainty_score":0.23147951},"labels":[],"label_agreement":null},{"id":"W2171980060","doi":"10.1172/jci45523","title":"GLI3 repressor controls functional development of the mouse ureter","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Renal and related cancers","field":"Biochemistry, Genetics and Molecular Biology","cited_by":91,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"Canadian Institutes of Health Research; Hospital for Sick Children; Kidney Foundation of Canada","keywords":"Repressor; GLI3; Ureter; Biology; Anatomy; Medicine; Internal medicine; Urology; Genetics; Gene; Transcription factor","score_opus":0.08275085066315363,"score_gpt":0.3133878142772442,"score_spread":0.23063696361409058,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2171980060","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979139,0.00014330623,0.0007491172,0.00020613239,0.0004366018,0.000051155817,0.0000010238595,0.0000010878892,0.00049770233],"genre_scores_gemma":[0.99645936,0.000050029463,0.0022719938,0.00046450336,0.00028974892,0.0000014381783,0.0000032659827,0.0000049735177,0.0004546522],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99878687,0.000102895836,0.0008009908,0.00008264991,0.00016567323,0.00006092856],"domain_scores_gemma":[0.99883676,0.000024088058,0.0007345144,0.000114976945,0.00021649746,0.00007314636],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006595061,0.000054893237,0.00014187931,0.000015155848,0.000033021333,0.0000036088668,0.00012215473,0.00014279198,0.000019906369],"category_scores_gemma":[0.00044442396,0.000030882235,0.00017605408,0.00003744076,0.00015698558,0.000005555487,0.000028889379,0.00017280364,0.0000017437455],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011173278,0.00014693096,0.09942698,0.000023480172,0.0005619261,0.0000019062227,0.0003141275,0.00026920432,0.88313174,0.00021515673,0.0077584055,0.0070328126],"study_design_scores_gemma":[0.0010580634,0.00026116613,0.15779261,0.000047832524,0.000050329792,0.000015203029,0.000021695078,0.000023396347,0.8312153,0.0007993111,0.008647632,0.00006743885],"about_ca_topic_score_codex":0.0000015649904,"about_ca_topic_score_gemma":0.0000017745626,"teacher_disagreement_score":0.05836563,"about_ca_system_score_codex":0.0000063931866,"about_ca_system_score_gemma":0.00026427826,"threshold_uncertainty_score":0.1259341},"labels":[],"label_agreement":null},{"id":"W2173898107","doi":"10.1172/jci85004","title":"cAMP-independent effects of GLP-1 on β cells","year":2015,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"University of Alberta; Canadian Diabetes Association","keywords":"Incretin; Glucagon-like peptide-1; Insulin; Postprandial; Endocrinology; Internal medicine; Secretion; Diabetes mellitus; Islet; Hormone; Type 2 diabetes; Biology; Medicine","score_opus":0.08185036978054291,"score_gpt":0.36278020730948857,"score_spread":0.2809298375289456,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2173898107","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.66650933,0.0005321616,0.000082897335,0.32027522,0.008630482,0.00054779113,0.00001129864,0.000024199895,0.0033866158],"genre_scores_gemma":[0.05093163,0.000255217,0.0020863346,0.9228968,0.019563036,0.0000057807247,0.00008354394,0.00005769356,0.0041199825],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99584264,0.00045525027,0.0020832915,0.00019719175,0.0012478988,0.00017371548],"domain_scores_gemma":[0.9932072,0.002609627,0.002635444,0.00031248812,0.0008529572,0.00038227264],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.001924113,0.00022134796,0.0013974503,0.00026157746,0.00001659313,0.000014440638,0.00013593525,0.0009951838,0.00007750201],"category_scores_gemma":[0.0078029064,0.0001560951,0.00054593926,0.00013257141,0.00020832065,0.00007726975,0.000019789599,0.0025753486,0.00009555035],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021461946,0.00012965253,0.002504812,0.00060174323,0.00026166285,0.00028367658,0.000042383163,0.000007798633,0.0018276098,0.000010235747,0.99275714,0.0013586502],"study_design_scores_gemma":[0.009945107,0.01073079,0.012629202,0.006517107,0.002445827,0.00012310766,0.000025927951,0.00013256882,0.060996756,0.004093575,0.89198166,0.0003783416],"about_ca_topic_score_codex":0.000007759798,"about_ca_topic_score_gemma":2.4585293e-7,"teacher_disagreement_score":0.6155777,"about_ca_system_score_codex":0.000094864045,"about_ca_system_score_gemma":0.0009295173,"threshold_uncertainty_score":0.99972576},"labels":[],"label_agreement":null},{"id":"W2173989824","doi":"10.1172/jci85002","title":"Memory or amnesia: the dilemma of stem cell therapy in muscular dystrophies","year":2015,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Induced pluripotent stem cell; Muscular dystrophy; Genetic enhancement; Duchenne muscular dystrophy; Bioinformatics; Biology; Stem cell; Gene delivery; Myocyte; Neuroscience; Medicine; Gene; Genetics; Cell biology; Embryonic stem cell","score_opus":0.1089269614849972,"score_gpt":0.36231449860263193,"score_spread":0.25338753711763473,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2173989824","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93037933,0.0019496634,0.000040807696,0.06649524,0.0006246376,0.00035488504,0.000013687165,0.0000023913155,0.00013933393],"genre_scores_gemma":[0.8326678,0.012830383,0.0012297379,0.12642352,0.019606128,0.000039121864,0.0002904938,0.00020052432,0.0067122667],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9953031,0.0014219157,0.0018856918,0.00027109246,0.0008729093,0.00024532026],"domain_scores_gemma":[0.99648154,0.00035481874,0.0017819111,0.00049599394,0.0007597706,0.00012595767],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0038051538,0.00022814523,0.0006933513,0.00015171123,0.000030084118,0.000031852647,0.00072835217,0.0010011009,0.000015038968],"category_scores_gemma":[0.00050090125,0.00013009882,0.00041585712,0.00018869655,0.00050090847,0.000012338752,0.00011299647,0.0018070994,0.0000057342545],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001211309,0.0001757258,0.0032963979,0.00032769836,0.0003231041,0.00043962683,0.00012637442,0.00036928526,0.044332463,0.0000017181427,0.94160837,0.0077879173],"study_design_scores_gemma":[0.0055677057,0.0056750462,0.009794275,0.00053173135,0.00015675607,0.00017105108,0.0002289614,0.00014121759,0.098044544,0.0005277995,0.8786071,0.00055382133],"about_ca_topic_score_codex":0.000024881509,"about_ca_topic_score_gemma":0.000012572293,"teacher_disagreement_score":0.097711526,"about_ca_system_score_codex":0.000029817724,"about_ca_system_score_gemma":0.0010387732,"threshold_uncertainty_score":0.7851048},"labels":[],"label_agreement":null},{"id":"W2177810905","doi":"10.1172/jci83178","title":"A collagen VI–dependent pathogenic mechanism for Hirschsprung’s disease","year":2015,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Congenital gastrointestinal and neural anomalies","field":"Medicine","cited_by":96,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Génome Québec; Université du Québec à Montréal; Natural Sciences and Engineering Research Council of Canada; McGill University","keywords":"Neural crest; Extracellular matrix; Fibronectin; Collagen VI; Hirschsprung's disease; Downregulation and upregulation; Enteric nervous system; Cell biology; Biology; Cell migration; Pathology; Cancer research; Immunology; Disease; Medicine; Cell; Gene; Endocrinology; Genetics","score_opus":0.16995113379342575,"score_gpt":0.38243286430072965,"score_spread":0.2124817305073039,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2177810905","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9887483,0.0001781892,0.0011629572,0.008722755,0.0007044262,0.00032510108,0.000012516684,0.000017658776,0.00012807062],"genre_scores_gemma":[0.98583096,0.000028545319,0.00901016,0.00223223,0.0012161952,0.000009621727,0.000008838907,0.00001557032,0.0016478603],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980138,0.00010635335,0.0011521062,0.00015177477,0.00042607627,0.00014990615],"domain_scores_gemma":[0.9966901,0.00030810572,0.0006413124,0.00012601251,0.001163174,0.0010712829],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012472898,0.000120300254,0.00043244605,0.000074406285,0.00003651739,0.000024212797,0.00009722381,0.00006777881,0.000015932652],"category_scores_gemma":[0.007590821,0.000085692205,0.0003596044,0.000096150005,0.0000998513,0.00016245485,0.000033624317,0.00017623148,0.000017392775],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.04233152,0.0029888544,0.63853437,0.0009854159,0.001236863,0.0032479172,0.0010194214,0.0001454245,0.16785415,0.030151477,0.043392904,0.06811169],"study_design_scores_gemma":[0.031450476,0.032152895,0.45954162,0.0017689298,0.0042478745,0.0036425635,0.0009702776,0.010389044,0.022539847,0.4223252,0.010016097,0.0009551764],"about_ca_topic_score_codex":0.0000025490444,"about_ca_topic_score_gemma":0.000004468142,"teacher_disagreement_score":0.3921737,"about_ca_system_score_codex":0.00004533525,"about_ca_system_score_gemma":0.0006547975,"threshold_uncertainty_score":0.90874696},"labels":[],"label_agreement":null},{"id":"W2256023856","doi":"10.1172/jci80937","title":"TGF-β/β2-spectrin/CTCF-regulated tumor suppression in human stem cell disorder Beckwith-Wiedemann syndrome","year":2016,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Genetic Syndromes and Imprinting","field":"Biochemistry, Genetics and Molecular Biology","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; National Institute on Alcohol Abuse and Alcoholism; University of Texas MD Anderson Cancer Center; Directorate for Biological Sciences; George Washington University; American Cancer Society; U.S. Department of Veterans Affairs; National Cancer Institute; National Institutes of Health","keywords":"Beckwith–Wiedemann syndrome; CTCF; Medicine; Spectrin; Biology; Cancer research; Immunology; Genetics; Cell; Gene; Transcription factor","score_opus":0.030103862795979115,"score_gpt":0.31492420656648573,"score_spread":0.28482034377050663,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2256023856","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99779713,0.00029782957,0.0004944323,0.0007080784,0.00039969553,0.00013827569,0.0000023790708,0.00000595656,0.0001562347],"genre_scores_gemma":[0.9978942,0.000110547975,0.0007061647,0.0001742131,0.00026118415,0.0000031321078,0.000006575483,0.000024926183,0.000819001],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9973204,0.00027960638,0.0015818044,0.00029478243,0.0002705047,0.00025287142],"domain_scores_gemma":[0.998262,0.000095971234,0.0009695957,0.00027962946,0.0001702006,0.0002226286],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013456189,0.0001709312,0.00040717554,0.000105909225,0.000059323123,0.000028196953,0.00026707212,0.0002209193,0.000049602502],"category_scores_gemma":[0.00030432522,0.00011520469,0.00022032417,0.00012646739,0.00014973868,0.000020558551,0.000101591904,0.00022896884,0.0000112850075],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042617106,0.00016495807,0.30598143,0.000030158286,0.000040016224,0.000026913618,0.000037879992,0.00009256763,0.68702996,0.00003522673,0.0009748054,0.0055434946],"study_design_scores_gemma":[0.0035131637,0.0016379397,0.8065271,0.00044059262,0.000044065077,0.00026787794,0.00008425464,0.00009894042,0.18208858,0.0011155838,0.003890447,0.00029149748],"about_ca_topic_score_codex":0.000010979666,"about_ca_topic_score_gemma":0.000012247864,"teacher_disagreement_score":0.50494134,"about_ca_system_score_codex":0.00002078797,"about_ca_system_score_gemma":0.00013760338,"threshold_uncertainty_score":0.46979108},"labels":[],"label_agreement":null},{"id":"W2303852857","doi":"10.1172/jci82771","title":"Alloantigen-specific regulatory T cells generated with a chimeric antigen receptor","year":2016,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"CAR-T cell therapy research","field":"Medicine","cited_by":476,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child and Family Research Institute","funders":"Canadian Cancer Society Research Institute; Canadian Institutes of Health Research; University of British Columbia; Canadian Blood Services","keywords":"Chimeric antigen receptor; Immunology; Antigen; Immunotherapy; Human leukocyte antigen; Transplantation; Immune system; Cell therapy; Adoptive cell transfer; Major histocompatibility complex; Biology; Graft-versus-host disease; T cell; Medicine; Stem cell; Cell biology","score_opus":0.10537970307624715,"score_gpt":0.3739260898684617,"score_spread":0.26854638679221454,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2303852857","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99284744,0.00037518085,0.0006197025,0.0048840526,0.00057371537,0.00026293486,0.0000027216552,0.000024715737,0.00040951863],"genre_scores_gemma":[0.967007,0.00438352,0.016164895,0.0013525645,0.003529114,0.000004751862,0.000008869924,0.00008024821,0.0074690436],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99676836,0.00039504576,0.0014354476,0.00025713033,0.0008796581,0.0002643848],"domain_scores_gemma":[0.99688405,0.0004530374,0.0008857495,0.0003622926,0.0008102794,0.0006046167],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0025313965,0.00016595436,0.0006377936,0.00020058262,0.000056392946,0.000030126574,0.00017223583,0.00019725402,0.0021230686],"category_scores_gemma":[0.00040802642,0.00009104595,0.00025407836,0.00038903893,0.00053264207,0.00023751611,0.000023419145,0.0004963729,0.00013775653],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014395284,0.00013994663,0.054305777,0.000013597953,0.00020322535,0.000049414957,0.000071014256,0.0000052159567,0.88236237,0.000040634743,0.01680805,0.044561204],"study_design_scores_gemma":[0.007075466,0.003472198,0.22855806,0.0007244016,0.00007985451,0.00020006375,0.000044065302,0.00006134022,0.5624907,0.00027753258,0.19676977,0.00024655854],"about_ca_topic_score_codex":0.0000032412113,"about_ca_topic_score_gemma":0.0000014860672,"teacher_disagreement_score":0.3198717,"about_ca_system_score_codex":0.00009273122,"about_ca_system_score_gemma":0.0006991338,"threshold_uncertainty_score":0.99878913},"labels":[],"label_agreement":null},{"id":"W2326151669","doi":"10.1172/jci80205","title":"Hedgehog inhibits β-catenin activity in synovial joint development and osteoarthritis","year":2016,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Hedgehog Signaling Pathway Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Hospital for Sick Children","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institutes of Health; Canadian Institutes of Health Research; Hospital for Sick Children","keywords":"Osteoarthritis; Hedgehog; Catenin; Knee Joint; Medicine; Biology; Chemistry; Cell biology; Bioinformatics; Wnt signaling pathway; Pathology; Signal transduction; Surgery; Alternative medicine","score_opus":0.08588918283437016,"score_gpt":0.3335680901519088,"score_spread":0.24767890731753864,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2326151669","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975934,0.00035003197,0.00062819966,0.0010528074,0.00025030933,0.00007229051,0.0000017928575,0.0000028889804,0.000048252954],"genre_scores_gemma":[0.99720705,0.00019400739,0.001959238,0.00017542276,0.00039068935,0.0000030217934,0.0000013334104,0.000009137242,0.00006011284],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99848264,0.00019585334,0.0008552348,0.00017734108,0.00015657597,0.00013236838],"domain_scores_gemma":[0.99906826,0.00010465836,0.0004475738,0.000079925536,0.00015875312,0.00014084546],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015810755,0.000100977966,0.00028146332,0.00006441742,0.000036335277,0.000012404242,0.00006520525,0.00015490572,0.000002150308],"category_scores_gemma":[0.0021561394,0.00007023976,0.00007050646,0.000059210375,0.00020474201,0.000011863633,0.000071698174,0.0001449335,0.0000037103298],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000123509,0.000053096144,0.05686451,0.00001587417,0.00003185841,0.0000116977735,0.00011588013,0.0000038386775,0.7791157,0.000018028313,0.00014628487,0.16349976],"study_design_scores_gemma":[0.0018471158,0.00063306006,0.19543493,0.00027913245,0.000009177013,0.000027434284,0.000022779152,0.000004953396,0.7990354,0.00028598582,0.0023063794,0.0001136602],"about_ca_topic_score_codex":0.0000019466659,"about_ca_topic_score_gemma":0.000050473584,"teacher_disagreement_score":0.16338609,"about_ca_system_score_codex":0.000018868115,"about_ca_system_score_gemma":0.00022415866,"threshold_uncertainty_score":0.28642944},"labels":[],"label_agreement":null},{"id":"W2414532145","doi":"10.1172/jci85830","title":"Angiopoietin receptor TEK mutations underlie primary congenital glaucoma with variable expressivity","year":2016,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Glaucoma and retinal disorders","field":"Medicine","cited_by":289,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Eye Institute; Japan Society for the Promotion of Science; National Health and Medical Research Council; Medical Research Council; Robert H. Lurie Comprehensive Cancer Center; National Heart, Lung, and Blood Institute; Northwestern University; University of Wisconsin-Madison; Mallinckrodt Pharmaceuticals; Research to Prevent Blindness; National Institutes of Health; National Cancer Institute; National University of Singapore; March of Dimes Foundation","keywords":"Trabecular meshwork; Biology; Glaucoma; Phenotype; Haploinsufficiency; Schlemm's canal; Loss function; Genetics; Gene; Cell biology; Neuroscience","score_opus":0.03709722069796974,"score_gpt":0.3168550079633498,"score_spread":0.2797577872653801,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414532145","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9830561,0.00011187244,0.005252412,0.009209526,0.00035172724,0.00019379867,0.00000648078,0.0000236162,0.0017944227],"genre_scores_gemma":[0.9672368,0.000071795745,0.029934179,0.0011622516,0.0005297614,0.0000047048566,0.000016165384,0.000024007113,0.0010203],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99787754,0.00023030609,0.0010736488,0.00017284085,0.00046413785,0.00018154035],"domain_scores_gemma":[0.99713284,0.00091573485,0.0008320217,0.0001741418,0.0005401369,0.0004051301],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010287918,0.0001362155,0.00046420883,0.000096375574,0.00007231466,0.000021667065,0.00010336403,0.00016624691,0.00019076184],"category_scores_gemma":[0.0017785833,0.00007324835,0.00019359568,0.00019657816,0.0005171256,0.00032320747,0.000020186417,0.00034163208,0.000042603013],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013307787,0.00042524596,0.93349123,0.00006896074,0.0002807148,0.000058472415,0.00012123095,0.0000012665201,0.046085145,0.0008113552,0.009988965,0.007336642],"study_design_scores_gemma":[0.005731541,0.0024142293,0.97500056,0.00071657443,0.00034362447,0.0002874019,0.0001528164,0.000029863708,0.0025024647,0.0052625504,0.0073862113,0.00017217277],"about_ca_topic_score_codex":0.0000069980174,"about_ca_topic_score_gemma":0.0000036700958,"teacher_disagreement_score":0.04358268,"about_ca_system_score_codex":0.000056095163,"about_ca_system_score_gemma":0.0006910561,"threshold_uncertainty_score":0.29869813},"labels":[],"label_agreement":null},{"id":"W2416666529","doi":"10.1172/jci83005","title":"Metabolic regulation of immune responses: therapeutic opportunities","year":2016,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":97,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"Trinity College Dublin; Science Foundation Ireland","keywords":"Immune system; Biology; Cell metabolism; Metabolic pathway; Cell biology; Signal transduction; Immunity; Metabolism; Cellular metabolism; Cell; Metabolic control analysis; T cell; Immunology; Biochemistry; Biotechnology","score_opus":0.26778424335156414,"score_gpt":0.42244207998477895,"score_spread":0.1546578366332148,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416666529","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0003106346,0.9902763,0.00020107544,0.00020670173,0.008381237,0.00021402733,0.000007917101,0.000013975648,0.00038813878],"genre_scores_gemma":[0.0007287186,0.9871493,0.00006223658,0.00010121603,0.00032798696,0.000005722198,0.000074663796,0.000030138925,0.011520023],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99192095,0.002811112,0.004828813,0.00017387897,0.00010951254,0.0001557214],"domain_scores_gemma":[0.9892066,0.002184898,0.0076225945,0.00032936793,0.00061233825,0.000044200548],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.003830627,0.00026602735,0.0022916554,0.0004928973,0.00006779543,0.000015571704,0.0002852024,0.00080344523,0.0010263729],"category_scores_gemma":[0.0019308898,0.00016713611,0.0014023139,0.00016004605,0.0004695241,0.00035166746,0.00003806392,0.00086849707,0.0001913545],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000295931,0.00007960095,0.000017251503,0.0006335872,0.0009902512,0.0000014016605,0.000047218724,2.0251602e-7,0.0022733987,0.0017431573,0.003352239,0.9905658],"study_design_scores_gemma":[0.00067964446,0.000431363,0.00044482108,0.0076790014,0.0010779297,0.00018124295,0.00004728448,4.5184083e-7,0.0012594899,0.0006462386,0.9873974,0.00015513255],"about_ca_topic_score_codex":0.0000049870882,"about_ca_topic_score_gemma":2.6361067e-7,"teacher_disagreement_score":0.9904106,"about_ca_system_score_codex":0.00004047459,"about_ca_system_score_gemma":0.0008411111,"threshold_uncertainty_score":0.9998868},"labels":[],"label_agreement":null},{"id":"W2461967278","doi":"10.1172/jci84767","title":"Truncated netrin-1 contributes to pathological vascular permeability in diabetic retinopathy","year":2016,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Axon Guidance and Neuronal Signaling","field":"Neuroscience","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal; Polytechnique Montréal; McGill University; Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"Alcon Research Institute; Canadian Institutes of Health Research; Université de Montréal; Killam Trusts; Multiple Sclerosis Society; Fonds de Recherche du Québec - Santé; Multiple Sclerosis Society of Canada; Canadian Diabetes Association; Natural Sciences and Engineering Research Council of Canada; Foundation Fighting Blindness","keywords":"Vascular permeability; Diabetic retinopathy; Netrin; Retinal; Retina; Medicine; Angiogenesis; Retinopathy; Diabetes mellitus; Ophthalmology; Pathology; Internal medicine; Biology; Endocrinology; Receptor; Neuroscience; Axon guidance","score_opus":0.12461586084798476,"score_gpt":0.3664707907720131,"score_spread":0.24185492992402835,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2461967278","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9912153,0.00004807923,0.0014291549,0.006542436,0.0005113949,0.0001890063,0.000003000545,0.00001720185,0.000044425822],"genre_scores_gemma":[0.9951462,0.00009553544,0.00031999845,0.0041899714,0.0002117979,0.0000048681845,2.1952121e-7,0.000009220247,0.000022202581],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99589324,0.0012437463,0.0018218744,0.00033762786,0.00044567737,0.0002578279],"domain_scores_gemma":[0.99533117,0.0033611173,0.0006187499,0.00019625326,0.0001970355,0.0002956697],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0043231277,0.00012717843,0.0005050481,0.0001460033,0.00004999501,0.000028773811,0.00030455462,0.0001581251,0.000038950337],"category_scores_gemma":[0.050317362,0.000076374075,0.00022171196,0.00047182597,0.00031868892,0.00025861437,0.000060345745,0.00040830564,0.00004794177],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024030349,0.00015230042,0.35121307,0.000007255182,0.0000038568974,0.000080337755,0.000044954744,0.0000628392,0.63586533,0.00067551166,0.00016410131,0.011490119],"study_design_scores_gemma":[0.001798151,0.0008478093,0.7519487,0.0002442896,0.000018157756,0.000015749574,0.000008241835,0.00015695138,0.22608687,0.017827425,0.00091422506,0.00013340924],"about_ca_topic_score_codex":0.0000017916182,"about_ca_topic_score_gemma":0.0000015751968,"teacher_disagreement_score":0.40977848,"about_ca_system_score_codex":0.00006558143,"about_ca_system_score_gemma":0.00014199782,"threshold_uncertainty_score":0.9576822},"labels":[],"label_agreement":null},{"id":"W2478556254","doi":"10.1172/jci85939","title":"Local TNF causes NFATc1-dependent cholesterol-mediated podocyte injury","year":2016,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Renal Diseases and Glomerulopathies","field":"Medicine","cited_by":193,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Center for Advancing Translational Sciences; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; Leonard M. Miller School of Medicine; Institute of Genetics; National Institutes of Health; Waldemar von Frenckells Stiftelse; Novo Nordisk Fonden; Svenska Kulturfonden; Deutsche Forschungsgemeinschaft; American Heart Association; Halpin Foundation; University of Miami; Folkhälsanin Tutkimussäätiö; Wilhelm och Else Stockmanns Stiftelse; Nephcure Foundation; Samfundet Folkhälsan; F. Hoffmann-La Roche; University of Michigan; Novo Nordisk","keywords":"Podocyte; ABCA1; Albuminuria; Cholesterol; Endocrinology; Internal medicine; Medicine; Tumor necrosis factor alpha; Glomerulosclerosis; Kidney; Chemistry; Biochemistry; Transporter; Proteinuria","score_opus":0.058585559979733956,"score_gpt":0.3724486632723426,"score_spread":0.31386310329260864,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2478556254","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9886452,0.00049441244,0.0012103838,0.00860848,0.00076170097,0.00012372309,0.000021557416,0.000025702295,0.000108833985],"genre_scores_gemma":[0.9937619,0.0013894652,0.00029369473,0.0030808563,0.0010793227,0.0000022672364,0.000007075224,0.000020235484,0.00036517694],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9970089,0.00023725965,0.0017112445,0.00018527766,0.00065835187,0.00019896695],"domain_scores_gemma":[0.9969947,0.00057828525,0.0009642149,0.00021607945,0.00050593464,0.0007408272],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010754432,0.00015352374,0.00061448454,0.00015343264,0.00004014359,0.000027155374,0.00011614492,0.00019348784,0.00011705141],"category_scores_gemma":[0.0034916638,0.00008535067,0.00034456543,0.0001516546,0.00043062083,0.0003642266,0.000036362133,0.00037941028,0.00013343709],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0031107406,0.0007244543,0.78591424,0.00019698503,0.00047189038,0.00040059155,0.00012544509,0.000015432339,0.021634085,0.00033026005,0.018371616,0.16870424],"study_design_scores_gemma":[0.004193099,0.0028341522,0.9734593,0.0012006835,0.0003706017,0.0001850119,0.00006697932,0.000057978083,0.00861813,0.0026822772,0.0061654127,0.00016638912],"about_ca_topic_score_codex":0.00000884305,"about_ca_topic_score_gemma":0.0000042200973,"teacher_disagreement_score":0.18754503,"about_ca_system_score_codex":0.00006563246,"about_ca_system_score_gemma":0.00043335583,"threshold_uncertainty_score":0.41801},"labels":[],"label_agreement":null},{"id":"W2493933098","doi":"10.1172/jci61608","title":"A tribute to Ralph M. Steinman","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Tribute; Art; Art history","score_opus":0.12914888872555097,"score_gpt":0.35347334292773963,"score_spread":0.22432445420218866,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2493933098","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9817496,0.00018257818,0.0016326997,0.0027918569,0.01113129,0.00010768863,7.763759e-7,0.000021280073,0.00238225],"genre_scores_gemma":[0.98285466,0.00004048376,0.0010925436,0.0024332083,0.0002312538,0.0000019334846,0.00000913125,0.000009012643,0.013327742],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99823153,0.00033329302,0.0011722614,0.00009970988,0.00004329415,0.00011994065],"domain_scores_gemma":[0.9986643,0.0001734602,0.0006684938,0.00012317419,0.000302756,0.00006778621],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0013335448,0.00007917491,0.0002824898,0.00012495171,0.000054434993,0.000009055211,0.00013600414,0.00018041879,0.0012246941],"category_scores_gemma":[0.0013342304,0.000062008345,0.0001947074,0.00011528093,0.000090862995,0.00024617216,0.00002276786,0.0004650133,0.00096488686],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025781477,0.00044786197,0.034459647,0.000013020511,0.0004108291,0.00001323362,0.0016987564,0.0000064893666,0.25804603,0.0014482562,0.6698875,0.030990273],"study_design_scores_gemma":[0.002517501,0.0029483424,0.15042603,0.00011361703,0.000110595225,0.00016960525,0.00029833135,0.0000053633935,0.22931352,0.0023798654,0.61154336,0.00017387095],"about_ca_topic_score_codex":0.000018537565,"about_ca_topic_score_gemma":0.0000042129996,"teacher_disagreement_score":0.11596639,"about_ca_system_score_codex":0.000020199777,"about_ca_system_score_gemma":0.000082114915,"threshold_uncertainty_score":0.99981296},"labels":[],"label_agreement":null},{"id":"W2497649390","doi":"10.1172/jci80711","title":"BRPF1 is essential for development of fetal hematopoietic stem cells","year":2016,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; National Research Council Canada; McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Bromodomain; Biology; Stem cell; Epigenetics; Cell biology; Chromatin; Haematopoiesis; Hematopoietic stem cell; Bone marrow; Cancer research; Immunology; Genetics; Gene","score_opus":0.06766940587715499,"score_gpt":0.36472062741531364,"score_spread":0.29705122153815866,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2497649390","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92265064,0.0002358772,0.07625181,0.00034527454,0.00039653934,0.000090425856,0.000005235547,0.0000011903445,0.000023011422],"genre_scores_gemma":[0.980869,0.0001422676,0.018293777,0.00008520493,0.00041656388,0.0000021690828,0.0000037962025,0.000008692935,0.00017852044],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99834025,0.00007503065,0.0011861296,0.00012684624,0.00017962753,0.00009210476],"domain_scores_gemma":[0.9983632,0.00012077703,0.0009174631,0.00011713934,0.00037084185,0.00011058859],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011678608,0.00007651525,0.00022121076,0.000035052457,0.000029500461,0.000007819368,0.00011054105,0.0001529405,0.0000090638405],"category_scores_gemma":[0.00020846642,0.000052364932,0.00018571406,0.00003627942,0.00009683252,0.000007383552,0.000027131273,0.000050018178,0.0000024042697],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010186681,0.000051824594,0.0038374139,0.0000306573,0.000060560622,2.600966e-7,0.000077338744,0.00000993108,0.9616175,0.000069720176,0.00043377298,0.033709098],"study_design_scores_gemma":[0.00095955003,0.0003852261,0.002146675,0.0000668384,0.000030451209,0.0000013999115,0.000015836167,0.000028012075,0.98489594,0.0017742326,0.009622499,0.00007334452],"about_ca_topic_score_codex":3.3661465e-7,"about_ca_topic_score_gemma":0.0000016753081,"teacher_disagreement_score":0.058218375,"about_ca_system_score_codex":0.0000074670966,"about_ca_system_score_gemma":0.00027271305,"threshold_uncertainty_score":0.21353799},"labels":[],"label_agreement":null},{"id":"W2508616096","doi":"10.1172/jci86437","title":"BET bromodomain inhibition enhances T cell persistence and function in adoptive immunotherapy models","year":2016,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"CAR-T cell therapy research","field":"Medicine","cited_by":215,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium; University of Toronto; Princess Margaret Cancer Centre; University Health Network","funders":"National Cancer Institute; European Federation of Pharmaceutical Industries and Associations; University of Toronto; Ministero dello Sviluppo Economico; Genome Canada; Fundação de Amparo à Pesquisa do Estado de São Paulo; Ontario Ministry of Economic Development and Innovation; Novartis Pharma; Ontario Genomics Institute; Wellcome Trust; Pfizer; Princess Margaret Cancer Foundation; National Institutes of Health; Ontario Genomics","keywords":"Adoptive immunotherapy; Immunotherapy; Bromodomain; Persistence (discontinuity); Adoptive cell transfer; Function (biology); Cancer research; Immunology; Biology; T cell; Computational biology; Immune system; Cell biology; Epigenetics; Genetics","score_opus":0.12780423115335657,"score_gpt":0.3737692853268149,"score_spread":0.24596505417345835,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2508616096","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99110186,0.00043662972,0.004297529,0.0032110324,0.00016606586,0.00019307631,0.0000015875955,0.000007116275,0.00058510795],"genre_scores_gemma":[0.9943363,0.0022985574,0.0018614732,0.00049843924,0.0003468935,0.0000038092658,0.0000018896937,0.000013302017,0.0006393323],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99792564,0.00034456473,0.0009802633,0.00017270955,0.00043151123,0.00014532618],"domain_scores_gemma":[0.99820596,0.00068127445,0.0005006778,0.00012001722,0.00030427272,0.00018779999],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026726592,0.000098508244,0.00038664378,0.00018655177,0.000032139542,0.000019398809,0.000050224786,0.00015723138,0.00015699575],"category_scores_gemma":[0.00041941353,0.00006421496,0.00014639563,0.00017405442,0.00031371063,0.0005238177,0.000015110242,0.000373927,0.0000058395335],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0031802016,0.00020850934,0.031414088,0.00004201181,0.000057867608,0.000024566281,0.000532445,0.00002699497,0.8835962,0.00020046646,0.0002197649,0.0804969],"study_design_scores_gemma":[0.03136184,0.013968758,0.44802213,0.0034092169,0.00020173647,0.00026738716,0.0011939212,0.0036417386,0.38361287,0.11145806,0.0023691864,0.0004931661],"about_ca_topic_score_codex":0.000009631982,"about_ca_topic_score_gemma":0.000007826032,"teacher_disagreement_score":0.4999833,"about_ca_system_score_codex":0.00009735835,"about_ca_system_score_gemma":0.00022593164,"threshold_uncertainty_score":0.261861},"labels":[],"label_agreement":null},{"id":"W2509793709","doi":"10.1172/jci88546","title":"Aging promotes acquisition of naive-like CD8+ memory T cell traits and enhanced functionalities","year":2016,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Nutrition, Metabolism and Diabetes","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Allergy and Infectious Diseases; U.S. National Library of Medicine; National Institute on Aging; National Institutes of Health; American Heart Association","keywords":"Biology; CD8; Memory T cell; Memory cell; Cytotoxic T cell; Immune system; Phenotype; Immunological memory; T cell; Neuroscience; Immunology; Genetics; Immunity; In vitro; Gene","score_opus":0.038261960291860464,"score_gpt":0.2903780032412614,"score_spread":0.25211604294940093,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2509793709","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949052,0.0015749468,0.000788192,0.0013246277,0.0010401156,0.000088423425,0.000007720286,0.00001345652,0.00025735548],"genre_scores_gemma":[0.99674773,0.0003274413,0.0004079249,0.00028128596,0.00017745123,0.0000021075912,0.0000065241798,0.000009018529,0.0020404921],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979173,0.00047793926,0.0012122244,0.0001645714,0.00006762517,0.00016031828],"domain_scores_gemma":[0.9974101,0.001008303,0.001135993,0.00008320147,0.00031793118,0.00004445187],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001129796,0.00012300452,0.00043988493,0.00011561516,0.00007735069,0.000007637697,0.00011826509,0.00029564693,0.0002477105],"category_scores_gemma":[0.00040654364,0.00008015036,0.00015229608,0.00006918356,0.0007905758,0.00027605647,0.00003684339,0.0002911133,0.000033951474],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021309487,0.000105062056,0.0021786632,0.000034627283,0.00010493791,0.000001580955,0.00025990693,0.0000013341332,0.9864134,0.00033987744,0.00070851616,0.009638962],"study_design_scores_gemma":[0.0029258465,0.000950603,0.024722332,0.00024180442,0.000093852745,0.00007004512,0.00020918736,0.0000014077448,0.9629893,0.006232192,0.0014479561,0.00011548958],"about_ca_topic_score_codex":0.0000064226656,"about_ca_topic_score_gemma":0.0000019931979,"teacher_disagreement_score":0.023424152,"about_ca_system_score_codex":0.000016681743,"about_ca_system_score_gemma":0.00014184366,"threshold_uncertainty_score":0.32684368},"labels":[],"label_agreement":null},{"id":"W2515394053","doi":"10.1172/jci85946","title":"A liver stress-endocrine nexus promotes metabolic integrity during dietary protein dilution","year":2016,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Fibroblast Growth Factor Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":169,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Deutsches Krebsforschungszentrum; Deutsche Forschungsgemeinschaft; European Foundation for the Study of Diabetes; Eli Lilly and Company","keywords":"FGF21; Endocrinology; Internal medicine; Biology; Glucose homeostasis; Metabolic syndrome; Impaired glucose tolerance; Homeostasis; Fatty liver; Insulin resistance; Obesity; Medicine; Fibroblast growth factor; Disease","score_opus":0.07441223140621776,"score_gpt":0.3685980144045031,"score_spread":0.29418578299828535,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2515394053","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970927,0.00040401603,0.0004903474,0.001585724,0.00015593406,0.00020811895,0.000012518442,0.000007703273,0.00004292991],"genre_scores_gemma":[0.99672425,0.00022155432,0.0016921527,0.000039453058,0.0010324579,0.0000071988616,0.000009493346,0.000016960541,0.000256497],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978227,0.0004431803,0.00092662557,0.00022737471,0.00035794213,0.00022217789],"domain_scores_gemma":[0.998441,0.00009130855,0.0005661978,0.00022524766,0.00041825988,0.0002580124],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009918103,0.00013390213,0.00028523974,0.00008168189,0.00005432647,0.000026828826,0.00023107576,0.00017193037,0.000034786608],"category_scores_gemma":[0.0043978305,0.00008425064,0.00022042176,0.000102052734,0.00027378087,0.000045163088,0.00011946218,0.00041989388,0.00001476841],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035905698,0.000108522196,0.05034746,0.00004827394,0.000089361936,0.000015929956,0.00001637584,0.0000037007653,0.943453,0.00010754412,0.00017606291,0.005274695],"study_design_scores_gemma":[0.0010778662,0.0007385173,0.3059999,0.00024883216,0.000023384118,0.000038064776,0.000011515454,0.000036847287,0.68987817,0.0012031486,0.0006356597,0.00010807883],"about_ca_topic_score_codex":0.000015086886,"about_ca_topic_score_gemma":0.00001722888,"teacher_disagreement_score":0.25565246,"about_ca_system_score_codex":0.000019494288,"about_ca_system_score_gemma":0.0002265273,"threshold_uncertainty_score":0.52649313},"labels":[],"label_agreement":null},{"id":"W2532476342","doi":"10.1172/jci87968","title":"Transcription factor ETV1 is essential for rapid conduction in the heart","year":2016,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Congenital heart defects research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":90,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Center for Advancing Translational Sciences; U.S. National Library of Medicine; National Center for Research Resources; National Institute of General Medical Sciences; National Human Genome Research Institute; National Heart, Lung, and Blood Institute; National Cancer Institute; National Institutes of Health; School of Medicine, New York University; York University; Vanderbilt University","keywords":"Transcription factor; Electrical conduction system of the heart; Internal medicine; Heart failure; Biology; Regulator; Right bundle branch block; Cardiology; Medicine; Cell biology; Gene; Electrocardiography; Genetics","score_opus":0.13247772127998275,"score_gpt":0.42758823356431525,"score_spread":0.2951105122843325,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2532476342","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9888654,0.00016328982,0.0018532535,0.008482697,0.00038837935,0.00021274626,0.000010113548,0.0000014808944,0.000022670127],"genre_scores_gemma":[0.9975881,0.00016313542,0.00039563968,0.0007710824,0.0009357925,0.000007031246,0.000005607769,0.000007301849,0.0001262924],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99861294,0.00031983873,0.00061033684,0.00012662364,0.00021352971,0.00011672521],"domain_scores_gemma":[0.99915344,0.00023639825,0.00017462512,0.00012411077,0.00023532973,0.00007612936],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016087577,0.00006275024,0.0001471168,0.000050115603,0.000034241883,0.000021021375,0.0001157556,0.00014556339,0.000032979882],"category_scores_gemma":[0.0012323739,0.0000353161,0.00021031045,0.00006953991,0.00013510307,0.000021447753,0.000009356721,0.00014461754,0.0000051949055],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029797648,0.000053708194,0.006173462,0.000012803971,0.000022105078,7.417947e-7,0.000076711396,9.235037e-7,0.9640646,0.000034264678,0.0049751634,0.024287548],"study_design_scores_gemma":[0.004067689,0.0033322796,0.12846658,0.000098508455,0.00004249595,0.00007888051,0.00011308761,0.0000949253,0.75199264,0.003610277,0.10792527,0.00017736977],"about_ca_topic_score_codex":0.0000031478323,"about_ca_topic_score_gemma":0.000016114695,"teacher_disagreement_score":0.21207196,"about_ca_system_score_codex":0.000010556254,"about_ca_system_score_gemma":0.00015332235,"threshold_uncertainty_score":0.14753558},"labels":[],"label_agreement":null},{"id":"W2541977924","doi":"10.1172/jci87802","title":"Reciprocal stabilization of ABL and TAZ regulates osteoblastogenesis through transcription factor RUNX2","year":2016,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Hippo pathway signaling and YAP/TAZ","field":"Biochemistry, Genetics and Molecular Biology","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; Hospital for Sick Children; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; Princess Margaret Cancer Centre; University of Toronto; University Health Network","funders":"National Center for Advancing Translational Sciences; National Institute of Neurological Disorders and Stroke; National Institute of General Medical Sciences; National Institute of Mental Health; Japan Society for the Promotion of Science; Canadian Institutes of Health Research; National Cancer Institute; National Institutes of Health; Ontario Institute for Cancer Research; University Health Network","keywords":"RUNX2; Transcription factor; Biology; Cell biology; Adipogenesis; Coactivator; Tyrosine kinase; Genetics; Signal transduction; Mesenchymal stem cell; Gene","score_opus":0.07040951941508372,"score_gpt":0.335123610860241,"score_spread":0.2647140914451573,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2541977924","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99054444,0.0003702323,0.0081131635,0.00059786014,0.000249697,0.00008168766,0.0000142471345,0.0000044002245,0.00002429994],"genre_scores_gemma":[0.9959187,0.0006536101,0.0028108445,0.000120150544,0.0003870782,0.0000014249251,0.0000095621745,0.000013249013,0.000085365326],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982507,0.0002410069,0.0010278814,0.00017634041,0.00019978828,0.00010424079],"domain_scores_gemma":[0.9985557,0.00013167309,0.00070106646,0.00013345058,0.0003590729,0.00011903602],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008237802,0.00010487707,0.00027290388,0.00003958899,0.00003597612,0.000010894092,0.00008789389,0.00024161507,0.000015884872],"category_scores_gemma":[0.0012010848,0.00007036542,0.00014787936,0.00007316381,0.00024933033,0.000030616713,0.000014785144,0.000085616244,0.0000012864584],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021566938,0.00003978093,0.02039325,0.000025201245,0.000039402898,5.355687e-7,0.00011731246,0.000029194513,0.9672036,0.000054735592,0.00004614086,0.011835176],"study_design_scores_gemma":[0.0011332551,0.0012957744,0.033851143,0.00018065126,0.000050619492,0.000012574565,0.00004821062,0.000046117024,0.95925033,0.001998131,0.002022752,0.00011043405],"about_ca_topic_score_codex":0.0000049883524,"about_ca_topic_score_gemma":0.000006687054,"teacher_disagreement_score":0.013457894,"about_ca_system_score_codex":0.000009513954,"about_ca_system_score_gemma":0.00013657045,"threshold_uncertainty_score":0.2869419},"labels":[],"label_agreement":null},{"id":"W2550907688","doi":"10.1172/jci89031","title":"Early pregnancy vitamin D status and risk of preeclampsia","year":2016,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Vitamin D Research Studies","field":"Medicine","cited_by":208,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Institute of General Medical Sciences; Fondation du cancer du sein du Québec; National Heart, Lung, and Blood Institute; Genome Canada","keywords":"Preeclampsia; Medicine; Vitamin D and neurology; Pregnancy; Incidence (geometry); Obstetrics; vitamin D deficiency; Vitamin; Internal medicine; Endocrinology; Biology","score_opus":0.07755594017155584,"score_gpt":0.3953379316662747,"score_spread":0.31778199149471886,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2550907688","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99682206,0.000934757,0.00024376767,0.0014994995,0.00014874426,0.00015980678,0.0000065872337,0.0000058916985,0.00017886692],"genre_scores_gemma":[0.9878815,0.007756696,0.0036908695,0.000034904344,0.00023588413,0.0000020633856,4.0755106e-7,0.000009663262,0.00038802222],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99771523,0.0003094259,0.0011958039,0.0001216571,0.0004919554,0.00016591501],"domain_scores_gemma":[0.9963773,0.0014757502,0.0010471718,0.00015856729,0.0005765481,0.0003646658],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0016441809,0.0000856793,0.0004977321,0.00011120316,0.000032284348,0.000007682866,0.00006548924,0.00010856769,0.000016951939],"category_scores_gemma":[0.015300455,0.000045634493,0.00014559299,0.00011325564,0.0006627308,0.00022567183,0.00004973943,0.00033056783,0.000004491317],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001278136,0.000079852995,0.94468784,0.00007772945,0.00022027714,0.000012930712,0.00020555951,2.6244305e-7,0.0037125477,0.000096237265,0.0005045032,0.05027442],"study_design_scores_gemma":[0.0031368514,0.0022331574,0.98532045,0.0018566754,0.00019626334,0.000015585718,0.000045453973,0.000012057638,0.003292289,0.0036140915,0.00022857967,0.000048537568],"about_ca_topic_score_codex":0.0000141618675,"about_ca_topic_score_gemma":0.000004355588,"teacher_disagreement_score":0.050225884,"about_ca_system_score_codex":0.000026155767,"about_ca_system_score_gemma":0.00023709808,"threshold_uncertainty_score":0.99299407},"labels":[],"label_agreement":null},{"id":"W2552513321","doi":"10.1172/jci88590","title":"MHC class I–associated peptides derive from selective regions of the human genome","year":2016,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"vaccines and immunoinformatics approaches","field":"Biochemistry, Genetics and Molecular Biology","cited_by":207,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Maisonneuve-Rosemont; Université de Montréal; Institute for Research in Immunology and Cancer","funders":"Université de Montréal; Canada Research Chairs; Fondation du cancer du sein du Québec; Genome Canada","keywords":"Biology; Repertoire; Proteogenomics; Gene; Immunosurveillance; Major histocompatibility complex; Computational biology; Genome; CD8; Genetics; MHC class I; Human leukocyte antigen; Immune system; Genomics; Antigen","score_opus":0.05978519610139422,"score_gpt":0.3199656285088938,"score_spread":0.2601804324074996,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2552513321","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99783766,0.00009511035,0.0004153088,0.0011807084,0.00013451264,0.00007219574,0.0000132114765,0.0000017727743,0.00024953453],"genre_scores_gemma":[0.9986756,0.00011700533,0.00045735014,0.00025800866,0.00026714447,0.0000012198132,0.000012874728,0.000007936035,0.00020287035],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985635,0.00017199792,0.00094652653,0.00008380003,0.00014465717,0.00008946874],"domain_scores_gemma":[0.997887,0.00011428326,0.0013921839,0.00018348146,0.0003581538,0.00006489505],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000621034,0.000079663754,0.00022598157,0.000022235514,0.00006369378,0.00001065131,0.00022755827,0.00016026432,0.0000056418467],"category_scores_gemma":[0.0016473496,0.00004229377,0.00024070841,0.00007570327,0.00017116095,0.000015406025,0.00006317003,0.00014620456,0.0000014755967],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005076575,0.00007798531,0.06636506,0.000005180109,0.00028657803,2.61364e-7,0.0001594377,0.000027049806,0.92913043,0.00029671573,0.0031352344,0.00046529245],"study_design_scores_gemma":[0.0014198959,0.00061569485,0.8137796,0.00013358431,0.00010230263,0.0000059262084,0.00015216909,0.000042450538,0.1716528,0.010020461,0.0019606932,0.00011445022],"about_ca_topic_score_codex":0.0000122809815,"about_ca_topic_score_gemma":0.000022429416,"teacher_disagreement_score":0.75747764,"about_ca_system_score_codex":0.00001682369,"about_ca_system_score_gemma":0.0001529812,"threshold_uncertainty_score":0.19721502},"labels":[],"label_agreement":null},{"id":"W2559853954","doi":"10.1172/jci88016","title":"LIM domain–binding 1 maintains the terminally differentiated state of pancreatic β cells","year":2016,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":69,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Nutrition, Metabolism and Diabetes","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; Skaggs School of Pharmacy and Pharmaceutical Sciences; National Institute of Diabetes and Digestive and Kidney Diseases; University of Chicago Medicine; National Institute of Child Health and Human Development; University of California, San Diego; National Institute of General Medical Sciences; School of Medicine, Vanderbilt University; National Institutes of Health; Vanderbilt University; University of Pennsylvania; Children's Hospital of Philadelphia; Vanderbilt University Medical Center; University of Chicago","keywords":"PDX1; Cell biology; Homeobox; FOXA2; Biology; Enhancer; Cellular differentiation; Enteroendocrine cell; Progenitor cell; Transcription factor; PAX4; Cell fate determination; Chromatin; Islet; Stem cell; Endocrinology; Insulin; Genetics; Gene; Endocrine system","score_opus":0.05705633134224672,"score_gpt":0.3392721503811061,"score_spread":0.2822158190388594,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2559853954","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939484,0.00003969401,0.0014243895,0.003590488,0.0005171048,0.00014047233,0.000005349823,0.000009908974,0.00032418966],"genre_scores_gemma":[0.9961224,0.00016996176,0.0018917135,0.00065344345,0.00032873056,0.0000017020676,0.0000022586764,0.000010177156,0.0008196201],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99748504,0.00032101266,0.0015478109,0.00010652655,0.00038908471,0.00015050464],"domain_scores_gemma":[0.9960592,0.0018159675,0.0013538537,0.000197456,0.00032175693,0.0002518124],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019010084,0.00010834683,0.00055522996,0.000106268795,0.000042935742,0.000013877999,0.000110107045,0.00007750868,0.00012807416],"category_scores_gemma":[0.0025359127,0.00004917844,0.0002679195,0.00014540394,0.00034183825,0.00012524436,0.000021433287,0.00023651018,0.000025598287],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000880497,0.0002903413,0.4557586,0.00011601027,0.0004425328,0.000035406963,0.0003426567,0.0000061034602,0.5129784,0.00034172757,0.0033976666,0.025410095],"study_design_scores_gemma":[0.0060274694,0.0022356512,0.85657245,0.0018864906,0.0007352913,0.00006957155,0.00020625065,0.0001800193,0.11573331,0.014604391,0.0016042361,0.00014486337],"about_ca_topic_score_codex":0.0000028812708,"about_ca_topic_score_gemma":9.8315e-7,"teacher_disagreement_score":0.40081385,"about_ca_system_score_codex":0.000038639995,"about_ca_system_score_gemma":0.00024041625,"threshold_uncertainty_score":0.30359074},"labels":[],"label_agreement":null},{"id":"W2559992365","doi":"10.1172/jci90837","title":"Prolonged red cell storage before transfusion increases extravascular hemolysis","year":2016,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Blood transfusion and management","field":"Medicine","cited_by":200,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Columbia College","funders":"National Center for Advancing Translational Sciences; National Heart, Lung, and Blood Institute; Center for Clinical and Translational Research; National Institutes of Health","keywords":"Hemolysis; Medicine; Red Cell; Blood preservation; Blood transfusion; Red blood cell; Red Blood Cell Transfusion; Randomized controlled trial; Surgery; Internal medicine; Physiology","score_opus":0.041213776473162135,"score_gpt":0.3219256773531436,"score_spread":0.28071190087998144,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2559992365","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97880673,0.00015309619,0.004088742,0.015857743,0.00029770055,0.0003476713,0.0000018756081,0.000028441693,0.0004179944],"genre_scores_gemma":[0.99326634,0.00086369884,0.0033017546,0.0013655969,0.0005214631,0.000004655603,0.000004264208,0.000019433748,0.0006527615],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9973983,0.0002765839,0.0013814125,0.00020023993,0.00059185346,0.00015161271],"domain_scores_gemma":[0.9982577,0.00020269255,0.0005332092,0.0002510736,0.0003113373,0.00044396444],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021877694,0.00013470091,0.00055504293,0.00016558664,0.000052524865,0.000013151156,0.000111400965,0.00017479381,0.0002658377],"category_scores_gemma":[0.00081721856,0.00007766865,0.0005003083,0.00018789213,0.00015419986,0.0002092425,0.000015439044,0.00030438614,0.000017512028],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0037778856,0.0036945594,0.29532877,0.0005666111,0.0010360609,0.0006705537,0.000715285,0.000017524017,0.32271567,0.0005975322,0.015586733,0.35529283],"study_design_scores_gemma":[0.022844799,0.004890814,0.89533675,0.0014487437,0.0024291186,0.00018685478,0.00013854595,0.00020110224,0.046379566,0.0058469926,0.019995695,0.00030103122],"about_ca_topic_score_codex":0.00001708458,"about_ca_topic_score_gemma":0.000019151103,"teacher_disagreement_score":0.600008,"about_ca_system_score_codex":0.000032841934,"about_ca_system_score_gemma":0.00017643678,"threshold_uncertainty_score":0.31672356},"labels":[],"label_agreement":null},{"id":"W2560187753","doi":"10.1172/jci88648","title":"Deficiency in prohormone convertase PC1 impairs prohormone processing in Prader-Willi syndrome","year":2016,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Genetic Syndromes and Imprinting","field":"Biochemistry, Genetics and Molecular Biology","cited_by":176,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"National Institute of Diabetes and Digestive and Kidney Diseases","keywords":"Prohormone convertase; Endocrinology; Prohormone; Internal medicine; Biology; Proinsulin; Knockout mouse; Hormone; Gene; Medicine; Insulin; Genetics","score_opus":0.0408665860268086,"score_gpt":0.3312495679486059,"score_spread":0.2903829819217973,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2560187753","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99660224,0.0008190908,0.0006925953,0.0014444144,0.00015596159,0.00021066717,0.000001294131,0.0000036521567,0.00007006462],"genre_scores_gemma":[0.9967717,0.00026351152,0.0025423076,0.00017658618,0.00013130684,0.0000075997004,0.0000033772178,0.00001626591,0.00008734686],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99746186,0.00019026997,0.0015736179,0.00026416522,0.00024629149,0.0002638148],"domain_scores_gemma":[0.9986336,0.000060135695,0.00080542866,0.00016799061,0.00016110134,0.00017171833],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020413175,0.00013994737,0.00035410412,0.00013320237,0.00002795335,0.000024099789,0.00020111223,0.00022556349,0.0000072788207],"category_scores_gemma":[0.0018714366,0.00009622261,0.000117859425,0.00017956499,0.0001770654,0.00003271372,0.000061510036,0.0002335212,0.000005083976],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020462034,0.00021295817,0.8078134,0.00005120884,0.000011764986,0.000014909134,0.00010440923,0.000040349725,0.15734869,0.0000149285415,0.00017299021,0.034193914],"study_design_scores_gemma":[0.0021920884,0.0011887157,0.986733,0.00036873342,0.000015733185,0.00028544082,0.000085643806,0.00022601838,0.0074702753,0.0008491676,0.00041193148,0.00017325772],"about_ca_topic_score_codex":0.000009658543,"about_ca_topic_score_gemma":0.000020671489,"teacher_disagreement_score":0.17891958,"about_ca_system_score_codex":0.000030247844,"about_ca_system_score_gemma":0.00037821522,"threshold_uncertainty_score":0.3923844},"labels":[],"label_agreement":null},{"id":"W2560401565","doi":"10.1172/jci88017","title":"Pancreatic β cell identity requires continual repression of non–β cell programs","year":2016,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":138,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; School of Medicine, Indiana University; National Cancer Institute; Consejo Nacional de Ciencia y Tecnología; National Institutes of Health; Université de Genève; York University; University of Colorado Denver; NYU Langone Medical Center","keywords":"Enteroendocrine cell; Biology; Reprogramming; Cell; Transcription factor; Cell biology; Gene; Psychological repression; Cell type; Phenotype; Islet; Downregulation and upregulation; Endocrine system; Insulin; Endocrinology; Genetics; Gene expression; Hormone","score_opus":0.07521647418405705,"score_gpt":0.3801622942873212,"score_spread":0.3049458201032641,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2560401565","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947492,0.00021301759,0.001304888,0.0008723322,0.00053134153,0.00018946297,0.0000016423054,0.00001419369,0.0021239305],"genre_scores_gemma":[0.9916962,0.00021757268,0.0055484357,0.0003191195,0.0005386332,0.0000026828143,0.0000034628458,0.000012000363,0.0016619149],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9970802,0.00021584495,0.0018802788,0.00015750763,0.0005238408,0.0001423018],"domain_scores_gemma":[0.9961084,0.0008491253,0.0018629078,0.0002433808,0.000590572,0.00034557458],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002165002,0.00011129249,0.0006895729,0.000101151636,0.00003166564,0.0000149048365,0.00010291458,0.00017040675,0.00011373396],"category_scores_gemma":[0.0042147203,0.00006300436,0.00030972066,0.00015896364,0.00029225583,0.00044195156,0.000028323422,0.00022067211,0.000027969252],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005432198,0.00048041248,0.6724683,0.0002073456,0.000061394465,0.000015492971,0.00014274483,0.0000013735718,0.3078805,0.000052021078,0.003986074,0.014161128],"study_design_scores_gemma":[0.010408351,0.0041648964,0.58356917,0.0032008525,0.0007695427,0.00003277734,0.00018815549,0.00021823433,0.3908973,0.0043973676,0.0019747817,0.0001785781],"about_ca_topic_score_codex":0.000011582952,"about_ca_topic_score_gemma":7.974009e-7,"teacher_disagreement_score":0.08889916,"about_ca_system_score_codex":0.000026580155,"about_ca_system_score_gemma":0.00026526098,"threshold_uncertainty_score":0.50457186},"labels":[],"label_agreement":null},{"id":"W2563063938","doi":"10.1172/jci89354","title":"Astrocytic calcium release mediates peri-infarct depolarizations in a rodent stroke model","year":2016,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Neuroscience and Neuropharmacology Research","field":"Neuroscience","cited_by":86,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of California, San Diego; Deutsches Zentrum für Neurodegenerative Erkrankungen; Deutsche Forschungsgemeinschaft; European Commission; Canadian Institutes of Health Research; EU Joint Programme – Neurodegenerative Disease Research","keywords":"Glutamate receptor; Calcium; Calcium in biology; Ischemia; Stroke (engine); Neuroscience; Calcium imaging; Medicine; Biology; Pathology; Internal medicine; Endocrinology; Receptor","score_opus":0.20231707546111172,"score_gpt":0.4413152203005916,"score_spread":0.2389981448394799,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2563063938","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9893231,0.000015388921,0.0023822216,0.0074708625,0.0005781774,0.00015205597,0.000010802851,0.000015159413,0.000052269355],"genre_scores_gemma":[0.9959694,0.00031176722,0.0002989267,0.0027775238,0.00023593903,0.000006353385,1.7029477e-7,0.000015003621,0.0003848992],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9963596,0.00085442304,0.0013769473,0.00034012034,0.00072801625,0.00034093493],"domain_scores_gemma":[0.9963843,0.002158837,0.00062895555,0.0001844317,0.00016609032,0.00047735756],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0015806644,0.00012801238,0.00033031934,0.0003174146,0.00011117971,0.000051318682,0.0004747066,0.00011179143,0.000035160483],"category_scores_gemma":[0.01765599,0.00008418823,0.00015765039,0.00042730747,0.00067849975,0.0008077121,0.000094302864,0.0006752789,0.000039277664],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013615348,0.00014390826,0.05285173,0.000005425222,0.0000024974631,0.00008442924,0.000049283688,0.0012776258,0.9437494,0.00025286738,0.00021094935,0.0012356964],"study_design_scores_gemma":[0.0027842543,0.0007784313,0.044648238,0.00009591434,0.000030122634,0.00010036191,0.000014409811,0.043750767,0.9039085,0.0035502433,0.00017028868,0.00016845796],"about_ca_topic_score_codex":0.000003403658,"about_ca_topic_score_gemma":0.000005129071,"teacher_disagreement_score":0.04247314,"about_ca_system_score_codex":0.00006172805,"about_ca_system_score_gemma":0.0007773257,"threshold_uncertainty_score":0.9906187},"labels":[],"label_agreement":null},{"id":"W2564762943","doi":"10.1172/jci88879","title":"Immunologic impact of the intestine in metabolic disease","year":2017,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Dietary Effects on Health","field":"Medicine","cited_by":77,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; Toronto General Hospital; Diabetes Canada; University of Toronto","funders":"Toronto General Hospital Research Institute, University Health Network; Canadian Institutes of Health Research; University of Toronto; J.P. Bickell Foundation; Canadian Diabetes Association","keywords":"Immune system; Inflammation; Insulin resistance; Systemic inflammation; Obesity; Diabetes mellitus; Immunity; Immunology; Carbohydrate metabolism; Disease; Acquired immune system; Biology; Endocrinology; Medicine; Internal medicine","score_opus":0.4269777535452439,"score_gpt":0.579447917175087,"score_spread":0.15247016362984311,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2564762943","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.031375576,0.96628207,0.0000016200174,0.00064563635,0.00081831485,0.0007914132,0.000012358088,0.000005105939,0.000067916655],"genre_scores_gemma":[0.008680654,0.9901163,0.0003089706,0.00014179765,0.00063595193,0.0000064372357,0.000011024739,0.00002628745,0.000072582574],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.993821,0.0014841965,0.0038802568,0.00018596827,0.00044006054,0.00018851072],"domain_scores_gemma":[0.98866224,0.0019129005,0.0078027253,0.0008022267,0.00036132953,0.00045856234],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.005289152,0.00027034886,0.003764538,0.00028104344,0.000035628458,0.000016783828,0.00053443597,0.00031270232,0.000024292662],"category_scores_gemma":[0.04388795,0.00012766376,0.0024535798,0.0003081533,0.00051000534,0.00016196827,0.000090545815,0.0020068367,0.000010687706],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002068999,0.00030486844,0.06633078,0.0066002193,0.00042754467,0.00007289361,0.000013146802,0.000007553153,0.0000011980567,0.000047986556,0.00040256747,0.9255843],"study_design_scores_gemma":[0.0015299416,0.0016047418,0.7847101,0.07924709,0.0036195926,0.00019842919,0.0000020452326,0.0000733836,9.621536e-7,0.0012743933,0.12757681,0.00016249478],"about_ca_topic_score_codex":0.00004986426,"about_ca_topic_score_gemma":0.0000038042554,"teacher_disagreement_score":0.92542183,"about_ca_system_score_codex":0.00012339359,"about_ca_system_score_gemma":0.0055688387,"threshold_uncertainty_score":0.98788804},"labels":[],"label_agreement":null},{"id":"W2569110440","doi":"10.1172/jci91081","title":"Adaptor proteins NUMB and NUMBL promote cell cycle withdrawal by targeting ERBB2 for degradation","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Hippo pathway signaling and YAP/TAZ","field":"Biochemistry, Genetics and Molecular Biology","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Neurological Disorders and Stroke; National Heart, Lung, and Blood Institute; Daiichi Sankyo Europe; National Institute on Aging; University of California, San Diego; National Cancer Institute; Yale University; National Institutes of Health; University of California, Los Angeles; Kansai Medical University","keywords":"NUMB; Cell biology; Downregulation and upregulation; Endosome; Notch signaling pathway; YAP1; Biology; Signal transduction; Signal transducing adaptor protein; Cell cycle; Cell; Transcription factor","score_opus":0.035913638124435966,"score_gpt":0.3351261989184913,"score_spread":0.29921256079405534,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2569110440","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9915656,0.00020940344,0.006767383,0.0008853388,0.00023877156,0.00023494069,0.000018713756,0.000004348368,0.00007553912],"genre_scores_gemma":[0.9797476,0.00007313257,0.018695295,0.00015154976,0.00094017555,0.0000058535793,0.000052066414,0.00001745776,0.00031685532],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986887,0.00010403257,0.0007153797,0.00019758778,0.0001568252,0.00013750159],"domain_scores_gemma":[0.9980879,0.00005218958,0.0012216079,0.00018135316,0.00026759572,0.00018934224],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016161363,0.000108047716,0.00022303098,0.000018596897,0.00025272506,0.00009906502,0.00017886337,0.00020301134,0.0000017985271],"category_scores_gemma":[0.0021986153,0.00009205899,0.000121774705,0.000016647287,0.00015990723,0.000029611776,0.000035375622,0.00018811157,0.0000012753964],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015468977,0.00007110134,0.012537499,0.00003871135,0.000030811538,0.0000011761297,0.000042980362,0.000016169066,0.9813079,0.000021288486,0.0018474453,0.003930212],"study_design_scores_gemma":[0.0023525467,0.001772442,0.004653336,0.00012264833,0.00006986526,0.000013096666,0.00004907023,0.0020351673,0.9708799,0.0019392659,0.01587955,0.00023311586],"about_ca_topic_score_codex":0.000011931557,"about_ca_topic_score_gemma":0.00000421887,"teacher_disagreement_score":0.014032103,"about_ca_system_score_codex":0.000007007586,"about_ca_system_score_gemma":0.00016973898,"threshold_uncertainty_score":0.37540564},"labels":[],"label_agreement":null},{"id":"W2583432826","doi":"10.1172/jci89626","title":"Mutations in sphingosine-1-phosphate lyase cause nephrosis with ichthyosis and adrenal insufficiency","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Renal Diseases and Glomerulopathies","field":"Medicine","cited_by":208,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; McGill University; Alberta Health Services","funders":"National Cancer Institute; National Human Genome Research Institute; National Health and Medical Research Council; Agence Nationale de la Recherche; National Center of Competence in Research Chemical Biology; National Center for Advancing Translational Sciences; National Research Foundation of Korea; Medical Research Council; Deutsche Akademie der Naturforscher Leopoldina - Nationale Akademie der Wissenschaften; Yonsei University; Yonsei University College of Medicine; Deutsche Forschungsgemeinschaft; National Research Foundation; National Institute of General Medical Sciences; Ontario Genomics Institute; Australian National University; European Commission; National Institute of Diabetes and Digestive and Kidney Diseases; ASN Foundation for Kidney Research; SystemsX.ch; Institut des maladies génétiques Imagine; Swim Across America; Sociedad Española de Nefrología; National Institutes of Health; Yale University; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Ontario Genomics; Genome Canada; Canadian Institutes of Health Research; National Science Foundation","keywords":"Biology; Ichthyosis; Nephrotic syndrome; Slit diaphragm; Missense mutation; Mutation; Phenotype; Adrenal insufficiency; Endocrinology; Internal medicine; Genetics; Medicine; Gene; Kidney; Podocyte","score_opus":0.07279641078227955,"score_gpt":0.3840905821315097,"score_spread":0.31129417134923015,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2583432826","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99360496,0.0005961482,0.00009794467,0.005289031,0.00014823668,0.00012339375,0.000004644976,0.000006342192,0.00012927371],"genre_scores_gemma":[0.9960432,0.0008613033,0.0020640562,0.0007027564,0.00026649446,0.0000027976541,0.000004173009,0.000010730331,0.00004449715],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983222,0.000074668766,0.0009787453,0.00015154333,0.00033753365,0.00013530404],"domain_scores_gemma":[0.9978106,0.00021330701,0.0010593705,0.00021682847,0.000301219,0.00039868263],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00084083376,0.00011263608,0.00042426266,0.00013800574,0.00015214169,0.000103339786,0.00009716788,0.000087667606,0.000015332333],"category_scores_gemma":[0.0029801526,0.0000765244,0.000112109454,0.00012229188,0.0005081827,0.0005181358,0.000029991685,0.00035350476,0.0000032984917],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005329391,0.00033030962,0.99094856,0.000070830785,0.000067085806,0.0002505555,0.00019919546,0.000057214518,0.00036261562,0.00021759381,0.0002378984,0.0067252135],"study_design_scores_gemma":[0.0028963643,0.0013343756,0.99212253,0.00078701996,0.00029269845,0.00013440306,0.00006879043,0.00068904983,0.00044859352,0.0009284882,0.00020936102,0.00008831838],"about_ca_topic_score_codex":0.00008051728,"about_ca_topic_score_gemma":0.000049325823,"teacher_disagreement_score":0.006636895,"about_ca_system_score_codex":0.000022542818,"about_ca_system_score_gemma":0.00032533164,"threshold_uncertainty_score":0.3567736},"labels":[],"label_agreement":null},{"id":"W2584913109","doi":"10.1172/jci89455","title":"Targeting the adenosine 2A receptor enhances chimeric antigen receptor T cell efficacy","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"CAR-T cell therapy research","field":"Medicine","cited_by":321,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Peter MacCallum Cancer Centre","keywords":"Chimeric antigen receptor; Cancer research; Adenosine; T cell; CD8; Antigen; Adenosine A2A receptor; Immunology; Receptor; Chemistry; Medicine; Adenosine receptor; Biology; Pharmacology; Immune system; Internal medicine","score_opus":0.11478170529418573,"score_gpt":0.4295939475704932,"score_spread":0.31481224227630744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2584913109","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9736769,0.0007489386,0.00008357565,0.02216284,0.0015789095,0.00033708217,0.0000020243483,0.0000151038585,0.0013945819],"genre_scores_gemma":[0.9790823,0.003754917,0.0053841327,0.0010059308,0.0064157466,0.0000039059682,0.000012540987,0.000038968858,0.0043015913],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99665457,0.000465768,0.0015564621,0.00022402083,0.0008261105,0.0002730491],"domain_scores_gemma":[0.9951717,0.0011788377,0.0021359387,0.0005335212,0.0005753466,0.00040461746],"candidate_categories":["metaresearch","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.005168532,0.0001598,0.00060897594,0.00008647118,0.0004101944,0.00016192258,0.0005647771,0.00018416537,0.0017924565],"category_scores_gemma":[0.009536851,0.00009791174,0.00036965997,0.00014450015,0.00072908995,0.0003339617,0.000084831874,0.0012142959,0.00016847851],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011196471,0.0003588737,0.11746644,0.000059113765,0.00019830247,0.000016026575,0.0004901883,0.000018554409,0.78416723,0.000025778394,0.04830845,0.047771413],"study_design_scores_gemma":[0.006603254,0.0029808453,0.34838885,0.00074175536,0.00021399483,0.000046801713,0.00029418853,0.0006097345,0.3909094,0.0005105523,0.24837977,0.00032086734],"about_ca_topic_score_codex":0.000019900906,"about_ca_topic_score_gemma":0.0000012640672,"teacher_disagreement_score":0.39325783,"about_ca_system_score_codex":0.00004984423,"about_ca_system_score_gemma":0.00045616232,"threshold_uncertainty_score":0.99912006},"labels":[],"label_agreement":null},{"id":"W2590455134","doi":"10.1172/jci91211","title":"Targeting PPARγ in the epigenome rescues genetic metabolic defects in mice","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Adipose Tissue and Metabolism","field":"Medicine","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Nutrition, Metabolism and Diabetes","funders":"National Institutes of Health; JPB Foundation; National Institute of Diabetes and Digestive and Kidney Diseases; University of Pennsylvania","keywords":"Rosiglitazone; Endocrinology; Internal medicine; Epigenome; Insulin resistance; Adipose tissue; White adipose tissue; Biology; PRDM16; Adipocyte; Epigenomics; Insulin; Gene expression; Gene; Genetics; Medicine; DNA methylation","score_opus":0.11205087909154357,"score_gpt":0.4098355529084539,"score_spread":0.2977846738169103,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2590455134","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9891737,0.0058183908,0.000026830445,0.0039210897,0.00044580593,0.00019417153,4.3049906e-7,0.0000032809967,0.0004163143],"genre_scores_gemma":[0.9917452,0.0018393819,0.0034559465,0.0014251224,0.0014426928,0.0000029606897,0.0000015414194,0.000011115176,0.000076073346],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99748826,0.0004518367,0.0014158551,0.00013208245,0.00033033412,0.00018162091],"domain_scores_gemma":[0.99787503,0.00046335353,0.0010882084,0.00027209707,0.0001436079,0.00015770459],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0047317166,0.000099434954,0.0005618438,0.00013313247,0.000084018706,0.000047339363,0.00029419505,0.00013295373,0.000012332302],"category_scores_gemma":[0.0089724185,0.00006344603,0.0001551619,0.00011377874,0.00019651062,0.0002472824,0.00003089813,0.00072194735,0.000016205828],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001748564,0.00017848251,0.9711883,0.000040110506,0.000051395295,0.00031471613,0.0014479617,0.00008476408,0.010113652,0.0006797115,0.0005278502,0.015198187],"study_design_scores_gemma":[0.0016560196,0.00015906303,0.9843678,0.00017939907,0.0001378434,0.000045358636,0.00012025558,0.00012291345,0.00093516003,0.005086742,0.007124905,0.00006453402],"about_ca_topic_score_codex":0.0000889178,"about_ca_topic_score_gemma":0.000059435813,"teacher_disagreement_score":0.015133653,"about_ca_system_score_codex":0.0000134982565,"about_ca_system_score_gemma":0.00022677128,"threshold_uncertainty_score":0.9993754},"labels":[],"label_agreement":null},{"id":"W2594862203","doi":"10.1172/jci87442","title":"Laminar flow downregulates Notch activity to promote lymphatic sprouting","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Lymphatic System and Diseases","field":"Medicine","cited_by":137,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Heart, Lung, and Blood Institute; National Institutes of Health; National Institute of Biomedical Imaging and Bioengineering; National Eye Institute; China Scholarship Council; American Heart Association","keywords":"KLF2; Lymphatic Endothelium; Cell biology; Lymphatic system; ORAI1; Sprouting angiogenesis; Chemistry; Biology; Immunology; Downregulation and upregulation; Cancer research; Angiogenesis; Biochemistry; Neovascularization","score_opus":0.11379292100032853,"score_gpt":0.42155456837871064,"score_spread":0.3077616473783821,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2594862203","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99035376,0.00005536981,0.0004640483,0.0074817897,0.0007328269,0.0002989992,0.0000019297854,0.000016088663,0.00059521146],"genre_scores_gemma":[0.9871308,0.000010364703,0.010256089,0.0006795937,0.00157152,0.0000031826348,0.0000015900773,0.000014718645,0.00033214915],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99783504,0.00016466429,0.001143562,0.00017714601,0.00050781853,0.00017178524],"domain_scores_gemma":[0.9966029,0.0003390513,0.0015417453,0.00044041793,0.00043167878,0.0006441998],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0025213235,0.0001291193,0.00063018274,0.000080738224,0.00018989322,0.00012155016,0.00020344401,0.00012690596,0.000030571293],"category_scores_gemma":[0.014328751,0.000092458824,0.00027699044,0.000067464585,0.00016209223,0.00043034842,0.000056052355,0.00006329061,0.000049675775],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009197883,0.0005324218,0.76906294,0.00039393103,0.00024740034,0.00018899301,0.0005287509,0.00006025166,0.02015021,0.00010093284,0.0024296085,0.20538479],"study_design_scores_gemma":[0.002693681,0.0007950143,0.97912604,0.0014676331,0.00030450852,0.00013928475,0.000050690913,0.0033144334,0.010235872,0.0013733179,0.00038128742,0.00011826025],"about_ca_topic_score_codex":0.000018445133,"about_ca_topic_score_gemma":0.0000036994384,"teacher_disagreement_score":0.2100631,"about_ca_system_score_codex":0.00006764295,"about_ca_system_score_gemma":0.00053594855,"threshold_uncertainty_score":0.993974},"labels":[],"label_agreement":null},{"id":"W2595778438","doi":"10.1172/jci89452","title":"Amino acid–insensitive mTORC1 regulation enables nutritional stress resilience in hematopoietic stem cells","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Hematopoietic Stem Cell Transplantation","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; Canadian Institutes of Health Research; Harvard Stem Cell Institute; National Cancer Institute; National Institutes of Health; Fondation pour la Recherche Médicale; National Institute on Aging; Dubai Harvard Foundation for Medical Research; Massachusetts General Hospital","keywords":"mTORC1; RHEB; Biology; Cell biology; PI3K/AKT/mTOR pathway; Progenitor cell; Stem cell; Nutrient sensing; Signal transduction","score_opus":0.07957725908692895,"score_gpt":0.36268789681925756,"score_spread":0.2831106377323286,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2595778438","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948389,0.000090920745,0.001685177,0.0019840437,0.0005129811,0.0003006531,0.000010552796,0.000011690371,0.00056509493],"genre_scores_gemma":[0.9955004,0.00016908567,0.0033452073,0.00025752583,0.00052320614,0.0000039847664,0.000012966825,0.000014206494,0.00017342046],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9965603,0.00030558676,0.0019402201,0.00025004774,0.00074687676,0.00019701061],"domain_scores_gemma":[0.9962838,0.00072914315,0.0017740804,0.00035966438,0.0005540001,0.0002992725],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021423912,0.00015737928,0.000633973,0.00019114315,0.00013691724,0.0000785808,0.0001877432,0.00026041616,0.000036422116],"category_scores_gemma":[0.0007803607,0.00013811323,0.0002028312,0.00011087744,0.00041808537,0.0005581636,0.000021639964,0.00050764607,0.000023469576],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015858728,0.0008431959,0.805256,0.0011813886,0.00014028022,0.0007812512,0.002090674,0.0005259401,0.1756386,0.003392839,0.0010811508,0.0074827834],"study_design_scores_gemma":[0.0037234914,0.0004121947,0.6966054,0.0031353228,0.00013248072,0.00027619884,0.00042680447,0.0011248747,0.28980076,0.0041424395,0.00007340149,0.00014664482],"about_ca_topic_score_codex":0.000019851552,"about_ca_topic_score_gemma":0.000022749782,"teacher_disagreement_score":0.11416216,"about_ca_system_score_codex":0.00009125827,"about_ca_system_score_gemma":0.0003777502,"threshold_uncertainty_score":0.5632094},"labels":[],"label_agreement":null},{"id":"W2605235307","doi":"10.1172/jci90129","title":"Isolated polycystic liver disease genes define effectors of polycystin-1 function","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Genetic and Kidney Cyst Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":208,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"National Center for Advancing Translational Sciences; Yale University; National Institutes of Health; National Institute of Diabetes and Digestive and Kidney Diseases; PKD Australia; National Human Genome Research Institute; Mayo Clinic","keywords":"Polycystic liver disease; Biology; Gene; Loss function; Genetics; Polycystic kidney disease; Candidate gene; Autosomal dominant polycystic kidney disease; Cilium; PKD1; Exome sequencing; Mutation; Medicine; Internal medicine; Phenotype; Kidney","score_opus":0.03963397570603641,"score_gpt":0.33049083393593587,"score_spread":0.2908568582298995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2605235307","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933855,0.0019928436,0.003324161,0.00029774813,0.00082326913,0.000101673315,0.000013816077,0.0000035171981,0.000057497757],"genre_scores_gemma":[0.99754345,0.00038291505,0.00082080223,0.00024845474,0.0008140556,0.0000018025042,0.000027847818,0.0000140511065,0.00014659156],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984412,0.00017857394,0.0008706464,0.00016879292,0.00021820528,0.00012257344],"domain_scores_gemma":[0.9974026,0.000076503165,0.0014148821,0.00036880188,0.00029599224,0.00044121357],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00060441607,0.00012367933,0.00028701563,0.00004838617,0.00011052544,0.000032003394,0.00024608476,0.0001450985,0.000018549714],"category_scores_gemma":[0.0039846445,0.00010123978,0.0002898885,0.000034003035,0.00031870982,0.000016015552,0.00006439169,0.00012206961,0.0000050620924],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0055951476,0.00032202978,0.6086438,0.00015132311,0.00034591946,0.0000284121,0.000016575614,0.00022329694,0.36519185,0.000048489022,0.0039409082,0.015492272],"study_design_scores_gemma":[0.0013620746,0.0013798428,0.9713018,0.0001220458,0.00036567776,0.000012707824,0.0000068668323,0.0007220273,0.022803545,0.0006493856,0.0011366259,0.00013742392],"about_ca_topic_score_codex":0.000017830247,"about_ca_topic_score_gemma":0.0000041091257,"teacher_disagreement_score":0.362658,"about_ca_system_score_codex":0.000005277952,"about_ca_system_score_gemma":0.00033950192,"threshold_uncertainty_score":0.47702798},"labels":[],"label_agreement":null},{"id":"W2610213115","doi":"10.1172/jci91038","title":"Endocannabinoid signaling in hypothalamic circuits regulates arousal from general anesthesia in mice","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Sleep and Wakefulness Research","field":"Neuroscience","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"National Institute on Drug Abuse; National Institutes of Health; National Natural Science Foundation of China; Fourth Military Medical University; University of Ottawa; Canadian Institutes of Health Research; JPB Foundation","keywords":"Glutamatergic; Endocannabinoid system; Neuroscience; GABAergic; Excitatory postsynaptic potential; Lateral hypothalamus; Preoptic area; Arousal; Hypothalamus; Inhibitory postsynaptic potential; Glutamate receptor; Endocrinology; Chemistry; Internal medicine; Medicine; Psychology; Receptor","score_opus":0.1619572609209045,"score_gpt":0.39538990426772497,"score_spread":0.23343264334682046,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2610213115","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99621904,0.00005186147,0.000021184449,0.0031047855,0.00034736795,0.00012206351,0.0000016573207,0.000007299677,0.00012476332],"genre_scores_gemma":[0.9982628,0.000059376805,0.00036038607,0.0005459964,0.0006868451,0.000003985622,0.0000012144849,0.000016463931,0.00006290359],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.996515,0.0007941732,0.0014987839,0.00031137688,0.00058748876,0.00029321836],"domain_scores_gemma":[0.9969148,0.001315607,0.0011507922,0.0002930573,0.000110557194,0.00021518275],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0023742951,0.00013299739,0.00046178233,0.00023464188,0.00012737268,0.00020898598,0.00073257956,0.00018274623,0.000021575739],"category_scores_gemma":[0.011789112,0.000116701514,0.00013546071,0.0001705253,0.0004255348,0.00081675465,0.000054121898,0.00086508004,0.000016306989],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010447452,0.00014734751,0.51976925,0.000009212614,0.0000065522827,0.0010067,0.00020524063,0.0008200358,0.46551067,0.0003208425,0.00008873138,0.012010967],"study_design_scores_gemma":[0.0015580598,0.00012688407,0.62864155,0.00016649245,0.000008216613,0.000087289656,0.000022166303,0.0031343705,0.34485105,0.021232702,0.000052916595,0.00011834534],"about_ca_topic_score_codex":0.00024030574,"about_ca_topic_score_gemma":0.00006189195,"teacher_disagreement_score":0.12065962,"about_ca_system_score_codex":0.000061083745,"about_ca_system_score_gemma":0.0002830669,"threshold_uncertainty_score":0.996535},"labels":[],"label_agreement":null},{"id":"W2610261021","doi":"10.1172/jci90825","title":"Gene expression and mutation-guided synthetic lethality eradicates proliferating and quiescent leukemia cells","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"PARP inhibition in cancer therapy","field":"Medicine","cited_by":76,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research; McGill University Health Centre; Princess Margaret Cancer Centre; University of Toronto; Pediatric Oncology Group; University Health Network","funders":"National Institute on Aging; Austrian Science Fund; Temple University; Rotary Foundation; Canadian Institutes of Health Research; Leukemia and Lymphoma Society; National Cancer Institute; National Institutes of Health; European Commission; FP7 Research Potential of Convergence Regions; University of Texas MD Anderson Cancer Center; American Society of Hematology","keywords":"Synthetic lethality; PARP1; Biology; Cancer research; Leukemia; DNA repair; Molecular biology; DNA; Poly ADP ribose polymerase; Polymerase; Genetics","score_opus":0.13283052333399334,"score_gpt":0.4257841127992257,"score_spread":0.2929535894652323,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2610261021","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9915471,0.00032327705,0.00045735098,0.0069966763,0.00036891713,0.00018822968,0.0000025452025,0.000010365677,0.00010554877],"genre_scores_gemma":[0.9833257,0.0005043707,0.014283762,0.0010839304,0.0007486129,0.0000044537105,0.0000025882925,0.0000105756,0.000035980338],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979781,0.00020744007,0.0011913779,0.00018557589,0.0003281099,0.00010942094],"domain_scores_gemma":[0.99712247,0.00041046992,0.0016264236,0.00023986674,0.00027161546,0.000329153],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020915528,0.00010998472,0.00041659508,0.0000569965,0.00024319168,0.00010383197,0.00008043525,0.0001387396,0.000016784406],"category_scores_gemma":[0.0025878472,0.00008499178,0.00008167515,0.00002626463,0.0005396958,0.00033203498,0.00003243992,0.0003926205,0.0000019927886],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046010915,0.0001040547,0.19637008,0.00022016943,0.0000995174,0.00006841694,0.0007557216,0.00005703657,0.78238726,0.00014593842,0.0030255637,0.01630613],"study_design_scores_gemma":[0.004170918,0.00047827835,0.17854297,0.001010667,0.00012429034,0.0004156996,0.000054388427,0.0013737835,0.807596,0.005657655,0.0004451367,0.00013015472],"about_ca_topic_score_codex":0.000013399549,"about_ca_topic_score_gemma":0.000001149981,"teacher_disagreement_score":0.02520879,"about_ca_system_score_codex":0.0000670873,"about_ca_system_score_gemma":0.00030887517,"threshold_uncertainty_score":0.3465864},"labels":[],"label_agreement":null},{"id":"W2613572458","doi":"10.1172/jci92450","title":"Neutrophil-derived S100 calcium-binding proteins A8/A9 promote reticulated thrombocytosis and atherogenesis in diabetes","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"S100 Proteins and Annexins","field":"Biochemistry, Genetics and Molecular Biology","cited_by":227,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; Medical Research Council; NYU Langone Medical Center; Baker Heart and Diabetes Institute; Diabetes Australia; York University; University of Alabama; National Institutes of Health; Diabetes Australia Research Trust; University of Alabama at Birmingham; National Health and Medical Research Council","keywords":"Thrombocytosis; Platelet; Internal medicine; Thrombopoietin; Endocrinology; Medicine; Diabetes mellitus; Platelet activation; CD36; Receptor; Immunology; Biology; Cell biology; Stem cell","score_opus":0.0755240779911421,"score_gpt":0.362002348624719,"score_spread":0.2864782706335769,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2613572458","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99787885,0.00021678975,0.00006439683,0.0013827838,0.00015802497,0.00024910865,0.0000041520902,0.0000043025134,0.0000416141],"genre_scores_gemma":[0.99686843,0.00022765168,0.0022043437,0.00017428472,0.00045384053,0.000007938041,0.0000079980655,0.000019813067,0.000035707657],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99833524,0.00018311398,0.0008700458,0.00025033,0.00016832532,0.0001929647],"domain_scores_gemma":[0.99826413,0.000033489177,0.001030472,0.00030734643,0.00017732786,0.000187202],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001206709,0.0001457028,0.00037833347,0.000058258393,0.00016514245,0.00010209955,0.000241284,0.00027749006,0.0000066760767],"category_scores_gemma":[0.001639968,0.000118781194,0.0001558723,0.000050816685,0.0003264352,0.000033653403,0.00010604298,0.00025649602,0.000002108012],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058048892,0.000060861505,0.19099733,0.000019686453,0.00005539422,0.0000073449833,0.000040363997,0.000012753843,0.80595076,0.000020962862,0.000034510234,0.0027420027],"study_design_scores_gemma":[0.0012198454,0.0007391234,0.3939576,0.00020343742,0.000038351765,0.000008953954,0.00002035454,0.00026563313,0.60248375,0.00059179723,0.00032361128,0.00014752125],"about_ca_topic_score_codex":0.000019987452,"about_ca_topic_score_gemma":0.000019200592,"teacher_disagreement_score":0.20346698,"about_ca_system_score_codex":0.000013012231,"about_ca_system_score_gemma":0.00012267262,"threshold_uncertainty_score":0.48437566},"labels":[],"label_agreement":null},{"id":"W2615896933","doi":"10.1172/jci89935","title":"MYC-dependent oxidative metabolism regulates osteoclastogenesis via nuclear receptor ERRα","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Bone Metabolism and Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":113,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; Weill Cornell Medical College; National Institutes of Health; Hospital for Special Surgery","keywords":"Osteoclast; Osteoporosis; Transcription factor; Osteoblast; Endocrinology; Estrogen-related receptor alpha; Internal medicine; Receptor; Nuclear receptor; Bone remodeling; Cell biology; Bone resorption; Chemistry; Cancer research; Estrogen receptor; Biology; Medicine; In vitro; Biochemistry","score_opus":0.04301113085025202,"score_gpt":0.3388063590332908,"score_spread":0.29579522818303877,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2615896933","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99588495,0.0010087701,0.00025200794,0.0012164216,0.0012219629,0.00008989097,0.000016486672,0.0000059054114,0.00030359588],"genre_scores_gemma":[0.9922334,0.00066951214,0.003866413,0.00066104525,0.0021602488,0.0000018884823,0.000019732704,0.000024926681,0.0003628249],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980533,0.00027689725,0.00096933026,0.00024068229,0.00030021605,0.00015958934],"domain_scores_gemma":[0.9970509,0.000057227382,0.0016515902,0.00049410085,0.0004015813,0.00034463737],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001168482,0.00015423808,0.00041317596,0.000047278885,0.00022027582,0.000106935986,0.00043777173,0.00023304213,0.000065030494],"category_scores_gemma":[0.0030935996,0.00012558469,0.00034480076,0.000032050375,0.00037900227,0.00004868763,0.00014035929,0.00019227543,0.000033773318],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00093470135,0.00024143734,0.024292314,0.000023739434,0.0003526735,0.000010479436,0.000083999155,0.000044779088,0.93049616,0.0005224904,0.013831341,0.029165877],"study_design_scores_gemma":[0.003029063,0.00062980986,0.4265223,0.00007999169,0.0004274954,0.00003847502,0.00010897274,0.000073866424,0.48123792,0.004426497,0.08302863,0.00039697808],"about_ca_topic_score_codex":0.000014970655,"about_ca_topic_score_gemma":0.00000653115,"teacher_disagreement_score":0.44925827,"about_ca_system_score_codex":0.0000064270107,"about_ca_system_score_gemma":0.00017342829,"threshold_uncertainty_score":0.5121195},"labels":[],"label_agreement":null},{"id":"W2616644093","doi":"10.1172/jci92373","title":"Sodium channel NaV1.9 mutations associated with insensitivity to pain dampen neuronal excitability","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Ion channel regulation and function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":92,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Xenon Pharmaceuticals (Canada)","funders":"National Institute of Neurological Disorders and Stroke","keywords":"Sodium channel; Depolarization; Dorsal root ganglion; Mutation; NAV1; Membrane potential; Neuroscience; Phenotype; Biology; Medicine; Genetics; Endocrinology; Chemistry; Gene; Sensory system; Sodium","score_opus":0.08212353005331292,"score_gpt":0.35531504401893027,"score_spread":0.27319151396561736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2616644093","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9828721,0.0000046228065,0.011763384,0.0043367706,0.0007499497,0.00013083355,0.0000071224513,0.00000589878,0.0001292623],"genre_scores_gemma":[0.99681735,0.0000046515092,0.0005867331,0.0012789525,0.0010530835,0.0000032557998,0.000054521326,0.000011528003,0.00018990008],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99822795,0.00056012,0.00063308154,0.00019487075,0.0002609044,0.00012309516],"domain_scores_gemma":[0.99767005,0.00020569582,0.0009541252,0.00025829583,0.00067277526,0.00023904981],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.003915396,0.00010348417,0.00022179587,0.000046205143,0.00023451546,0.00007380922,0.00015283792,0.00016798136,0.000007890311],"category_scores_gemma":[0.014603653,0.00008499993,0.00013007122,0.00005686606,0.00022321362,0.000032317075,0.000046012057,0.00020641624,0.000004108892],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0035732845,0.0012468904,0.8512507,0.000056167664,0.0006473255,0.000039802555,0.0007012743,0.008669095,0.09503532,0.0003789403,0.017285224,0.021115975],"study_design_scores_gemma":[0.001148724,0.0013048848,0.9857244,0.00005512744,0.00003340055,0.000011541582,0.00005138958,0.0033868244,0.005826466,0.0012283012,0.0010925938,0.00013635357],"about_ca_topic_score_codex":0.000008420784,"about_ca_topic_score_gemma":0.000075512275,"teacher_disagreement_score":0.1344737,"about_ca_system_score_codex":0.000021244725,"about_ca_system_score_gemma":0.00023876439,"threshold_uncertainty_score":0.99369675},"labels":[],"label_agreement":null},{"id":"W2621167148","doi":"10.1172/jci92233","title":"Ubiquitin ligase RNF146 coordinates bone dynamics and energy metabolism","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; Mount Sinai Hospital; Lunenfeld-Tanenbaum Research Institute; McGill University Health Centre; Domtar (Canada); Princess Margaret Cancer Centre; University of Toronto; University Health Network","funders":"Japan Society for the Promotion of Science; Canadian Institutes of Health Research; Ontario Institute for Cancer Research","keywords":"Ubiquitin ligase; Energy metabolism; Metabolism; DNA ligase; Ubiquitin; Bone remodeling; Dynamics (music); Chemistry; Computational biology; Biochemistry; Cell biology; Bioinformatics; Biology; Enzyme; Genetics; Physics; Endocrinology","score_opus":0.041032451241122835,"score_gpt":0.33575998367667864,"score_spread":0.29472753243555583,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2621167148","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99426806,0.0010818604,0.00087049924,0.0024225144,0.000469797,0.000034441528,0.000010844355,0.000003628128,0.00083837745],"genre_scores_gemma":[0.9938667,0.0010052109,0.002430494,0.00077902863,0.0012317215,0.0000022659344,0.000019944924,0.000013894943,0.000650739],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986455,0.00015752317,0.00074995734,0.00016645051,0.00014945895,0.0001311103],"domain_scores_gemma":[0.9980001,0.0000666306,0.0011619364,0.00027462718,0.000248693,0.00024801213],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014176018,0.000112695474,0.00030914485,0.000037601807,0.0001644246,0.00010111381,0.00021816435,0.00021870938,0.000008620485],"category_scores_gemma":[0.0026098497,0.00009514165,0.00014949188,0.000020876421,0.0003532752,0.000023876217,0.0001168022,0.00020345497,0.0000016643597],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010426224,0.00036404878,0.13281012,0.00012502607,0.0005209384,0.00012481568,0.00014776996,0.000035230438,0.4470643,0.041058023,0.011795143,0.36491197],"study_design_scores_gemma":[0.003664936,0.0014712289,0.13666712,0.00020143753,0.00021464183,0.00030173443,0.000090755704,0.001946615,0.76742744,0.026812268,0.060710933,0.0004908991],"about_ca_topic_score_codex":0.000019078772,"about_ca_topic_score_gemma":0.000033703815,"teacher_disagreement_score":0.36442107,"about_ca_system_score_codex":0.00000554571,"about_ca_system_score_gemma":0.0001277259,"threshold_uncertainty_score":0.3879764},"labels":[],"label_agreement":null},{"id":"W2627062370","doi":"10.1172/jci89934","title":"Lipogenic transcription factor ChREBP mediates fructose-induced metabolic adaptations to prevent hepatotoxicity","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Liver Disease Diagnosis and Treatment","field":"Medicine","cited_by":104,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institutes of Health; McMaster University; University of Minnesota","keywords":"Carbohydrate-responsive element-binding protein; Fructose; Transcription factor; Biology; Endocrinology; Chemistry; Internal medicine; Cell biology; Biochemistry; Medicine; Gene","score_opus":0.17285460531602187,"score_gpt":0.4165621666235441,"score_spread":0.24370756130752225,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2627062370","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9891552,0.0004668387,0.00007752151,0.008836184,0.0008651835,0.00047918834,0.000023563187,0.000015280595,0.00008106704],"genre_scores_gemma":[0.9950699,0.0008354004,0.001775497,0.0011289753,0.0010894857,0.00002089664,0.000013183888,0.000016889337,0.00004972957],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99767405,0.0001793483,0.0012559544,0.00020432987,0.000523405,0.00016290967],"domain_scores_gemma":[0.9971199,0.0002659012,0.0010683049,0.00037048277,0.00045302635,0.00072240614],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007202191,0.0001573638,0.00061769434,0.00012226564,0.00018881836,0.0000807671,0.00018272261,0.00013871906,0.000099373654],"category_scores_gemma":[0.002976006,0.000116917814,0.0005219363,0.000076728094,0.00008902251,0.00044495854,0.000022745116,0.00029672481,0.000051674913],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006085283,0.0033268076,0.82353216,0.00007783138,0.0016496736,0.00009922311,0.0015552097,0.000030987816,0.09427871,0.0007548316,0.0017703174,0.072315685],"study_design_scores_gemma":[0.0019022957,0.0008770613,0.93880165,0.00021426477,0.0007718517,0.000013039255,0.000035283585,0.00011172517,0.055423107,0.0010211006,0.00072732865,0.0001012856],"about_ca_topic_score_codex":0.000059129492,"about_ca_topic_score_gemma":0.00004371351,"teacher_disagreement_score":0.11526946,"about_ca_system_score_codex":0.000056836558,"about_ca_system_score_gemma":0.00043498556,"threshold_uncertainty_score":0.47677702},"labels":[],"label_agreement":null},{"id":"W2726190005","doi":"10.1172/jci64981","title":"Loss of memory B cells during chronic HIV infection is driven by Foxo3a- and TRAIL-mediated apoptosis","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cambodian History and Society","field":"Social Sciences","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; National Institutes of Health; Genome Canada","keywords":"Apoptosis; Human immunodeficiency virus (HIV); Immunology; Medicine; Virology; Biology; Cancer research; Genetics","score_opus":0.0483317623115032,"score_gpt":0.3407060067614723,"score_spread":0.29237424444996907,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2726190005","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99727786,0.00038309378,0.000048528895,0.0010403139,0.00080276746,0.00008410883,0.0000074639065,0.000010100178,0.00034574783],"genre_scores_gemma":[0.9968783,0.0012972185,0.00020194233,0.00021822135,0.0011058307,0.0000011039112,0.0000024054739,0.00000699854,0.00028794826],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99812543,0.0004174031,0.0008440931,0.000092352304,0.0003454634,0.00017523223],"domain_scores_gemma":[0.9980491,0.0004350312,0.0009255281,0.000068748675,0.00016077497,0.00036083],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002431621,0.00007597646,0.0002959415,0.00005177852,0.00019818204,0.000018531577,0.000082140985,0.0002342847,0.00009949745],"category_scores_gemma":[0.0007628769,0.000073326395,0.00020052257,0.00016711386,0.0007027062,0.00064934755,0.000014189606,0.00034354677,0.000008943665],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007980342,0.00033308374,0.8521517,0.00017652065,0.0001808654,0.000001254008,0.047570053,0.000044469165,0.05552831,0.00039552688,0.040145107,0.003393294],"study_design_scores_gemma":[0.0057370416,0.00085917476,0.80579036,0.000550595,0.00055678416,0.000012148145,0.003305073,0.00027012755,0.10246498,0.0019088931,0.07778669,0.00075814157],"about_ca_topic_score_codex":0.000074067706,"about_ca_topic_score_gemma":0.000031107866,"teacher_disagreement_score":0.046936672,"about_ca_system_score_codex":0.00016038805,"about_ca_system_score_gemma":0.0002550615,"threshold_uncertainty_score":0.29901636},"labels":[],"label_agreement":null},{"id":"W2734554345","doi":"10.1172/jci94378","title":"An erythroid-specific ATP2B4 enhancer mediates red blood cell hydration and malaria susceptibility","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Erythrocyte Function and Pathophysiology","field":"Medicine","cited_by":86,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Heart Institute","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; Medical Research Council; British Heart Foundation; Cancer Research UK","keywords":"Biology; Genome-wide association study; Enhancer; Quantitative trait locus; Expression quantitative trait loci; Locus (genetics); Phenotype; Genetics; Epigenomics; Single-nucleotide polymorphism; Genotype; Transcriptome; Gene; Transcription factor; Gene expression; DNA methylation","score_opus":0.08072702147503362,"score_gpt":0.3752455949388032,"score_spread":0.2945185734637696,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2734554345","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9928797,0.00021422222,0.00018613163,0.004936336,0.0012241139,0.00015184944,0.0000021193225,0.000015925429,0.00038960925],"genre_scores_gemma":[0.99126077,0.0011645559,0.0041849297,0.0007085059,0.00251189,0.0000017067749,0.000019854091,0.000013444753,0.00013434772],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99783856,0.0003055414,0.001201734,0.00025569607,0.0002667054,0.00013175282],"domain_scores_gemma":[0.9969082,0.00029255953,0.0014871326,0.00045713727,0.00045339848,0.00040159439],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019928764,0.0001267331,0.0005185525,0.00006840021,0.00019741833,0.00006747117,0.00012150337,0.00028400173,0.0001683559],"category_scores_gemma":[0.0017208648,0.000098775716,0.00015000973,0.000042827785,0.00049446383,0.00054855994,0.000025905238,0.0005456061,0.00001468026],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010324994,0.0005186991,0.38666725,0.00008013812,0.00006808959,0.000035328445,0.0002738148,0.00001072996,0.60337037,0.00019708896,0.0029629404,0.0047830204],"study_design_scores_gemma":[0.0035532604,0.0028114708,0.94431007,0.00009577621,0.0001865397,0.00006298569,0.00006999,0.00042512815,0.04304825,0.0039835633,0.0013404147,0.00011255804],"about_ca_topic_score_codex":0.000007941493,"about_ca_topic_score_gemma":0.000017453021,"teacher_disagreement_score":0.5603221,"about_ca_system_score_codex":0.000019040037,"about_ca_system_score_gemma":0.00018672609,"threshold_uncertainty_score":0.40279567},"labels":[],"label_agreement":null},{"id":"W2741007090","doi":"10.1172/jci90890","title":"TNF is required for TLR ligand–mediated but not protease-mediated allergic airway inflammation","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Asthma and respiratory diseases","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Center for Advancing Translational Sciences; National Institute of Environmental Health Sciences; National Institute of Allergy and Infectious Diseases; School of Medicine, University of North Carolina at Chapel Hill; National Institutes of Health","keywords":"Immunology; Proteases; Sensitization; Medicine; Inflammation; Tumor necrosis factor alpha; Allergic inflammation; Adjuvant; Eosinophilic; Biology; Pathology","score_opus":0.10375183394460337,"score_gpt":0.3872086290871227,"score_spread":0.28345679514251937,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2741007090","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9792949,0.00011135266,0.00031713588,0.018573327,0.00071183965,0.00077015214,0.000032209457,0.000031572465,0.00015754171],"genre_scores_gemma":[0.99116725,0.00013157715,0.0014168252,0.0034246682,0.0031624525,0.000026303991,0.00006194693,0.000031943753,0.00057705666],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9967505,0.00015841471,0.0020307642,0.00023188621,0.0006047254,0.0002237327],"domain_scores_gemma":[0.99406815,0.0006657934,0.0030529036,0.00041634665,0.0010737008,0.0007231092],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0019618804,0.00018834732,0.00069191575,0.00013908574,0.00027726628,0.0000933439,0.00024018454,0.0003531827,0.00004750712],"category_scores_gemma":[0.021310156,0.00013903884,0.00047165388,0.00007774901,0.00041922845,0.0006117635,0.00003677806,0.00043148504,0.00006307531],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.01800459,0.0015655367,0.34049597,0.0015855621,0.001446638,0.00055491086,0.0013463413,0.000095882715,0.3652551,0.00035888096,0.095122725,0.17416789],"study_design_scores_gemma":[0.020911083,0.005110364,0.7126641,0.0017720285,0.0008030589,0.00007691683,0.00018820794,0.0062530283,0.17628106,0.002518901,0.072901204,0.0005199879],"about_ca_topic_score_codex":0.000007120226,"about_ca_topic_score_gemma":0.0000029621185,"teacher_disagreement_score":0.37216818,"about_ca_system_score_codex":0.000046613754,"about_ca_system_score_gemma":0.0009573706,"threshold_uncertainty_score":0.98693377},"labels":[],"label_agreement":null},{"id":"W2741133420","doi":"10.1172/jci93488","title":"GATA4 loss of function in liver cancer impedes precursor to hepatocyte transition","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Biomedical Research Council; National Medical Research Council; National Institute of General Medical Sciences; Medical Research Council; Terry Fox Foundation; National Cancer Centre of Singapore; National Cancer Institute; National Institutes of Health; Cleveland Clinic","keywords":"Haploinsufficiency; Biology; GATA4; Cancer research; Hepatocyte; Hepatoblastoma; Genetics; Molecular biology; Gene; Transcription factor; Phenotype; Internal medicine; Medicine","score_opus":0.07873833877609238,"score_gpt":0.39277062521215145,"score_spread":0.31403228643605907,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2741133420","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99412656,0.00058718486,0.00400281,0.0006703542,0.00041105555,0.000116020055,0.000006914808,0.0000010635064,0.00007806603],"genre_scores_gemma":[0.9965957,0.0013436188,0.0012749062,0.00015949935,0.0005690189,0.0000039532238,0.0000095414125,0.000008251735,0.000035522662],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986855,0.00013204993,0.00079853926,0.00013340986,0.00016446447,0.00008606198],"domain_scores_gemma":[0.9984994,0.000039855982,0.0008528169,0.00019506656,0.0002971733,0.000115673574],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011880383,0.000073936884,0.00021371462,0.0000597296,0.000045764085,0.000022822862,0.00013984676,0.0001631759,0.00000979702],"category_scores_gemma":[0.0009119133,0.00006634664,0.00012184125,0.00004123105,0.000104687264,0.000023230741,0.000024053517,0.00012948217,0.0000016129335],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011337954,0.00013306047,0.44123563,0.000060293216,0.00007537922,0.00000495849,0.00024909654,0.0023213555,0.5069868,0.000086941065,0.00031732625,0.047395322],"study_design_scores_gemma":[0.00094115146,0.001023082,0.6897696,0.0001429913,0.000047112077,0.0000016437609,0.000016567134,0.00046281406,0.3042726,0.0015670239,0.0016619998,0.00009342664],"about_ca_topic_score_codex":0.00007998844,"about_ca_topic_score_gemma":0.0002429904,"teacher_disagreement_score":0.24853395,"about_ca_system_score_codex":0.000012064792,"about_ca_system_score_gemma":0.00014399244,"threshold_uncertainty_score":0.27055374},"labels":[],"label_agreement":null},{"id":"W2742580821","doi":"10.1172/jci87406","title":"Epiregulin and EGFR interactions are involved in pain processing","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pain Mechanisms and Treatments","field":"Medicine","cited_by":118,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University; University of Toronto","funders":"National Institute of Dental and Craniofacial Research; National Institute on Aging; Canadian Pain Society; National Health and Medical Research Council; Canadian Institutes of Health Research; University at Buffalo; University of North Carolina at Chapel Hill; National Institutes of Health; Louise and Alan Edwards Foundation; McGill University; Emory University; Medical Research Council; Battelle","keywords":"Epiregulin; Epidermal growth factor receptor; PI3K/AKT/mTOR pathway; Chronic pain; Cancer research; Protein kinase B; Receptor tyrosine kinase; Tyrosine kinase; Receptor; Medicine; Chemistry; Signal transduction; Cell biology; Biology; Neuroscience; Internal medicine; Amphiregulin","score_opus":0.1802133457176293,"score_gpt":0.4424194082111994,"score_spread":0.26220606249357015,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2742580821","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9897261,0.00014139408,0.00061046146,0.009106395,0.0001904988,0.00008835213,4.6621562e-7,0.000004614802,0.00013167993],"genre_scores_gemma":[0.99047405,0.00008373181,0.008045562,0.00097227294,0.0002986318,0.0000018780157,0.0000015748019,0.000006765992,0.000115525836],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99874574,0.00017980469,0.0007449843,0.000099184,0.00015147177,0.00007883987],"domain_scores_gemma":[0.9980697,0.00026637924,0.0011915406,0.00013022531,0.00015362779,0.0001885291],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0027253167,0.00006788314,0.00032713785,0.00008056809,0.00010106859,0.00005477795,0.00005914062,0.00007927506,0.000008473862],"category_scores_gemma":[0.0061481334,0.000050665796,0.000074562,0.000035511268,0.000121952056,0.00034852946,0.000018284909,0.000336499,0.0000022685551],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010274572,0.00014306653,0.9305667,0.000042076248,0.000028876713,0.00008498424,0.000108516375,0.00000191271,0.00052007014,0.00006250509,0.00023727033,0.06810123],"study_design_scores_gemma":[0.002270744,0.0002796277,0.9824096,0.0013355269,0.00006844864,0.00003117081,0.0002057556,0.0037328738,0.0004261572,0.00880197,0.00038902735,0.000049121674],"about_ca_topic_score_codex":0.000017717028,"about_ca_topic_score_gemma":0.00008885336,"teacher_disagreement_score":0.068052106,"about_ca_system_score_codex":0.000034214114,"about_ca_system_score_gemma":0.00013299698,"threshold_uncertainty_score":0.73603344},"labels":[],"label_agreement":null},{"id":"W2748215501","doi":"10.1172/jci94031","title":"Mice expressing KrasG12D in hematopoietic multipotent progenitor cells develop neonatal myeloid leukemia","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Acute Myeloid Leukemia Research","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; National Heart, Lung, and Blood Institute; National Cancer Institute; National Institutes of Health; University of Toronto; School of Medicine, Indiana University; Riley Children's Foundation","keywords":"Juvenile myelomonocytic leukemia; Progenitor cell; Biology; Myeloid; Haematopoiesis; Cancer research; Immunology; Stem cell; Cell biology","score_opus":0.09245152628540647,"score_gpt":0.39662340188534867,"score_spread":0.3041718755999422,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2748215501","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941401,0.00018972425,0.0005831392,0.0036771232,0.00077403587,0.00040986028,0.0000023508296,0.00001562164,0.00020802696],"genre_scores_gemma":[0.95302576,0.00014033719,0.044572443,0.00047702124,0.0013866712,0.000008850066,0.000005824638,0.00003694812,0.00034614909],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99582946,0.00031277913,0.0022892347,0.00030847167,0.0008828011,0.00037724007],"domain_scores_gemma":[0.995448,0.00067965564,0.0018677197,0.00051153084,0.0008459642,0.00064713997],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0038351084,0.0002108721,0.00081453065,0.00023590923,0.00020210595,0.00015408797,0.0005295012,0.0003678038,0.000033002707],"category_scores_gemma":[0.010257259,0.00016981702,0.00026195706,0.00017378949,0.0005934197,0.0006680662,0.00018235517,0.0016585775,0.00006063216],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025300416,0.000435057,0.5472105,0.0006647562,0.00034830795,0.0033188201,0.0023166733,0.0002301971,0.34423837,0.00011820257,0.0077731917,0.09081587],"study_design_scores_gemma":[0.011969969,0.000666494,0.66150624,0.002456695,0.00018409162,0.0013708759,0.0004699308,0.0067475648,0.30978817,0.0013114084,0.003128689,0.00039987755],"about_ca_topic_score_codex":0.000059608305,"about_ca_topic_score_gemma":0.000011864791,"teacher_disagreement_score":0.11429572,"about_ca_system_score_codex":0.00058939157,"about_ca_system_score_gemma":0.0032736417,"threshold_uncertainty_score":0.9980798},"labels":[],"label_agreement":null},{"id":"W2755692623","doi":"10.1172/jci96839","title":"Mice deficient for ERAD machinery component Sel1L develop central diabetes insipidus","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Neuroendocrine regulation and behavior","field":"Psychology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital du Sacré-Cœur de Montréal","funders":"","keywords":"Diabetes insipidus; Endoplasmic-reticulum-associated protein degradation; Endocrinology; Internal medicine; Aquaporin 2; Antidiuretic; Vasopressin; Thirst; Biology; Unfolded protein response; Medicine; Endoplasmic reticulum; Cell biology","score_opus":0.16799900665632947,"score_gpt":0.44560208844482213,"score_spread":0.2776030817884927,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2755692623","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98278433,0.00006730873,0.00041158113,0.011538641,0.004744446,0.00021683509,0.000010829407,0.000015728001,0.0002103049],"genre_scores_gemma":[0.9927962,0.000007412212,0.0040607136,0.001147347,0.001099918,0.000007935522,0.000013392677,0.000019358726,0.0008477233],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9975509,0.0002560454,0.0014546049,0.00019839022,0.0002657432,0.00027429327],"domain_scores_gemma":[0.99661016,0.00054848683,0.0018435662,0.00029268768,0.00039863394,0.00030647774],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009804298,0.00013522136,0.0004115446,0.00008856702,0.0002259005,0.00010294894,0.0003369645,0.00009410541,0.000065519285],"category_scores_gemma":[0.0017385563,0.000109745626,0.00025783165,0.000055550172,0.00022233797,0.00023327509,0.000044411932,0.00037288805,0.000023826387],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023789878,0.00053606735,0.920269,0.000028077957,0.000106190666,0.000032051314,0.00020901476,0.000051002637,0.005263359,0.0033381574,0.033086307,0.03684284],"study_design_scores_gemma":[0.002116102,0.00032140428,0.9655344,0.00005222142,0.00010236142,0.000041477484,0.000022252154,0.0004372119,0.001967176,0.0010974447,0.028183337,0.0001246259],"about_ca_topic_score_codex":0.000009365895,"about_ca_topic_score_gemma":0.000007360343,"teacher_disagreement_score":0.045265354,"about_ca_system_score_codex":0.000030413212,"about_ca_system_score_gemma":0.00013653992,"threshold_uncertainty_score":0.44752967},"labels":[],"label_agreement":null},{"id":"W2757802282","doi":"10.1172/jci95442","title":"Mutations in the netrin-1 gene cause congenital mirror movements","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Axon Guidance and Neuronal Signaling","field":"Neuroscience","cited_by":61,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Neurological Institute and Hospital; McGill University","funders":"Merz Pharmaceuticals; Royal Society; Marsden Fund; Agence Nationale de la Recherche; Fondation Desmarest","keywords":"Netrin; Biology; Axon guidance; Cell biology; Extracellular; Genetics; Mutation; Gene; Neuroscience; Axon","score_opus":0.317214897720388,"score_gpt":0.446799366039676,"score_spread":0.129584468319288,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2757802282","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99581546,0.000020329444,0.000063958665,0.0029667562,0.00060286187,0.00011599924,0.0000034674129,0.00000391654,0.0004072663],"genre_scores_gemma":[0.9951377,0.00007029047,0.00034218485,0.004088094,0.00027100957,0.000002831596,6.5684475e-7,0.000006767375,0.00008046239],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978193,0.00037723524,0.0010675818,0.00014417806,0.00045596794,0.00013571027],"domain_scores_gemma":[0.9971214,0.0011389956,0.0012990999,0.00023959839,0.00009209466,0.00010879071],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0017517273,0.00007923215,0.00019695665,0.00006520079,0.0002694818,0.00014674594,0.0005801715,0.00006328372,0.000017185883],"category_scores_gemma":[0.009694539,0.00005389986,0.0001241926,0.00009536372,0.00032170227,0.0005922714,0.00003965132,0.00045274428,0.000024391977],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026968803,0.00049950177,0.5130473,0.0000146418,0.000042333497,0.00080974895,0.0010298421,0.0002410107,0.47313595,0.0029513692,0.0008869848,0.0070716627],"study_design_scores_gemma":[0.001665755,0.00037877445,0.86829126,0.000052828116,0.0000377118,0.000081065155,0.00007565517,0.0006622837,0.1158867,0.011590292,0.0011593072,0.000118350064],"about_ca_topic_score_codex":0.000023724922,"about_ca_topic_score_gemma":0.000024611072,"teacher_disagreement_score":0.35724926,"about_ca_system_score_codex":0.000014806715,"about_ca_system_score_gemma":0.00013133045,"threshold_uncertainty_score":0.9986472},"labels":[],"label_agreement":null},{"id":"W2762054879","doi":"10.1172/jci96036","title":"mTORC1 stimulates phosphatidylcholine synthesis to promote triglyceride secretion","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Lipid metabolism and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":101,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Nutrition, Metabolism and Diabetes","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; University of Pennsylvania; National Institutes of Health; American Diabetes Association","keywords":"mTORC1; Secretion; Postprandial; Biochemistry; Lipid metabolism; Internal medicine; Very low-density lipoprotein; Chemistry; Endocrinology; Biology; PI3K/AKT/mTOR pathway; Lipoprotein; Signal transduction; Cholesterol; Medicine; Insulin","score_opus":0.05349823584442829,"score_gpt":0.3656280386875698,"score_spread":0.3121298028431415,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2762054879","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962389,0.0001445671,0.0010292438,0.0015050913,0.0008012643,0.00013037598,0.0000072377657,0.000005269573,0.00013806406],"genre_scores_gemma":[0.9862015,0.000180193,0.009859905,0.00055296597,0.0029545927,0.0000039029046,0.000006850273,0.000017375434,0.00022270101],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981685,0.00014243246,0.0010550433,0.00021899352,0.00025874045,0.00015625717],"domain_scores_gemma":[0.99752015,0.00011971827,0.0012328075,0.00045177693,0.0003449587,0.0003305761],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0021044062,0.0001369156,0.0003765328,0.000054045086,0.00018070839,0.00010365847,0.00042297898,0.00022032857,0.0000253059],"category_scores_gemma":[0.0158077,0.00010552532,0.00023110688,0.000040551007,0.00014575178,0.00003348721,0.000088495115,0.0001629965,0.000020440359],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011810402,0.00023056759,0.06329522,0.000044167395,0.00024071832,0.00000891518,0.00009647873,0.00016388383,0.7530816,0.000083721345,0.005224932,0.17634873],"study_design_scores_gemma":[0.0006042345,0.0003689126,0.12820886,0.00015253677,0.00010661015,0.0000104867295,0.000010898171,0.00012294663,0.7908307,0.00023082909,0.0791816,0.00017140176],"about_ca_topic_score_codex":0.000007897756,"about_ca_topic_score_gemma":0.0000067097794,"teacher_disagreement_score":0.17617734,"about_ca_system_score_codex":0.00000854025,"about_ca_system_score_gemma":0.00019121564,"threshold_uncertainty_score":0.99248254},"labels":[],"label_agreement":null},{"id":"W2763401475","doi":"10.1172/jci93437","title":"Proprotein convertase furin regulates osteocalcin and bone endocrine function","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Vitamin D Research Studies","field":"Medicine","cited_by":75,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut de Readaptation Gingras Lindsay de Montreal; McGill University; Université du Québec; Université de Montréal; Montreal Clinical Research Institute","funders":"Canadian Institutes of Health Research; Canadian Diabetes Association; Canada Research Chairs; Natural Sciences and Engineering Research Council of Canada; Université de Sherbrooke; Johns Hopkins University; Université de Montréal","keywords":"Furin; Osteocalcin; Endocrinology; Proprotein convertase; Internal medicine; Chemistry; Proprotein Convertases; Osteoblast; Biology; Biochemistry; Alkaline phosphatase; Lipoprotein; In vitro; Cholesterol; Medicine; LDL receptor; Enzyme","score_opus":0.110902220689382,"score_gpt":0.42365423091733334,"score_spread":0.31275201022795135,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2763401475","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98056966,0.0005437594,0.000065508,0.017921733,0.000338061,0.00028773377,0.0000014059121,0.000011127593,0.00026098458],"genre_scores_gemma":[0.9953799,0.0004143815,0.0018173354,0.00034437474,0.00092034787,0.0000052180867,0.0000029073594,0.000011352823,0.0011041583],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980049,0.00015995187,0.0010355767,0.00016277027,0.00047383373,0.0001629591],"domain_scores_gemma":[0.9974157,0.00030128556,0.0010679335,0.00030185352,0.0005428933,0.00037028734],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.00225032,0.00011052756,0.00053252577,0.00009903443,0.0002157724,0.00006981762,0.00009331605,0.000098937264,0.000031918036],"category_scores_gemma":[0.014412399,0.00007487522,0.00013474576,0.000037264068,0.0006540071,0.00036709596,0.000096931806,0.00055731856,0.000012224432],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022008887,0.00038646208,0.7996139,0.00056704006,0.0005363443,0.00070801564,0.00022304441,0.000004178152,0.048934914,0.00076444505,0.012007375,0.13405342],"study_design_scores_gemma":[0.0041579003,0.0024364856,0.9650857,0.00048006888,0.00017465434,0.0002620464,0.00007366906,0.00028385283,0.020966183,0.004449736,0.0015498073,0.00007989008],"about_ca_topic_score_codex":0.000021901287,"about_ca_topic_score_gemma":0.000010248968,"teacher_disagreement_score":0.16547184,"about_ca_system_score_codex":0.000026124211,"about_ca_system_score_gemma":0.00017578741,"threshold_uncertainty_score":0.99388963},"labels":[],"label_agreement":null},{"id":"W2763583412","doi":"10.1172/jci91258","title":"MNK1/2 inhibition limits oncogenicity and metastasis of KIT-mutant melanoma","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cutaneous Melanoma Detection and Management","field":"Medicine","cited_by":77,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital; McGill University","funders":"Wallonie-Bruxelles International; Jewish General Hospital; Canadian Institutes of Health Research; Narodowe Centrum Badań i Rozwoju; Réseau de cancérologie Rossy; McGill University","keywords":"EIF4E; Cancer research; Melanoma; Receptor tyrosine kinase; Biology; Targeted therapy; Kinase; Translation (biology); Molecular biology; Cancer; Gene; Messenger RNA; Cell biology; Genetics","score_opus":0.11809667177075721,"score_gpt":0.38793992139436,"score_spread":0.2698432496236028,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2763583412","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9936472,0.00008737323,0.000334695,0.004240263,0.00048548053,0.000157006,0.0000032251444,0.000007802356,0.0010369569],"genre_scores_gemma":[0.9960327,0.0003070738,0.0025972684,0.00048459726,0.0003986929,9.823997e-7,0.0000020876669,0.000008796562,0.00016777973],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980959,0.00011743433,0.0012218677,0.00012861783,0.000345592,0.00009053474],"domain_scores_gemma":[0.9971168,0.00018137545,0.0018589767,0.00024414438,0.00034261434,0.00025608006],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016537958,0.00009213613,0.000508803,0.00011714575,0.000101794925,0.000038841234,0.000072421826,0.00011174384,0.000043044787],"category_scores_gemma":[0.0030390443,0.00007205385,0.00020905929,0.00005129994,0.00026925543,0.00020923665,0.00004117589,0.00028733743,0.0000051117577],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004058495,0.0012020061,0.38932097,0.0007245372,0.0018347519,0.0010203162,0.0007248689,0.000031209285,0.21853192,0.0042356737,0.0057824748,0.37253278],"study_design_scores_gemma":[0.0061830757,0.004448774,0.8148914,0.00071008166,0.0013834381,0.0015272982,0.00020718857,0.0007825111,0.15344593,0.0058824234,0.010333929,0.00020395186],"about_ca_topic_score_codex":0.000021780615,"about_ca_topic_score_gemma":0.000019944137,"teacher_disagreement_score":0.42557043,"about_ca_system_score_codex":0.000032652137,"about_ca_system_score_gemma":0.00012872201,"threshold_uncertainty_score":0.36382395},"labels":[],"label_agreement":null},{"id":"W2765509977","doi":"10.1172/jci96185","title":"siRNA rescues nonhuman primates from advanced Marburg and Ravn virus disease","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Arbutus Biopharma (Canada)","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Marburg virus; Virology; Biology; Virus; Disease; Ebola virus; Medicine; Computational biology; Pathology","score_opus":0.13059801837614865,"score_gpt":0.4724590146823972,"score_spread":0.34186099630624855,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2765509977","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99217474,0.00046549115,0.00009251434,0.006245487,0.00037805396,0.00012930321,0.000008214009,0.000010478379,0.00049568637],"genre_scores_gemma":[0.9943164,0.0013199882,0.0023221658,0.00050975545,0.0010604566,0.0000020933994,0.0000085644115,0.000012386957,0.00044818537],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984459,0.00011295165,0.00082849216,0.00015218553,0.0003328042,0.00012766581],"domain_scores_gemma":[0.99775577,0.00030890066,0.0007151365,0.0002851061,0.00032577495,0.00060930883],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010414371,0.00009321852,0.00038796978,0.000079328565,0.00024839523,0.00013559438,0.000115564544,0.00009307397,0.00007894309],"category_scores_gemma":[0.004677982,0.000067169414,0.00016137937,0.000036046305,0.000443735,0.00048684143,0.00006912707,0.00048441257,0.000012773584],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001586543,0.00023822159,0.9018627,0.00007431325,0.00015182696,0.00016225227,0.00006804333,0.00001100803,0.023242377,0.00024504587,0.002565025,0.06979265],"study_design_scores_gemma":[0.0020847146,0.00051654805,0.9811041,0.00035175143,0.00013608363,0.000012231192,0.000015437487,0.0007496695,0.0032901692,0.00827866,0.003387458,0.00007322423],"about_ca_topic_score_codex":0.00009633949,"about_ca_topic_score_gemma":0.000023057917,"teacher_disagreement_score":0.079241365,"about_ca_system_score_codex":0.000025081072,"about_ca_system_score_gemma":0.00020650071,"threshold_uncertainty_score":0.56003195},"labels":[],"label_agreement":null},{"id":"W2765988140","doi":"10.1172/jci94417","title":"GLIS3 is indispensable for TSH/TSHR-dependent thyroid hormone biosynthesis and follicular cell proliferation","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Growth Hormone and Insulin-like Growth Factors","field":"Medicine","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institutes of Health; National Institute of Environmental Health Sciences; Pennsylvania State University","keywords":"Follicular phase; Thyroid; Endocrinology; Internal medicine; Cell growth; Hormone; Thyroid-stimulating hormone; Chemistry; Biology; Medicine; Biochemistry","score_opus":0.07672950915312715,"score_gpt":0.35942573311713066,"score_spread":0.2826962239640035,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2765988140","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9895802,0.00061591587,0.00076875486,0.007724834,0.00037629006,0.0005224954,0.000011724796,0.000012363833,0.00038737786],"genre_scores_gemma":[0.9919144,0.00084854115,0.004312694,0.0014168022,0.0010557291,0.000008836534,0.000010903739,0.000026536156,0.00040556272],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974442,0.00009517034,0.0015025027,0.0002558502,0.00048511356,0.00021713968],"domain_scores_gemma":[0.99643016,0.0003260425,0.0018237544,0.0003771958,0.00057619746,0.00046662934],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002168148,0.00018515268,0.00068113935,0.00014284455,0.000309336,0.00017008877,0.0001847568,0.00031960465,0.000015135073],"category_scores_gemma":[0.0036341886,0.0001410387,0.0003088595,0.000060610735,0.00023021121,0.00069523585,0.00004688487,0.0004242276,0.000011971999],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0031830869,0.0009195819,0.7686489,0.00041114652,0.00062027463,0.00007833818,0.0012675908,0.000008648822,0.1585634,0.00053906546,0.04805079,0.017709155],"study_design_scores_gemma":[0.0105760945,0.005196249,0.68840253,0.0002730456,0.0010206704,0.00010476447,0.00020295748,0.0014774556,0.27791777,0.008190555,0.0062660193,0.00037191669],"about_ca_topic_score_codex":0.00001667457,"about_ca_topic_score_gemma":0.000003499648,"teacher_disagreement_score":0.11935435,"about_ca_system_score_codex":0.00003821662,"about_ca_system_score_gemma":0.00027758753,"threshold_uncertainty_score":0.57513916},"labels":[],"label_agreement":null},{"id":"W2766150382","doi":"10.1172/jci90004","title":"Loss of mTORC1 signaling alters pancreatic α cell mass and impairs glucagon secretion","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Diabetes Canada","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; National Institutes of Health; Eunice Kennedy Shriver National Institute of Child Health and Human Development; University of Michigan; University of Miami; U.S. Department of Veterans Affairs","keywords":"mTORC1; Glucagon; Regulator; Biology; Secretion; Endocrinology; Internal medicine; Glucose homeostasis; Signal transduction; Cell biology; Alpha cell; PI3K/AKT/mTOR pathway; Insulin; Insulin resistance; Beta cell; Islet; Biochemistry; Medicine; Gene","score_opus":0.06490688597260487,"score_gpt":0.35369078320298275,"score_spread":0.2887838972303779,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2766150382","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99641603,0.00020486405,0.0009329964,0.001132845,0.00040560338,0.00010983837,0.0000017636663,0.0000073044844,0.0007887601],"genre_scores_gemma":[0.99375397,0.00023870838,0.004960396,0.0003709257,0.00052906014,9.837345e-7,0.0000044978233,0.000010425624,0.00013104852],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99810326,0.00014080912,0.0012008798,0.00012193671,0.00031989938,0.000113235226],"domain_scores_gemma":[0.9966432,0.0005631634,0.0019164477,0.00022490912,0.0003199752,0.00033234167],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018914783,0.000102815895,0.0005855117,0.00009099893,0.00008961381,0.000037427744,0.00008431454,0.00013870178,0.00004193981],"category_scores_gemma":[0.0039471914,0.00007883473,0.00018689843,0.00004475876,0.00037340188,0.00027401536,0.000016947708,0.00028630422,0.0000043760497],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042568048,0.00007944816,0.8606393,0.0002491959,0.00010242956,0.000016598295,0.00015040381,0.000036534686,0.1363256,0.00011674978,0.0003619591,0.0014961169],"study_design_scores_gemma":[0.0073783086,0.0027683028,0.81403697,0.0015845258,0.0010096891,0.000064848246,0.00036855094,0.0042645717,0.15968812,0.0082822535,0.00036588128,0.00018801363],"about_ca_topic_score_codex":0.000016092872,"about_ca_topic_score_gemma":3.7565508e-7,"teacher_disagreement_score":0.046602353,"about_ca_system_score_codex":0.000025018006,"about_ca_system_score_gemma":0.00019544137,"threshold_uncertainty_score":0.4725442},"labels":[],"label_agreement":null},{"id":"W2766320271","doi":"10.1172/jci95545","title":"Angiopoietin-1 is required for Schlemm’s canal development in mice and humans","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Platelet Disorders and Treatments","field":"Medicine","cited_by":199,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Cancer Institute; National Eye Institute; Universidade de São Paulo; National Heart, Lung, and Blood Institute; Ophthalmic Research Institute of Australia; Mallinckrodt Pharmaceuticals; Research to Prevent Blindness; National Institutes of Health; March of Dimes Foundation; University of Wisconsin-Madison; Japan Society for the Promotion of Science; Howard Hughes Medical Institute","keywords":"Schlemm's canal; Angiopoietin; Anatomy; Medicine; Biology; Ophthalmology; Internal medicine; Glaucoma; VEGF receptors","score_opus":0.14848631863683615,"score_gpt":0.4199408368719219,"score_spread":0.27145451823508576,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2766320271","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9919413,0.00014547857,0.000056927034,0.007329029,0.00016443215,0.00015953365,0.0000022835225,0.0000022255945,0.0001987899],"genre_scores_gemma":[0.9875476,0.00009033629,0.011031551,0.0009160355,0.00015068022,0.0000032655867,0.000005447803,0.0000070274978,0.00024810442],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987822,0.00002579548,0.00081759127,0.000109715766,0.00015694399,0.00010771831],"domain_scores_gemma":[0.9987473,0.00012565735,0.00069356087,0.000098724326,0.00015477215,0.00017996745],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009284252,0.00007252627,0.00036799474,0.000065286906,0.00011163228,0.000033696833,0.00006914518,0.00009507151,0.000007932945],"category_scores_gemma":[0.0012506056,0.00005624523,0.0000861141,0.000022482189,0.00011825596,0.00017396802,0.000016600183,0.00015138129,0.00000219226],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00054236694,0.00022963958,0.9665546,0.000069477916,0.00020261151,0.0001614552,0.0006148117,0.0000010612031,0.000961898,0.00014569842,0.0033245587,0.027191818],"study_design_scores_gemma":[0.006399441,0.0004801021,0.9811159,0.00034478365,0.000106094696,0.000055187957,0.00005170547,0.00014022095,0.002104938,0.0034783417,0.0056497585,0.00007354266],"about_ca_topic_score_codex":0.000058663696,"about_ca_topic_score_gemma":0.00018338404,"teacher_disagreement_score":0.027118275,"about_ca_system_score_codex":0.000034039633,"about_ca_system_score_gemma":0.00032943022,"threshold_uncertainty_score":0.2293614},"labels":[],"label_agreement":null},{"id":"W2767047321","doi":"10.1172/jci77398","title":"Astrocyte-derived lipoxins A4 and B4 promote neuroprotection from acute and chronic injury","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Glaucoma and retinal disorders","field":"Medicine","cited_by":97,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto","funders":"National Eye Institute; Natural Sciences and Engineering Research Council of Canada; Glaucoma Research Foundation; Canadian Institutes of Health Research; National Institutes of Health; University of Toronto; Glaucoma Research Society of Canada","keywords":"Neuroprotection; Astrocyte; Lipoxin; Lipid signaling; Neuroscience; Inflammation; Neurotrophic factors; Signal transduction; Pharmacology; Biology; Medicine; Cell biology; Immunology; Central nervous system; Receptor; Biochemistry","score_opus":0.042253493425841296,"score_gpt":0.36120923729508303,"score_spread":0.31895574386924175,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2767047321","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9915231,0.00023250734,0.00022965849,0.007315515,0.00043152628,0.00018945597,0.0000031930615,0.00001038875,0.00006469228],"genre_scores_gemma":[0.995701,0.00090105,0.0021298903,0.00034916043,0.0008362949,0.0000014968373,0.000003668444,0.000013110119,0.000064288826],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986757,0.00010847235,0.0007222824,0.00016556244,0.00021837435,0.00010958931],"domain_scores_gemma":[0.99827003,0.000081252285,0.0010080801,0.00018814375,0.00015475751,0.00029771824],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005553978,0.00010756133,0.00039525476,0.000058034693,0.0001794375,0.000079595055,0.00007341719,0.00015394113,0.000012319813],"category_scores_gemma":[0.0014233933,0.000079654485,0.000105754145,0.000029373537,0.0004290245,0.0002927827,0.000048647507,0.0005878953,0.0000039625847],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016381686,0.00014328693,0.48948172,0.00010751499,0.00034957813,0.00011712798,0.00023394037,8.00189e-7,0.3787295,0.000050290022,0.00060312485,0.12854494],"study_design_scores_gemma":[0.0021708326,0.0027867893,0.98019505,0.0003400065,0.00032027956,0.00012595727,0.000021577769,0.00078795245,0.010118911,0.001959866,0.001095868,0.00007693089],"about_ca_topic_score_codex":0.00003820384,"about_ca_topic_score_gemma":0.00001647156,"teacher_disagreement_score":0.4907133,"about_ca_system_score_codex":0.000018953991,"about_ca_system_score_gemma":0.00016468982,"threshold_uncertainty_score":0.32482156},"labels":[],"label_agreement":null},{"id":"W2771211195","doi":"10.1172/jci95946","title":"Shifts in podocyte histone H3K27me3 regulate mouse and human glomerular disease","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Renal Diseases and Glomerulopathies","field":"Medicine","cited_by":125,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; St. Michael's Hospital","funders":"Canadian Institutes of Health Research; Kidney Foundation of Canada; Banting and Best Diabetes Centre, University of Toronto; Heart and Stroke Foundation of Canada; Diabetes Canada; AstraZeneca","keywords":"Podocyte; Histone; EZH2; Biology; Cancer research; Nephropathy; Cell biology; Glomerulonephritis; Endocrinology; Internal medicine; Kidney; Diabetes mellitus; Medicine; Biochemistry; Proteinuria","score_opus":0.07856003678865847,"score_gpt":0.4185935177595822,"score_spread":0.34003348097092373,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2771211195","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99207973,0.0012761912,0.000011256772,0.0061244876,0.00020198297,0.00012942296,0.000004296512,0.00000780798,0.00016481537],"genre_scores_gemma":[0.99733454,0.0006845178,0.0003932357,0.00063466176,0.0004904173,0.0000015467539,0.0000065710215,0.000014223637,0.00044029302],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99795634,0.00013393513,0.0012171401,0.00017846971,0.00036752748,0.00014660196],"domain_scores_gemma":[0.9974545,0.0001003926,0.0011137652,0.00036988582,0.00018320633,0.00077824754],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012738388,0.0001227933,0.0005348562,0.0001348645,0.00014843061,0.000072892384,0.00012724253,0.00010219404,0.000020737927],"category_scores_gemma":[0.0033169508,0.000095831245,0.00021616308,0.000050814382,0.0005498129,0.00041736875,0.000052582243,0.00038945023,0.0000053231597],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008820699,0.00023036833,0.98907214,0.00019169503,0.00005569904,0.00047610977,0.00007869561,0.000015248379,0.0031469502,0.0010844553,0.0005859657,0.0041806037],"study_design_scores_gemma":[0.0025784213,0.00039468257,0.98542804,0.00066913257,0.00015816883,0.0000147336195,0.000016467537,0.00014846714,0.0002517247,0.009504206,0.00073996343,0.000096006945],"about_ca_topic_score_codex":0.000046549063,"about_ca_topic_score_gemma":0.000013890447,"teacher_disagreement_score":0.00841975,"about_ca_system_score_codex":0.00003967702,"about_ca_system_score_gemma":0.00019914555,"threshold_uncertainty_score":0.39709395},"labels":[],"label_agreement":null},{"id":"W2772059359","doi":"10.1172/jci97233","title":"Discovery, characterization, and clinical development of the glucagon-like peptides","year":2017,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Diabetes Treatment and Management","field":"Medicine","cited_by":399,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canada Research Chairs","keywords":"Glucagon-like peptide-2; Translational science; Short bowel syndrome; Relevance (law); Computational biology; Medicine; Data science; Bioinformatics; Biology; Computer science; Internal medicine; Political science; Pathology; Biochemistry; Peptide","score_opus":0.2527332337757946,"score_gpt":0.4628754719202606,"score_spread":0.21014223814446598,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2772059359","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07978496,0.9125865,0.0002541597,0.0010771379,0.0043226546,0.0016166031,0.00001536308,0.000012909592,0.00032972769],"genre_scores_gemma":[0.00061310333,0.993948,0.001902768,0.00022670308,0.0007771305,0.0000067837645,0.00006484203,0.000024979414,0.0024357068],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99492526,0.0003422398,0.0039645396,0.00021886079,0.00042406793,0.0001250523],"domain_scores_gemma":[0.9922528,0.0005017747,0.006379417,0.00042266093,0.00025122816,0.00019211229],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029863722,0.00023614985,0.0022696655,0.00010936317,0.00009776572,0.000073470415,0.00028244834,0.00029359446,0.0000052973774],"category_scores_gemma":[0.0021402477,0.00012508084,0.00089751673,0.000092586466,0.00045280397,0.00028137988,0.00016540698,0.00053689326,0.0000062347453],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022657887,0.00020480783,0.018379396,0.0028704621,0.0010152232,0.0000052213695,0.00003308534,2.106242e-8,0.0000014650924,0.00007038649,0.00048250082,0.97691476],"study_design_scores_gemma":[0.00085283926,0.00029872585,0.113932915,0.01906028,0.003584321,0.0000141012515,0.000005734617,0.0000031295504,0.0000072799703,0.000071672366,0.86206174,0.000107236214],"about_ca_topic_score_codex":8.326673e-7,"about_ca_topic_score_gemma":0.00000251673,"teacher_disagreement_score":0.97680753,"about_ca_system_score_codex":0.000047857666,"about_ca_system_score_gemma":0.001315657,"threshold_uncertainty_score":0.51006484},"labels":[],"label_agreement":null},{"id":"W2784540562","doi":"10.1172/jci97555","title":"Latent HIV reservoirs exhibit inherent resistance to elimination by CD8+ T cells","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":191,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Maple Leaf Medical Clinic","funders":"National Institute of Allergy and Infectious Diseases; National Institute on Drug Abuse; National Heart, Lung, and Blood Institute; National Institute on Aging; Center for AIDS Research, University of Washington; University of Toronto; George Washington University; National Cancer Institute; National Institutes of Health; National Institute of Mental Health; amfAR, The Foundation for AIDS Research","keywords":"Cytotoxic T cell; CD8; Immunology; Biology; Immune system; Latency (audio); Virus latency; Virology; Virus; Effector; Viral replication; In vitro; Genetics; Computer science","score_opus":0.07475016359552437,"score_gpt":0.3684097136453358,"score_spread":0.2936595500498114,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2784540562","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9856891,0.0004499594,0.000506525,0.011551969,0.00083865924,0.00021419872,0.000032980406,0.000012759837,0.0007038481],"genre_scores_gemma":[0.9910461,0.00013124131,0.0013337153,0.0005985787,0.0002665996,0.0000066580474,0.000056943132,0.000009038968,0.006551157],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977805,0.00054644997,0.0010905983,0.00019056501,0.0001500595,0.00024180854],"domain_scores_gemma":[0.9981241,0.00039853813,0.00053428777,0.00018967819,0.00057657773,0.00017681684],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0017150394,0.00011163384,0.00030862496,0.00011043807,0.000120574885,0.000025819982,0.00021212208,0.0001985455,0.0003157849],"category_scores_gemma":[0.0012443016,0.000084520485,0.00013098716,0.00017029778,0.0003291725,0.00016143917,0.000048142458,0.0004009918,0.0017913046],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009940562,0.00034834995,0.012223869,0.000015936745,0.00018643336,0.000013885465,0.00039939446,0.000007837756,0.25067356,0.00025423308,0.72806823,0.0068142377],"study_design_scores_gemma":[0.0036838958,0.003231233,0.058619138,0.0002791178,0.000079859215,0.00001529537,0.000101838916,0.000010043505,0.5446322,0.0018386332,0.38730893,0.00019982891],"about_ca_topic_score_codex":0.000010081279,"about_ca_topic_score_gemma":0.000052388354,"teacher_disagreement_score":0.34075928,"about_ca_system_score_codex":0.000077069206,"about_ca_system_score_gemma":0.00016883411,"threshold_uncertainty_score":0.9989859},"labels":[],"label_agreement":null},{"id":"W2784831101","doi":"10.1172/jci94840","title":"COP1/DET1/ETS axis regulates ERK transcriptome and sensitivity to MAPK inhibitors","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Melanoma and MAPK Pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"York University; U.S. Department of Defense; University of Minnesota; Geoffrey Beene Cancer Research Center; Gerstner Family Foundation; Memorial Sloan-Kettering Cancer Center; National Cancer Institute; Office of Defense Programs; Cancer Research UK; GIST Cancer Research Fund; Prostate Cancer Foundation","keywords":"Transcriptome; MAPK/ERK pathway; Sensitivity (control systems); Cell biology; Biology; Genetics; Signal transduction; Gene; Gene expression; Engineering","score_opus":0.04126453199566905,"score_gpt":0.3278556770233905,"score_spread":0.2865911450277215,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2784831101","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966433,0.00010457071,0.00081153616,0.0013509183,0.0007993194,0.00009130708,0.0000058512624,0.000004939129,0.00018824574],"genre_scores_gemma":[0.9931099,0.00004922253,0.0031527348,0.0013413172,0.0021810576,9.167484e-7,0.000008052372,0.0000113200085,0.0001454743],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99854845,0.00022780916,0.0007210456,0.00019584953,0.00017023197,0.00013662364],"domain_scores_gemma":[0.99882436,0.00007364814,0.00031922458,0.00015149912,0.0002980025,0.00033327684],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015478027,0.00010867112,0.0002605251,0.000053821543,0.000059624206,0.000026405605,0.00005831558,0.00020542565,0.000008353116],"category_scores_gemma":[0.0010810682,0.0000909958,0.000119721684,0.000080585145,0.00025596283,0.000013502954,0.000035887395,0.00015484211,0.000010335731],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020781082,0.000038362057,0.017297078,0.000013980987,0.000042993015,0.0000129092805,0.00013307897,0.0000036577173,0.9678768,0.000076659475,0.008948056,0.0053486447],"study_design_scores_gemma":[0.0008906491,0.002760699,0.16097738,0.000093909424,0.00004751014,0.00014699015,0.000043112796,0.0000793077,0.80487114,0.0012710866,0.028639544,0.00017869275],"about_ca_topic_score_codex":0.0000069231,"about_ca_topic_score_gemma":0.000029139055,"teacher_disagreement_score":0.16300565,"about_ca_system_score_codex":0.0000065020076,"about_ca_system_score_gemma":0.00010736333,"threshold_uncertainty_score":0.37107012},"labels":[],"label_agreement":null},{"id":"W2785195392","doi":"10.1172/jci97650","title":"iRhom2 promotes lupus nephritis through TNF-α and EGFR signaling","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cytokine Signaling Pathways and Interactions","field":"Medicine","cited_by":97,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network","funders":"National Institute of General Medical Sciences; Weill Cornell Medical College; Hospital for Special Surgery; Lupus Research Alliance; National Institutes of Health; Lupus Research Institute; Universiteit van Amsterdam; Amgen","keywords":"Lupus nephritis; Kidney; Cancer research; Tumor necrosis factor alpha; Pathogenesis; Signal transduction; Kidney disease; Biology; Immunology; Internal medicine; Endocrinology; Medicine; Cell biology; Disease","score_opus":0.11955520764629732,"score_gpt":0.40362877501758393,"score_spread":0.28407356737128664,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2785195392","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9902416,0.00025864854,0.0016344299,0.00549688,0.0013182337,0.00011766441,0.0000023198832,0.000019248766,0.0009110125],"genre_scores_gemma":[0.9729732,0.00014434675,0.020805959,0.0022660918,0.0036549657,0.0000013035781,0.000004136512,0.000015774413,0.00013419217],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99805576,0.00011762504,0.001258562,0.00015163967,0.00028399064,0.00013245383],"domain_scores_gemma":[0.9978083,0.00044776886,0.0007144908,0.00012093325,0.0006600954,0.00024841801],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010566533,0.00010724907,0.0004269404,0.00007907757,0.00010187647,0.00004911958,0.00006023455,0.00013628732,0.00017360122],"category_scores_gemma":[0.0027975927,0.00008268386,0.00018323552,0.00015028975,0.00038111638,0.00038942078,0.000022968055,0.00051202986,0.000020046586],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015553914,0.00088512705,0.3064915,0.00029211462,0.00074301544,0.00025309093,0.004532594,0.000019262081,0.54255515,0.0058098417,0.0497122,0.08715074],"study_design_scores_gemma":[0.013518924,0.023135547,0.17220297,0.006589223,0.001494579,0.008694629,0.0012075817,0.004580741,0.5082741,0.0867683,0.17273524,0.00079817505],"about_ca_topic_score_codex":0.00001878604,"about_ca_topic_score_gemma":0.0000058921655,"teacher_disagreement_score":0.13428853,"about_ca_system_score_codex":0.00002504492,"about_ca_system_score_gemma":0.00020483402,"threshold_uncertainty_score":0.33717498},"labels":[],"label_agreement":null},{"id":"W2786220274","doi":"10.1172/jci94956","title":"Ribonuclease inhibitor 1 regulates erythropoiesis by controlling GATA1 translation","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer","funders":"Inselspital, Universitätsspital Bern; Université de Lausanne; University of Bern; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; National Science Foundation","keywords":"GATA1; Erythropoiesis; Biology; Messenger RNA; Translation (biology); Molecular biology; Polysome; Gene knockdown; Cell biology; Protein biosynthesis; Ribosome; Gene; RNA; Stem cell; Haematopoiesis; Genetics; Internal medicine; Anemia; Medicine","score_opus":0.050911035982981204,"score_gpt":0.3522489635023838,"score_spread":0.30133792751940264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2786220274","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9898595,0.0008777093,0.00641431,0.0020908855,0.0004907603,0.00007892342,0.000010541773,0.000004806853,0.00017252324],"genre_scores_gemma":[0.9929273,0.00033254252,0.003612726,0.00064409984,0.002278453,0.000002048322,0.00003471799,0.000013270979,0.00015480907],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985172,0.00014450507,0.0009055744,0.0001549458,0.00017425511,0.00010353202],"domain_scores_gemma":[0.99854964,0.0000597746,0.00063818303,0.00016560055,0.00043692844,0.00014988988],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009548254,0.00008725397,0.00019873635,0.0000348354,0.000084725885,0.000033707416,0.000114569506,0.00016942245,0.000034874258],"category_scores_gemma":[0.00055263034,0.0000740274,0.0001602028,0.00008363341,0.00033194578,0.00002176263,0.000010141553,0.00012881032,0.000008845703],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004796925,0.000112095506,0.0062515875,0.000010992178,0.000115796145,9.4291266e-7,0.00007802847,0.000058357906,0.89952165,0.00009937245,0.056569498,0.036702015],"study_design_scores_gemma":[0.004430803,0.0026647027,0.01632641,0.00013669778,0.00020384445,0.000027632748,0.00014483041,0.0028495204,0.74996805,0.003260121,0.21961704,0.00037035206],"about_ca_topic_score_codex":0.0000053060503,"about_ca_topic_score_gemma":0.0000061832516,"teacher_disagreement_score":0.16304754,"about_ca_system_score_codex":0.000009952215,"about_ca_system_score_gemma":0.000130927,"threshold_uncertainty_score":0.30187497},"labels":[],"label_agreement":null},{"id":"W2788105677","doi":"10.1172/jci98463","title":"Killer cell immunoglobulin–like receptor 3DL1 variation modifies HLA-B*57 protection against HIV-1","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"AIDS Vancouver; Simon Fraser University","funders":"National Center for Advancing Translational Sciences; National Center for Research Resources; National Cancer Institute; University of California, Los Angeles; National Institutes of Health; Michael Smith Health Research BC; National Institute of Allergy and Infectious Diseases; University of Pittsburgh; Johns Hopkins Bloomberg School of Public Health; Wellcome Trust; Northwestern University","keywords":"Allotype; CD8; HLA-B Antigens; Antibody; Biology; Immunology; Receptor; HLA-B; Immunoglobulin domain; B cell; Human leukocyte antigen; Immune system; Genetics; Antigen","score_opus":0.050959640177995806,"score_gpt":0.30466449684222924,"score_spread":0.2537048566642334,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2788105677","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94043994,0.00060450187,0.012521529,0.0033596978,0.039807636,0.00037581476,0.0000033289832,0.00007933055,0.002808225],"genre_scores_gemma":[0.9835842,0.0003996274,0.0009427148,0.0013429988,0.0013621275,0.000009316442,0.00008592602,0.000025422974,0.012247611],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9966987,0.000798821,0.001905662,0.0002463692,0.00012642432,0.00022403357],"domain_scores_gemma":[0.9966759,0.00025596484,0.0019007075,0.00024441694,0.00085885875,0.000064154905],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0018908433,0.00019620091,0.00043594438,0.00021002018,0.00027690234,0.0000535884,0.00019758647,0.0005424483,0.00093224115],"category_scores_gemma":[0.0010922545,0.00016526908,0.00030604456,0.00022568816,0.00036927967,0.0006784811,0.000053476186,0.0009703241,0.0024390921],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017548935,0.00038486166,0.0016022144,0.000027932632,0.00025670987,0.0000013826066,0.0009321205,0.00007924563,0.811204,0.00022549089,0.16786781,0.015663298],"study_design_scores_gemma":[0.0053491453,0.0031702656,0.026109738,0.0002709854,0.00017921648,0.0000875493,0.00041024352,0.00061474304,0.30453837,0.0015260581,0.65729105,0.0004526301],"about_ca_topic_score_codex":0.000026582607,"about_ca_topic_score_gemma":0.0000028521988,"teacher_disagreement_score":0.50666565,"about_ca_system_score_codex":0.000099871606,"about_ca_system_score_gemma":0.00020291413,"threshold_uncertainty_score":0.99998105},"labels":[],"label_agreement":null},{"id":"W2788525877","doi":"10.1172/jci95873","title":"Pharmacological targeting of MYC-regulated IRE1/XBP1 pathway suppresses MYC-driven breast cancer","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Endoplasmic Reticulum Stress and Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":260,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sinai Health System; Lunenfeld-Tanenbaum Research Institute; University of Toronto","funders":"National Center for Research Resources; National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Allergy and Infectious Diseases; National Cancer Institute; Yale University; National Institutes of Health; Cancer Prevention and Research Institute of Texas; Susan G. Komen for the Cure","keywords":"XBP1; Biology; Unfolded protein response; Cancer research; Gene silencing; Transcription factor; Downregulation and upregulation; Cell biology; Endoplasmic reticulum; Genetics; Gene; RNA; RNA splicing","score_opus":0.03718933592934251,"score_gpt":0.3676113315034202,"score_spread":0.3304219955740777,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2788525877","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978177,0.00041375155,0.00013453212,0.0007688655,0.0005866177,0.00008164598,0.00005458997,0.000005306997,0.00013697208],"genre_scores_gemma":[0.99602073,0.00046320725,0.0010500773,0.0004606951,0.0019153915,0.0000031193008,0.000029385608,0.000012560742,0.000044841923],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998016,0.00024878242,0.0011188359,0.00020035678,0.00024706384,0.000168988],"domain_scores_gemma":[0.9977869,0.00009461364,0.0010060172,0.0001196119,0.0007038335,0.00028906605],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054981676,0.00013022537,0.00033326485,0.00003732008,0.000055258588,0.00001724632,0.00020787556,0.00020630627,0.0001944666],"category_scores_gemma":[0.00085320725,0.00009694148,0.0002396634,0.00009414109,0.00052311225,0.000017000191,0.00007051442,0.0001934324,0.0000033652386],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00062917353,0.00021702799,0.14284112,0.000037739657,0.00019882037,0.000012649022,0.00004087166,0.00029987586,0.8417277,0.00005219308,0.010729767,0.0032131053],"study_design_scores_gemma":[0.0022422713,0.0009849945,0.130397,0.0001790247,0.0002059771,0.000038300124,0.00005634315,0.0016773284,0.86067903,0.00043144057,0.002898068,0.00021022893],"about_ca_topic_score_codex":0.000012583144,"about_ca_topic_score_gemma":0.0000044235276,"teacher_disagreement_score":0.018951362,"about_ca_system_score_codex":0.000009561776,"about_ca_system_score_gemma":0.00030061824,"threshold_uncertainty_score":0.3953159},"labels":[],"label_agreement":null},{"id":"W2788648365","doi":"10.1172/jci98589","title":"Mosaic RAS/MAPK variants cause sporadic vascular malformations which respond to targeted therapy","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Vascular Malformations Diagnosis and Treatment","field":"Medicine","cited_by":286,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"National Human Genome Research Institute; National Institutes of Health; Brain Tumour Charity; National Institute for Health and Care Research; Melanoma Research Alliance; Wellcome Trust; Medical Research Council; Wellcome","keywords":"Zebrafish; Neuroblastoma RAS viral oncogene homolog; KRAS; Medicine; Cancer research; Trametinib; Pathogenesis; Targeted therapy; Biology; Cancer; Bioinformatics; Mutation; Genetics; MAPK/ERK pathway; Pathology; Gene; Signal transduction","score_opus":0.09992566510296441,"score_gpt":0.3928731058384804,"score_spread":0.292947440735516,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2788648365","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98861295,0.00031045245,0.001526155,0.008118686,0.0006871547,0.000488267,0.000010133033,0.000026148069,0.00022007574],"genre_scores_gemma":[0.9802301,0.0006739895,0.013896656,0.0040042526,0.0010060745,0.000015295089,0.000063040585,0.00002359888,0.00008700833],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9968533,0.00029360835,0.0018210006,0.00017794802,0.0006408874,0.00021326987],"domain_scores_gemma":[0.9965293,0.00027117872,0.00077743724,0.0004142595,0.001416188,0.0005916464],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026905206,0.00017239695,0.00057641766,0.0003622179,0.00015659154,0.00005663073,0.00014520616,0.00018617319,0.0002726707],"category_scores_gemma":[0.002817703,0.0001259164,0.00035210056,0.0007932056,0.00012204707,0.00054607855,0.000024449864,0.0003589235,0.00027040706],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0032548988,0.0053550685,0.75105464,0.00017226051,0.0066011213,0.00025916102,0.008481408,0.0009198323,0.0060558417,0.004628084,0.15208814,0.061129536],"study_design_scores_gemma":[0.0052430383,0.003107706,0.9631047,0.0003121234,0.00041889478,0.00014086634,0.00011457713,0.0011324662,0.003695805,0.0011820872,0.021387318,0.0001603927],"about_ca_topic_score_codex":0.000020379082,"about_ca_topic_score_gemma":0.000017320788,"teacher_disagreement_score":0.21205008,"about_ca_system_score_codex":0.00009175727,"about_ca_system_score_gemma":0.0005722265,"threshold_uncertainty_score":0.51347214},"labels":[],"label_agreement":null},{"id":"W2790767158","doi":"10.1172/jci97837","title":"Role of proNGF/p75 signaling in bladder dysfunction after spinal cord injury","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Urinary Bladder and Prostate Research","field":"Medicine","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Neurological Disorders and Stroke; National Institute of Diabetes and Digestive and Kidney Diseases; NIH Office of the Director; Alzheimer's Drug Discovery Foundation","keywords":"Spinal cord injury; Medicine; Urothelium; Urinary bladder; Nerve growth factor; Urination; Hyperplasia; Spinal cord; Resiniferatoxin; Tyrosine hydroxylase; Urology; Internal medicine; Urinary system; Endocrinology; Pathology; Immunohistochemistry; TRPV1; Receptor","score_opus":0.09431700928332773,"score_gpt":0.43585058749597916,"score_spread":0.3415335782126514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2790767158","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99762934,0.00025444152,0.00010362322,0.0010146322,0.00024846027,0.00020615627,0.000001725958,0.000006334292,0.00053525966],"genre_scores_gemma":[0.9959306,0.00008171797,0.0022640163,0.0003263171,0.0012466392,0.000004215999,0.0000031349434,0.000013002048,0.00013034334],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974046,0.00025709032,0.0014947064,0.0001453143,0.0005234162,0.00017489716],"domain_scores_gemma":[0.9981701,0.00016519464,0.0005642529,0.00014104572,0.00071545097,0.0002439686],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0027007498,0.000096152144,0.000418912,0.00025244086,0.000025321628,0.000014039466,0.00007863533,0.00016008454,0.0002547394],"category_scores_gemma":[0.0011167675,0.00007476471,0.00015539836,0.0003065386,0.0003780534,0.00027183958,0.00003022749,0.0006474316,0.000022931037],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.048836607,0.00069091126,0.728998,0.00019674934,0.00018295573,0.00007329012,0.00041515715,0.000007029456,0.09135288,0.00008057242,0.001152254,0.12801358],"study_design_scores_gemma":[0.0027258114,0.03776295,0.8960389,0.0009141901,0.0001378935,0.000110672256,0.00025676237,0.0005819382,0.05120269,0.007890397,0.002251309,0.00012649255],"about_ca_topic_score_codex":0.000017177746,"about_ca_topic_score_gemma":0.000007946085,"teacher_disagreement_score":0.16704088,"about_ca_system_score_codex":0.00003806714,"about_ca_system_score_gemma":0.0004845477,"threshold_uncertainty_score":0.30488163},"labels":[],"label_agreement":null},{"id":"W2792335811","doi":"10.1172/jci96174","title":"LILRB1 polymorphisms influence posttransplant HCMV susceptibility and ligand interactions","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Universitätsspital Zürich; Canadian Institutes of Health Research; China Scholarship Council; Inselspital, Universitätsspital Bern; Swiss Transplant Cohort Study; University of Alberta; Universitätsspital Basel; Centre Hospitalier Universitaire Vaudois; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; National Science Foundation","keywords":"Biology; Major histocompatibility complex; Nonsynonymous substitution; Human leukocyte antigen; Mutation; Gene; Genetics; Antigen","score_opus":0.0503997508516832,"score_gpt":0.3453212717236818,"score_spread":0.29492152087199863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2792335811","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9916487,0.00020396772,0.00033738726,0.0016997439,0.005632041,0.00007346819,0.0000020845735,0.000014980315,0.0003876648],"genre_scores_gemma":[0.99688756,0.0001064109,0.0002362124,0.0011635264,0.0003378508,8.5804504e-7,0.000010199862,0.000007155661,0.001250243],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99778134,0.00042089226,0.001434994,0.00017042634,0.000060667633,0.00013168389],"domain_scores_gemma":[0.9977527,0.0005510732,0.0009038266,0.00016501787,0.00056044257,0.00006692435],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015236089,0.000112043825,0.00032784606,0.00009366718,0.00015333925,0.000032530083,0.00011225667,0.00019031267,0.00044155773],"category_scores_gemma":[0.0015043505,0.00008697025,0.00014750843,0.000105358005,0.0006606229,0.000532879,0.000023697412,0.000660458,0.00025114493],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008213662,0.00013678208,0.14855064,0.000009481496,0.00014159693,0.0000031368018,0.00047844552,0.00000285524,0.8357991,0.00032213275,0.009671863,0.004062617],"study_design_scores_gemma":[0.0016852695,0.0020154382,0.6967521,0.00019251999,0.00012641435,0.000655588,0.00018679003,0.00004048218,0.25037155,0.0011569606,0.046649266,0.00016765133],"about_ca_topic_score_codex":0.000047570986,"about_ca_topic_score_gemma":0.000033697565,"teacher_disagreement_score":0.5854275,"about_ca_system_score_codex":0.000026357357,"about_ca_system_score_gemma":0.00011234124,"threshold_uncertainty_score":0.48347476},"labels":[],"label_agreement":null},{"id":"W2793556683","doi":"10.1172/jci95127","title":"The anti-caspase inhibitor Q-VD-OPH prevents AIDS disease progression in SIV-infected rhesus macaques","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier de l'Université Laval","funders":"National Institutes of Health; Canadian Institutes of Health Research; Agence Nationale de Recherches sur le Sida et les Hépatites Virales","keywords":"Simian immunodeficiency virus; CD8; Apoptosis; Immunology; Cytotoxic T cell; T cell; Immune system; Viral load; Programmed cell death; Virology; Biology; Virus; In vitro","score_opus":0.05593114888946106,"score_gpt":0.40678314281926753,"score_spread":0.3508519939298065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2793556683","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960825,0.0010246382,0.00001898252,0.001640426,0.00085055205,0.00027363058,0.000011630082,0.0000132741525,0.00008436526],"genre_scores_gemma":[0.99857974,0.00038282896,0.00021496337,0.00012587372,0.00039758245,0.000010963038,0.00003613572,0.000009552443,0.00024237098],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99709094,0.0012164515,0.0011088325,0.00016975008,0.00013566068,0.00027839537],"domain_scores_gemma":[0.99786496,0.0008468628,0.00061525597,0.00019451664,0.00029599274,0.00018242447],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017769543,0.00012343693,0.00030228472,0.00010529962,0.00020367751,0.00003798763,0.00019741865,0.00017820559,0.0000721062],"category_scores_gemma":[0.004066938,0.0000702533,0.00016067851,0.00018756572,0.00079683337,0.00020102096,0.000064367414,0.00057846884,0.00025971018],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023035118,0.0010109426,0.86779577,0.00002593292,0.00026981358,0.00014185066,0.00020886213,0.0000027714236,0.029341914,0.00021885025,0.009646887,0.089032896],"study_design_scores_gemma":[0.005301782,0.003259608,0.94308305,0.00054678664,0.000084276675,0.00003517268,0.000050534356,0.000031233576,0.031562023,0.0034419273,0.012466875,0.0001367557],"about_ca_topic_score_codex":0.0000108102095,"about_ca_topic_score_gemma":0.000019984198,"teacher_disagreement_score":0.08889614,"about_ca_system_score_codex":0.000047236645,"about_ca_system_score_gemma":0.00041488913,"threshold_uncertainty_score":0.48687983},"labels":[],"label_agreement":null},{"id":"W2796425507","doi":"10.1172/jci97098","title":"Humanized mouse model of Rasmussen’s encephalitis supports the immune-mediated hypothesis","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Multiple Sclerosis Research Studies","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; Centre Hospitalier Universitaire Sainte-Justine; Centre Hospitalier Universitaire de Sherbrooke; Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Astrogliosis; Hemispherectomy; Medicine; Immunology; Immune system; Humanized mouse; Multiple sclerosis; Encephalitis; Epilepsy; Pathology; Central nervous system; Internal medicine","score_opus":0.2255524104533053,"score_gpt":0.4156244015959532,"score_spread":0.19007199114264792,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2796425507","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9928838,0.0001148173,0.00027100267,0.005856583,0.00021018802,0.00026686248,0.00001203705,0.0000128848305,0.00037185184],"genre_scores_gemma":[0.9917126,0.00088598405,0.0053835823,0.00071450986,0.0007405462,0.0000055493992,0.0000042170705,0.000018468541,0.00053452566],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9961104,0.00041727084,0.0022081514,0.00015288846,0.0008949551,0.00021635601],"domain_scores_gemma":[0.9938062,0.0024084672,0.0015003302,0.0003535885,0.0016441518,0.00028727745],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0044184127,0.00013007034,0.00074212794,0.00013193845,0.00011027513,0.000019060526,0.00023652696,0.00013910033,0.00015469974],"category_scores_gemma":[0.026561921,0.00007639511,0.00035906705,0.00020076227,0.0014516367,0.00018901068,0.00007254885,0.0005194366,0.000020774762],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023261306,0.00086384907,0.185158,0.00022227755,0.001243989,0.000022998853,0.003582878,0.000110313435,0.76483554,0.00046340728,0.0198453,0.02132532],"study_design_scores_gemma":[0.007898628,0.002718168,0.73130256,0.00062080746,0.00043912505,0.000035431676,0.0007076557,0.025132,0.22611165,0.0040006074,0.0007992154,0.00023413527],"about_ca_topic_score_codex":0.000032304793,"about_ca_topic_score_gemma":0.000015672878,"teacher_disagreement_score":0.5461446,"about_ca_system_score_codex":0.000044486045,"about_ca_system_score_gemma":0.00050996843,"threshold_uncertainty_score":0.9816378},"labels":[],"label_agreement":null},{"id":"W2796581040","doi":"10.1172/jci98814","title":"JAK1/2 inhibition with baricitinib in the treatment of autoinflammatory interferonopathies","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":521,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Izaak Walton Killam Health Centre","funders":"National Institute of Allergy and Infectious Diseases; Rosetrees Trust; National Institute of Arthritis and Musculoskeletal and Skin Diseases; Eli Lilly and Company","keywords":"Medicine; Internal medicine","score_opus":0.05548603744449432,"score_gpt":0.34178881645158027,"score_spread":0.28630277900708595,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2796581040","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99770236,0.00044037367,0.0001024099,0.0007861054,0.00045129965,0.00010680943,0.00000174232,0.000004618241,0.00040428064],"genre_scores_gemma":[0.9991773,0.00014345057,0.00014894053,0.0002324755,0.00013955963,0.000003146053,0.000004628928,0.000005425001,0.00014510598],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978509,0.0008026135,0.0011024826,0.00008290366,0.000054509423,0.00010661321],"domain_scores_gemma":[0.9982462,0.00063828524,0.00074476795,0.00013159966,0.00022370639,0.000015438425],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012890395,0.00009261661,0.00033458002,0.00013010102,0.00004364546,0.000009592588,0.00010839602,0.00013959577,0.0000872086],"category_scores_gemma":[0.00039057524,0.00004890482,0.000112768575,0.000109123095,0.0007941785,0.00013245767,0.000008070978,0.00023094,0.000035589535],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.024816891,0.0036926207,0.19864999,0.000085995714,0.0009841304,0.00010597069,0.038195565,0.000025597417,0.59978807,0.007179757,0.007146427,0.119328976],"study_design_scores_gemma":[0.0059234286,0.031016115,0.31115967,0.000537129,0.000120839555,0.00033040647,0.0022135882,0.000017614899,0.62415814,0.001109726,0.023268014,0.00014534622],"about_ca_topic_score_codex":0.000017174407,"about_ca_topic_score_gemma":0.000033869568,"teacher_disagreement_score":0.11918362,"about_ca_system_score_codex":0.000028622593,"about_ca_system_score_gemma":0.0001620392,"threshold_uncertainty_score":0.2926184},"labels":[],"label_agreement":null},{"id":"W2797791176","doi":"10.1172/jci95305","title":"CNS myeloid cells critically regulate heat hyperalgesia","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Neuroinflammation and Neurodegeneration Mechanisms","field":"Neuroscience","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Fraunhofer-Institut für Zelltherapie und Immunologie; Department of Anesthesiology and Critical Care Medicine, Johns Hopkins Medicine; University of Toronto","keywords":"Myeloid cells; Myeloid; Hyperalgesia; Chemistry; Medicine; Neuroscience; Cell biology; Immunology; Biology; Biochemistry; Receptor; Nociception","score_opus":0.11526936522011824,"score_gpt":0.3669373391501598,"score_spread":0.2516679739300416,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2797791176","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98273325,0.0000062229446,0.0039533027,0.009514848,0.00278447,0.0001295063,0.0000024095707,0.00005003738,0.00082595623],"genre_scores_gemma":[0.971073,0.00009899236,0.005442358,0.020535715,0.0021168413,0.0000013811658,7.463887e-7,0.000023999528,0.00070700014],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9964345,0.00074589154,0.001723142,0.0002882316,0.0006032068,0.00020499615],"domain_scores_gemma":[0.99725676,0.00096635125,0.00052156474,0.0002494172,0.0005980622,0.00040786417],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014000478,0.00014260739,0.0003309724,0.00013684764,0.0001769738,0.000118791984,0.00029184757,0.00012954179,0.00022374371],"category_scores_gemma":[0.007904718,0.000119403674,0.0001984117,0.00027648357,0.00045137803,0.00055571226,0.000039127222,0.00042789674,0.00028282736],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000671979,0.000047357265,0.000100502846,0.0000066330476,0.0000027056399,0.000026992495,0.000048497146,0.00006294502,0.98497456,0.010267099,0.0032747756,0.0011207076],"study_design_scores_gemma":[0.00065374264,0.000749675,0.0014550425,0.000038401566,0.000020596553,0.000086873966,0.0000064190563,0.0042045857,0.97644895,0.010397444,0.005817995,0.000120298515],"about_ca_topic_score_codex":5.4920827e-7,"about_ca_topic_score_gemma":0.0000013537008,"teacher_disagreement_score":0.011660282,"about_ca_system_score_codex":0.00001645969,"about_ca_system_score_gemma":0.00019178008,"threshold_uncertainty_score":0.94632566},"labels":[],"label_agreement":null},{"id":"W2799869022","doi":"10.1172/jci95476","title":"Metreleptin-mediated improvements in insulin sensitivity are independent of food intake in humans with lipodystrophy","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Regulation of Appetite and Obesity","field":"Neuroscience","cited_by":98,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"IONICS Mass Spectrometry (Canada)","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; NIH Clinical Center; National Institutes of Health","keywords":"Lipodystrophy; Leptin; Endocrinology; Internal medicine; Insulin sensitivity; Insulin; Medicine; Insulin resistance; Food intake; Obesity; Immunology","score_opus":0.07157868493419671,"score_gpt":0.33112564345042655,"score_spread":0.25954695851622983,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2799869022","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99895746,0.000006901358,0.00016195665,0.00041030487,0.00020939473,0.0001577574,0.0000058185447,0.0000060659813,0.00008434214],"genre_scores_gemma":[0.9985584,0.000023097335,0.0006984234,0.00048109615,0.0002162956,0.0000010322372,0.0000015252697,0.000009411075,0.000010729609],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99691844,0.0005793301,0.0015456817,0.00022536518,0.0005766803,0.00015449815],"domain_scores_gemma":[0.99694353,0.0006799693,0.0017987621,0.00015818437,0.0002802721,0.00013927472],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021655627,0.00011560208,0.00044760332,0.00030539706,0.000032335083,0.000021097983,0.00014517778,0.00014270193,0.000015395564],"category_scores_gemma":[0.0037050946,0.000091557486,0.00008452089,0.0005833865,0.0004000394,0.00038508003,0.000041597075,0.00050390215,0.0000075607713],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043284683,0.00044647485,0.8608926,0.000024118035,0.000012377725,0.00004598884,0.0002971318,0.00018741917,0.13549148,0.00020730915,0.000028299315,0.001933998],"study_design_scores_gemma":[0.0019944129,0.0017610398,0.826315,0.00021754617,0.000008687563,0.0000054960933,0.000058821097,0.0006201899,0.16782059,0.0010835121,0.000037394715,0.00007733457],"about_ca_topic_score_codex":0.000036463018,"about_ca_topic_score_gemma":0.00080229196,"teacher_disagreement_score":0.034577586,"about_ca_system_score_codex":0.000051914754,"about_ca_system_score_gemma":0.00017141191,"threshold_uncertainty_score":0.4435612},"labels":[],"label_agreement":null},{"id":"W2805419050","doi":"10.1172/jci96640","title":"Renal immune surveillance and dipeptidase-1 contribute to contrast-induced acute kidney injury","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Acute Kidney Injury Research","field":"Medicine","cited_by":109,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; University of Calgary; Libin Cardiovascular Institute of Alberta","funders":"Canadian Institutes of Health Research; University of Calgary; Alberta Innovates; Alberta Health Services; European Commission; Alberta Innovates - Health Solutions","keywords":"Inflammasome; Acute kidney injury; Kidney; Dipeptidase; Inflammation; Medicine; Pathology; Reabsorption; Renal physiology; Internal medicine; Chemistry; Biochemistry","score_opus":0.06760623114428854,"score_gpt":0.4228463846779157,"score_spread":0.35524015353362715,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2805419050","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9536604,0.000033826633,0.000614872,0.044060603,0.0006993076,0.0004076021,0.0001388375,0.000022768856,0.00036172886],"genre_scores_gemma":[0.9826268,0.000109672335,0.0036266549,0.010592998,0.002564741,0.0000066568173,0.000036339407,0.000026679872,0.0004094578],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9962182,0.00044299534,0.0019636555,0.0002727531,0.000744732,0.00035763183],"domain_scores_gemma":[0.9941489,0.0005845512,0.0008904415,0.00033365126,0.0018068145,0.0022356058],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0050917887,0.0001870195,0.00094135513,0.00021819596,0.00010854624,0.000060254533,0.00020151601,0.00025778712,0.00013659659],"category_scores_gemma":[0.019853652,0.00014316525,0.00020777306,0.00038190364,0.00052755815,0.00028221935,0.00009786833,0.00090979924,0.00007655385],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006783042,0.0001987897,0.16717544,0.000043692682,0.00077487866,0.00014674783,0.00021083547,6.566921e-8,0.5371963,0.00020416669,0.2731053,0.014160787],"study_design_scores_gemma":[0.010955067,0.016363101,0.77803797,0.0008918115,0.00037133988,0.00054431363,0.000036176913,0.0004009922,0.14434114,0.0016056742,0.046095893,0.00035650207],"about_ca_topic_score_codex":0.000012232534,"about_ca_topic_score_gemma":0.0000023112405,"teacher_disagreement_score":0.61086255,"about_ca_system_score_codex":0.000070750095,"about_ca_system_score_gemma":0.0010505605,"threshold_uncertainty_score":0.98840255},"labels":[],"label_agreement":null},{"id":"W2806888518","doi":"10.1172/jci94003","title":"A review of current theories and treatments for phantom limb pain","year":2018,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Pain Management and Treatment","field":"Medicine","cited_by":181,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; Health Science Center, University of Tennessee; U.S. Department of Veterans Affairs","keywords":"Phantom limb; Phantom limb pain; Amputation; Phantom pain; Feeling; Dorsal root ganglion; Physical medicine and rehabilitation; Neuroscience; Medicine; Peripheral nervous system; Nervous system; Quality of life (healthcare); Central nervous system; Dorsum; Psychology; Surgery; Anatomy","score_opus":0.31920409113247605,"score_gpt":0.53292715202675,"score_spread":0.21372306089427395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2806888518","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000041297815,0.99744904,0.00037205877,0.00032425558,0.00039403595,0.0013358099,0.000013429458,0.0000053061513,0.000064740234],"genre_scores_gemma":[0.000006633061,0.9962951,0.0020976264,0.0004490681,0.00087742804,0.00003818181,0.00008613152,0.000019915493,0.00012992538],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9961134,0.00075464044,0.002569644,0.00018692912,0.00026130516,0.00011405142],"domain_scores_gemma":[0.9937911,0.0020591859,0.0033572887,0.00020379612,0.00038042403,0.0002082067],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.006677971,0.00023704581,0.002546692,0.00014423176,0.000028416564,0.000010462788,0.00009098731,0.00014560841,0.000012855553],"category_scores_gemma":[0.0057517644,0.00013740857,0.0010261177,0.00014631779,0.00024040967,0.00007641784,0.000026390213,0.00022393481,0.0000036147997],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050843228,0.00026983744,0.0004234759,0.13101144,0.001109335,0.0000040378577,0.000010818134,2.170752e-9,3.5042348e-8,0.00031216542,0.007959911,0.8588481],"study_design_scores_gemma":[0.0011042325,0.0022897332,0.000081446706,0.27204746,0.010660277,0.000014820664,0.0000026627663,0.0000046065416,7.5289984e-7,0.0028115502,0.7109088,0.00007372764],"about_ca_topic_score_codex":4.918982e-7,"about_ca_topic_score_gemma":2.951628e-7,"teacher_disagreement_score":0.85877436,"about_ca_system_score_codex":0.000051597704,"about_ca_system_score_gemma":0.00040663546,"threshold_uncertainty_score":0.68858147},"labels":[],"label_agreement":null},{"id":"W2808207128","doi":"10.1172/jci97116","title":"Inherited p40phox deficiency differs from classic chronic granulomatous disease","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Neutrophil, Myeloperoxidase and Oxidative Mechanisms","field":"Immunology and Microbiology","cited_by":133,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"NHLBI Division of Intramural Research; National Center for Research Resources; National Cancer Institute; Canadian Institutes of Health Research; National Center for Advancing Translational Sciences; Consejo Nacional de Ciencia y Tecnología; Agence Nationale de la Recherche; National Institutes of Health; U.S. Department of Health and Human Services; Japan Foundation for Pediatric Research; Lastentautien Tutkimussäätiö; Institut des maladies génétiques Imagine; Leona M. and Harry B. Helmsley Charitable Trust; Institut National de la Santé et de la Recherche Médicale; Division of Intramural Research, National Institute of Allergy and Infectious Diseases; National Institute of Allergy and Infectious Diseases; Université Paris Descartes; St. Giles Foundation; Departamento Administrativo de Ciencia, Tecnología e Innovación (COLCIENCIAS)","keywords":"Chronic granulomatous disease; NADPH oxidase; Compound heterozygosity; Biology; Oxidase test; Aspergillus fumigatus; Phagocyte; Immunology; Mutation; Candida albicans; Microbiology; Gene; Phagocytosis; Genetics; Enzyme; Reactive oxygen species; Biochemistry","score_opus":0.055779874915194906,"score_gpt":0.3287580882557917,"score_spread":0.2729782133405968,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2808207128","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932449,0.0013969331,0.0012657471,0.0012647732,0.0025389204,0.0001285207,0.000023145174,0.00003159522,0.00010548752],"genre_scores_gemma":[0.996919,0.00017677947,0.00050438585,0.0012489551,0.00090914324,0.00000308443,0.000047088633,0.000019224666,0.00017233475],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99733275,0.00065767684,0.0013643183,0.00026726205,0.00011420689,0.0002637703],"domain_scores_gemma":[0.99778247,0.00045805422,0.0009665458,0.00026219853,0.0003492808,0.00018146563],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00075342006,0.00018810946,0.00050750957,0.00012602213,0.0001777831,0.000028602304,0.00031662238,0.00025928416,0.0004882333],"category_scores_gemma":[0.0009625483,0.0001422407,0.00026938767,0.00021026126,0.00094447273,0.00026210342,0.000059288643,0.00060787034,0.00039632927],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000822276,0.00034161154,0.03809167,0.000021146063,0.00023304656,0.000061034916,0.00023278371,0.0000046761775,0.93478495,0.001448759,0.00686935,0.017088696],"study_design_scores_gemma":[0.0067304852,0.0038302,0.6704528,0.0004760716,0.00049027597,0.00005618099,0.00011940071,0.00011662095,0.25208035,0.045721624,0.019399164,0.0005268781],"about_ca_topic_score_codex":0.000021125625,"about_ca_topic_score_gemma":0.000013285311,"teacher_disagreement_score":0.6827046,"about_ca_system_score_codex":0.00006257784,"about_ca_system_score_gemma":0.0004006078,"threshold_uncertainty_score":0.5800407},"labels":[],"label_agreement":null},{"id":"W2867385468","doi":"10.1172/jci121744","title":"Vaginal epidermal dendritic cells: defense against HIV-1 or a safe haven?","year":2018,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Sex work and related issues","field":"Social Sciences","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women's College Hospital; University of Toronto","funders":"University of Toronto","keywords":"Langerin; Birbeck granules; Biology; Immunology; Virology; Lectin; Human immunodeficiency virus (HIV); Viral load; Viral replication; Langerhans cell; Dendritic cell; Virus; Immune system","score_opus":0.10257346570788964,"score_gpt":0.3952142316996396,"score_spread":0.29264076599174993,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2867385468","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08869691,0.0007966553,0.00013582846,0.88808775,0.011559238,0.00034806313,0.000009982274,0.0000622634,0.010303313],"genre_scores_gemma":[0.01849875,0.004091181,0.009527223,0.8181114,0.11382597,0.0000065187705,0.00008209696,0.00011378369,0.035743073],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9922497,0.002649695,0.0028156866,0.00036694613,0.0013558607,0.0005620978],"domain_scores_gemma":[0.9921532,0.003296401,0.0027613686,0.00028125278,0.0009997226,0.0005080242],"candidate_categories":["research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.0056417137,0.00031587528,0.0010576834,0.00027351157,0.00046005577,0.00023975839,0.00071088615,0.0022665763,0.0006044216],"category_scores_gemma":[0.0070520733,0.0002347879,0.0006449972,0.00038048858,0.0020364942,0.00041668623,0.000053915825,0.004382198,0.00053668325],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007798146,0.000049025224,0.0013242882,0.00004647673,0.00017029568,0.0010457531,0.0037022098,0.000013971526,0.000008047443,0.000029850396,0.99190825,0.0016238509],"study_design_scores_gemma":[0.0007391479,0.00037252696,0.0003242843,0.0010324275,0.00036522315,0.000048453443,0.0010071619,0.00006684704,0.000055343997,0.004465779,0.991193,0.0003298171],"about_ca_topic_score_codex":0.000066533066,"about_ca_topic_score_gemma":0.000051501567,"teacher_disagreement_score":0.10226674,"about_ca_system_score_codex":0.0001452209,"about_ca_system_score_gemma":0.0019612696,"threshold_uncertainty_score":0.9990287},"labels":[],"label_agreement":null},{"id":"W2883258608","doi":"10.1172/jci98093","title":"Optimal bone fracture repair requires 24R,25-dihydroxyvitamin D3 and its effector molecule FAM57B2","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"S100 Proteins and Annexins","field":"Biochemistry, Genetics and Molecular Biology","cited_by":76,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Queen's University; McGill University","funders":"National Institutes of Health; National Institute of Arthritis and Musculoskeletal and Skin Diseases; Shriners Hospitals for Children; Queen's University; McGill University","keywords":"Endochondral ossification; Callus; Cartilage; CYP24A1; Bone healing; Cell biology; Chemistry; Chondrocyte; Biology; Anatomy; Botany; Biochemistry; Gene; Calcitriol receptor","score_opus":0.03263693628454834,"score_gpt":0.3463395909982751,"score_spread":0.31370265471372677,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2883258608","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99692285,0.0009198201,0.000654392,0.00092425075,0.00024663203,0.00012956113,0.0000054279994,0.000009866942,0.00018717935],"genre_scores_gemma":[0.98972285,0.00015582507,0.0046244846,0.0025971432,0.0027072,0.0000030451288,0.00002082476,0.000016641137,0.0001519713],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998273,0.0002757139,0.0008020169,0.00024447666,0.00024149934,0.00016324913],"domain_scores_gemma":[0.9986175,0.000085006555,0.00058400555,0.00018678,0.00030749457,0.0002192665],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001460224,0.00014447502,0.00029590892,0.000053796986,0.0000764576,0.00003894913,0.00014535266,0.0003133538,0.000021604585],"category_scores_gemma":[0.0020919447,0.0001140072,0.00022450973,0.00008035829,0.00021654689,0.000025400956,0.00004994608,0.00027727397,0.000011210647],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036956384,0.00020960311,0.0094539635,0.000063866086,0.00015979943,0.00006760095,0.00016979393,0.000035717345,0.9593098,0.00017674123,0.028168134,0.0018153737],"study_design_scores_gemma":[0.0035266026,0.013315382,0.09208708,0.00030768657,0.00019943318,0.00038173166,0.0001203608,0.001782628,0.7905306,0.00081629254,0.09637424,0.00055790733],"about_ca_topic_score_codex":0.0000032580858,"about_ca_topic_score_gemma":0.000003570196,"teacher_disagreement_score":0.1687792,"about_ca_system_score_codex":0.0000059526897,"about_ca_system_score_gemma":0.00011468354,"threshold_uncertainty_score":0.46490785},"labels":[],"label_agreement":null},{"id":"W2883804067","doi":"10.1172/jci120549","title":"HIV-1 proviral landscapes distinguish posttreatment controllers from noncontrollers","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":83,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"AIDS Vancouver; Simon Fraser University","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; ACT Government; Brigham and Women's Hospital; Gilead Sciences; Harvard University; Harvard University Center for AIDS Research; Center for AIDS Research, University of Washington; Michael Smith Health Research BC; GlaxoSmithKline","keywords":"Genome; Biology; Peripheral blood mononuclear cell; CD8; Immune system; Human immunodeficiency virus (HIV); Virology; Virus; Immunology; Acquired immune system; Viral load; Gene; Genetics","score_opus":0.04762824174676433,"score_gpt":0.3526739322880203,"score_spread":0.30504569054125596,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2883804067","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932027,0.00071674446,0.00013220785,0.0028110298,0.0012727287,0.000234221,0.00009562208,0.000018648205,0.0015161268],"genre_scores_gemma":[0.9968542,0.000058815833,0.00077782304,0.00030723156,0.00097478385,0.000006380306,0.00014959593,0.000010684346,0.00086047],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977433,0.00055398815,0.0011427363,0.00019104725,0.0001118467,0.00025709983],"domain_scores_gemma":[0.997419,0.0010821822,0.00078462675,0.000165349,0.0004058932,0.00014291957],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00096343766,0.00014754315,0.0005777086,0.00008448516,0.00014405465,0.000032607175,0.00018260311,0.00020478434,0.0004551304],"category_scores_gemma":[0.0022817978,0.000097441,0.00028703173,0.000079490885,0.00047037838,0.00013894498,0.00003067182,0.00037304542,0.0011503834],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007369402,0.0010490253,0.8410757,0.000009874279,0.0037065742,0.00015437951,0.0009703437,0.000020211419,0.024111578,0.0002317475,0.08052447,0.04077668],"study_design_scores_gemma":[0.077869065,0.01635409,0.7350856,0.0003786147,0.0010985117,0.00013433774,0.00071734237,0.00035413512,0.026419487,0.004697888,0.13629864,0.00059226126],"about_ca_topic_score_codex":0.00008795336,"about_ca_topic_score_gemma":0.00005701739,"teacher_disagreement_score":0.10599009,"about_ca_system_score_codex":0.0000600191,"about_ca_system_score_gemma":0.000348035,"threshold_uncertainty_score":0.99962735},"labels":[],"label_agreement":null},{"id":"W2883909768","doi":"10.1172/jci99315","title":"Endothelial cell CD36 optimizes tissue fatty acid uptake","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Adipose Tissue and Metabolism","field":"Medicine","cited_by":256,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"School of Medicine, New York University; York University; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; University of Washington; NYU Langone Medical Center","keywords":"CD36; Adipose tissue; Internal medicine; Endocrinology; Glucose uptake; Insulin; Lipotoxicity; Parenchyma; Biology; Fatty acid; Lipid metabolism; Cell; Endothelial stem cell; Chemistry; Receptor; Insulin resistance; Biochemistry; Medicine; In vitro","score_opus":0.08854056074036706,"score_gpt":0.390938343573742,"score_spread":0.30239778283337493,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2883909768","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9847489,0.0007696384,0.003819343,0.003430332,0.002500893,0.0001920944,0.000004695622,0.000025436979,0.0045086485],"genre_scores_gemma":[0.9006853,0.00039961704,0.08266208,0.0031608609,0.010930801,0.0000015675936,0.000006423946,0.000027381242,0.0021259668],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974794,0.00016076434,0.0015660502,0.00016582447,0.00043654224,0.00019144868],"domain_scores_gemma":[0.9974788,0.00020342722,0.0009585435,0.00022443042,0.00061201584,0.00052279705],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016210957,0.00013814657,0.00064056535,0.00010553104,0.0000640875,0.000022924025,0.00013798685,0.00022365853,0.00039250197],"category_scores_gemma":[0.0020377932,0.000102295446,0.00023361796,0.0001461121,0.00040363971,0.00023871781,0.000026649066,0.00052921777,0.0002560069],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025845442,0.00096220034,0.02674079,0.0001567616,0.00045777453,0.00035816402,0.0020479504,0.0000208725,0.69586647,0.0014679088,0.06175802,0.20757852],"study_design_scores_gemma":[0.006337639,0.0034095468,0.07179228,0.00023466421,0.0007295318,0.00031357034,0.00010403534,0.0002021161,0.67912775,0.0031951624,0.23435055,0.00020314284],"about_ca_topic_score_codex":0.0000068772842,"about_ca_topic_score_gemma":0.0000023129503,"teacher_disagreement_score":0.20737538,"about_ca_system_score_codex":0.000017862461,"about_ca_system_score_gemma":0.00037010218,"threshold_uncertainty_score":0.42976213},"labels":[],"label_agreement":null},{"id":"W2886206473","doi":"10.1172/jci96400","title":"The endothelial cell receptor stabilin-2 regulates VWF-FVIII complex half-life and immunogenicity","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Platelet Disorders and Treatments","field":"Medicine","cited_by":79,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"National Heart, Lung, and Blood Institute; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Immunogenicity; Receptor; Cell biology; Endothelium; Endothelial stem cell; Cell; Chemistry; Biology; Immunology; Biochemistry; Antibody; Endocrinology","score_opus":0.08506243811609118,"score_gpt":0.36383178208642114,"score_spread":0.27876934397032993,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2886206473","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99126136,0.0004638271,0.000030361753,0.0069047147,0.0004868019,0.00017551125,0.0000059851495,0.000009959381,0.0006614743],"genre_scores_gemma":[0.99466574,0.00069383153,0.0025726322,0.0010321311,0.0007964032,0.0000013433237,0.000008485047,0.000012923681,0.00021650178],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99801636,0.0002010754,0.0011818385,0.00013962234,0.00030128023,0.00015984783],"domain_scores_gemma":[0.99754614,0.00076980476,0.000788293,0.0001809293,0.00039710384,0.00031775617],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013599305,0.00011647416,0.00044630666,0.000037885726,0.0002127161,0.00004292971,0.00009738962,0.000121846664,0.00007286542],"category_scores_gemma":[0.0018974397,0.00006958222,0.00017979823,0.00009100533,0.0007516628,0.00012475306,0.000030920808,0.00030843035,0.000031189975],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.013151167,0.0024436295,0.59523094,0.00019996449,0.002115183,0.00017187258,0.0018621542,0.000010696796,0.26201692,0.003337634,0.052227817,0.067232035],"study_design_scores_gemma":[0.030764284,0.0122631,0.6905444,0.00044294272,0.0010532805,0.00066551863,0.0009001309,0.0022847003,0.09728381,0.031556696,0.13169557,0.0005455191],"about_ca_topic_score_codex":0.000028819542,"about_ca_topic_score_gemma":0.000028879871,"teacher_disagreement_score":0.16473311,"about_ca_system_score_codex":0.00002280929,"about_ca_system_score_gemma":0.00033928893,"threshold_uncertainty_score":0.28374803},"labels":[],"label_agreement":null},{"id":"W2886930165","doi":"10.1172/jci121960","title":"Circulating and intrahepatic antiviral B cells are defective in hepatitis B","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":326,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Medical Research Council; National Institute for Health and Care Research; Gilead Sciences; Wellcome Trust; F. Hoffmann-La Roche; Roche","keywords":"HBsAg; Hepatitis B virus; Antibody; Immunology; Hepatitis B; Antigen; Biology; Virology; B cell; Medicine; Virus","score_opus":0.080721254435213,"score_gpt":0.3812247071006864,"score_spread":0.3005034526654734,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2886930165","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978187,0.00011292632,0.00018927231,0.000875926,0.00042833484,0.00015294013,0.0000017361584,0.000008794363,0.0004113881],"genre_scores_gemma":[0.9938402,0.00034402322,0.0040176394,0.0009131196,0.00085489306,0.0000016846983,7.8011817e-7,0.000012167343,0.000015498208],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99788696,0.00026720995,0.0012758378,0.00015117554,0.00027080774,0.00014800673],"domain_scores_gemma":[0.9978036,0.000633526,0.00086998154,0.00009428548,0.00043859822,0.0001599895],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015565233,0.00010486151,0.00059093337,0.00014920183,0.000055015054,0.000018182349,0.0000426574,0.00012025283,0.000013001665],"category_scores_gemma":[0.005486742,0.000087328335,0.00010061781,0.00021468187,0.00047248197,0.00022232682,0.000032705615,0.00043678292,0.000013026617],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057818233,0.00005691344,0.988928,0.000043513523,0.000050594685,0.0001108157,0.0006356874,0.0000012015078,0.001959947,0.00004414757,0.00029038312,0.007820957],"study_design_scores_gemma":[0.0012148663,0.0009666527,0.9893174,0.00077952835,0.000083628205,0.0000609587,0.00006478053,0.0015523662,0.0030997982,0.0026846528,0.00009476828,0.00008056422],"about_ca_topic_score_codex":0.00025573032,"about_ca_topic_score_gemma":0.0010926198,"teacher_disagreement_score":0.007740393,"about_ca_system_score_codex":0.000060580336,"about_ca_system_score_gemma":0.00014373257,"threshold_uncertainty_score":0.6568539},"labels":[],"label_agreement":null},{"id":"W2887450160","doi":"10.1172/jci98199","title":"Activity-dependent neuroprotective protein deficiency models synaptic and developmental phenotypes of autism-like syndrome","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Autism Spectrum Disorder Research","field":"Neuroscience","cited_by":100,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"CIHR Skin Research Training Centre; European Regional Development Fund; Canadian Institutes of Health Research; Israel Science Foundation; Ministerstvo Školství, Mládeže a Tělovýchovy; McGill University; National Science Foundation; Tel Aviv University; ERA-Net NEURON","keywords":"Neuroprotection; Autism; Phenotype; Neuroscience; Biology; Medicine; Genetics; Gene; Psychiatry","score_opus":0.11171376338398041,"score_gpt":0.35900405317836037,"score_spread":0.24729028979437995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2887450160","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933995,0.000039826336,0.0037642056,0.0016816264,0.00019741699,0.00043580853,0.0000034544535,0.000016928643,0.0004612101],"genre_scores_gemma":[0.99735874,0.000034978082,0.0023275781,0.00013968952,0.000043347573,0.0000069451385,1.2979697e-7,0.000018914438,0.00006965076],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9968413,0.00067871815,0.0010405724,0.00034080626,0.0008428204,0.00025578577],"domain_scores_gemma":[0.99773675,0.00056860695,0.0012152918,0.00015378084,0.00009091892,0.00023462792],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016406847,0.00014704447,0.00041444346,0.00020907208,0.0001544159,0.000048425012,0.00032695514,0.00012640082,0.000036608148],"category_scores_gemma":[0.0038888543,0.00012366186,0.00008982754,0.0003689572,0.0011348608,0.00074161,0.00016744796,0.0006664048,0.000021842347],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001102592,0.0010299768,0.006856301,0.00020835374,0.00008702425,0.00023888951,0.0021011946,0.00022487155,0.91994977,0.049708355,0.00003647265,0.018456193],"study_design_scores_gemma":[0.00259533,0.0068061575,0.16958137,0.00040874732,0.00006794136,0.0012164905,0.00013011198,0.020165555,0.3962375,0.40231133,0.000030709827,0.00044877693],"about_ca_topic_score_codex":0.000030638865,"about_ca_topic_score_gemma":0.000010752256,"teacher_disagreement_score":0.5237123,"about_ca_system_score_codex":0.000059048652,"about_ca_system_score_gemma":0.0005360129,"threshold_uncertainty_score":0.5042784},"labels":[],"label_agreement":null},{"id":"W2890056446","doi":"10.1172/jci99317","title":"Contribution of NK cells to immunotherapy mediated by PD-1/PD-L1 blockade","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":827,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"National Institute of General Medical Sciences; National Cancer Institute; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Cytotoxic T cell; Immunotherapy; Blockade; Cancer immunotherapy; Cancer research; PD-L1; Immunology; Immune checkpoint; Biology; Immune system; Lymphokine-activated killer cell; T cell; Interleukin 21; In vitro; Receptor","score_opus":0.031063308405792984,"score_gpt":0.3320367425043094,"score_spread":0.30097343409851646,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2890056446","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.985656,0.00061767054,0.0024384398,0.0019842335,0.008724682,0.00016937568,0.000007810569,0.000018983425,0.00038275225],"genre_scores_gemma":[0.99465406,0.00030008124,0.0002455345,0.0020560792,0.00035942896,0.0000022016702,0.00006935088,0.0000133337835,0.0022999342],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99720025,0.00054795237,0.0018276051,0.00014842811,0.000097290394,0.00017845188],"domain_scores_gemma":[0.9965518,0.0006099762,0.0014898108,0.00017238538,0.0011050454,0.000070998154],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0017427303,0.0001295461,0.00048135474,0.0001496998,0.000089006644,0.000013789349,0.00018197337,0.00036691868,0.0010273135],"category_scores_gemma":[0.0019393127,0.000106420805,0.00022325739,0.0002073211,0.00035995556,0.00022107523,0.000021963473,0.0005118706,0.00051373185],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013137045,0.00014647764,0.0015766332,0.0000038772823,0.00016484258,4.3404336e-7,0.00016190362,0.000003586107,0.8969973,0.00007881016,0.09783381,0.0017186248],"study_design_scores_gemma":[0.0020611342,0.0019645467,0.0061685345,0.00008056726,0.000042592987,0.000018284212,0.000060581202,0.000022249216,0.7421738,0.00018882677,0.24712868,0.000090210946],"about_ca_topic_score_codex":0.000028913166,"about_ca_topic_score_gemma":0.0000037488358,"teacher_disagreement_score":0.1548235,"about_ca_system_score_codex":0.00004556561,"about_ca_system_score_gemma":0.00012981417,"threshold_uncertainty_score":0.99988586},"labels":[],"label_agreement":null},{"id":"W2891110262","doi":"10.1172/jci120401","title":"Ubiquitin ligase RNF8 suppresses Notch signaling to regulate mammary development and tumorigenesis","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Tech University; Hôpital Maisonneuve-Rosemont; Princess Margaret Cancer Centre; Jewish General Hospital; University of Toronto; University Health Network","funders":"European Regional Development Fund; University Health Network; University of Toronto; Instituto de Salud Carlos III; Ministerio de Economía y Competitividad; Generalitat de Catalunya","keywords":"Ubiquitin ligase; Notch signaling pathway; Cancer research; Carcinogenesis; Biology; Ubiquitin; Hes3 signaling axis; Signal transduction; DNA repair; Breast cancer; Cell biology; Cancer; Genetics; DNA; Gene","score_opus":0.046878078033136726,"score_gpt":0.33791089790248524,"score_spread":0.29103281986934854,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2891110262","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99329513,0.000114350274,0.005162136,0.0008701183,0.00040003276,0.00008766145,0.0000011855115,0.0000072477314,0.00006214984],"genre_scores_gemma":[0.91095495,0.00004414558,0.086329564,0.001333509,0.0010767913,0.0000028675734,0.000006476087,0.000014833596,0.00023683108],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99834627,0.00014203096,0.00093169603,0.00021941295,0.0002123154,0.000148285],"domain_scores_gemma":[0.99861443,0.00006972231,0.00044085697,0.00017481198,0.00038427158,0.00031591792],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015880751,0.00011340766,0.00023267423,0.00006090689,0.00006902117,0.000042353902,0.00017510355,0.00014676961,0.000011507804],"category_scores_gemma":[0.0012338526,0.000099975245,0.000080576814,0.00008326271,0.00010350448,0.000016751183,0.000118541,0.00010818489,0.000007995069],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015228492,0.000039951385,0.0026382343,0.000022984637,0.00006066467,0.000014161083,0.0001459589,0.00001964909,0.9801293,0.00010217836,0.0014333682,0.015241272],"study_design_scores_gemma":[0.0003685916,0.0007871169,0.0074917306,0.0000888952,0.00002828967,0.000045268025,0.000029920991,0.000052474654,0.9793927,0.0009116644,0.010679588,0.00012374877],"about_ca_topic_score_codex":0.0000016022583,"about_ca_topic_score_gemma":0.000005818027,"teacher_disagreement_score":0.082340136,"about_ca_system_score_codex":0.000010641914,"about_ca_system_score_gemma":0.0002783655,"threshold_uncertainty_score":0.40768722},"labels":[],"label_agreement":null},{"id":"W2891921574","doi":"10.1172/jci98688","title":"Mutations in multiple components of the nuclear pore complex cause nephrotic syndrome","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Renal Diseases and Glomerulopathies","field":"Medicine","cited_by":144,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of General Medical Sciences; Harvard Stem Cell Institute; National Institutes of Health; Deutsche Akademie der Naturforscher Leopoldina - Nationale Akademie der Wissenschaften; National Heart, Lung, and Blood Institute; King Saud University; Deutsche Forschungsgemeinschaft; Higher Education Commision, Pakistan; Universität zu Köln; Boston Children's Hospital; Kidney Foundation of Canada; European Commission; Academy of Medical Sciences; Institut des maladies génétiques Imagine; Yale University; Canadian Society of Nephrology; National Human Genome Research Institute; Agence Nationale de la Recherche; Canadian Institutes of Health Research; American Society of Nephrology; University of Michigan","keywords":"Biology; Gene knockdown; Phenotype; Nuclear pore; Morpholino; Nucleoporin; Zebrafish; Nephrotic syndrome; Mutation; Genetics; Allele; Gene; Cell biology; Cancer research; Nuclear transport; Cell nucleus; Cytoplasm; Endocrinology","score_opus":0.15732150851707705,"score_gpt":0.3829316394708059,"score_spread":0.22561013095372884,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2891921574","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965161,0.00004039423,0.000012186139,0.0029060692,0.00027095326,0.00015956169,0.0000064361784,0.0000043472373,0.00008397037],"genre_scores_gemma":[0.997682,0.000026520833,0.0010862672,0.00097300264,0.0001890766,6.1673387e-7,0.000009209928,0.000009338044,0.000023983011],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99805933,0.00019445752,0.0012286712,0.00008217542,0.0003422691,0.000093122086],"domain_scores_gemma":[0.9982344,0.00029400917,0.00078885444,0.00016095623,0.00034427812,0.0001775239],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00058746367,0.00007142238,0.0003721147,0.000094829236,0.00005243835,0.0000095846935,0.00010642799,0.00007277013,0.000057517427],"category_scores_gemma":[0.0023473527,0.00004521126,0.00021657399,0.00025327253,0.0006374101,0.00011753946,0.000030418261,0.00027398436,0.000012141594],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003713043,0.00044636521,0.98784167,0.000118892654,0.000115605755,0.000101332,0.0004434729,0.00008351049,0.007853411,0.00032088385,0.001514137,0.00078943075],"study_design_scores_gemma":[0.0016729325,0.000588747,0.9911994,0.0005835226,0.0001304095,0.00019354348,0.00011120225,0.0030533099,0.00012805469,0.0018375701,0.00045893298,0.000042376232],"about_ca_topic_score_codex":0.0000338044,"about_ca_topic_score_gemma":0.000017893539,"teacher_disagreement_score":0.007725356,"about_ca_system_score_codex":0.000024033758,"about_ca_system_score_gemma":0.0001336722,"threshold_uncertainty_score":0.281017},"labels":[],"label_agreement":null},{"id":"W2895375308","doi":"10.1172/jci93090","title":"Macrophage migration inhibitory factor mediates metabolic dysfunction induced by atypical antipsychotic therapy","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Macrophage Migration Inhibitory Factor","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"National Heart, Lung, and Blood Institute; National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; National Institute of Arthritis and Musculoskeletal and Skin Diseases; Shanghai Jiao Tong University; National Institutes of Health; National Science Foundation; Yale University; Memorial University of Newfoundland; National Natural Science Foundation of China","keywords":"Macrophage migration inhibitory factor; Antipsychotic; Inhibitory postsynaptic potential; Medicine; Schizophrenia (object-oriented programming); Macrophage; Atypical antipsychotic; Pharmacology; Immunology; Internal medicine; Biology; Psychiatry; Cytokine; Biochemistry; In vitro","score_opus":0.06459965164496478,"score_gpt":0.34237847757471856,"score_spread":0.2777788259297538,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2895375308","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98786324,0.002084981,0.00065785425,0.0009911412,0.008043961,0.0002472045,0.000021937696,0.00004926002,0.00004044631],"genre_scores_gemma":[0.9957565,0.00040730048,0.0002979685,0.001052703,0.0020109494,0.000005968554,0.00006327986,0.000028628103,0.00037672327],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9958749,0.0011892113,0.0021340856,0.00032021815,0.00020640886,0.00027516705],"domain_scores_gemma":[0.9964984,0.0006187617,0.0017055515,0.0002595993,0.0007625558,0.00015512505],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0014309381,0.00025985768,0.00063529855,0.00021065467,0.00020212974,0.00005654033,0.00025095575,0.00067836285,0.0011473653],"category_scores_gemma":[0.0016990979,0.0002018667,0.00031047114,0.0002855545,0.00062397536,0.00057631294,0.00002499849,0.0009295795,0.00049813173],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009331069,0.00022523118,0.026099794,0.000006266005,0.0001844988,0.000002079204,0.000520953,6.4384403e-7,0.9242023,0.00007566797,0.033981588,0.01376787],"study_design_scores_gemma":[0.0037052846,0.0018216129,0.25343776,0.000051898896,0.00006610168,0.000032871158,0.00008288893,0.000027078508,0.70269126,0.0005278893,0.037319057,0.00023632695],"about_ca_topic_score_codex":0.000022216878,"about_ca_topic_score_gemma":0.000022765511,"teacher_disagreement_score":0.22733796,"about_ca_system_score_codex":0.000038508995,"about_ca_system_score_gemma":0.00023795999,"threshold_uncertainty_score":0.9997657},"labels":[],"label_agreement":null},{"id":"W2898125316","doi":"10.1172/jci121303","title":"DNA hypermethylation within TERT promoter upregulates TERT expression in cancer","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":187,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women's College Hospital; Princess Margaret Cancer Centre; Toronto Western Hospital; Hospital for Sick Children; University of British Columbia; McGill University; University of Calgary; Montreal Neurological Institute and Hospital; University Health Network; SickKids Foundation; University of Toronto","funders":"National Institute of General Medical Sciences; Fundação para a Ciência e a Tecnologia; Canadian Cancer Society Research Institute; Canadian Institutes of Health Research; Centro de Investigação em Biomedicina","keywords":"DNA methylation; Telomerase; Telomere; Downregulation and upregulation; Cancer; Telomerase reverse transcriptase; Cancer research; CpG site; Methylation; Epigenetics; Biology; Molecular biology; Cancer cell; DNA; Gene expression; Gene; Genetics","score_opus":0.10296398178250638,"score_gpt":0.41082243855121925,"score_spread":0.3078584567687129,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2898125316","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99488693,0.00015762984,0.00016808805,0.0034570862,0.0009818485,0.00020267209,0.0000012003151,0.000017170378,0.00012734908],"genre_scores_gemma":[0.9895488,0.0000872578,0.00707577,0.0011679095,0.0018329759,0.0000041706467,0.000005370776,0.000018201965,0.00025951536],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9972311,0.0002435508,0.0016907963,0.00021425405,0.00044765207,0.00017261413],"domain_scores_gemma":[0.9979483,0.00022556158,0.0009212205,0.00019329517,0.00043458244,0.00027705886],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017172907,0.00013953526,0.00050053257,0.00020128337,0.000049352053,0.00002579059,0.00011387122,0.00023045842,0.00011745356],"category_scores_gemma":[0.001654778,0.00009855381,0.00013719148,0.0002637277,0.0003246775,0.00041370824,0.000024621271,0.00048467447,0.000015559883],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000616841,0.0002186505,0.6966261,0.00006612568,0.000032871838,0.000037024573,0.0013411695,0.000016989095,0.2758858,0.000017459415,0.0011546717,0.02398632],"study_design_scores_gemma":[0.0018552077,0.0008549285,0.7813328,0.0014383016,0.000058257425,0.000063995976,0.00006750869,0.001621748,0.21013519,0.0016932024,0.0007603677,0.00011849844],"about_ca_topic_score_codex":0.00002928391,"about_ca_topic_score_gemma":0.000035058554,"teacher_disagreement_score":0.08470669,"about_ca_system_score_codex":0.00006515008,"about_ca_system_score_gemma":0.0003366374,"threshold_uncertainty_score":0.40189078},"labels":[],"label_agreement":null},{"id":"W2898955021","doi":"10.1172/jci122064","title":"Acetaldehyde dehydrogenase 2 interactions with LDLR and AMPK regulate foam cell formation","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Alcohol Consumption and Health Effects","field":"Medicine","cited_by":88,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Wuhan University; National Natural Science Foundation of China; Ministry of Science and Technology of the People's Republic of China; Chinese Academy of Sciences; University of Alberta; Georgia State University","keywords":"ALDH2; LDL receptor; Acetaldehyde; Chemistry; Cell biology; Biology; Aldehyde dehydrogenase; Biochemistry; Lipoprotein; Cholesterol; Enzyme; Ethanol","score_opus":0.19324731703546366,"score_gpt":0.4617449946419916,"score_spread":0.26849767760652793,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2898955021","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9914795,0.000092966045,0.0018791166,0.0053821374,0.00032295106,0.00020993424,8.336711e-7,0.000017558463,0.0006149993],"genre_scores_gemma":[0.9875056,0.00013337121,0.008292405,0.002953494,0.0007769731,0.000002413774,0.0000061725405,0.000011330552,0.00031821584],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984031,0.00015827027,0.0009579777,0.00010976936,0.0002495563,0.00012137705],"domain_scores_gemma":[0.9977414,0.00029149454,0.0009021718,0.00012700638,0.00049845653,0.00043948847],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011706863,0.00009243568,0.00031769887,0.00013367907,0.00010433756,0.000025448235,0.000038408838,0.000096023345,0.0000582616],"category_scores_gemma":[0.0005975117,0.000064950815,0.00008220981,0.00013378216,0.00029628235,0.00047462957,0.000013434575,0.00041158168,0.000042924068],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.014911941,0.001929737,0.6064031,0.0027439685,0.00081031176,0.00028453505,0.0071098586,0.000078240984,0.1391056,0.0024747164,0.04898524,0.17516273],"study_design_scores_gemma":[0.0137071395,0.0097530475,0.8603102,0.0020125404,0.0008700027,0.002760794,0.00032577917,0.011519175,0.046435177,0.0027797827,0.049169518,0.00035682827],"about_ca_topic_score_codex":0.000003565724,"about_ca_topic_score_gemma":0.000022778047,"teacher_disagreement_score":0.25390708,"about_ca_system_score_codex":0.000040216186,"about_ca_system_score_gemma":0.00022173938,"threshold_uncertainty_score":0.26486173},"labels":[],"label_agreement":null},{"id":"W2899632244","doi":"10.1172/jci96098","title":"Accessory heterozygous mutations in cone photoreceptor CNGA3 exacerbate CNG channel–associated retinopathy","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Retinal Development and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"National Eye Institute; Eberhard Karls Universität Tübingen; Deutsche Forschungsgemeinschaft; ERAB: The European Foundation for Alcohol Research; Bundesministerium für Bildung und Forschung; National Institute for Health and Care Research","keywords":"Achromatopsia; Genetics; Retinal Disorder; Mutation; Allele; Phenotype; Biology; Retinal; Gene","score_opus":0.05385788611792888,"score_gpt":0.3537389774303939,"score_spread":0.299881091312465,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2899632244","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99749386,0.00012144477,0.0002532405,0.000536252,0.000823797,0.00011431735,0.0000030772248,0.0000059976974,0.000647981],"genre_scores_gemma":[0.99748,0.00018725624,0.00063401024,0.0007834974,0.00054763426,0.0000044706017,0.0000561953,0.000014518101,0.0002924511],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980144,0.00029339365,0.0011217573,0.00018493895,0.00021257857,0.00017296692],"domain_scores_gemma":[0.9983981,0.00009142172,0.00083817536,0.00010766504,0.00041355292,0.0001510325],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015402848,0.00011781741,0.00027058483,0.00009222924,0.0000613389,0.00003188291,0.00017414641,0.0002282818,0.00004462416],"category_scores_gemma":[0.0028968467,0.00010654886,0.00013021217,0.00018081555,0.00029356804,0.000023557846,0.000042024825,0.00023162147,0.000014816749],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001840029,0.0007652523,0.6190584,0.000055702723,0.0003585179,0.000049024988,0.0015622495,0.00020257242,0.34157625,0.00008155956,0.02573321,0.008717259],"study_design_scores_gemma":[0.007203772,0.0041964105,0.74048406,0.00040818856,0.00010290357,0.000043887198,0.00055489637,0.0010589265,0.22852981,0.0066188877,0.010112617,0.000685616],"about_ca_topic_score_codex":0.000008589944,"about_ca_topic_score_gemma":0.000050298728,"teacher_disagreement_score":0.12142571,"about_ca_system_score_codex":0.000021465634,"about_ca_system_score_gemma":0.0002253425,"threshold_uncertainty_score":0.43449363},"labels":[],"label_agreement":null},{"id":"W2900926271","doi":"10.1172/jci124011","title":"Rescue of recurrent deep intronic mutation underlying cell type–dependent quantitative NEMO deficiency","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immunodeficiency and Autoimmune Disorders","field":"Immunology and Microbiology","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"NIHR Newcastle Biomedical Research Centre; Japan Society for the Promotion of Science; National Institutes of Health; Institut National de la Santé et de la Recherche Médicale; Agence Nationale de Sécurité du Médicament et des Produits de Santé; Japan Agency for Medical Research and Development; Newcastle University; Hospital for Sick Children; National Institute of Allergy and Infectious Diseases; Howard Hughes Medical Institute; Université Paris Descartes; Research Center Network for Realization of Regenerative Medicine; National Institute for Health and Care Research; St. Giles Foundation; Agence Nationale de la Recherche","keywords":"Mutation; Genetics; Biology; Computational biology; Gene","score_opus":0.09378151201178306,"score_gpt":0.3848726889200379,"score_spread":0.2910911769082548,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2900926271","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98312837,0.009242891,0.0037518262,0.00023731978,0.0029461137,0.00012327924,0.0000020670882,0.000010625874,0.0005575312],"genre_scores_gemma":[0.99873894,0.0002610278,0.0007317713,0.00011375635,0.000024121146,9.999891e-7,0.000016836422,0.000009954021,0.00010259095],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99712145,0.00061978196,0.0017519041,0.00017354141,0.00012083377,0.00021250501],"domain_scores_gemma":[0.9970064,0.0005455336,0.001476193,0.0001748656,0.00077836204,0.000018614606],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002282078,0.0001292452,0.00041944734,0.00016255573,0.00015252993,0.000013991294,0.00026451875,0.00023363323,0.00013600504],"category_scores_gemma":[0.001964533,0.00010704332,0.00018401959,0.00028394573,0.0007873049,0.00025825616,0.000040018433,0.00057136785,0.00012223996],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0037435514,0.002272076,0.011288622,0.00022138795,0.00048349137,0.00001428728,0.013070279,0.0021171968,0.7528116,0.020881629,0.00084919523,0.19224668],"study_design_scores_gemma":[0.02194881,0.044308946,0.37210223,0.0017326822,0.0012985704,0.00035272565,0.021542478,0.0051575447,0.45114863,0.06958118,0.009178935,0.0016472713],"about_ca_topic_score_codex":0.000034958044,"about_ca_topic_score_gemma":0.0000143347515,"teacher_disagreement_score":0.3608136,"about_ca_system_score_codex":0.00003852467,"about_ca_system_score_gemma":0.0003729898,"threshold_uncertainty_score":0.43651},"labels":[],"label_agreement":null},{"id":"W2901208879","doi":"10.1172/jci121004","title":"Type I IFN blockade uncouples immunotherapy-induced antitumor immunity and autoimmune toxicity","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Children's Hospital of Eastern Ontario; Ottawa Hospital; McMaster University Medical Centre","funders":"Canadian Institutes of Health Research; Terry Fox Research Institute; Ontario Institute for Cancer Research","keywords":"Immunotherapy; Oncolytic virus; Immunology; Medicine; Melanoma; Cancer immunotherapy; Immunosuppression; Blockade; Tumor microenvironment; Antigen; Cancer research; Immune system; Receptor; Internal medicine","score_opus":0.08244466000754858,"score_gpt":0.40139462229742134,"score_spread":0.31894996228987277,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2901208879","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99780065,0.0008613446,0.00008938777,0.00061539357,0.00043561874,0.00010119377,0.0000021024805,0.000006232311,0.000088050096],"genre_scores_gemma":[0.9962368,0.00086625793,0.0010708234,0.0006201239,0.0010484216,0.0000010081668,0.000008612719,0.000019402718,0.000128554],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99811625,0.00042962903,0.00084708177,0.00017418349,0.00025476472,0.0001780619],"domain_scores_gemma":[0.99829626,0.00009905145,0.00052964885,0.0003100256,0.0006041457,0.00016086416],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025397015,0.00012726283,0.0002996633,0.00006671261,0.00012776931,0.00004156343,0.0002646973,0.00020969597,0.000045254958],"category_scores_gemma":[0.001091863,0.000106061685,0.00012283029,0.00015624802,0.00048333593,0.00001633026,0.00007588126,0.00037962457,0.000009857101],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00206967,0.00008182874,0.008594155,0.000006465063,0.00011464103,0.0000025244744,0.00004770893,0.0000065303966,0.9794954,0.000009185491,0.00039310113,0.009178799],"study_design_scores_gemma":[0.0014991622,0.011220025,0.070352405,0.000043781798,0.000021071819,0.000035586265,0.000040482824,0.00023363257,0.91321284,0.0006607005,0.002535539,0.00014478495],"about_ca_topic_score_codex":0.000019288016,"about_ca_topic_score_gemma":0.000059275146,"teacher_disagreement_score":0.06628256,"about_ca_system_score_codex":0.0000135249675,"about_ca_system_score_gemma":0.00041943297,"threshold_uncertainty_score":0.432507},"labels":[],"label_agreement":null},{"id":"W2901444941","doi":"10.1172/jci125264","title":"Blocking HIV-1 replication: are Fc–Fcγ receptor interactions required?","year":2018,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Receptor; Viral replication; Blocking (statistics); Simian immunodeficiency virus; In vivo; Virology; Human immunodeficiency virus (HIV); Replication (statistics); Immunology; Fc receptor; Biology; Virus; Antibody; Computer science; Genetics","score_opus":0.21884101574675813,"score_gpt":0.4629779895469273,"score_spread":0.2441369738001692,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2901444941","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07255308,0.00029581832,0.000098657656,0.9217966,0.00272901,0.0003039262,0.00005764038,0.000032031672,0.002133235],"genre_scores_gemma":[0.00428149,0.001241548,0.012488331,0.7748231,0.13812037,0.000022304597,0.0009982673,0.00012830472,0.06789628],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9942404,0.0005368405,0.0030655481,0.000511572,0.0012946866,0.00035095375],"domain_scores_gemma":[0.9915161,0.0015869248,0.0035687804,0.0007487604,0.0021199184,0.00045952864],"candidate_categories":["research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0026326852,0.0003100248,0.0012114377,0.00037115224,0.00016553281,0.000085246764,0.0003992702,0.0008921116,0.0010456002],"category_scores_gemma":[0.006736614,0.0002360626,0.0008514527,0.00032947198,0.00068566203,0.0002928774,0.00010452885,0.0051962654,0.0007910502],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041962418,0.00008201558,0.014719815,0.00023805813,0.0003285542,0.00023573746,0.00005774087,8.6487745e-7,0.00038499685,0.000017284841,0.98017615,0.0033391602],"study_design_scores_gemma":[0.0007412174,0.0009640372,0.009248874,0.0023084846,0.00029506368,0.0006701738,0.000027934684,0.00013355716,0.00063692936,0.00088399556,0.9838776,0.00021211217],"about_ca_topic_score_codex":0.000014319819,"about_ca_topic_score_gemma":0.000004622456,"teacher_disagreement_score":0.14697349,"about_ca_system_score_codex":0.00015562822,"about_ca_system_score_gemma":0.0007986799,"threshold_uncertainty_score":0.99998695},"labels":[],"label_agreement":null},{"id":"W2901685517","doi":"10.1172/jci122466","title":"Fc-dependent functions are redundant to efficacy of anti-HIV antibody PGT121 in macaques","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":84,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Infection and Immunity; National Health and Medical Research Council; Medical Research Council; University of Melbourne; Australian Centre for HIV and Hepatitis Virology Research","keywords":"Viremia; Simian immunodeficiency virus; Macaque; Antibody; Rhesus macaque; Virology; Immunology; Biology; Neutralizing antibody; Human immunodeficiency virus (HIV); Virus; AIDS Vaccines; Neuroscience; Vaccine trial","score_opus":0.08087076611623029,"score_gpt":0.41681369097564047,"score_spread":0.3359429248594102,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2901685517","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99600124,0.00017844664,0.00026415818,0.002418471,0.0006401804,0.00017224211,0.000037731254,0.000008039216,0.0002795129],"genre_scores_gemma":[0.99842525,0.00012946101,0.0004646235,0.000169215,0.0002258185,0.000002149924,0.000046480563,0.000008031606,0.0005289474],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99770916,0.0005122848,0.0012839683,0.00016866245,0.00011274724,0.00021315865],"domain_scores_gemma":[0.99820817,0.0004335277,0.0006542108,0.00018270045,0.0004001652,0.0001212096],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0013674691,0.00010304393,0.00047499075,0.0002570187,0.000070366885,0.000012751662,0.000172623,0.00016423604,0.00021437627],"category_scores_gemma":[0.0023135634,0.00007710293,0.00015790953,0.00023598039,0.00043063803,0.00014769816,0.00004994954,0.00045287187,0.0008290871],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013636227,0.0012292246,0.6894547,0.000023372651,0.00037887177,0.000058166814,0.00059910724,0.00004181522,0.287328,0.00013180546,0.011046665,0.008344676],"study_design_scores_gemma":[0.0029848434,0.0022646892,0.94399464,0.0002601253,0.0000508241,0.000050712624,0.00019094918,0.0000045913284,0.043934837,0.0002159277,0.005966586,0.000081262086],"about_ca_topic_score_codex":0.000045184377,"about_ca_topic_score_gemma":0.00006482708,"teacher_disagreement_score":0.25454,"about_ca_system_score_codex":0.000039770384,"about_ca_system_score_gemma":0.00024014841,"threshold_uncertainty_score":0.99994886},"labels":[],"label_agreement":null},{"id":"W2902019463","doi":"10.1172/jci124473","title":"Live attenuated varicella-zoster virus vaccine does not induce HIV target cell activation","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba; St. Michael's Hospital; University Health Network; University of Toronto","funders":"Canadian Institutes of Health Research; Sanofi Pasteur; King's College London; Pfizer; Ontario HIV Treatment Network; University of Manitoba; Sanofi; University of Toronto; GlaxoSmithKline","keywords":"Vaccination; Immunology; Varicella zoster virus; Medicine; Virology; Immune system; Virus","score_opus":0.07022546011626699,"score_gpt":0.3714066756111072,"score_spread":0.3011812154948402,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2902019463","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993093,0.000017135319,0.0009027306,0.0036645283,0.00091480004,0.00020229282,0.0000057022257,0.00002407406,0.0011757058],"genre_scores_gemma":[0.98877776,0.000051597613,0.0049659517,0.0030439273,0.0021455893,0.000003171582,0.000016936856,0.000022055809,0.00097300956],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99764687,0.00022410805,0.0014089019,0.0001993533,0.0003531184,0.00016764393],"domain_scores_gemma":[0.99707514,0.00032864322,0.0011457418,0.00020956718,0.00091266807,0.0003282444],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011196261,0.00015668558,0.00048392068,0.00016757843,0.00010760309,0.000033790162,0.000077000936,0.00025520803,0.0004506528],"category_scores_gemma":[0.001117889,0.00009983695,0.00019613003,0.00025434126,0.00011357528,0.00034345145,0.000025511123,0.0005448814,0.00033916847],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0031643265,0.0034397265,0.7934488,0.0001339192,0.0010905069,0.00013255322,0.0014896851,0.000037065467,0.14315848,0.000109371,0.019608324,0.034187242],"study_design_scores_gemma":[0.007965973,0.0032359269,0.45302194,0.0004681969,0.0005917295,0.00007246169,0.00011936305,0.00092255353,0.505646,0.0019061897,0.025804501,0.00024515888],"about_ca_topic_score_codex":0.000052068306,"about_ca_topic_score_gemma":0.000009462964,"teacher_disagreement_score":0.36248752,"about_ca_system_score_codex":0.00008742583,"about_ca_system_score_gemma":0.00028002853,"threshold_uncertainty_score":0.4934332},"labels":[],"label_agreement":null},{"id":"W2902472115","doi":"10.1172/jci123366","title":"Subdominance and poor intrinsic immunogenicity limit humoral immunity targeting influenza HA stem","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":102,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Infection and Immunity; National Health and Medical Research Council; Medical Research Council; Australian Government","keywords":"Biology; Immunogenicity; Hemagglutinin (influenza); Stem cell; Immunology; Virology; Vaccination; Immunity; Epitope; Immune system; Antibody; Antigen; Influenza vaccine; Cell biology","score_opus":0.23944098935478897,"score_gpt":0.4575142499984245,"score_spread":0.21807326064363552,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2902472115","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99536604,0.0020872585,0.000042726962,0.0015783261,0.00039715783,0.00022917044,0.000002787877,0.000017945295,0.00027861295],"genre_scores_gemma":[0.9899401,0.0005916051,0.0047475463,0.0031169015,0.0014850647,0.0000018752957,0.0000014813526,0.000018745292,0.000096662894],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9964009,0.0005047359,0.0020075792,0.00019369979,0.0005903537,0.00030274803],"domain_scores_gemma":[0.99553275,0.00090832985,0.001234116,0.00023952588,0.00171808,0.00036722526],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.005435343,0.00017327924,0.0007745869,0.00015815553,0.00022197743,0.000052225583,0.00017692642,0.00015686125,0.000029142031],"category_scores_gemma":[0.011351425,0.00013342682,0.00021327919,0.00028874126,0.0013951496,0.00043792409,0.00017872949,0.0011572097,0.000045098306],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004803924,0.00028173072,0.9120266,0.00021443445,0.00057340413,0.000093391835,0.0014110572,0.0000051401707,0.033000506,0.00041093727,0.0062406743,0.040938187],"study_design_scores_gemma":[0.0054270253,0.003245116,0.94364417,0.0006083643,0.00021037999,0.0001294568,0.0004282328,0.00036560989,0.031955212,0.0013819637,0.012396195,0.00020825381],"about_ca_topic_score_codex":0.000051628933,"about_ca_topic_score_gemma":0.000009994843,"teacher_disagreement_score":0.040729932,"about_ca_system_score_codex":0.00009125397,"about_ca_system_score_gemma":0.00044939297,"threshold_uncertainty_score":0.9969764},"labels":[],"label_agreement":null},{"id":"W2903326024","doi":"10.1172/jci122595","title":"Lipin 2/3 phosphatidic acid phosphatases maintain phospholipid homeostasis to regulate chylomicron synthesis","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Lipid metabolism and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Heart, Lung, and Blood Institute; National Institutes of Health","keywords":"Chylomicron; Phosphatidic acid; Biochemistry; Phospholipid; Enterocyte; Biology; Phosphatidylethanolamine; Cell biology; Chemistry; Lipoprotein; Very low-density lipoprotein; Phosphatidylcholine; Cholesterol; Small intestine; Membrane","score_opus":0.03310942295819737,"score_gpt":0.32846690266350415,"score_spread":0.2953574797053068,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2903326024","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940148,0.0016346197,0.0010269736,0.0014805899,0.0015230379,0.00017873563,0.000037117417,0.000012431981,0.00009166689],"genre_scores_gemma":[0.9753927,0.00078832323,0.01549958,0.0027642455,0.0053420058,0.00000853361,0.000025018755,0.000038648912,0.00014094124],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9969074,0.00033834222,0.0016310031,0.00039942708,0.0003803749,0.00034343326],"domain_scores_gemma":[0.99723214,0.0001828851,0.001023348,0.00047851278,0.000524076,0.0005590652],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0027899984,0.0002554859,0.0005935272,0.00012325603,0.00014028171,0.000068846086,0.00047656219,0.00031758833,0.000117141055],"category_scores_gemma":[0.0056456733,0.00020840009,0.00034749127,0.00027046635,0.0004045971,0.000033699635,0.00013682777,0.00020680852,0.000109898676],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018667311,0.00032097867,0.012779825,0.000048439426,0.0003738119,0.00001026432,0.00016701205,0.000013159255,0.66235787,0.0002351205,0.04543868,0.27638814],"study_design_scores_gemma":[0.0005326567,0.0006614268,0.021734105,0.000114250244,0.00011269018,0.000019536088,0.00005300979,0.00001013634,0.8409616,0.00021481616,0.13536103,0.00022476494],"about_ca_topic_score_codex":0.000012903442,"about_ca_topic_score_gemma":0.000016268967,"teacher_disagreement_score":0.27616337,"about_ca_system_score_codex":0.000025067962,"about_ca_system_score_gemma":0.00036233908,"threshold_uncertainty_score":0.8498309},"labels":[],"label_agreement":null},{"id":"W2909310706","doi":"10.1172/jci123959","title":"Loss of the sphingolipid desaturase DEGS1 causes hypomyelinating leukodystrophy","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Sphingolipid Metabolism and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":106,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster Children's Hospital","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Center for Advancing Translational Sciences; National Institute of Neurological Disorders and Stroke; National Human Genome Research Institute; European Regional Development Fund; Agència de Gestió d'Ajuts Universitaris i de Recerca; Canadian Institutes of Health Research; U.S. Navy; Intellectual and Developmental Disabilities Research Center; National Institutes of Health; Université Paris Diderot; Ministerio de Economía y Competitividad; Fondation pour la Recherche Médicale; Generalitat de Catalunya; Baylor-Hopkins Center for Mendelian Genomics; Agence Nationale de la Recherche; Instituto de Salud Carlos III; National Research Foundation; National Multiple Sclerosis Society; Fundación Hesperia; Center for Individualized Medicine, Mayo Clinic; Centres de Recerca de Catalunya; Ontario Genomics Institute; Howard Hughes Medical Institute; Georgia Clinical and Translational Science Alliance; Simons Foundation Autism Research Initiative; Génome Québec; Mayo Clinic; National Ataxia Foundation; Ontario Genomics; U.S. Department of Defense; Simons Foundation; Genome Canada; Yale University; Institut National de la Santé et de la Recherche Médicale; Johns Hopkins University; McGill University; European Commission; Broad Institute","keywords":"Sphingolipid; Leukodystrophy; Myelin; Fingolimod; Biology; Spasticity; Endoplasmic reticulum; Zebrafish; Neuroscience; Ceramide; Cell biology; Medicine; Internal medicine; Genetics; Multiple sclerosis; Immunology; Disease; Gene; Physical medicine and rehabilitation; Central nervous system","score_opus":0.03387428700805739,"score_gpt":0.32016787420756126,"score_spread":0.2862935871995039,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2909310706","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99747324,0.00038438672,0.0002395692,0.00027780546,0.0014265577,0.00009398139,0.000002877107,0.0000023604703,0.00009920954],"genre_scores_gemma":[0.9952313,0.00010683026,0.0024513092,0.00051864976,0.0015941192,6.269048e-7,0.0000037193042,0.0000134730735,0.00008001112],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980323,0.00025827065,0.0011453264,0.00014585133,0.00028811942,0.0001301751],"domain_scores_gemma":[0.99774915,0.0001558387,0.0013420575,0.00026178386,0.0003789757,0.00011219996],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016088627,0.00010708285,0.00032360008,0.000039335533,0.000045028308,0.000019087494,0.00030339483,0.00016414207,0.000010488123],"category_scores_gemma":[0.0028423204,0.00007090621,0.00032906546,0.00012610918,0.00017367964,0.000017553935,0.00010970516,0.00030597014,0.0000034667955],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000117285206,0.000044312535,0.26154205,0.000041898937,0.00007525712,0.0000015963808,0.00006403862,0.000917579,0.73474276,0.00023647038,0.0003897212,0.0018270471],"study_design_scores_gemma":[0.0024551009,0.0005507633,0.2628606,0.00029140624,0.0001470271,0.000076554716,0.00015318551,0.0004613659,0.7253471,0.0016365796,0.005794269,0.0002260214],"about_ca_topic_score_codex":0.000008410452,"about_ca_topic_score_gemma":0.0000032140813,"teacher_disagreement_score":0.009395611,"about_ca_system_score_codex":0.000007133811,"about_ca_system_score_gemma":0.00026459972,"threshold_uncertainty_score":0.3402728},"labels":[],"label_agreement":null},{"id":"W2909352392","doi":"10.1172/jci123267","title":"Reduced expression of phosphatase PTPN2 promotes pathogenic conversion of Tregs in autoimmunity","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Protein Tyrosine Phosphatases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute of Diabetes and Digestive and Kidney Diseases; National Center for Research Resources; Medical Research Council; Canadian Institutes of Health Research; University of California, San Diego; National Institutes of Health; National Institute of Allergy and Infectious Diseases; National Health and Medical Research Council; Narodowe Centrum Nauki; Rheumatology Research Foundation","keywords":"Autoimmunity; FOXP3; Immunology; Biology; Peripheral tolerance; Autoimmune disease; Cancer research; Immune system; Antibody","score_opus":0.03449056412691465,"score_gpt":0.32930145011024164,"score_spread":0.294810885983327,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2909352392","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962714,0.003097165,0.00004871895,0.0001017131,0.00022579862,0.0002020368,0.000026829613,0.0000018597839,0.000024485551],"genre_scores_gemma":[0.9967445,0.0002659319,0.0027494913,0.00005592674,0.00006937573,0.0000016149868,0.000081513965,0.000009646194,0.000022012535],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99781173,0.00032819854,0.0013780368,0.00014846878,0.00023100003,0.00010258378],"domain_scores_gemma":[0.9975901,0.00013090638,0.0016200942,0.00029753536,0.0002688662,0.000092451635],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016400118,0.0001015847,0.00040042298,0.00006956666,0.00001288587,0.0000045637044,0.00023164913,0.00019943182,0.000027812037],"category_scores_gemma":[0.0021637701,0.00008479503,0.00018160182,0.0001272221,0.0001831496,0.000025316627,0.00009080544,0.00022698585,0.0000024053218],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005436117,0.00017856415,0.06355431,0.000098357465,0.00001806966,0.0000022395986,0.000035887046,0.000052618423,0.93376964,0.000077725264,0.00030304157,0.0013659551],"study_design_scores_gemma":[0.0016624392,0.001105427,0.07420512,0.00034851502,0.000021038886,0.0000059211047,0.000039604518,0.00007388705,0.9218544,0.00042461604,0.00018415276,0.000074867465],"about_ca_topic_score_codex":0.000021060969,"about_ca_topic_score_gemma":0.0000012880984,"teacher_disagreement_score":0.011915217,"about_ca_system_score_codex":0.000010752522,"about_ca_system_score_gemma":0.00028763877,"threshold_uncertainty_score":0.3457841},"labels":[],"label_agreement":null},{"id":"W2911163118","doi":"10.1172/jci122622","title":"Inhibiting Wee1 and ATR kinases produces tumor-selective synthetic lethality and suppresses metastasis","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":133,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; University of Alberta; Alberta Cancer Foundation; Canadian Institutes of Health Research; Cancer Research Society; AstraZeneca","keywords":"Wee1; Synthetic lethality; Cancer research; Cancer cell; Cancer; DNA damage; Kinase; Mitosis; Metastasis; Biology; Cell cycle; DNA repair; Chemistry; Cell biology; Cyclin-dependent kinase 1; DNA; Biochemistry; Genetics","score_opus":0.03591855522157875,"score_gpt":0.3291808137633033,"score_spread":0.29326225854172455,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2911163118","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984356,0.00052479265,0.000052780706,0.00056903186,0.00015876665,0.00017086869,0.0000037016573,0.0000047693948,0.00007965328],"genre_scores_gemma":[0.99654055,0.00010540918,0.0027378679,0.00027264134,0.0002733882,0.0000029415087,0.000004211374,0.000011188902,0.000051776933],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99849594,0.00032656628,0.00064569595,0.0002521347,0.00016722648,0.00011246363],"domain_scores_gemma":[0.998694,0.00020898746,0.00061288953,0.00012678368,0.00022244373,0.00013488701],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001690862,0.00010644552,0.00028807615,0.000038186245,0.00003934198,0.00003871039,0.00007434591,0.00009489801,0.0000063543152],"category_scores_gemma":[0.0031345142,0.000086948996,0.00008787302,0.000055912962,0.00017486332,0.000025202598,0.00007430016,0.00019077439,0.0000015232035],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015656096,0.00006752499,0.09580638,0.000099277,0.000120636185,0.0000069350585,0.000072706396,0.000019252635,0.89900583,0.00019304208,0.00035563463,0.0040961895],"study_design_scores_gemma":[0.00056296325,0.0010585978,0.033628006,0.00013715538,0.00008707204,0.00011651395,0.00013315465,0.000058787136,0.96020067,0.0031986437,0.00068885327,0.00012958748],"about_ca_topic_score_codex":0.0000067821843,"about_ca_topic_score_gemma":0.00000489392,"teacher_disagreement_score":0.062178377,"about_ca_system_score_codex":0.000005690413,"about_ca_system_score_gemma":0.00010722595,"threshold_uncertainty_score":0.3752533},"labels":[],"label_agreement":null},{"id":"W2912325278","doi":"10.1172/jci123931","title":"Virus-mediated delivery of antibody targeting TAR DNA-binding protein-43 mitigates associated neuropathology","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Amyotrophic Lateral Sclerosis Research","field":"Medicine","cited_by":82,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Johns Hopkins University; Canadian Institutes of Health Research; Faculté de Médecine, Université Laval; Université Laval","keywords":"Neuroinflammation; Amyotrophic lateral sclerosis; Neuropathology; Antibody; Frontotemporal dementia; Biology; Transgene; Virology; Cancer research; Immunology; Medicine; Dementia; Gene; Pathology; Inflammation; Genetics; Disease","score_opus":0.06360490847107622,"score_gpt":0.377783688119841,"score_spread":0.3141787796487647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2912325278","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970636,0.0000742629,0.000013163459,0.0018517382,0.00041506274,0.00044957362,0.000010016446,0.000022741233,0.000099874174],"genre_scores_gemma":[0.99722344,0.00017036306,0.0015137333,0.00043382196,0.00036173756,0.0000021947255,0.00006455047,0.000033099823,0.00019708562],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9951774,0.00094270246,0.0024285065,0.00025096643,0.0008657474,0.000334701],"domain_scores_gemma":[0.9950834,0.0010360372,0.0021599806,0.00019955367,0.0011188915,0.000402161],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0042287875,0.00017116714,0.00097102486,0.0002405704,0.000051676674,0.000022542305,0.00021451451,0.00034562478,0.00021596746],"category_scores_gemma":[0.012658818,0.0001318671,0.00033842388,0.00043474627,0.00035024845,0.0003359546,0.000083666804,0.001173933,0.00009826707],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026675742,0.00014923156,0.29915014,0.00006369372,0.000087819244,0.000065794746,0.00006289245,0.000013212572,0.6996701,0.00001554256,0.00022947123,0.00022538388],"study_design_scores_gemma":[0.004601082,0.0033377726,0.87057585,0.0014568111,0.00015162533,0.00005324491,0.00006720638,0.0020828282,0.11680644,0.0004052808,0.00026330215,0.00019857178],"about_ca_topic_score_codex":0.000026620695,"about_ca_topic_score_gemma":0.0000017579229,"teacher_disagreement_score":0.5828636,"about_ca_system_score_codex":0.00009609968,"about_ca_system_score_gemma":0.0004853936,"threshold_uncertainty_score":0.995658},"labels":[],"label_agreement":null},{"id":"W2912925337","doi":"10.1172/jci125980","title":"Ulk1/Rab9-mediated alternative mitophagy confers cardioprotection during energy stress","year":2019,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Boniface Hospital","funders":"Canadian Institutes of Health Research","keywords":"Mitophagy; Cardioprotection; ULK1; Stress (linguistics); Autophagy; Medicine; Biology; Cell biology; Internal medicine; Ischemia; Biochemistry; Kinase","score_opus":0.05551144062152267,"score_gpt":0.3493674525936576,"score_spread":0.2938560119721349,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2912925337","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.82672316,0.0012020622,0.00044413077,0.16344035,0.0069042603,0.0005480367,0.00007929452,0.00006186478,0.0005968353],"genre_scores_gemma":[0.4416433,0.002555779,0.00037386565,0.49166757,0.058444038,0.000026262562,0.0006929969,0.00018695531,0.0044092387],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99535066,0.00061220984,0.0022402413,0.0003850183,0.0011074552,0.00030439714],"domain_scores_gemma":[0.994682,0.00077310216,0.0029687502,0.00040387537,0.000874638,0.00029762092],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.00078133115,0.00036602304,0.0014847819,0.00039810396,0.000065486274,0.000048485606,0.00024482887,0.0013199856,0.00014624611],"category_scores_gemma":[0.0013788705,0.00029887332,0.0009778157,0.0002081903,0.00027910358,0.0002579785,0.00003399128,0.0033005197,0.000050067858],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0041095517,0.00058042357,0.044892285,0.0020886227,0.010266103,0.009746664,0.00047818065,0.0005773894,0.008500891,0.00008855547,0.9106687,0.008002666],"study_design_scores_gemma":[0.032246273,0.0070034927,0.12872803,0.009475681,0.004122848,0.0020411448,0.00018742794,0.0020871924,0.10693148,0.007137917,0.69801474,0.0020237823],"about_ca_topic_score_codex":0.000066095,"about_ca_topic_score_gemma":0.0000015662507,"teacher_disagreement_score":0.3850799,"about_ca_system_score_codex":0.00017868688,"about_ca_system_score_gemma":0.0008204524,"threshold_uncertainty_score":0.9999765},"labels":[],"label_agreement":null},{"id":"W2913110287","doi":"10.1172/jci124516","title":"Dynamic ploidy changes drive fluconazole resistance in human cryptococcal meningitis","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":168,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Medical Research Council; Wellcome Trust; Wellcome","keywords":"Cryptococcal meningitis; Fluconazole; Cryptococcosis; Meningitis; Cryptococcus neoformans; Resistance (ecology); Ploidy; Microbiology; Medicine; Immunology; Biology; Antifungal; Human immunodeficiency virus (HIV); Genetics; Surgery; Viral disease; Ecology; Gene","score_opus":0.05292326369605098,"score_gpt":0.38591546201775956,"score_spread":0.33299219832170857,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2913110287","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992317,0.00033250818,0.00003481522,0.0042697466,0.00045318372,0.00020795513,0.0000014856154,0.000011362827,0.0023719512],"genre_scores_gemma":[0.9958502,0.00013608793,0.0023108884,0.000386481,0.00025187884,0.0000051896996,0.000004584527,0.000011034648,0.0010436754],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99839115,0.00011302429,0.0009761987,0.0001387522,0.00024705438,0.00013381624],"domain_scores_gemma":[0.9986956,0.00031213736,0.00052934064,0.00012548993,0.00020025311,0.00013717196],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010426776,0.00009602116,0.00051632215,0.00016468998,0.00004938358,0.000016004395,0.000059668877,0.00012364636,0.00006089114],"category_scores_gemma":[0.000745311,0.00007715457,0.00014182382,0.00019334091,0.00013806898,0.00013618395,0.000021859354,0.00054584583,0.000021210182],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003003146,0.00027118908,0.94875485,0.00012009093,0.00015828287,0.00008496461,0.0006981898,0.000040601088,0.043498784,0.002288151,0.0025652864,0.0012192889],"study_design_scores_gemma":[0.0028386882,0.0013400925,0.9828613,0.00080094987,0.000070786045,0.000034228306,0.00021972282,0.00047122894,0.0014584104,0.0059427777,0.0038482219,0.00011363319],"about_ca_topic_score_codex":0.000012916845,"about_ca_topic_score_gemma":0.00028265957,"teacher_disagreement_score":0.04204037,"about_ca_system_score_codex":0.00007948193,"about_ca_system_score_gemma":0.00010111706,"threshold_uncertainty_score":0.3146272},"labels":[],"label_agreement":null},{"id":"W2913288555","doi":"10.1172/jci120412","title":"Abolition of aberrant neurogenesis ameliorates cognitive impairment after stroke in mice","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Neurogenesis and neuroplasticity mechanisms","field":"Neuroscience","cited_by":127,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"Canadian Institutes of Health Research; Instituto de Salud Carlos III; Ministerio de Economía y Competitividad","keywords":"Neurogenesis; Hippocampal formation; Neuroscience; Stroke (engine); Hippocampus; Forgetting; Psychology; Memory impairment; Memantine; Neural stem cell; Cognition; Doublecortin; Medicine; Dentate gyrus; Dementia; Internal medicine; Biology; Disease; Stem cell; Cognitive psychology","score_opus":0.06731522080757667,"score_gpt":0.341246545330423,"score_spread":0.2739313245228463,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2913288555","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984786,0.0000320691,0.00007794258,0.00019337673,0.00088680995,0.00025462874,0.000022407512,0.0000076160877,0.000046528192],"genre_scores_gemma":[0.9980422,0.00018296747,0.00018383558,0.0014056165,0.00012611372,0.000004736262,7.256723e-7,0.000018504817,0.000035274603],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9965234,0.00078287424,0.0016947559,0.00028163425,0.0005267568,0.0001905783],"domain_scores_gemma":[0.99649817,0.0017194086,0.0012749908,0.000112785194,0.00021905468,0.0001755666],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009864629,0.00014608601,0.000498513,0.00023365335,0.000020465233,0.00002567059,0.00016709963,0.0000994561,0.00006391668],"category_scores_gemma":[0.0020608504,0.00012276147,0.00023170558,0.00032003646,0.00014003922,0.00033578297,0.000042760596,0.00033627235,0.000041251154],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00078893045,0.0003312037,0.07260537,0.000041131723,0.000008522323,0.000072856135,0.00009211974,0.00013300253,0.9251871,0.0002480424,0.000014132215,0.00047758152],"study_design_scores_gemma":[0.001284954,0.001167155,0.2152681,0.00016559962,0.000038312133,0.00003947072,0.000035604888,0.0005740952,0.7808842,0.00043502724,0.000021019596,0.00008644883],"about_ca_topic_score_codex":0.0000053393996,"about_ca_topic_score_gemma":0.000003199543,"teacher_disagreement_score":0.14430289,"about_ca_system_score_codex":0.000016089858,"about_ca_system_score_gemma":0.00014515697,"threshold_uncertainty_score":0.5006068},"labels":[],"label_agreement":null},{"id":"W2914282788","doi":"10.1172/jci96313","title":"Spatially distinct tumor immune microenvironments stratify triple-negative breast cancers","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cancer Immunotherapy and Biomarkers","field":"Medicine","cited_by":427,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Cancer Research; Ontario Institute for Cancer Research; McGill University Health Centre; Montreal Neurological Institute and Hospital; University of Toronto; Centre Hospitalier de l’Université de Montréal; McGill University; Princess Margaret Cancer Centre; Occupational Cancer Research Centre","funders":"Merck Sharp and Dohme; National Cancer Institute; National Institutes of Health; University of Toronto; Québec Consortium for Drug Discovery; Ohio State University; McGill University Health Centre; Stand Up To Cancer; Faculty of Medicine, McGill University; McGill University; Deutsches Krebsforschungszentrum","keywords":"Stromal cell; Tumor microenvironment; Granzyme B; Triple-negative breast cancer; Immune system; Cancer research; CD8; Cytotoxic T cell; Biology; Granzyme; Laser capture microdissection; Immune checkpoint; Immunology; Breast cancer; Immunotherapy; Cancer; Gene expression; Perforin","score_opus":0.03719470121437023,"score_gpt":0.3412165992050687,"score_spread":0.30402189799069845,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2914282788","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953357,0.00023836379,0.000071177994,0.0022609073,0.0012502659,0.00035620478,0.000017965787,0.000008537908,0.00046084909],"genre_scores_gemma":[0.9957467,0.00015855435,0.0015920958,0.0013133634,0.0005646696,0.0000024639962,0.000014364965,0.000018831415,0.00058898114],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99725074,0.00018827766,0.0017516426,0.00018304857,0.00045787115,0.00016845163],"domain_scores_gemma":[0.99752915,0.00028005638,0.0015838038,0.00020852646,0.00016433255,0.00023411367],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001316255,0.000153728,0.00061547774,0.00007943972,0.00004175158,0.000026517693,0.00013237004,0.000111058114,0.0006828818],"category_scores_gemma":[0.00040967914,0.000116118834,0.00038624826,0.0001518962,0.00029058047,0.00023230887,0.000018412316,0.00051944616,0.000043076358],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.013424336,0.0003753581,0.8071391,0.0001339003,0.0009958837,0.00008537944,0.0003695806,0.000059582813,0.13019292,0.000034886045,0.0026379724,0.044551127],"study_design_scores_gemma":[0.008204567,0.0016897235,0.97864753,0.0004852949,0.00016258369,0.000266917,0.00010588626,0.00022477892,0.008275257,0.00032157823,0.00148283,0.00013305411],"about_ca_topic_score_codex":0.00018078646,"about_ca_topic_score_gemma":0.000029343832,"teacher_disagreement_score":0.17150846,"about_ca_system_score_codex":0.00023484025,"about_ca_system_score_gemma":0.0007865246,"threshold_uncertainty_score":0.74770766},"labels":[],"label_agreement":null},{"id":"W2922538610","doi":"10.1172/jci125534","title":"Heroin addiction engages negative emotional learning brain circuits in rats","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Neurotransmitter Receptor Influence on Behavior","field":"Neuroscience","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute on Drug Abuse; Canadian Institutes of Health Research; National Institutes of Health; George Mason University","keywords":"Heroin; Amygdala; Functional magnetic resonance imaging; Abstinence; Addiction; Psychology; Opioid; Neuroscience; Opioid use disorder; Affect (linguistics); Medicine; Psychiatry; Drug; Internal medicine; Receptor","score_opus":0.1149252865583629,"score_gpt":0.3809536281211717,"score_spread":0.26602834156280875,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2922538610","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99504435,0.000010621023,0.00008949051,0.0031955135,0.0011334476,0.00024132755,0.0000023293678,0.000025608013,0.00025730592],"genre_scores_gemma":[0.9963215,0.000033996603,0.00029004324,0.002749171,0.00028704197,0.000003682966,0.0000013421878,0.000019991632,0.00029325052],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9952692,0.0020128551,0.0015440829,0.0003126043,0.0006566155,0.00020467842],"domain_scores_gemma":[0.99540854,0.0030019982,0.001113352,0.00012680377,0.00015188273,0.00019745778],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0025149726,0.00014452788,0.0003815183,0.00024659064,0.000069856455,0.00006524339,0.00025111774,0.0001550016,0.0003162194],"category_scores_gemma":[0.009281625,0.00013331173,0.0001871535,0.0004467631,0.00020655627,0.001019718,0.00002342063,0.0017331502,0.00019321745],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006927327,0.0001390789,0.23783304,0.000013005409,0.0000054211364,0.00003917185,0.0004976978,0.0019606142,0.74077547,0.00026027448,0.0004384671,0.017968517],"study_design_scores_gemma":[0.0023833504,0.0010314314,0.69704235,0.00044003458,0.000019476262,0.00010443542,0.000094132,0.0011856739,0.29288986,0.0027171916,0.0018531767,0.00023891944],"about_ca_topic_score_codex":0.0000041390745,"about_ca_topic_score_gemma":0.000002908799,"teacher_disagreement_score":0.4592093,"about_ca_system_score_codex":0.000066067056,"about_ca_system_score_gemma":0.0002141084,"threshold_uncertainty_score":0.9990636},"labels":[],"label_agreement":null},{"id":"W2924316526","doi":"10.1172/jci125301","title":"Failed immune responses across multiple pathologies share pan-tumor and circulating lymphocytic targets","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cancer Immunotherapy and Biomarkers","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Toronto Western Hospital; McGill University; McGill University Health Centre; Université de Montréal; Jewish General Hospital","funders":"National Heart, Lung, and Blood Institute; Natural Sciences and Engineering Research Council of Canada; Krembil Foundation; Institut Du Cancer de Montréal; Institute of Cancer Research; Terry Fox Research Institute; Canadian Cancer Society Research Institute; Canadian Institutes of Health Research; Fonds de Recherche du Québec - Santé; Mitacs; Lady Davis Institute for Medical Research; Qatar University; McGill University; Kidney Foundation of Canada; Society for Immunotherapy of Cancer","keywords":"Immune system; Context (archaeology); Immunology; Cancer; Immunogenicity; Tumor-infiltrating lymphocytes; Disease; Biology; Immunotherapy; Medicine; Pathology; Genetics","score_opus":0.08151032616132131,"score_gpt":0.3913902125593313,"score_spread":0.30987988639801,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2924316526","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961198,0.0019731352,0.00003084032,0.0010378889,0.00056005036,0.00022007467,0.000009261508,0.000019628089,0.000029298179],"genre_scores_gemma":[0.9961758,0.00025967302,0.0020559703,0.0010980448,0.00024974142,0.000002401877,0.000008273448,0.00001495513,0.00013511177],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977412,0.0002307703,0.0014024527,0.00017211221,0.00027908693,0.00017433774],"domain_scores_gemma":[0.9972155,0.0011827452,0.0010417968,0.00018411712,0.00024761318,0.00012823782],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025157174,0.000122374,0.0005583569,0.00006364825,0.00007018963,0.000046110225,0.000085317675,0.00013387771,0.0000594443],"category_scores_gemma":[0.0054410174,0.000089558205,0.0002361503,0.00012858499,0.00024155964,0.0002481801,0.000038925846,0.00031900156,0.0000107614605],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004785463,0.00005132556,0.8479864,0.00012278638,0.00013706212,0.00009087388,0.0006661819,0.000015632908,0.12673935,0.00000520338,0.0001511573,0.01924857],"study_design_scores_gemma":[0.006899016,0.00096165965,0.9799222,0.0006109565,0.000055642144,0.0003268078,0.00074983743,0.0011145681,0.008345783,0.0002396907,0.00066342903,0.00011045804],"about_ca_topic_score_codex":0.0000232689,"about_ca_topic_score_gemma":0.0000039691954,"teacher_disagreement_score":0.13193576,"about_ca_system_score_codex":0.00010596971,"about_ca_system_score_gemma":0.00040187984,"threshold_uncertainty_score":0.6513799},"labels":[],"label_agreement":null},{"id":"W2927243788","doi":"10.1172/jci124358","title":"Cross-reactive public TCR sequences undergo positive selection in the human thymic repertoire","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Lymphatic System and Diseases","field":"Medicine","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institute of Diabetes and Digestive and Kidney Diseases; NIH Office of the Director; University of British Columbia; Human Islet Research Network; Massachusetts Institute of Technology; National Cancer Institute; National Institutes of Health; National Center for Research Resources; American Diabetes Association","keywords":"Negative selection; Complementarity determining region; T-cell receptor; Biology; Repertoire; Thymocyte; Genetics; Positive selection; T cell; Immunology; Gene; Peptide sequence; Immune system; Genome","score_opus":0.10368594887854125,"score_gpt":0.42211580882517546,"score_spread":0.3184298599466342,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2927243788","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99159616,0.00012395467,0.000026732243,0.005136715,0.000299689,0.00028265736,0.0000012808978,0.000009354911,0.0025234572],"genre_scores_gemma":[0.9968849,0.000016672035,0.000118443975,0.0020885954,0.0005986428,0.000003607312,0.00000864098,0.000007948423,0.00027258886],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99745554,0.00055982947,0.0011873553,0.00015656956,0.000508862,0.0001318227],"domain_scores_gemma":[0.99729544,0.001009444,0.0009499831,0.00012320624,0.00045614768,0.00016579164],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002461389,0.00009812375,0.00038084554,0.00012921495,0.000077055316,0.00008803852,0.00012631217,0.00013639586,0.000073463685],"category_scores_gemma":[0.0026209648,0.000057403453,0.00020467579,0.00029587542,0.00020010695,0.0005461708,0.000010947933,0.00016786136,0.000026598138],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012452868,0.00018565916,0.9928622,0.00003591164,0.00006664315,0.000024204148,0.00046459926,0.00001602814,0.0039081434,0.0012229929,0.00036858922,0.0007205008],"study_design_scores_gemma":[0.0020626371,0.0008846538,0.98808676,0.00039816098,0.000084883955,0.00027942093,0.0008914738,0.00019376463,0.0009173861,0.0060020713,0.000130179,0.00006858955],"about_ca_topic_score_codex":0.00006703432,"about_ca_topic_score_gemma":0.00002527067,"teacher_disagreement_score":0.0052887015,"about_ca_system_score_codex":0.00013496724,"about_ca_system_score_gemma":0.00076440093,"threshold_uncertainty_score":0.3137729},"labels":[],"label_agreement":null},{"id":"W2929664648","doi":"10.1172/jci123454","title":"The gliotransmitter ACBP controls feeding and energy homeostasis via the melanocortin system","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Regulation of Appetite and Obesity","field":"Neuroscience","cited_by":83,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier de l'Université Laval; Centre hospitalier universitaire de Québec; Centre Hospitalier de l’Université de Montréal","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; LabEx BRAIN; Société Francophone du Diabète; Université Paris Diderot; Agence Nationale de la Recherche; Institut National de la Recherche Agronomique; Institut National de la Santé et de la Recherche Médicale; Diabetes Canada; Diabète Québec","keywords":"Melanocortin; Energy homeostasis; Endocrinology; Internal medicine; Hypothalamus; Proopiomelanocortin; Arcuate nucleus; Arc (geometry); Anorectic; Melanocortin 4 receptor; Biology; Astrocyte; Homeostasis; Central nervous system; Chemistry; Hormone; Medicine; Body weight; Obesity","score_opus":0.04348003032928068,"score_gpt":0.3094163018950049,"score_spread":0.26593627156572425,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2929664648","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98653,0.00015484504,0.0007666196,0.011217351,0.0007492917,0.00009060382,8.5656814e-7,0.000010501437,0.00047990942],"genre_scores_gemma":[0.9970719,0.00020589042,0.0000803341,0.0019456205,0.00045923732,0.000001528498,1.9572761e-7,0.00000740553,0.00022784753],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99777246,0.000514306,0.0010320581,0.00014150847,0.00040708506,0.00013258982],"domain_scores_gemma":[0.99610484,0.0024946246,0.0009881952,0.00016688686,0.00012218983,0.00012328621],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002339664,0.000086898726,0.0002530542,0.00003819884,0.00022219366,0.00015535115,0.00021072055,0.00008709435,0.000007781041],"category_scores_gemma":[0.00094187574,0.000042610944,0.000146588,0.00013876232,0.00023270697,0.0002831811,0.000028410159,0.0002827868,0.0000151756785],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012012519,0.00012937204,0.2004437,0.00014339465,0.00014850697,0.000054158623,0.0008237608,0.0006743799,0.50866437,0.12113953,0.0047566355,0.16182096],"study_design_scores_gemma":[0.004480583,0.0011738731,0.6277725,0.0004433306,0.00020733694,0.00052471395,0.00059712294,0.030665824,0.22655512,0.019306622,0.08785362,0.00041935468],"about_ca_topic_score_codex":0.0000065046493,"about_ca_topic_score_gemma":0.0000034838458,"teacher_disagreement_score":0.4273288,"about_ca_system_score_codex":0.000016630316,"about_ca_system_score_gemma":0.000053556512,"threshold_uncertainty_score":0.17376238},"labels":[],"label_agreement":null},{"id":"W2936477178","doi":"10.1172/jci79990","title":"ATP6AP2 variant impairs CNS development and neuronal survival to cause fulminant neurodegeneration","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto; SickKids Foundation; Mount Sinai Hospital","funders":"NIH Clinical Center; Japan Science and Technology Agency; National Institutes of Health; National Institute of Neurological Disorders and Stroke; Tohoku Medical and Pharmaceutical University; Universität des Saarlandes; Centre National de la Recherche Scientifique; Agence Nationale de la Recherche; Universität Zürich; Eunice Kennedy Shriver National Institute of Child Health and Human Development; European Commission; Fondation pour la Recherche Médicale; Institut National de la Santé et de la Recherche Médicale","keywords":"Neurodegeneration; Fulminant; Biology; Medicine; Neuroscience; Bioinformatics; Immunology; Pathology; Disease","score_opus":0.058714423563480875,"score_gpt":0.3302542100886394,"score_spread":0.27153978652515853,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2936477178","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99223536,0.000030513005,0.0040550297,0.0009234218,0.0025215764,0.00012532496,0.0000020204652,0.0000033265705,0.00010342385],"genre_scores_gemma":[0.9866147,0.000051766525,0.00927609,0.002165375,0.0012234166,0.0000026222103,0.000026672591,0.000014663102,0.0006247178],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984273,0.00027075817,0.0007962031,0.00021551631,0.0001741006,0.00011616684],"domain_scores_gemma":[0.9990279,0.000068519395,0.0003408818,0.00013490536,0.0001860237,0.00024177843],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010333684,0.00010039473,0.00022129057,0.000055843175,0.000042523807,0.000025202557,0.00008371958,0.00014466896,0.00002564435],"category_scores_gemma":[0.0007858025,0.00008335878,0.000073852745,0.000064807675,0.000042820273,0.000011280363,0.00004995862,0.00017268832,0.000026328538],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008046145,0.0001168741,0.09603082,0.000023813245,0.000087893684,0.000029543982,0.00022626237,0.0008704619,0.88657475,0.0008336674,0.005527279,0.008874011],"study_design_scores_gemma":[0.0035433543,0.0056774393,0.59402364,0.000070039474,0.000098467994,0.00044473325,0.000099570745,0.00065047666,0.19451098,0.00036964423,0.2000097,0.0005019835],"about_ca_topic_score_codex":0.0000020523487,"about_ca_topic_score_gemma":0.000019623782,"teacher_disagreement_score":0.6920638,"about_ca_system_score_codex":0.0000075454304,"about_ca_system_score_gemma":0.00025670114,"threshold_uncertainty_score":0.33992723},"labels":[],"label_agreement":null},{"id":"W2943449347","doi":"10.1172/jci127195","title":"Aberrant splicing contributes to severe α-spectrin–linked congenital hemolytic anemia","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Erythrocyte Function and Pathophysiology","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto; SickKids Foundation; University of Manitoba","funders":"National Institute of General Medical Sciences; Yale University; National Institutes of Health; National Cancer Institute; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; Raymond and Beverly Sackler Institute for Biological, Physical and Engineering Sciences, Yale University","keywords":"Spectrin; RNA splicing; Hemolytic anemia; Genetics; Biology; Anemia; Medicine; Immunology; Computational biology; Virology; Gene; Internal medicine; RNA","score_opus":0.054068940630674855,"score_gpt":0.3502233516277379,"score_spread":0.296154410997063,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2943449347","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99012417,0.000110143825,0.00048563586,0.0061662844,0.0018657574,0.00032237143,0.0000020655423,0.000021509393,0.0009020469],"genre_scores_gemma":[0.98611677,0.000046209945,0.0018998809,0.009683515,0.0009871045,0.0000015042065,0.00000960113,0.000015081817,0.0012403422],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99779236,0.00015292213,0.0014019113,0.00019091464,0.00027763972,0.00018426603],"domain_scores_gemma":[0.99753946,0.0007333857,0.0006115816,0.00019946905,0.00051950815,0.00039661906],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011559959,0.00013041325,0.0007319089,0.0001538286,0.00003570612,0.000018095698,0.00008905447,0.00022829438,0.00020041798],"category_scores_gemma":[0.0021225766,0.00010033765,0.00026969853,0.00023994404,0.000093753406,0.0001249159,0.000024892694,0.0006607939,0.00035469895],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0055096946,0.0003558118,0.63668495,0.00021978232,0.00047412748,0.00017535001,0.00036916154,0.00042187312,0.32791075,0.002297496,0.017709527,0.007871438],"study_design_scores_gemma":[0.01118194,0.0047891843,0.95823544,0.00060035294,0.00039034645,0.00078847725,0.00020930702,0.0013413032,0.008103894,0.0047304626,0.009374862,0.00025440415],"about_ca_topic_score_codex":0.000007676915,"about_ca_topic_score_gemma":0.0000041448093,"teacher_disagreement_score":0.3215505,"about_ca_system_score_codex":0.00007372772,"about_ca_system_score_gemma":0.0003574526,"threshold_uncertainty_score":0.45590556},"labels":[],"label_agreement":null},{"id":"W2943584880","doi":"10.1172/jci123689","title":"CB1 agonism prolongs therapeutic window for hormone replacement in ovariectomized mice","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Neurogenesis and neuroplasticity mechanisms","field":"Neuroscience","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Toronto; National Natural Science Foundation of China","keywords":"Ovariectomized rat; Agonist; Cannabinoid receptor; Internal medicine; Endocrinology; Medicine; Estrogen; Hormone; Menopause; Extinction (optical mineralogy); Cannabinoid; Downregulation and upregulation; Receptor; Chemistry","score_opus":0.11320208229566504,"score_gpt":0.3667983642229662,"score_spread":0.25359628192730116,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2943584880","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952957,0.000035152883,0.0013443854,0.0012376985,0.0013036877,0.00070875563,0.0000032031746,0.000014808564,0.00005661534],"genre_scores_gemma":[0.9938435,0.000092260845,0.0013061351,0.0043532215,0.00023265113,0.000013626502,7.916368e-7,0.000024162022,0.00013363211],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99682474,0.0006045129,0.0015755474,0.00033577753,0.00043035124,0.00022904569],"domain_scores_gemma":[0.9955891,0.0027279381,0.0012046576,0.0001900588,0.00012582054,0.00016242743],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002356206,0.0001464425,0.0005192248,0.00014003168,0.00005045856,0.000056907345,0.00026378487,0.00012416505,0.000018248393],"category_scores_gemma":[0.003769748,0.0001172663,0.00023359043,0.00022381227,0.00008972057,0.00028489353,0.00003590328,0.00041732338,0.000028102171],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002490269,0.00018011815,0.0026153245,0.000018959117,0.000009743598,0.00001279458,0.00006543728,0.00012009806,0.9915797,0.0019916696,0.000099367186,0.00081648724],"study_design_scores_gemma":[0.009299159,0.0032944551,0.019232485,0.00006337178,0.000050482424,0.00006126375,0.000013993818,0.0044624126,0.95494413,0.0067573064,0.0016575569,0.0001633627],"about_ca_topic_score_codex":0.0000020721604,"about_ca_topic_score_gemma":0.0000013537251,"teacher_disagreement_score":0.03663558,"about_ca_system_score_codex":0.00002822802,"about_ca_system_score_gemma":0.00019152845,"threshold_uncertainty_score":0.4781981},"labels":[],"label_agreement":null},{"id":"W2945937650","doi":"10.1172/jci124012","title":"Enhanced glycolytic metabolism supports transmigration of brain-infiltrating macrophages in multiple sclerosis","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune cells in cancer","field":"Immunology and Microbiology","cited_by":138,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Alberta Children's Hospital; Hotchkiss Brain Institute","funders":"Canadian Institutes of Health Research; Alberta Innovates; Alberta Innovates - Health Solutions","keywords":"Glycolysis; Multiple sclerosis; Metabolism; Medicine; Neuroscience; Immunology; Pathology; Biology; Biochemistry","score_opus":0.0544415034306928,"score_gpt":0.3161607105607375,"score_spread":0.2617192071300447,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2945937650","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951573,0.0012360008,0.00050696265,0.0006110866,0.0021081627,0.00022961621,0.0000044112458,0.000007699714,0.0001387837],"genre_scores_gemma":[0.9979559,0.000198881,0.001008122,0.0003903146,0.00008853412,0.0000034136388,0.000014201983,0.000013754338,0.00032683046],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968036,0.00053763157,0.002196726,0.00017219722,0.000102320075,0.0001875576],"domain_scores_gemma":[0.9964909,0.001478232,0.0015705943,0.0001841511,0.00024264351,0.00003350849],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022004803,0.00013051103,0.0006656183,0.0001615138,0.000032019285,0.000010554252,0.0001908575,0.00031271778,0.00033767344],"category_scores_gemma":[0.0016819941,0.00011301622,0.00024103296,0.00021552797,0.00025924234,0.00032404027,0.000018438726,0.0006188193,0.00004408525],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029914326,0.00009617259,0.03012479,0.000046467,0.00008033309,0.0000015156471,0.0007475587,0.00034699787,0.9601106,0.0001079348,0.0004172462,0.007621266],"study_design_scores_gemma":[0.0036160755,0.00034553508,0.2180673,0.00031216812,0.0000526151,0.00001289683,0.000171273,0.00010040239,0.7761626,0.00044311702,0.00060618226,0.000109804234],"about_ca_topic_score_codex":0.000048331396,"about_ca_topic_score_gemma":0.00003807658,"teacher_disagreement_score":0.18794252,"about_ca_system_score_codex":0.000031480897,"about_ca_system_score_gemma":0.00025570966,"threshold_uncertainty_score":0.46086675},"labels":[],"label_agreement":null},{"id":"W2947937089","doi":"10.1172/jci125957","title":"CD161 contributes to prenatal immune suppression of IFN-γ–producing PLZF+ T cells","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Reproductive System and Pregnancy","field":"Immunology and Microbiology","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Child Health and Human Development; National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Allergy and Infectious Diseases; University of California, San Francisco; Academy of Medical Sciences; National Institutes of Health; National Science Foundation","keywords":"Immunology; Immune system; Biology; Fetus; Population; Cord blood; T cell; Inflammation; Medicine; Pregnancy","score_opus":0.03484036600068894,"score_gpt":0.3267005005107754,"score_spread":0.29186013451008647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2947937089","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.987793,0.0047416543,0.00023251797,0.0009114364,0.0056894994,0.00034731106,0.000010701969,0.000009062479,0.00026477536],"genre_scores_gemma":[0.99796104,0.000046660592,0.00048368223,0.00011808465,0.00020497497,0.0000020663394,0.0000125237275,0.000009230291,0.0011617264],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968155,0.0006843952,0.001974488,0.0002610689,0.000091311966,0.00017321351],"domain_scores_gemma":[0.9967966,0.0006878421,0.0015249364,0.00037802727,0.00055881887,0.000053757714],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0030827443,0.00012558444,0.0007408904,0.00013614762,0.000043285232,0.000011450058,0.00026094017,0.0002643472,0.00015220343],"category_scores_gemma":[0.0022830672,0.000092166054,0.00024732342,0.00016330222,0.00016648331,0.00023566622,0.000076199394,0.00044563654,0.00020746088],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003067811,0.00009168169,0.094242536,0.000096164644,0.00017487087,0.0000016721898,0.00044098485,0.000121564,0.8982352,0.00022099612,0.003223637,0.0028438922],"study_design_scores_gemma":[0.0015054055,0.00070736144,0.17732441,0.0011278772,0.000053754502,0.000024110564,0.00009198024,0.000002244862,0.8141225,0.000852889,0.004097362,0.000090108144],"about_ca_topic_score_codex":0.000023394114,"about_ca_topic_score_gemma":0.0000011698365,"teacher_disagreement_score":0.08411273,"about_ca_system_score_codex":0.000018805358,"about_ca_system_score_gemma":0.00016350864,"threshold_uncertainty_score":0.37584227},"labels":[],"label_agreement":null},{"id":"W2948057470","doi":"10.1172/jci127307","title":"Autophagy is required for lung development and morphogenesis","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; SickKids Foundation; Hospital for Sick Children","funders":"Canadian Institutes of Health Research; Hospital for Sick Children","keywords":"Bronchopulmonary dysplasia; Autophagy; Lung; BECN1; Biology; Cell biology; Morphogenesis; AMPK; Respiratory distress; Pathology; Immunology; Medicine; Internal medicine; Apoptosis; Gestational age; Genetics; Pregnancy","score_opus":0.08649733445057324,"score_gpt":0.40042435844838065,"score_spread":0.3139270239978074,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2948057470","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995979,0.0007655484,0.0006931904,0.0018137754,0.00039387037,0.00025685434,0.0000017360304,0.000008607044,0.0000874066],"genre_scores_gemma":[0.97329223,0.00014538583,0.020717759,0.0045534507,0.000444797,0.0000046738546,0.0000062656795,0.00001448605,0.000820957],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985521,0.000043538254,0.0009634956,0.000121039986,0.00022107539,0.00009875229],"domain_scores_gemma":[0.9986043,0.00027131938,0.0005330701,0.00010764688,0.00022968597,0.00025400706],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009785021,0.00008084974,0.0003796246,0.000065454755,0.000032452714,0.000012881965,0.00005063762,0.00011342846,0.00008711081],"category_scores_gemma":[0.0003766257,0.00006151733,0.00015364315,0.0000640378,0.00006122483,0.00013115346,0.000011037442,0.0001198997,0.000009841354],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0040179077,0.0006435458,0.7460363,0.0009201669,0.0018161793,0.00008355283,0.0021348428,0.000029975876,0.053251933,0.0021782408,0.022928106,0.16595924],"study_design_scores_gemma":[0.00926351,0.0013230967,0.803623,0.0005209908,0.00040353325,0.00009550655,0.00008901133,0.0045563583,0.151605,0.004291837,0.024026763,0.00020136009],"about_ca_topic_score_codex":6.8423833e-7,"about_ca_topic_score_gemma":1.216003e-7,"teacher_disagreement_score":0.16575788,"about_ca_system_score_codex":0.000026325646,"about_ca_system_score_gemma":0.00041938174,"threshold_uncertainty_score":0.2508604},"labels":[],"label_agreement":null},{"id":"W2948271129","doi":"10.1172/jci123778","title":"Dectin-2–induced CCL2 production in tissue-resident macrophages ignites cardiac arteritis","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Kawasaki Disease and Coronary Complications","field":"Medicine","cited_by":78,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Centers for Disease Control and Prevention; National Institutes of Health; Japan Blood Products Organization; Université Laval; Rheumatology Research Foundation; Massachusetts General Hospital; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; Brigham and Women's Hospital","keywords":"Arteritis; Medicine; Immunology; Pathology; Biology","score_opus":0.07436483823168445,"score_gpt":0.39883623534167306,"score_spread":0.3244713971099886,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2948271129","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9922593,0.00051979325,0.00001642907,0.0052625197,0.0011002601,0.00037846167,0.0000017982546,0.000015752028,0.0004456438],"genre_scores_gemma":[0.99681306,0.00024522812,0.00081469206,0.0005045344,0.001013459,0.000008591418,0.000012027591,0.000014491566,0.0005739019],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978664,0.00023509015,0.0012083732,0.00020456596,0.00035019752,0.00013538387],"domain_scores_gemma":[0.9983721,0.00022655111,0.0005539026,0.00025124275,0.00035036908,0.00024583368],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00095723884,0.0001046853,0.00046450572,0.0001697402,0.000032329823,0.000023925373,0.00008647895,0.00010666974,0.00015047568],"category_scores_gemma":[0.0011006187,0.000091791,0.00018644528,0.00026866666,0.00006200101,0.00028962726,0.000019096777,0.00040226744,0.00015461979],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003004964,0.00031938555,0.8418285,0.00011292931,0.000089660396,0.00005373441,0.0002004282,0.00003700322,0.11873355,0.0000931377,0.0039284793,0.03430265],"study_design_scores_gemma":[0.0009992591,0.0007975701,0.97392315,0.00035325252,0.00011781291,0.00008327685,0.00016374448,0.000049638216,0.019344063,0.0022103137,0.0018643882,0.00009351589],"about_ca_topic_score_codex":0.000025267815,"about_ca_topic_score_gemma":0.000007333052,"teacher_disagreement_score":0.1320946,"about_ca_system_score_codex":0.000060650982,"about_ca_system_score_gemma":0.00032512937,"threshold_uncertainty_score":0.37431285},"labels":[],"label_agreement":null},{"id":"W2950595651","doi":"10.1172/jci130640","title":"The puzzle of lactational bone physiology: osteocytes masquerade as osteoclasts and osteoblasts","year":2019,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Vitamin D Research Studies","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Calcium; Weaning; Lactation; Calcium metabolism; Skeleton (computer programming); Endocrinology; Internal medicine; Breastfeeding; Calcium supplementation; Calcium signaling; Physiology; Chemistry; Medicine; Biology; Pregnancy; Anatomy; Pathology","score_opus":0.06685007539413948,"score_gpt":0.39137645985771957,"score_spread":0.32452638446358006,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2950595651","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.47993165,0.0012692185,0.000002411633,0.51737964,0.0007328459,0.00036446302,0.000013038636,0.0000064002993,0.00030032333],"genre_scores_gemma":[0.59871113,0.00710224,0.0024813577,0.35697696,0.02196378,0.00003408078,0.00021429935,0.0001569349,0.012359221],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99521077,0.0007555424,0.002221377,0.00028177927,0.0012265474,0.00030400764],"domain_scores_gemma":[0.9866995,0.008946346,0.0026226228,0.00032749798,0.0012355632,0.0001684608],"candidate_categories":["metaresearch","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0025316495,0.00026388367,0.0013087246,0.00020996446,0.000129335,0.000037899998,0.00022262966,0.0007219186,0.000029052504],"category_scores_gemma":[0.014864073,0.000156316,0.0004129626,0.00016989428,0.0014948988,0.00017505827,0.00014695835,0.0032851882,0.000033314664],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006073179,0.00007923329,0.014821095,0.0009825561,0.0009383402,0.00020362527,0.0002375784,0.0000071599866,0.007609347,0.000061033796,0.9707221,0.003730629],"study_design_scores_gemma":[0.0070411037,0.0068743397,0.52942544,0.00329154,0.0009135137,0.00096619414,0.0003380064,0.00014123999,0.004711562,0.00828047,0.4376049,0.00041167907],"about_ca_topic_score_codex":0.0000061640108,"about_ca_topic_score_gemma":0.0000044322123,"teacher_disagreement_score":0.5331172,"about_ca_system_score_codex":0.000062648025,"about_ca_system_score_gemma":0.0008903071,"threshold_uncertainty_score":0.99901426},"labels":[],"label_agreement":null},{"id":"W2952553905","doi":"10.1172/jci124616","title":"More friend than foe: the emerging role of neutrophils in tissue repair","year":2019,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Neutrophil, Myeloperoxidase and Oxidative Mechanisms","field":"Immunology and Microbiology","cited_by":419,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Deutsche Forschungsgemeinschaft; Canada Research Chairs; Heart and Stroke Foundation of Canada","keywords":"Collateral damage; Inflammation; Immune system; Biology; Immunology; Infiltration (HVAC); Bone marrow; Cell biology","score_opus":0.10202073006737516,"score_gpt":0.40570153098009915,"score_spread":0.303680800912724,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2952553905","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.022926483,0.974339,0.000017005732,0.00037468332,0.0016334933,0.0005499743,0.000022252918,0.000012979657,0.0001240943],"genre_scores_gemma":[0.004315072,0.9943163,0.0002743156,0.00017232295,0.00042387022,0.000011640819,0.000056646473,0.000042576637,0.0003872908],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9938755,0.0018731883,0.003530722,0.00031622263,0.00013421093,0.00027017485],"domain_scores_gemma":[0.99397594,0.0013654907,0.003873139,0.00047759007,0.00024994486,0.000057925223],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00293185,0.00033825394,0.0025515626,0.000304578,0.00006489753,0.00001311303,0.00060896436,0.0007698427,0.00011735084],"category_scores_gemma":[0.0010198064,0.00020062432,0.0010189521,0.00038656875,0.00042674877,0.00019136345,0.00012940845,0.0019435999,0.00013481385],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020441315,0.00035880512,0.00076349656,0.003637935,0.0014370397,0.00006607126,0.0008522661,0.000023734228,0.010107385,0.0055304943,0.0026309781,0.9743874],"study_design_scores_gemma":[0.00081537967,0.00076840323,0.0005236644,0.007531916,0.0009358705,0.00014710227,0.00024114118,0.0000028937611,0.0033404808,0.0023002157,0.9831427,0.00025025845],"about_ca_topic_score_codex":0.000020878646,"about_ca_topic_score_gemma":0.0000067433575,"teacher_disagreement_score":0.9805117,"about_ca_system_score_codex":0.000046463185,"about_ca_system_score_gemma":0.00055697415,"threshold_uncertainty_score":0.8444082},"labels":[],"label_agreement":null},{"id":"W2953645244","doi":"10.1172/jci125628","title":"T follicular helper cells in human efferent lymph retain lymphoid characteristics","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":160,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"National Center for Advancing Translational Sciences; Center for AIDS Research, University of Washington; National Institutes of Health; Vetenskapsrådet; National Institute of Allergy and Infectious Diseases; Pediatric Infectious Diseases Society; Karolinska Institutet; Parker Institute for Cancer Immunotherapy; University of Pennsylvania; Children's Hospital of Philadelphia; National Institute of General Medical Sciences; U.S. Department of Veterans Affairs","keywords":"Lymphatic system; Lymph; Efferent; Pathology; Follicular phase; Immunology; Biology; Medicine; Anatomy; Endocrinology","score_opus":0.034647114051272035,"score_gpt":0.31319030741519654,"score_spread":0.2785431933639245,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2953645244","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99167496,0.0001437401,0.000087366614,0.00032600088,0.007054112,0.00012892034,0.0000010811289,0.000010684563,0.00057312305],"genre_scores_gemma":[0.99372953,0.000106183244,0.000056024004,0.0007958681,0.00017975539,0.0000018100415,0.00004399391,0.000012683631,0.0050741467],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9972871,0.00061345915,0.0016946838,0.00016068135,0.00007633171,0.00016776098],"domain_scores_gemma":[0.9981851,0.00031104215,0.0010757798,0.0001806107,0.00020275285,0.00004470876],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001600136,0.00013011851,0.00050737505,0.00016843138,0.000047453126,0.000022317485,0.0001495101,0.0003329486,0.0009153024],"category_scores_gemma":[0.00042845067,0.00010683972,0.0002483266,0.00010757521,0.000099866695,0.00023421446,0.00002852036,0.00055378105,0.00064033247],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029560205,0.00020253424,0.21624404,0.000023266526,0.00009334822,0.000006193452,0.00014105938,0.000021367354,0.77646756,0.00026218334,0.003989141,0.00225368],"study_design_scores_gemma":[0.007808596,0.0013202175,0.5857211,0.0004914784,0.00011298259,0.00016898094,0.00027091146,0.00022346924,0.33325246,0.0007332884,0.069556154,0.00034037224],"about_ca_topic_score_codex":0.00001966561,"about_ca_topic_score_gemma":0.0000016485969,"teacher_disagreement_score":0.44321513,"about_ca_system_score_codex":0.000090393,"about_ca_system_score_gemma":0.00011293769,"threshold_uncertainty_score":0.999998},"labels":[],"label_agreement":null},{"id":"W2953671780","doi":"10.1172/jci125538","title":"Ankyrin-B dysfunction predisposes to arrhythmogenic cardiomyopathy and is amenable to therapy","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cardiovascular Effects of Exercise","field":"Medicine","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Population Health Research Institute; Hospital for Sick Children; University of British Columbia; Dalhousie University; Toronto General Hospital; University of Toronto; Western University","funders":"National Center for Advancing Translational Sciences; National Human Genome Research Institute; National Heart, Lung, and Blood Institute; National Institutes of Health; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; ZonMw; Fondation Leducq; Johns Hopkins University; Canadian Institutes of Health Research; Ohio State University","keywords":"Wnt signaling pathway; Cardiomyopathy; Ankyrin; Sudden cardiac death; Plakoglobin; Phenotype; Medicine; Ankyrin repeat; Sudden death; Catenin; Cancer research; Heart failure; Internal medicine; Biology; Cell biology; Signal transduction; Genetics","score_opus":0.03772923377244257,"score_gpt":0.3416868653558006,"score_spread":0.30395763158335803,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2953671780","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99284756,0.0007769306,0.0004524935,0.0037280107,0.0010735783,0.00078456535,0.000002528017,0.00001790338,0.0003164443],"genre_scores_gemma":[0.98905486,0.0004167398,0.0036704342,0.005020497,0.0014349105,0.000007798916,0.000002741942,0.00002599995,0.00036601484],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979145,0.00017120561,0.0009082967,0.00026207662,0.00057172263,0.00017220475],"domain_scores_gemma":[0.99797726,0.00026579175,0.00030728534,0.0003520117,0.00045256602,0.0006450615],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024448854,0.00014520746,0.00080394273,0.00021292541,0.00003073847,0.000042788517,0.00007314501,0.00014003077,0.00005018882],"category_scores_gemma":[0.0013207991,0.00011397572,0.0004872549,0.0002908449,0.00005172312,0.00022951014,0.000040025265,0.00032792444,0.00010303919],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0073318537,0.00032489997,0.63162905,0.00028991434,0.00152821,0.00018231076,0.0013532607,0.0012992761,0.0800095,0.00007738688,0.032962613,0.24301173],"study_design_scores_gemma":[0.0058444,0.006875199,0.9351014,0.0006804388,0.00040527535,0.0005253433,0.00010577755,0.00023850321,0.018502083,0.000568741,0.030918792,0.0002340797],"about_ca_topic_score_codex":0.000016601833,"about_ca_topic_score_gemma":0.0000010572468,"teacher_disagreement_score":0.3034723,"about_ca_system_score_codex":0.00005665148,"about_ca_system_score_gemma":0.00018622886,"threshold_uncertainty_score":0.46477953},"labels":[],"label_agreement":null},{"id":"W2953812088","doi":"10.1172/jci126744","title":"Epithelial HIF-1α/claudin-1 axis regulates barrier dysfunction in eosinophilic esophagitis","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Eosinophilic Esophagitis","field":"Medicine","cited_by":94,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Colorado School of Medicine, Anschutz Medical Campus; National Institute of Diabetes and Digestive and Kidney Diseases; Queen's University Belfast; Queen's University; National Institutes of Health; Rare Diseases Clinical Research Network; National Center for Advancing Translational Sciences; Children's Hospital Colorado; Wellcome Trust; American Partnership for Eosinophilic Disorders; Meso Scale Diagnostics; National Institute of Allergy and Infectious Diseases; U.S. Department of Veterans Affairs","keywords":"Eosinophilic esophagitis; Claudin; Skin barrier; Tight junction; Epithelium; Eosinophilic; Pathology; Medicine; Cancer research; Biology; Cell biology; Dermatology; Disease","score_opus":0.03895611579644659,"score_gpt":0.33516948268736174,"score_spread":0.29621336689091515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2953812088","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9883356,0.00078680983,0.000033797896,0.007143293,0.0022953684,0.00043238993,0.000007315159,0.00003328002,0.0009321295],"genre_scores_gemma":[0.99175745,0.0002580886,0.0021599205,0.002427699,0.0020456747,0.0000042996485,0.000016302474,0.0000452708,0.00128531],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9952463,0.0003897645,0.0028211246,0.0003840836,0.00083220325,0.0003265336],"domain_scores_gemma":[0.99621624,0.00084822986,0.0013667645,0.00043702964,0.0005858599,0.00054585777],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0027717738,0.00025384096,0.0010882574,0.00044991277,0.000049027673,0.000043350734,0.00019162241,0.00046881146,0.00065246876],"category_scores_gemma":[0.0038968467,0.00021760796,0.00045313654,0.00055907643,0.00032888397,0.0006335121,0.00004826819,0.0012126013,0.0002827106],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00093308423,0.0003261121,0.92839175,0.00014595914,0.00016335423,0.00026288585,0.00028472644,0.00012228168,0.044075016,0.00069980574,0.0025261128,0.022068938],"study_design_scores_gemma":[0.0070641804,0.0023461652,0.9481931,0.00080822833,0.00017318295,0.0004168556,0.00005940319,0.0007884578,0.023173418,0.014998294,0.0017556987,0.00022303488],"about_ca_topic_score_codex":0.00004518802,"about_ca_topic_score_gemma":0.000015976982,"teacher_disagreement_score":0.021845903,"about_ca_system_score_codex":0.00019726575,"about_ca_system_score_gemma":0.0005530974,"threshold_uncertainty_score":0.8873795},"labels":[],"label_agreement":null},{"id":"W2962835311","doi":"10.1172/jci129107","title":"Impaired plasma membrane localization of ubiquitin ligase complex underlies 3-M syndrome development","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; National Cancer Institute; University of North Carolina at Chapel Hill; National Institutes of Health; Hospital for Sick Children","keywords":"Ubiquitin ligase; Biology; Cell biology; Dwarfism; Ubiquitin; Mutation; Phosphorylation; Genetics; Gene","score_opus":0.0736757577449552,"score_gpt":0.34207948890820883,"score_spread":0.2684037311632536,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2962835311","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953645,0.00009153892,0.0037958072,0.0002725588,0.0002292805,0.00010834795,0.000003253746,0.0000030551198,0.00013167878],"genre_scores_gemma":[0.99539894,0.0001220989,0.0038166188,0.00026827742,0.00011094075,0.0000021678188,0.000058634774,0.000010486298,0.00021184271],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99829817,0.000118178934,0.001143326,0.00013303412,0.00021608076,0.00009124154],"domain_scores_gemma":[0.9984265,0.00005290648,0.00090903556,0.00016583121,0.00033755924,0.00010814511],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008359975,0.00008635621,0.00026780274,0.000055097342,0.000032769436,0.000013837231,0.00014050244,0.0001372179,0.0000520122],"category_scores_gemma":[0.00025900707,0.000074261174,0.000118468095,0.000095481824,0.00011632297,0.000014026008,0.000028516975,0.00010082043,0.000010264863],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048595472,0.00042562286,0.124230415,0.0003035997,0.0004098824,0.0000073732394,0.0003281006,0.012653946,0.84471804,0.0008361415,0.003459977,0.012140948],"study_design_scores_gemma":[0.003129925,0.0017815168,0.18974917,0.000351761,0.00008585622,0.00012243967,0.00029534867,0.0051589985,0.7746237,0.00078428345,0.02359725,0.00031978646],"about_ca_topic_score_codex":0.000003288659,"about_ca_topic_score_gemma":0.0000062357403,"teacher_disagreement_score":0.07009437,"about_ca_system_score_codex":0.000018207678,"about_ca_system_score_gemma":0.00037861447,"threshold_uncertainty_score":0.30282828},"labels":[],"label_agreement":null},{"id":"W2963503058","doi":"10.1172/jci120633","title":"Structure-guided drug design identifies a BRD4-selective small molecule that suppresses HIV","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":84,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Allergy and Infectious Diseases; Lanzhou Veterinary Research Institute, Chinese Academy of Agricultural Sciences; National Institutes of Health; Chinese Academy of Agricultural Sciences; China Scholarship Council; National Institute of Mental Health; Robert Mapplethorpe Foundation; Crohn's and Colitis Foundation; U.S. Department of Defense","keywords":"Bromodomain; BRD4; Epigenetics; Chromatin; Provirus; Biology; Histone; BET inhibitor; Transactivation; Small molecule; Drug discovery; Virology; Transcription factor; Genetics; Bioinformatics; Genome; DNA","score_opus":0.09694265488467114,"score_gpt":0.3596081667909881,"score_spread":0.262665511906317,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2963503058","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962096,0.0007724307,0.00055670657,0.0010671852,0.00082540663,0.00030035057,0.000022546597,0.0000151761205,0.00023056097],"genre_scores_gemma":[0.99572885,0.00011650977,0.0012414006,0.00023418445,0.00009481991,0.0000036625174,0.00005775497,0.000013132243,0.0025096876],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99741066,0.0011164747,0.00088962703,0.00020777382,0.00011915163,0.00025629392],"domain_scores_gemma":[0.997256,0.0013768057,0.00070461107,0.00019177559,0.00037021795,0.00010058329],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012209475,0.0001468521,0.0004812387,0.00013057387,0.000082738276,0.000046616726,0.0002539937,0.00021075159,0.0005150108],"category_scores_gemma":[0.0014805157,0.000105596046,0.00021082409,0.000119336204,0.00026625133,0.00023716949,0.000047831683,0.0006469501,0.00058259245],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015278485,0.00044002445,0.33563283,0.00007794892,0.0019012963,0.00008737566,0.0013121086,0.00037950644,0.5065643,0.00044228666,0.14909318,0.0025412522],"study_design_scores_gemma":[0.00418077,0.0008297359,0.106524706,0.00012949914,0.00013986697,0.00015043195,0.00017968567,0.000029774537,0.8785181,0.007314515,0.0018292448,0.00017365276],"about_ca_topic_score_codex":0.000029027547,"about_ca_topic_score_gemma":0.000020033183,"teacher_disagreement_score":0.3719538,"about_ca_system_score_codex":0.000042022013,"about_ca_system_score_gemma":0.0003977102,"threshold_uncertainty_score":0.7488242},"labels":[],"label_agreement":null},{"id":"W2966674500","doi":"10.1172/jci128865","title":"Innate and adaptive nasal mucosal immune responses following experimental human pneumococcal colonization","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Wellcome Trust; Medical Research Council; Bill and Melinda Gates Foundation","keywords":"Immunology; Innate immune system; Colonization; Immune system; Acquired immune system; Streptococcus pneumoniae; Microbiology; Pneumococcal infections; Biology; Medicine; Antibiotics","score_opus":0.0726633202950458,"score_gpt":0.4028023871286754,"score_spread":0.3301390668336296,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2966674500","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972177,0.0001506681,0.000059541104,0.0012092507,0.00089199154,0.00022734984,0.0000011012517,0.000019508383,0.00022284806],"genre_scores_gemma":[0.9985409,0.000016693939,0.0002856119,0.00053768646,0.00038238225,0.0000028695574,0.000004456952,0.00001588678,0.0002135615],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9980027,0.00031819553,0.0011166012,0.00014919067,0.00029081132,0.00012251877],"domain_scores_gemma":[0.9984957,0.00032812302,0.0006252493,0.00011455544,0.00020307547,0.00023331243],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001222716,0.000114034796,0.0004545022,0.00016254492,0.00011262684,0.000029584799,0.000053717547,0.00017700874,0.000028946757],"category_scores_gemma":[0.00080706086,0.000091647285,0.00022866833,0.00016137668,0.00016792145,0.00031625817,0.0000312563,0.00048658293,0.000015889993],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029859185,0.00014426568,0.37066013,0.000009837093,0.000098349265,0.0000372604,0.00019044573,0.000009344086,0.6279968,0.00025360155,0.00003614266,0.0002652364],"study_design_scores_gemma":[0.0038755822,0.0044447896,0.9522541,0.00027420014,0.00014842702,0.00021159128,0.00029952606,0.000498878,0.03677929,0.0004075164,0.0006783373,0.00012777517],"about_ca_topic_score_codex":0.000004530957,"about_ca_topic_score_gemma":0.0000012430005,"teacher_disagreement_score":0.5912175,"about_ca_system_score_codex":0.00005457851,"about_ca_system_score_gemma":0.0002635903,"threshold_uncertainty_score":0.3737268},"labels":[],"label_agreement":null},{"id":"W2967668820","doi":"10.1172/jci130755","title":"Antiobesogenic effects of central GIPR antagonism","year":2019,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Diabetes Treatment and Management","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Diabetes Canada; University of Toronto; University Health Network; Toronto General Hospital; University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; University of Alberta; Toronto General Hospital Research Institute, University Health Network; Canadian Institutes of Health Research; University of Toronto; Diabetes Canada","keywords":"Overnutrition; Leptin; Endocrinology; Internal medicine; Hormone; Obesity; Appetite; Antagonism; Biology; Medicine; Receptor","score_opus":0.046430447532636566,"score_gpt":0.3436032822189328,"score_spread":0.29717283468629624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2967668820","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5954828,0.0012763579,0.00011726821,0.39257327,0.008258662,0.0011206983,0.000010564534,0.00002435043,0.0011359622],"genre_scores_gemma":[0.13386178,0.0023933114,0.0041702874,0.8275412,0.022352071,0.000007877226,0.0004525977,0.0001257796,0.009095105],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9965798,0.00024303142,0.001976942,0.00021238768,0.0007169948,0.00027083518],"domain_scores_gemma":[0.99586105,0.0008820388,0.0024824075,0.00032034182,0.00029819814,0.0001559849],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00076435023,0.00023727719,0.0013790114,0.00024335063,0.00001672417,0.000019948582,0.00017151047,0.000668099,0.000038493592],"category_scores_gemma":[0.00107904,0.00017602433,0.00089670456,0.00013135778,0.00019082798,0.00014526218,0.000040229483,0.0014735584,0.000042265856],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009949477,0.00022236574,0.044760823,0.001989807,0.0013572163,0.00053542154,0.00003653207,0.000003191563,0.0007842801,0.000040349565,0.9448046,0.0053659324],"study_design_scores_gemma":[0.010190604,0.006845746,0.18634278,0.004452463,0.007020176,0.00007001061,0.0000095200385,0.00009692828,0.014326036,0.0019316865,0.7683275,0.00038654797],"about_ca_topic_score_codex":0.0000042320607,"about_ca_topic_score_gemma":1.8415406e-7,"teacher_disagreement_score":0.46162108,"about_ca_system_score_codex":0.000070272145,"about_ca_system_score_gemma":0.00040221584,"threshold_uncertainty_score":0.7178064},"labels":[],"label_agreement":null},{"id":"W2968883182","doi":"10.1172/jci126091","title":"Identifying and targeting pathogenic PI3K/AKT/mTOR signaling in IL-6 blockade–refractory idiopathic multicentric Castleman disease","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Viral-associated cancers and disorders","field":"Medicine","cited_by":140,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Prevention of Organ Failure","funders":"National Heart, Lung, and Blood Institute; Penn Center for Precision Medicine, University of Pennsylvania; National Cancer Institute; National Institutes of Health; Janssen Pharmaceuticals; Celgene; Children's Hospital of Philadelphia; University of Pennsylvania","keywords":"Medicine; Myelofibrosis; Organomegaly; Blockade; Interleukin 6; Anasarca; Refractory (planetary science); Castleman disease; Immunology; Cytokine; Internal medicine; Disease; Receptor","score_opus":0.052298794727512546,"score_gpt":0.3519851468420589,"score_spread":0.29968635211454636,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2968883182","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939191,0.0039884383,0.000045860026,0.0011135373,0.0006394289,0.00024557448,0.0000030439967,0.00001247143,0.000032594093],"genre_scores_gemma":[0.997517,0.0005026835,0.0006773096,0.00069765653,0.00052747474,0.0000020660345,0.000006971656,0.000023193525,0.00004563938],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99704874,0.0003195033,0.0016618565,0.00023890659,0.00048623083,0.0002447782],"domain_scores_gemma":[0.9975358,0.00033051366,0.0012426706,0.00014277379,0.00023430059,0.0005139311],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0028046689,0.00014917119,0.0006016333,0.00022047336,0.000055328623,0.0000432953,0.00009874278,0.00018181269,0.000044250824],"category_scores_gemma":[0.004980465,0.00012955038,0.00023180488,0.00027842526,0.00009012107,0.00034096473,0.000042954085,0.00085392804,0.000015276593],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005783222,0.00019245684,0.96076834,0.00028392219,0.00006956578,0.00017562087,0.00059036963,0.00021725548,0.032133974,0.000016272343,0.00014106189,0.0048328578],"study_design_scores_gemma":[0.013107417,0.0012945951,0.9672408,0.0027989827,0.00057646673,0.000035343768,0.0019679186,0.008474137,0.0008373064,0.002933258,0.00037333477,0.00036040824],"about_ca_topic_score_codex":0.000022699543,"about_ca_topic_score_gemma":0.000005835834,"teacher_disagreement_score":0.031296667,"about_ca_system_score_codex":0.00012610128,"about_ca_system_score_gemma":0.00050039997,"threshold_uncertainty_score":0.5962441},"labels":[],"label_agreement":null},{"id":"W2969087302","doi":"10.1172/jci127374","title":"Degradation of splicing factor SRSF3 contributes to progressive liver disease","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":117,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of California, San Diego; National Cancer Institute; National Institutes of Health; National Institute of Diabetes and Digestive and Kidney Diseases; University of Minnesota; Eunice Kennedy Shriver National Institute of Child Health and Human Development; Government of Ontario; U.S. Department of Veterans Affairs","keywords":"Splicing factor; Nonalcoholic fatty liver disease; RNA splicing; Cirrhosis; Hepatocellular carcinoma; Cancer research; Biology; Liver disease; Steatosis; Alternative splicing; Fatty liver; Internal medicine; Medicine; Endocrinology; RNA; Gene; Biochemistry; Exon; Disease","score_opus":0.0531995048928869,"score_gpt":0.3806341115405284,"score_spread":0.3274346066476415,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2969087302","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99701905,0.0004191258,0.0014461334,0.000714528,0.00016605976,0.00020645642,0.0000063845946,0.0000016321119,0.0000206193],"genre_scores_gemma":[0.99762654,0.000077492485,0.0012803525,0.0003838803,0.00021736806,0.0000018940162,0.000014805841,0.0000073070596,0.00039033152],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986987,0.00013796845,0.0006907514,0.00012505423,0.00023228611,0.00011520358],"domain_scores_gemma":[0.99845934,0.00011438863,0.0005235061,0.00013380288,0.0004996156,0.00026936037],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006980051,0.00006826663,0.00021821093,0.00006516997,0.000020646117,0.000018496668,0.0001351854,0.000084115076,0.000016319922],"category_scores_gemma":[0.002828744,0.00005331016,0.00013849532,0.0000908183,0.000066974266,0.000015288928,0.000043291453,0.00014013842,0.000008729418],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048203324,0.000052751813,0.35499772,0.000038734597,0.00006275209,0.0000043754644,0.000014232054,0.0001279104,0.63759595,0.0001379006,0.0007840055,0.0057016057],"study_design_scores_gemma":[0.0013683313,0.0014609034,0.645508,0.00031436046,0.000040980605,0.0000047129943,0.000038793638,0.0011526386,0.34814805,0.00039404002,0.0014474982,0.000121724224],"about_ca_topic_score_codex":0.000007599418,"about_ca_topic_score_gemma":0.000003816042,"teacher_disagreement_score":0.29051027,"about_ca_system_score_codex":0.0000112259295,"about_ca_system_score_gemma":0.00024435477,"threshold_uncertainty_score":0.3386475},"labels":[],"label_agreement":null},{"id":"W2969745156","doi":"10.1172/jci128903","title":"Polymerase δ deficiency causes syndromic immunodeficiency with replicative stress","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immunodeficiency and Autoimmune Disorders","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child, Adolescent and Family Mental Health","funders":"Oesterreichische Nationalbank; Universität Wien; Medizinische Universität Wien; European Commission; Cancer Research Institute; Österreichischen Akademie der Wissenschaften; Wellcome Trust; Centers for Disease Control and Prevention; Austrian Science Fund; Jeffrey Modell Foundation","keywords":"Immunodeficiency; Medicine; Virology; Immunologic Deficiency Syndromes; Biology; Genetics","score_opus":0.026068335197268106,"score_gpt":0.3085938198216083,"score_spread":0.2825254846243402,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2969745156","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9855222,0.011259761,0.00018173295,0.0004512448,0.001199747,0.00022664818,0.0000104868595,0.000029320056,0.0011188466],"genre_scores_gemma":[0.9986173,0.00021418752,0.00011575856,0.00029464604,0.000012219487,0.0000037690781,0.000025203944,0.00001966749,0.000697261],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9970678,0.00043876632,0.0017054233,0.00031856232,0.00013050422,0.00033893238],"domain_scores_gemma":[0.99679947,0.0005822995,0.0017488851,0.00047670805,0.00036654246,0.0000261156],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001515509,0.00022152488,0.0006592667,0.00017713389,0.00017012385,0.00003310446,0.00049699756,0.00026520647,0.0003003415],"category_scores_gemma":[0.0006402522,0.00015686227,0.00025641458,0.00035997503,0.0006966564,0.00044303993,0.000054550877,0.0008632278,0.00037785326],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025037986,0.0026463089,0.39894137,0.00018687686,0.000817433,0.000043287546,0.003830496,0.0013449052,0.5358141,0.010285186,0.00058880163,0.042997453],"study_design_scores_gemma":[0.014651849,0.011217874,0.7698958,0.0015246599,0.00060446985,0.0014979033,0.0067995833,0.00012380905,0.1795872,0.0029753884,0.009727436,0.0013940076],"about_ca_topic_score_codex":0.00005155004,"about_ca_topic_score_gemma":0.0000019436588,"teacher_disagreement_score":0.37095445,"about_ca_system_score_codex":0.000032643864,"about_ca_system_score_gemma":0.00046002638,"threshold_uncertainty_score":0.6396658},"labels":[],"label_agreement":null},{"id":"W2971459028","doi":"10.1172/jci129338","title":"Killers 2.0: NK cell therapies at the forefront of cancer control","year":2019,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":215,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Ottawa Hospital","funders":"Natural Sciences and Engineering Research Council of Canada; Terry Fox Research Institute; Canadian Cancer Society Research Institute; Canadian Institutes of Health Research; Cancer Research Society","keywords":"Chimeric antigen receptor; Oncolytic virus; Cancer immunotherapy; NK-92; Immunology; Cytotoxic T cell; Immunotherapy; Adoptive cell transfer; Cancer; Cancer research; Lymphokine-activated killer cell; Cancer cell; Interleukin 21; Medicine; Biology; Antigen; T cell; Immune system; CD8; Internal medicine","score_opus":0.1088544605288628,"score_gpt":0.3971898933091839,"score_spread":0.28833543278032114,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2971459028","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0013877269,0.9862341,0.000035360383,0.00036488954,0.011226025,0.0003632304,0.000011701349,0.0000053217004,0.00037163356],"genre_scores_gemma":[0.0008893258,0.9836872,0.000018366585,0.00044987773,0.000284613,0.000010575101,0.00004577178,0.000022615182,0.014591661],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9957556,0.0012434408,0.0026027665,0.00016166539,0.00008744921,0.0001490835],"domain_scores_gemma":[0.99233156,0.0017631593,0.005285063,0.0002572963,0.00033339905,0.000029504321],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0016458373,0.00022670443,0.001717966,0.00011444515,0.0000826015,0.0000119369515,0.00029691128,0.00061850576,0.0014043944],"category_scores_gemma":[0.00035799397,0.00011938067,0.0012464748,0.00009249991,0.0003872942,0.00012091493,0.000037861137,0.0011527106,0.0002983967],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005159102,0.00013461825,0.0005735377,0.0023655745,0.002328775,0.0000010759351,0.00018271228,0.000022640364,0.0011840814,0.00006591566,0.11795745,0.8746677],"study_design_scores_gemma":[0.0011522288,0.0005306241,0.00017328576,0.0026948818,0.0014377594,0.000027753013,0.000055258934,0.0000021667674,0.00038796582,0.000039549614,0.99338305,0.000115466115],"about_ca_topic_score_codex":0.000031967105,"about_ca_topic_score_gemma":0.000014400905,"teacher_disagreement_score":0.87542564,"about_ca_system_score_codex":0.00010218823,"about_ca_system_score_gemma":0.0004839999,"threshold_uncertainty_score":0.99950844},"labels":[],"label_agreement":null},{"id":"W2971894914","doi":"10.1172/jci128205","title":"Peptide-conjugated oligonucleotides evoke long-lasting myotonic dystrophy correction in patient-derived cells and mice","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Genetic Neurodegenerative Diseases","field":"Neuroscience","cited_by":105,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital de l'Enfant-Jésus","funders":"Medical Research Council; Association Française contre les Myopathies","keywords":"Myotonic dystrophy; Oligonucleotide; Conjugated system; Peptide; Medicine; Neuroscience; Biochemistry; Chemistry; Internal medicine; Psychology; Gene","score_opus":0.044318714219908,"score_gpt":0.30659695475364984,"score_spread":0.2622782405337418,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2971894914","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972878,0.00003494259,0.00005976828,0.0002132165,0.0020118314,0.00027718482,0.000003428134,0.000015715652,0.000096075535],"genre_scores_gemma":[0.99816614,0.00009064163,0.00061722635,0.0009048912,0.00014444317,0.0000025420734,0.0000011327945,0.000020213818,0.00005274298],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968765,0.00079093024,0.0014064168,0.00035289707,0.00036713676,0.00020614955],"domain_scores_gemma":[0.996889,0.001322814,0.0011896371,0.00014350959,0.00020388687,0.00025118337],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005599978,0.00016375452,0.00038968085,0.00017596004,0.00006200624,0.00008310539,0.00015166617,0.00009491283,0.000031976422],"category_scores_gemma":[0.0045165736,0.00014642168,0.00011923255,0.00029021408,0.00022496081,0.00041858343,0.000056074703,0.00047844157,0.000039616516],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012834465,0.00008495922,0.11311553,0.000020053205,0.000005347364,0.000023785555,0.00014616601,0.002981735,0.8817568,0.000012147284,0.00011587846,0.0016092573],"study_design_scores_gemma":[0.0009429739,0.000740834,0.23146471,0.00015655745,0.000022892038,0.000034837805,0.00006990275,0.006479912,0.7596852,0.00024959736,0.000030158677,0.0001224001],"about_ca_topic_score_codex":0.0000111398485,"about_ca_topic_score_gemma":0.000010589301,"teacher_disagreement_score":0.12207159,"about_ca_system_score_codex":0.000036060846,"about_ca_system_score_gemma":0.00016881606,"threshold_uncertainty_score":0.5970903},"labels":[],"label_agreement":null},{"id":"W2972255989","doi":"10.1172/jci128877","title":"Targeting innate immunity for tuberculosis vaccination","year":2019,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Immune responses and vaccinations","field":"Immunology and Microbiology","cited_by":137,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"National Institute of Allergy and Infectious Diseases; Radboud Universitair Medisch Centrum; International Society for Advancement of Cytometry; National Heart, Lung, and Blood Institute; Bill and Melinda Gates Foundation","keywords":"Innate immune system; Immunology; Immunity; Acquired immune system; Immune system; Vaccination; Biology; Mycobacterium tuberculosis; Tuberculosis; Tuberculosis vaccines; Reprogramming; Myeloid; Medicine; Cell; Genetics","score_opus":0.15123186389129226,"score_gpt":0.4363802498010197,"score_spread":0.28514838590972746,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2972255989","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005081541,0.9935599,0.00057948404,0.00025144895,0.004183307,0.0007905593,0.000046943616,0.00001732472,0.00006290802],"genre_scores_gemma":[0.00024279466,0.9970521,0.00065363874,0.00009216235,0.00038233984,0.000025412914,0.0004817912,0.00004427779,0.0010254985],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99380076,0.0018569343,0.0037806868,0.0002301042,0.000078686295,0.00025280245],"domain_scores_gemma":[0.9893163,0.0048558973,0.0047310167,0.00028582264,0.0007636944,0.000047286623],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0054578595,0.00030315,0.0022655479,0.00039934425,0.00018705106,0.00004194085,0.00044589568,0.0010831617,0.00016393563],"category_scores_gemma":[0.008359882,0.00022847427,0.0015414469,0.00029279944,0.00006345388,0.00029950938,0.00007821858,0.0014688004,0.00015592492],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000107073334,0.00012444607,0.0000580615,0.0034302608,0.00095494033,9.1314746e-7,0.000053732583,0.000007864275,0.00007279547,0.0005395165,0.01044694,0.98420346],"study_design_scores_gemma":[0.001283094,0.0005097403,0.00034844916,0.0032444433,0.0018474192,0.00006915612,0.000030513356,0.00001877452,0.000046554615,0.000540475,0.99181867,0.00024270272],"about_ca_topic_score_codex":0.000006453359,"about_ca_topic_score_gemma":7.636814e-7,"teacher_disagreement_score":0.98396075,"about_ca_system_score_codex":0.000105902174,"about_ca_system_score_gemma":0.00092675484,"threshold_uncertainty_score":0.99999315},"labels":[],"label_agreement":null},{"id":"W2973418595","doi":"10.1172/jci127286","title":"Peritoneal GATA6+ macrophages function as a portal for Staphylococcus aureus dissemination","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":77,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Laurentian University; University of Calgary","funders":"University of Calgary; Deutsche Forschungsgemeinschaft; University of Southern California","keywords":"Staphylococcus aureus; Peritoneum; Peritoneal cavity; Peritoneal dialysis; Medicine; Vancomycin; Microbiology; Sepsis; Antibiotics; Macrophage; Peritonitis; Immunology; Pathology; Biology; Bacteria; Internal medicine; Surgery; In vitro","score_opus":0.05161919600814548,"score_gpt":0.41123092769775976,"score_spread":0.3596117316896143,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2973418595","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99387765,0.0003660743,0.00026503502,0.0032379809,0.0010200368,0.0006179571,0.000014898614,0.000018531344,0.0005818209],"genre_scores_gemma":[0.9951364,0.00014648534,0.00095174246,0.00037674786,0.0018754265,0.000010683465,0.00007428851,0.000026467582,0.0014017614],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99716717,0.00013240194,0.0015438386,0.00024669323,0.00065756193,0.00025236013],"domain_scores_gemma":[0.9964948,0.0010211547,0.00084764964,0.00023258613,0.0009769992,0.00042675165],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002260361,0.00015127668,0.00059720967,0.00019741684,0.00006650516,0.000039202685,0.00011661945,0.00024126175,0.00034439226],"category_scores_gemma":[0.0042538634,0.00012154089,0.0004750442,0.00023715825,0.0001348379,0.00024583144,0.000026754384,0.0005924868,0.0000802514],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010148317,0.0012671176,0.23246695,0.00076971453,0.00067121006,0.00013709832,0.00038694663,0.00010101046,0.6394458,0.0018163297,0.033457264,0.07933227],"study_design_scores_gemma":[0.015236731,0.022562444,0.58601004,0.0015242775,0.0012306605,0.00039081438,0.0016597653,0.0059807627,0.33153298,0.0056338776,0.027553404,0.0006842224],"about_ca_topic_score_codex":0.000009516682,"about_ca_topic_score_gemma":0.0000022241222,"teacher_disagreement_score":0.3535431,"about_ca_system_score_codex":0.00007262122,"about_ca_system_score_gemma":0.0006006052,"threshold_uncertainty_score":0.5092579},"labels":[],"label_agreement":null},{"id":"W2977543492","doi":"10.1172/jci128475","title":"Early adaptive immune activation detected in monozygotic twins with prodromal multiple sclerosis","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Multiple Sclerosis Research Studies","field":"Medicine","cited_by":124,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"Deutschen Multiple Sklerose Gesellschaft; Deutsche Forschungsgemeinschaft; Bundesministerium für Bildung und Forschung; National Institute for Health and Care Research; NIHR Biomedical Research Centre, Royal Marsden NHS Foundation Trust/Institute of Cancer Research","keywords":"Multiple sclerosis; Immune system; Immunology; Monozygotic twin; Medicine; Acquired immune system; Biology; Neuroscience; Genetics","score_opus":0.17458670221909817,"score_gpt":0.36258017312860313,"score_spread":0.18799347090950497,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2977543492","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975432,0.00004362271,0.00027919488,0.0010764453,0.00013905905,0.00078642665,0.000001775587,0.00001778582,0.00011248503],"genre_scores_gemma":[0.9932314,0.00008115372,0.0062095057,0.00012290606,0.00024091853,0.000013339138,0.0000042934134,0.00002396917,0.000072476214],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9969041,0.00034352872,0.001481808,0.00023932137,0.00077697856,0.00025431206],"domain_scores_gemma":[0.9965317,0.0011780189,0.00096015685,0.00023314625,0.0008398298,0.00025712844],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017589655,0.00016182366,0.0007190737,0.00030058718,0.000044055523,0.000028890641,0.00012629908,0.00016006619,0.000028051514],"category_scores_gemma":[0.004774387,0.00011422299,0.00015439522,0.0005622867,0.00023021403,0.0005290518,0.00004469314,0.0009651337,0.000025920355],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003218617,0.0002978116,0.88704073,0.00005420695,0.00018116971,0.0000110541905,0.00054791284,0.0002739129,0.10203632,0.0000141846185,0.000045215173,0.0062788725],"study_design_scores_gemma":[0.0075920913,0.0037297064,0.9670597,0.0014482453,0.0000511489,0.0000103309185,0.0002567623,0.006089049,0.013570567,0.00006033635,0.000019682377,0.00011241917],"about_ca_topic_score_codex":0.000148698,"about_ca_topic_score_gemma":0.00004665153,"teacher_disagreement_score":0.08846575,"about_ca_system_score_codex":0.0001479309,"about_ca_system_score_gemma":0.00044485327,"threshold_uncertainty_score":0.5715732},"labels":[],"label_agreement":null},{"id":"W2978447867","doi":"10.1172/jci124120","title":"Age-dependent SMN expression in disease-relevant tissue and implications for SMA treatment","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Neurogenetic and Muscular Disorders Research","field":"Medicine","cited_by":193,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Portage College","funders":"NIH Clinical Center; National Institute of Neurological Disorders and Stroke; Cytokinetics; Genentech; Eunice Kennedy Shriver National Institute of Child Health and Human Development; PTC Therapeutics; Ionis Pharmaceuticals; Cure SMA; Biogen; AveXis; Spinal Muscular Atrophy Foundation; Pfizer; Johns Hopkins University","keywords":"Spinal muscular atrophy; SMA*; Medicine; Spinal cord; Motor neuron; Lumbar; Messenger RNA; Internal medicine; Disease; Bioinformatics; Andrology; Biology; Surgery; Gene; Genetics","score_opus":0.11842843359950538,"score_gpt":0.446388309202579,"score_spread":0.3279598756030736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2978447867","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9907477,0.00067706266,0.0005038495,0.0071821106,0.00011372812,0.0007078745,0.0000041042367,0.0000039282627,0.000059657104],"genre_scores_gemma":[0.9954201,0.0011474335,0.0024310024,0.00031096739,0.00015097512,0.000022360573,0.000009953992,0.00001212607,0.0004950823],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99878305,0.00010195646,0.00067176274,0.00015147116,0.00018026351,0.00011150439],"domain_scores_gemma":[0.9988142,0.0003441904,0.0002248071,0.00015645998,0.00012734812,0.00033299555],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00055628264,0.0000723269,0.00029399482,0.00009168752,0.000024212923,0.000014664155,0.000049167127,0.00006567986,0.000018041756],"category_scores_gemma":[0.0007253849,0.00005072903,0.00010910505,0.000064316155,0.00007121462,0.00005993098,0.000016850485,0.00014470473,0.000005182494],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008854612,0.00062806474,0.81116766,0.00015042239,0.000061876795,0.00003722422,0.00019070544,0.000069241774,0.10913259,0.0003068159,0.000568392,0.07680152],"study_design_scores_gemma":[0.0051685446,0.0018610175,0.9745041,0.00021905628,0.00009487454,0.000025596079,0.0000455341,0.00035361302,0.0048601013,0.0056129643,0.0071888645,0.000065706365],"about_ca_topic_score_codex":0.000003674344,"about_ca_topic_score_gemma":0.0000061230357,"teacher_disagreement_score":0.16333644,"about_ca_system_score_codex":0.000033771772,"about_ca_system_score_gemma":0.00024935382,"threshold_uncertainty_score":0.206867},"labels":[],"label_agreement":null},{"id":"W2978687867","doi":"10.1172/jci129187","title":"Altered adipose tissue and adipocyte function in the pathogenesis of metabolic syndrome","year":2019,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Adipose Tissue and Metabolism","field":"Medicine","cited_by":665,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Heritage College","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institutes of Health","keywords":"Adipose tissue; White adipose tissue; Adipocyte; Biology; Endocrinology; Adipogenesis; Internal medicine; Adipose tissue macrophages; Hormone; Cell biology; Medicine","score_opus":0.17602838395900394,"score_gpt":0.4257903668924858,"score_spread":0.24976198293348184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2978687867","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.023973726,0.97390157,0.000030790037,0.00019693407,0.0010451141,0.00075888104,0.000010458391,0.000004092476,0.000078442805],"genre_scores_gemma":[0.0031671822,0.994421,0.00065212516,0.00037729632,0.0010527812,0.000009868306,0.000030146171,0.00003408453,0.00025553256],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99457145,0.0011286952,0.003349291,0.00024786126,0.00052830746,0.00017440274],"domain_scores_gemma":[0.9949227,0.001051828,0.0031490265,0.0003983171,0.00024630007,0.00023180095],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004151936,0.00028497906,0.0036270926,0.00039952138,0.00002378921,0.000018339028,0.00020855476,0.0005116881,0.000039104303],"category_scores_gemma":[0.0016781966,0.00016597939,0.00062313466,0.00046602252,0.00019911374,0.00019159558,0.00003419642,0.0010223527,0.000030257661],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000085196465,0.00012633718,0.00067682576,0.00493967,0.00053166744,0.00008578135,0.000118687196,7.68324e-7,0.000046642213,0.00042408792,0.00030866463,0.9926557],"study_design_scores_gemma":[0.0012564264,0.0010088247,0.054869853,0.009072485,0.0125439875,0.0019552012,0.000021201722,0.0000050982385,0.000012225372,0.00040449854,0.91869473,0.00015545418],"about_ca_topic_score_codex":0.0000124449625,"about_ca_topic_score_gemma":0.0000028986985,"teacher_disagreement_score":0.99250025,"about_ca_system_score_codex":0.000014641742,"about_ca_system_score_gemma":0.0007004931,"threshold_uncertainty_score":0.67684436},"labels":[],"label_agreement":null},{"id":"W2981829057","doi":"10.1172/jci130730","title":"Targetable cellular signaling events mediate vascular pathology in vascular Ehlers-Danlos syndrome","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Connective tissue disorders research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":81,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute of General Medical Sciences; National Heart, Lung, and Blood Institute; National Institutes of Health; Fulbright Chile; National Marfan Foundation; Natural Sciences and Engineering Research Council of Canada; Johns Hopkins University; Howard Hughes Medical Institute","keywords":"Ehlers–Danlos syndrome; Pathology; Medicine; Biology","score_opus":0.04200001237540341,"score_gpt":0.34423535650436377,"score_spread":0.30223534412896036,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2981829057","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958104,0.0020379173,0.0010644436,0.00027951892,0.00045724204,0.0002845974,0.0000022384104,0.0000037145892,0.00005992506],"genre_scores_gemma":[0.99774885,0.0005012447,0.0011235907,0.00022700253,0.00022480129,0.0000061175137,0.000038065,0.000026503225,0.00010384976],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9968155,0.0008729511,0.0011888461,0.00034118953,0.00048085232,0.0003006325],"domain_scores_gemma":[0.99842113,0.00015794882,0.00053650537,0.00032653345,0.00034678265,0.00021108174],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00432694,0.00015779941,0.00052636093,0.00017217005,0.00003211581,0.000014514431,0.00033193926,0.0003334622,0.00011658656],"category_scores_gemma":[0.0022652869,0.00014759795,0.0003699627,0.0002279599,0.00011525676,0.000027227297,0.00010423488,0.0005387781,0.00006343444],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010060985,0.0001957248,0.4263232,0.000068105655,0.0002275474,0.00010954717,0.00008468488,0.0023701792,0.5694825,0.000043077405,0.0001475901,0.00084724015],"study_design_scores_gemma":[0.014388316,0.004515844,0.74036735,0.0005668822,0.00023617086,0.00015853268,0.000522127,0.0031513514,0.20932306,0.01367336,0.012017796,0.0010791784],"about_ca_topic_score_codex":0.000013011846,"about_ca_topic_score_gemma":0.000009338683,"teacher_disagreement_score":0.36015943,"about_ca_system_score_codex":0.000029910754,"about_ca_system_score_gemma":0.00029924058,"threshold_uncertainty_score":0.601887},"labels":[],"label_agreement":null},{"id":"W2982382229","doi":"10.1172/jci127341","title":"Effects of maternal iron status on placental and fetal iron homeostasis","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Iron Metabolism and Disorders","field":"Medicine","cited_by":193,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's & Women's Health Centre of British Columbia","funders":"National Institutes of Health; Clinical and Translational Science Institute, University of California, Los Angeles; David Geffen School of Medicine, University of California, Los Angeles; National Institute of Child Health and Human Development; Eunice Kennedy Shriver National Institute of Child Health and Human Development; Magee-Womens Research Institute; National Heart, Lung, and Blood Institute; National Center for Advancing Translational Sciences; Robert Wood Johnson Foundation","keywords":"Placenta; Iron deficiency; Fetus; Transferrin receptor; Hepcidin; Ferroportin; Fetal circulation; Trophoblast; Pregnancy; Biology; Transferrin; Physiology; Endocrinology; Internal medicine; Immunology; Medicine; Anemia; Inflammation","score_opus":0.022976220252405987,"score_gpt":0.33182477413775247,"score_spread":0.3088485538853465,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2982382229","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975528,0.000680504,0.00001706043,0.0004497175,0.0007642356,0.0002043365,0.0000035049675,0.0000053243043,0.00032249017],"genre_scores_gemma":[0.9971778,0.0007617527,0.0010608188,0.0005968658,0.000255157,5.369124e-7,0.000004898807,0.000012629581,0.00012956047],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982511,0.0001479488,0.00091021694,0.00012520778,0.00042119663,0.00014434154],"domain_scores_gemma":[0.9983619,0.0004180911,0.00073014817,0.000101063146,0.00009021057,0.00029860664],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006539692,0.00010832458,0.00052001426,0.00011624258,0.00001711987,0.000011814475,0.000049138875,0.00012633964,0.000048888243],"category_scores_gemma":[0.00079337385,0.00007968571,0.00014564929,0.000070365735,0.00016347166,0.00015527933,0.000019323348,0.0003391226,0.000021377129],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002627188,0.0003467512,0.9364335,0.0009161636,0.000040376694,0.000028950179,0.00022997327,0.000032468477,0.018103521,0.000367559,0.00070997846,0.040163565],"study_design_scores_gemma":[0.0066459565,0.0022371975,0.97485983,0.00033401456,0.00019524284,0.000032105374,0.000097014236,0.00007985508,0.014717023,0.00033875485,0.00038917738,0.0000738047],"about_ca_topic_score_codex":0.000016739315,"about_ca_topic_score_gemma":0.0000010206572,"teacher_disagreement_score":0.04008976,"about_ca_system_score_codex":0.000020938032,"about_ca_system_score_gemma":0.00013719455,"threshold_uncertainty_score":0.3249489},"labels":[],"label_agreement":null},{"id":"W2982755374","doi":"10.1172/jci132005","title":"Immune exclusion by naturally acquired secretory IgA against pneumococcal pilus-1","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Medical Research Council; U.S. Public Health Service; School of Medicine, New York University; York University","keywords":"Pilus; Microbiology; Biology; Mucus; Streptococcus pneumoniae; Immune system; Immunoglobulin A; Antibody; Colonization; Pathogen; Immunology; Immunoglobulin G; Gene; Escherichia coli; Genetics","score_opus":0.03485130849333248,"score_gpt":0.3464863087446178,"score_spread":0.3116350002512853,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2982755374","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9892398,0.000326397,0.000058837893,0.0062810467,0.0023546347,0.00026920033,0.0000035336986,0.000035097997,0.0014314145],"genre_scores_gemma":[0.9929757,0.0002353628,0.00022184588,0.0047213077,0.0009542272,0.0000021320989,0.000021905898,0.000024420015,0.0008431162],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9969034,0.00029239594,0.0018576597,0.00020278052,0.0005398805,0.00020384949],"domain_scores_gemma":[0.9971938,0.00041093345,0.0011752789,0.00026587961,0.0004917478,0.00046237477],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016806162,0.00017076312,0.00068548956,0.00015409861,0.00009695112,0.000029500581,0.00015330238,0.0003688589,0.00012186468],"category_scores_gemma":[0.0013881532,0.00012530044,0.00047895245,0.00023503894,0.00022013129,0.00037191578,0.0000515654,0.0008336279,0.00013559067],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000186288,0.00020295767,0.1105994,0.000054630855,0.0001103976,0.000032486183,0.000091527996,0.00003833322,0.8820742,0.000052132742,0.0033229622,0.0032347185],"study_design_scores_gemma":[0.0065747593,0.003325964,0.88699245,0.0009986379,0.00027392397,0.00033430988,0.00012828113,0.0012854306,0.019721372,0.00092944887,0.07908213,0.00035328817],"about_ca_topic_score_codex":0.0000026639011,"about_ca_topic_score_gemma":8.223138e-7,"teacher_disagreement_score":0.8623528,"about_ca_system_score_codex":0.00009017327,"about_ca_system_score_gemma":0.00046588012,"threshold_uncertainty_score":0.51096034},"labels":[],"label_agreement":null},{"id":"W2984584281","doi":"10.1172/jci128469","title":"Apelin directs endothelial cell differentiation and vascular repair following immune-mediated injury","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Apelin-related biomedical research","field":"Medicine","cited_by":66,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian VIGOUR Centre; University of Alberta","funders":"University of Alberta; Heart and Stroke Foundation of Canada","keywords":"Immune system; Cell biology; Apelin; Biology; Cell injury; Endothelial stem cell; Immunology; Genetics; Receptor; Apoptosis","score_opus":0.03509033401084228,"score_gpt":0.3613508731954672,"score_spread":0.32626053918462494,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2984584281","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961479,0.00065914984,0.00013704014,0.0014250798,0.0009900951,0.00035212716,0.0000027225788,0.000041748688,0.00024417168],"genre_scores_gemma":[0.9955664,0.0008718346,0.0018263516,0.0006277974,0.0006080781,0.0000020481332,0.00002827719,0.000027144593,0.0004420584],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9960387,0.00044497976,0.0018872248,0.00025245955,0.0011321396,0.00024453204],"domain_scores_gemma":[0.996595,0.0014063554,0.00080464396,0.0002460696,0.0003488287,0.00059908215],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0041638995,0.00015653977,0.0007239236,0.00023421494,0.000048381487,0.000030890205,0.0001174578,0.00041232695,0.00014176701],"category_scores_gemma":[0.008705951,0.00011567105,0.0005968768,0.00030331794,0.00017293805,0.00026665113,0.00006625808,0.0011940371,0.0001227272],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010939268,0.0005571129,0.54865,0.00032979317,0.000710354,0.000089146364,0.00026937842,0.000006033858,0.43339762,0.000058671598,0.0015061223,0.013331832],"study_design_scores_gemma":[0.009026604,0.0025575415,0.96171504,0.0009273422,0.0005488164,0.000020913792,0.00009724604,0.00825196,0.011251568,0.0008448766,0.0045335,0.00022458714],"about_ca_topic_score_codex":0.000012469815,"about_ca_topic_score_gemma":6.276278e-7,"teacher_disagreement_score":0.42214605,"about_ca_system_score_codex":0.00006431914,"about_ca_system_score_gemma":0.00044929294,"threshold_uncertainty_score":0.99964416},"labels":[],"label_agreement":null},{"id":"W2986356453","doi":"10.1172/jci126199","title":"Endogenous T cells prevent tumor immune escape following adoptive T cell therapy","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"CAR-T cell therapy research","field":"Medicine","cited_by":108,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University Medical Centre","funders":"Canadian Institutes of Health Research; Government of Ontario; Terry Fox Research Institute; Ontario Institute for Cancer Research","keywords":"Endogeny; Oncolytic virus; Immune system; Adoptive cell transfer; Blockade; Immune checkpoint; Cancer research; Immunology; Antigen; Biology; Cytotoxic T cell; T cell; Tumor antigen; Immunotherapy; Receptor; In vitro","score_opus":0.11018993887874642,"score_gpt":0.3819456765103028,"score_spread":0.27175573763155636,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2986356453","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99281484,0.001071294,0.000042185053,0.00086153415,0.0013282838,0.0007055143,0.0000014416694,0.000016455764,0.0031584566],"genre_scores_gemma":[0.9915493,0.0006261641,0.0023664613,0.0010263794,0.00086896925,0.000004212541,0.000006490025,0.000043250093,0.0035087322],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9962664,0.00048625743,0.0017912387,0.00023548248,0.0009269016,0.00029367825],"domain_scores_gemma":[0.9969683,0.0007926853,0.0010394306,0.0003593062,0.00041073564,0.00042951974],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0038193557,0.0001818615,0.00085121987,0.00016698346,0.00004835144,0.000039353643,0.00023006034,0.00016222516,0.0014539638],"category_scores_gemma":[0.00037556773,0.00013803998,0.0009022839,0.0002577023,0.00011529319,0.00022453257,0.00004047185,0.0010700879,0.00017634437],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011392225,0.0005676422,0.025220312,0.00004371724,0.00027099354,0.0001679031,0.0004191801,0.00006409829,0.9611679,0.000015401221,0.00043707652,0.010486608],"study_design_scores_gemma":[0.010853564,0.0070119705,0.04063337,0.00040584352,0.00018263247,0.0002064692,0.0003273565,0.0005131442,0.92972016,0.00086215494,0.00903398,0.00024934803],"about_ca_topic_score_codex":0.000015888309,"about_ca_topic_score_gemma":5.080711e-7,"teacher_disagreement_score":0.03144768,"about_ca_system_score_codex":0.00010965624,"about_ca_system_score_gemma":0.0007453301,"threshold_uncertainty_score":0.99945885},"labels":[],"label_agreement":null},{"id":"W2988184724","doi":"10.1172/jci124000","title":"KBTBD13 is an actin-binding protein that modulates muscle kinetics","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cardiomyopathy and Myosin Studies","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Child Health and Human Development; Medical Research Council; National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute of General Medical Sciences; National Health and Medical Research Council; Horizon 2020 Framework Programme; Office of Science; National Institutes of Health; National Heart, Lung, and Blood Institute; Vetenskapsrådet; Muscular Dystrophy Association; Argonne National Laboratory; Eunice Kennedy Shriver National Institute of Child Health and Human Development; U.S. Department of Energy","keywords":"Sarcomere; Actin; Contractility; Muscle relaxation; Nebulin; Biophysics; Nemaline myopathy; Kinetics; Myosin; Cell biology; Myofibril; Muscle contraction; Biology; Chemistry; Myocyte; Endocrinology; Titin","score_opus":0.1433240334916489,"score_gpt":0.38795261475187626,"score_spread":0.24462858126022735,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2988184724","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949634,0.00011772448,0.00005615661,0.003186169,0.0007284338,0.0002582759,0.0000021623173,0.00001623729,0.0006714289],"genre_scores_gemma":[0.9937968,0.00008201429,0.0035342425,0.00083633343,0.0009400338,0.0000017877584,0.000003958556,0.000016578098,0.0007882165],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982261,0.00013311103,0.0008964867,0.00016111319,0.00043782208,0.00014535969],"domain_scores_gemma":[0.99825764,0.00021073529,0.0007482856,0.00021094478,0.0003150823,0.0002573167],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013848622,0.000116366464,0.00056781666,0.000094903764,0.000041219002,0.000030271352,0.00008277788,0.00015352023,0.00006472295],"category_scores_gemma":[0.00092643633,0.0000884125,0.0002889366,0.00012884322,0.00011942091,0.00029653608,0.000032686487,0.00047183165,0.00003970922],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006688412,0.0004997113,0.55955124,0.0002618132,0.00043259255,0.00008509591,0.0018479815,0.000054717675,0.39261508,0.0002822448,0.004048158,0.039652493],"study_design_scores_gemma":[0.004925088,0.0043494655,0.8224066,0.0012427702,0.00056935195,0.00020796855,0.0013576108,0.0008189731,0.14667131,0.0031981177,0.013941579,0.0003111629],"about_ca_topic_score_codex":0.000004973972,"about_ca_topic_score_gemma":9.4310207e-7,"teacher_disagreement_score":0.26285535,"about_ca_system_score_codex":0.000034254368,"about_ca_system_score_gemma":0.000103815575,"threshold_uncertainty_score":0.36053568},"labels":[],"label_agreement":null},{"id":"W2991802127","doi":"10.1172/jci130206","title":"DGCR8 microprocessor defect characterizes familial multinodular goiter with schwannomatosis","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Thyroid Cancer Diagnosis and Treatment","field":"Medicine","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto; University Health Network; McGill University Health Centre; University of Calgary; McGill University; Montreal Children's Hospital; McGill University and Génome Québec Innovation Centre; Jewish General Hospital","funders":"Jewish General Hospital; Compute Canada; Banca d'Italia; McGill University; Canadian Institutes of Health Research; Alex's Lemonade Stand Foundation for Childhood Cancer","keywords":"Loss of heterozygosity; Biology; microRNA; Pathology; Genetics; Cancer research; Medicine; Allele; Gene","score_opus":0.035552435803936154,"score_gpt":0.33442134046498045,"score_spread":0.2988689046610443,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2991802127","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959011,0.00036478162,0.00004476265,0.0027235097,0.0005217102,0.000277125,0.000004682823,0.000015190126,0.00014714526],"genre_scores_gemma":[0.99189043,0.00020381017,0.0054230867,0.0016078124,0.0006558381,0.0000070683395,0.000010860688,0.000022554956,0.00017850856],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981164,0.00009181871,0.0010628275,0.0002002757,0.0003750389,0.00015364388],"domain_scores_gemma":[0.9980018,0.00021852496,0.000933124,0.0001959676,0.00037525283,0.00027534473],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006248904,0.00015040705,0.00063378783,0.00009003905,0.000030284182,0.000033117147,0.00008115312,0.00012602554,0.00008244816],"category_scores_gemma":[0.00028785778,0.00009403965,0.0003324304,0.00013372711,0.00011134521,0.00024375714,0.00001554269,0.0003512894,0.00008717179],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00092202594,0.00033186952,0.97722405,0.00009441738,0.0003466526,0.00005799896,0.00010479464,0.000007805944,0.015822805,0.000043458196,0.0005476346,0.004496506],"study_design_scores_gemma":[0.007304608,0.0035374358,0.9607879,0.00082099834,0.00048500136,0.0001660059,0.000050453113,0.00008504825,0.02179616,0.000097281016,0.004733431,0.0001356716],"about_ca_topic_score_codex":0.000013923542,"about_ca_topic_score_gemma":0.0000032488442,"teacher_disagreement_score":0.016436124,"about_ca_system_score_codex":0.00005655382,"about_ca_system_score_gemma":0.00028822816,"threshold_uncertainty_score":0.38348258},"labels":[],"label_agreement":null},{"id":"W2993062663","doi":"10.1172/jci131145","title":"Lysine acetyltransferase 8 is involved in cerebral development and syndromic intellectual disability","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":69,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Centre Hospitalier Universitaire Sainte-Justine; McGill University Health Centre","funders":"National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada; National Cancer Institute; National Institutes of Health; Canadian Institutes of Health Research; China Scholarship Council; Cancer Research Society; Wellcome Trust; McGill University","keywords":"Histone H4; Neurogenesis; Epigenetics; Neuroscience; Neocortex; Acetylation; Neural stem cell; Biology; Neurosphere; Rett syndrome; Cell biology; Genetics; Cellular differentiation; Stem cell; Gene; Adult stem cell","score_opus":0.04989035214837536,"score_gpt":0.33595471739953575,"score_spread":0.2860643652511604,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2993062663","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99833995,0.0003318405,0.00050322234,0.0004976088,0.00018468472,0.00010458841,0.0000012305877,0.0000014165371,0.00003542923],"genre_scores_gemma":[0.9964819,0.00022894422,0.0028499488,0.00024770288,0.00012653829,0.0000010067737,0.000014742494,0.000007648573,0.000041567557],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984948,0.0001599892,0.0009327492,0.00017680204,0.00013895395,0.00009672998],"domain_scores_gemma":[0.9992955,0.00013945112,0.00022900965,0.00012089754,0.00009694561,0.000118249474],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001375474,0.000088328896,0.00023978198,0.00003638399,0.000018096818,0.000016542137,0.000079530735,0.000160451,0.000027430986],"category_scores_gemma":[0.00081270275,0.00007599605,0.00007662878,0.000075971366,0.00012298144,0.000011517432,0.000030901396,0.00019094544,0.000005215511],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001676938,0.00009775088,0.8960582,0.000028956076,0.0000371168,9.973369e-7,0.00036624202,0.000075614604,0.09187879,0.000017536422,0.00007754214,0.011193561],"study_design_scores_gemma":[0.001776067,0.0007006561,0.5501901,0.00007061168,0.000018933915,0.0000044933067,0.00010724947,0.00045566505,0.44255856,0.0010515992,0.002908339,0.00015774324],"about_ca_topic_score_codex":0.000005798349,"about_ca_topic_score_gemma":0.000038392896,"teacher_disagreement_score":0.35067976,"about_ca_system_score_codex":0.000018173318,"about_ca_system_score_gemma":0.00016400893,"threshold_uncertainty_score":0.3099029},"labels":[],"label_agreement":null},{"id":"W2995637865","doi":"10.1172/jci130819","title":"Ivermectin inhibits HSP27 and potentiates efficacy of oncogene targeting in tumor models","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Helminth infection and control","field":"Veterinary","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of General Medical Sciences; Canadian Institutes of Health Research; Terry Fox Foundation; Michael Smith Health Research BC; Prostate Cancer Canada; Prostate Cancer Foundation","keywords":"Ivermectin; Oncogene; Pharmacology; Cancer research; Hsp27; Medicine; Biology; Immunology; Bioinformatics; Heat shock protein; Cancer; Internal medicine; Genetics; Hsp70; Cell cycle; Veterinary medicine; Gene","score_opus":0.10718498204008085,"score_gpt":0.38666637902328954,"score_spread":0.2794813969832087,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2995637865","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99830055,0.00015274376,0.00019459742,0.0003828954,0.0004181187,0.00014597141,0.0000015082848,0.000007844855,0.00039579652],"genre_scores_gemma":[0.9983123,0.000035666508,0.0010611359,0.0003416621,0.00020371216,9.1390143e-7,0.0000013924167,0.000010212838,0.000033010332],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99752027,0.00035574118,0.0016495142,0.00013537302,0.00022118428,0.00011791108],"domain_scores_gemma":[0.9977558,0.00067793595,0.0011180554,0.00008788633,0.00022053391,0.00013975157],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023530747,0.00009185408,0.00044854218,0.00014639377,0.000021414882,0.000018081806,0.00007725565,0.00010393601,0.00007244646],"category_scores_gemma":[0.0019064627,0.00007784704,0.0001483548,0.00014141508,0.000075328964,0.00035038343,0.00003501546,0.00038819332,0.000017892991],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025341557,0.00075271603,0.7561143,0.00022916426,0.00020776996,0.000113156166,0.0013340835,0.0051410953,0.20902184,0.0016483263,0.00075454364,0.022148846],"study_design_scores_gemma":[0.015650611,0.0050932043,0.84268105,0.0013264723,0.0001551407,0.00035014254,0.0005384564,0.09339462,0.020970106,0.0186962,0.0006885155,0.00045547148],"about_ca_topic_score_codex":0.000028622037,"about_ca_topic_score_gemma":0.0000030246904,"teacher_disagreement_score":0.18805173,"about_ca_system_score_codex":0.00002138049,"about_ca_system_score_gemma":0.00011621807,"threshold_uncertainty_score":0.31745103},"labels":[],"label_agreement":null},{"id":"W2997784912","doi":"10.1172/jci129301","title":"Distinct interferon signatures and cytokine patterns define additional systemic autoinflammatory diseases","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Systemic Lupus Erythematosus Research","field":"Medicine","cited_by":239,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Izaak Walton Killam Health Centre; Children's Hospital of Eastern Ontario; Dalhousie University; Hospital for Sick Children; Janeway Children's Health and Rehabilitation Centre; Alberta Children's Hospital","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute of Allergy and Infectious Diseases; NIH Clinical Center; National Institutes of Health","keywords":"Cytokine; Interferon; Immunology; Medicine; Computational biology; Biology","score_opus":0.042444035500891035,"score_gpt":0.348151730172949,"score_spread":0.30570769467205794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2997784912","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99705863,0.00076509407,0.000099711964,0.00084600033,0.0005731021,0.00033520636,0.00014077025,0.000022729895,0.00015872803],"genre_scores_gemma":[0.9977311,0.00011234651,0.00029939495,0.00026218462,0.0010852347,0.000007710528,0.00012584517,0.000024261139,0.0003519487],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9969024,0.00031787713,0.0016275963,0.00021753466,0.00075654057,0.00017806885],"domain_scores_gemma":[0.9961238,0.0017379657,0.0009635619,0.0002231824,0.00048012033,0.00047135155],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012888688,0.00015418314,0.0007182493,0.0001870641,0.00003497464,0.000036664555,0.0001253237,0.00018236914,0.00086698035],"category_scores_gemma":[0.0031709303,0.0001095283,0.00022464825,0.000107363434,0.00017730822,0.00022269554,0.000060345665,0.00063370937,0.000063937914],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00058840995,0.00008353246,0.9841319,0.00096621556,0.0001476246,0.00008775853,0.000077218916,0.000007258069,0.0021241338,0.00019679521,0.010165087,0.0014240847],"study_design_scores_gemma":[0.0043307976,0.0015626394,0.9747439,0.0077411067,0.00020080897,0.006994949,0.00021744113,0.0013223724,0.00025196045,0.0008869559,0.0015703549,0.00017669641],"about_ca_topic_score_codex":0.0000032863377,"about_ca_topic_score_gemma":0.000002348667,"teacher_disagreement_score":0.009387963,"about_ca_system_score_codex":0.000094024945,"about_ca_system_score_gemma":0.00044784773,"threshold_uncertainty_score":0.9492827},"labels":[],"label_agreement":null},{"id":"W2999376644","doi":"10.1172/jci130363","title":"The glucocorticoid receptor–FKBP51 complex contributes to fear conditioning and posttraumatic stress disorder","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Hormonal Regulation and Hypertension","field":"Medicine","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Centre for Addiction and Mental Health","funders":"National Institute of Mental Health; Canadian Institutes of Health Research; Centre for Addiction and Mental Health","keywords":"Glucocorticoid receptor; Posttraumatic stress; Anxiety; Major depressive disorder; Anxiety disorder; Psychology; Glucocorticoid; Fear conditioning; Internal medicine; Clinical psychology; Medicine; Psychiatry","score_opus":0.13093240032680462,"score_gpt":0.38681645987565694,"score_spread":0.2558840595488523,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2999376644","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.89025044,0.00029358818,0.00053091726,0.10841521,0.00014497078,0.00023023594,0.0000032040623,0.000008880832,0.00012255053],"genre_scores_gemma":[0.98735577,0.00014433917,0.0012468061,0.010903514,0.0002701925,0.0000012559576,0.000014067095,0.000008985653,0.00005509257],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983606,0.00013815434,0.000995329,0.00010217767,0.00030574753,0.00009799105],"domain_scores_gemma":[0.9978271,0.0008744503,0.00043311532,0.00007720597,0.00041517083,0.0003729267],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000688072,0.00007684825,0.00037952777,0.000036224825,0.00011592955,0.000055170396,0.000056834007,0.0000709746,0.000042239993],"category_scores_gemma":[0.0051582614,0.000047943005,0.000098188444,0.00014536246,0.00016438961,0.00008845343,0.000023056145,0.00027759356,0.000026015441],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0028927994,0.00030922444,0.7482806,0.00022306791,0.00063238,0.000047211928,0.0014604615,0.00064051256,0.096429676,0.011537193,0.03276415,0.10478276],"study_design_scores_gemma":[0.0023240508,0.0012017818,0.9439855,0.00028443563,0.00013717197,0.000033021308,0.0005351309,0.008101371,0.000839373,0.0007929015,0.041691184,0.00007404605],"about_ca_topic_score_codex":0.000003158527,"about_ca_topic_score_gemma":0.0000038296803,"teacher_disagreement_score":0.19570497,"about_ca_system_score_codex":0.00001667632,"about_ca_system_score_gemma":0.00012869484,"threshold_uncertainty_score":0.61752933},"labels":[],"label_agreement":null},{"id":"W2999811208","doi":"10.1172/jci128459","title":"Capsular glycan recognition provides antibody-mediated immunity against tuberculosis","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Glycomics Centre; University of Alberta","funders":"National Center for Advancing Translational Sciences; Alberta Glycomics Centre; Canadian Glycomics Network; National Institutes of Health; National Cancer Institute; National Institute of Allergy and Infectious Diseases; Bill and Melinda Gates Foundation","keywords":"Tuberculosis; Mycobacterium tuberculosis; Immunology; Glycan; Epitope; Antigen; Antibody; Immune system; Vaccination; Immunity; Latent tuberculosis; Tuberculosis vaccines; Biology; Virology; Medicine; Microbiology","score_opus":0.16370791324592396,"score_gpt":0.42565135722316594,"score_spread":0.261943443977242,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2999811208","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9272961,0.0002816347,0.00017840881,0.07136586,0.00021933598,0.0002442754,0.000012277878,0.000031130436,0.00037098053],"genre_scores_gemma":[0.9707937,0.0019374229,0.0033419188,0.02217832,0.0014653105,0.000003499167,0.00024653057,0.00002124803,0.000012006432],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9957937,0.0011427761,0.002088642,0.00021325792,0.00048802202,0.00027362962],"domain_scores_gemma":[0.9954236,0.0014000337,0.000951261,0.00018151563,0.00086140085,0.0011821759],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.003538469,0.00015343189,0.0008578631,0.000134096,0.00007459626,0.000024952187,0.00015361916,0.0002943151,0.000088159395],"category_scores_gemma":[0.050249454,0.00011680911,0.00041414556,0.00039388795,0.00033672544,0.00033344212,0.000044409207,0.0013883056,0.000120439625],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002718898,0.00055677776,0.67776126,0.00041446078,0.0009260234,0.0003116492,0.0005659657,0.00005630446,0.21873417,0.000042402797,0.032513,0.06539909],"study_design_scores_gemma":[0.007119985,0.006905501,0.938677,0.000823074,0.0005405439,0.00019524292,0.0004079882,0.0137544535,0.01296245,0.0025538425,0.015686441,0.0003734934],"about_ca_topic_score_codex":0.00005230219,"about_ca_topic_score_gemma":0.0000055813657,"teacher_disagreement_score":0.26091573,"about_ca_system_score_codex":0.00005426496,"about_ca_system_score_gemma":0.00054444384,"threshold_uncertainty_score":0.9577507},"labels":[],"label_agreement":null},{"id":"W3003004415","doi":"10.1172/jci99934","title":"Cardioprotective GLP-1 metabolite prevents ischemic cardiac injury by inhibiting mitochondrial trifunctional protein-α","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Diabetes Treatment and Management","field":"Medicine","cited_by":77,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; Heart and Stroke Foundation; University Health Network; Toronto General Hospital; University of Toronto; Ted Rogers Centre for Heart Research","funders":"Canadian Institutes of Health Research; Novo Nordisk; University of Toronto; Toronto General Hospital Research Institute, University Health Network; Heart and Stroke Foundation of Canada","keywords":"Glycolysis; Chemistry; Glucagon-like peptide-1; Biochemistry; Internal medicine; Pharmacology; Endocrinology; Cell biology; Biology; Metabolism; Medicine","score_opus":0.045910617349171255,"score_gpt":0.3288346081097357,"score_spread":0.28292399076056446,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3003004415","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99145216,0.0005340062,0.00055601046,0.004540874,0.0007830729,0.0009677249,0.000022114362,0.000030111603,0.0011139023],"genre_scores_gemma":[0.98639345,0.00007365061,0.0063333916,0.0019006418,0.0045253458,0.000044880027,0.00006253864,0.000029221228,0.00063690107],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997377,0.00021853512,0.001335534,0.00024645007,0.000643765,0.00017872457],"domain_scores_gemma":[0.99804705,0.000107273896,0.0009633659,0.00010507941,0.00030241234,0.00047483132],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008775602,0.0001717554,0.0007832048,0.000071297436,0.00005196456,0.00003324034,0.00008304312,0.00015181038,0.00003027023],"category_scores_gemma":[0.001887476,0.0001376943,0.00057855126,0.0002357158,0.00011017244,0.00032708113,0.00004589416,0.00058479555,0.000024988065],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004826716,0.0006605646,0.058092657,0.0003702051,0.004657713,0.000050365856,0.000648058,0.000026915213,0.71417975,0.00027449918,0.14774211,0.068470426],"study_design_scores_gemma":[0.018348627,0.008517925,0.03534412,0.0011134384,0.0045853388,0.000015132696,0.00040433469,0.00039612583,0.72224915,0.002452466,0.20590983,0.0006635079],"about_ca_topic_score_codex":0.0000043203095,"about_ca_topic_score_gemma":4.1503885e-8,"teacher_disagreement_score":0.067806914,"about_ca_system_score_codex":0.000062886116,"about_ca_system_score_gemma":0.00024003272,"threshold_uncertainty_score":0.561501},"labels":[],"label_agreement":null},{"id":"W3003611811","doi":"10.1172/jci131700","title":"Cytotoxic CD4+ T lymphocytes may induce endothelial cell apoptosis in systemic sclerosis","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Systemic Sclerosis and Related Diseases","field":"Medicine","cited_by":187,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke; Institute of Infection and Immunity","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Cytotoxic T cell; Immunology; CD8; Fibrosis; Apoptosis; Immune system; Biology; T cell; Pathogenesis; Scleroderma (fungus); Medicine; Cancer research; Pathology; In vitro","score_opus":0.1309557769457165,"score_gpt":0.3386674251786355,"score_spread":0.20771164823291902,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3003611811","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99341434,0.0018585855,0.000042964733,0.003415158,0.00070214854,0.00030162116,0.000007600259,0.00002626995,0.00023131496],"genre_scores_gemma":[0.9923214,0.002383847,0.0005881999,0.0031194554,0.0015103554,0.0000029720168,0.000005385833,0.00002764636,0.00004076304],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99593645,0.0003963742,0.0026239834,0.00025394332,0.00058337307,0.0002058696],"domain_scores_gemma":[0.9968881,0.000530783,0.0013852472,0.00017288895,0.00026772948,0.0007552482],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013597431,0.00018142215,0.00089778967,0.00016233968,0.00003839877,0.000037318347,0.00017854135,0.00031244874,0.000048666105],"category_scores_gemma":[0.002832227,0.0001353518,0.000436354,0.00044223882,0.0001364658,0.00020929144,0.000032792588,0.000588173,0.000075164375],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011022848,0.0004672604,0.26480347,0.00053014106,0.00018873629,0.00005027688,0.0011902075,0.00029917306,0.7196825,0.000046217338,0.004938194,0.0067015137],"study_design_scores_gemma":[0.025584515,0.0033780995,0.4091947,0.019867534,0.0011903918,0.00030403628,0.002545006,0.0032035746,0.53354204,0.00018748284,0.00040240193,0.00060019875],"about_ca_topic_score_codex":0.000020526995,"about_ca_topic_score_gemma":5.2142957e-7,"teacher_disagreement_score":0.1861405,"about_ca_system_score_codex":0.00013080031,"about_ca_system_score_gemma":0.00072298106,"threshold_uncertainty_score":0.55194867},"labels":[],"label_agreement":null},{"id":"W3004522818","doi":"10.1172/jci131048","title":"Chronic mTOR activation induces a degradative smooth muscle cell phenotype","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"PI3K/AKT/mTOR signaling in cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":104,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Artificial Intelligence in Medicine (Canada)","funders":"National Heart, Lung, and Blood Institute; National Institutes of Health; National Natural Science Foundation of China; National Center for Advancing Translational Sciences; Yale University","keywords":"Phenotype; PI3K/AKT/mTOR pathway; Cell biology; Cell; Cell growth; Cancer research; Chemistry; Medicine; Biology; Signal transduction; Biochemistry; Gene","score_opus":0.08338730667937345,"score_gpt":0.35086320123678755,"score_spread":0.2674758945574141,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3004522818","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9921144,0.00045052255,0.0038238023,0.002824907,0.00040448402,0.00009511845,0.000004195096,0.000007030398,0.00027550722],"genre_scores_gemma":[0.9910959,0.000112645976,0.0028011275,0.0020330523,0.0038757368,0.0000025344211,0.000022731947,0.000018779556,0.000037514546],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983826,0.00021487012,0.00080938905,0.00021113291,0.0002548218,0.00012718674],"domain_scores_gemma":[0.9982298,0.000115226576,0.0009910048,0.00012746945,0.00030334806,0.0002331335],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006258186,0.00011874381,0.0002416984,0.000029448745,0.000044568285,0.00002749217,0.00021136817,0.00021080884,0.000036237485],"category_scores_gemma":[0.0016007053,0.000103952465,0.00015938048,0.0001380183,0.00013069739,0.000027191962,0.000041916148,0.00035991188,0.000010717448],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001394419,0.000038674938,0.0020688935,0.000026823001,0.000047720132,0.0000018380481,0.0001363775,0.0004185333,0.98090136,0.00002888307,0.0049166977,0.011274731],"study_design_scores_gemma":[0.0017072883,0.0029250393,0.0244988,0.000092436196,0.00007048279,0.0000016398732,0.000086913205,0.00039093246,0.91790277,0.00059912447,0.051498115,0.00022645324],"about_ca_topic_score_codex":0.0000055855285,"about_ca_topic_score_gemma":0.000002772668,"teacher_disagreement_score":0.06299861,"about_ca_system_score_codex":0.000039131115,"about_ca_system_score_gemma":0.00079089357,"threshold_uncertainty_score":0.42390585},"labels":[],"label_agreement":null},{"id":"W3004775388","doi":"10.1172/jci132374","title":"BCL-2 antagonism sensitizes cytotoxic T cell–resistant HIV reservoirs to elimination ex vivo","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":129,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Maple Leaf Medical Clinic","funders":"College of Veterinary Medicine, Cornell University; National Institute of Child Health and Human Development; National Institute of Allergy and Infectious Diseases; National Institute on Drug Abuse; National Institute of Mental Health; Fogarty International Center; National Heart, Lung, and Blood Institute; Center for AIDS Research, University of Washington; Office of AIDS Research; National Institute on Aging; National Cancer Institute; National Institutes of Health","keywords":"CTL*; Ex vivo; Cytotoxic T cell; Biology; Immunology; In vivo; Immunotherapy; Cancer research; T cell; Virology; CD8; Immune system; In vitro; Genetics","score_opus":0.0771924329056798,"score_gpt":0.3522961637039018,"score_spread":0.27510373079822203,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3004775388","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9621511,0.0003117137,0.00046513314,0.035808425,0.00042624713,0.00023056133,0.00005193313,0.000022057817,0.0005327919],"genre_scores_gemma":[0.99560636,0.00016390938,0.0013333741,0.0017840854,0.00032643677,0.0000032507535,0.000060691993,0.000013852879,0.0007080452],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974206,0.00073256553,0.0012067575,0.0002202536,0.00016524462,0.0002545807],"domain_scores_gemma":[0.9979697,0.0006629893,0.00055077724,0.00015156866,0.00035650583,0.0003084686],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0012805508,0.00013836547,0.00044042617,0.000113526985,0.00011662761,0.000034592045,0.00020211989,0.0002177079,0.00018006157],"category_scores_gemma":[0.0023166912,0.00010738627,0.00021018222,0.00020695363,0.00019435746,0.00018172631,0.000062200066,0.00055944046,0.0011521379],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013739894,0.00019160254,0.0040433602,0.000035603458,0.00015903401,0.00011901043,0.0007721868,0.000076091565,0.9311297,0.00017283758,0.05975215,0.002174428],"study_design_scores_gemma":[0.0057769725,0.0051235263,0.046976894,0.00013632707,0.00014964145,0.00006464211,0.0006545057,0.00009985829,0.86902523,0.0008120342,0.07090912,0.0002712713],"about_ca_topic_score_codex":0.00000947591,"about_ca_topic_score_gemma":0.000006015338,"teacher_disagreement_score":0.062104493,"about_ca_system_score_codex":0.000049626728,"about_ca_system_score_gemma":0.0002848053,"threshold_uncertainty_score":0.99962556},"labels":[],"label_agreement":null},{"id":"W3004964052","doi":"10.1172/jci134402","title":"Epigenetic driver mutations in ARID1A shape cancer immune phenotype and immunotherapy","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Chromatin Remodeling and Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":200,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"Rogel Cancer Center, University of Michigan; National Cancer Institute; National Institutes of Health; College of Pharmacy, University of Michigan; Ovarian Cancer Research Alliance; National Institute of Allergy and Infectious Diseases; National Cancer Center; University of Michigan","keywords":"ARID1A; Epigenetics; Biology; Cancer research; Immune system; Cancer; Immunotherapy; Chromatin; Cancer immunotherapy; EZH2; Phenotype; Immunology; Cancer cell; Gene; Mutation; Genetics","score_opus":0.05520385444857682,"score_gpt":0.3615813248961588,"score_spread":0.30637747044758196,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3004964052","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9922706,0.0039630425,0.00084312493,0.0026525958,0.00017405894,0.000058458816,0.0000024990622,0.0000024085969,0.000033244232],"genre_scores_gemma":[0.99299026,0.0027723736,0.0020637966,0.001611271,0.000522228,0.0000023725881,0.000007473508,0.000010451484,0.000019801466],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988682,0.00009791322,0.0007232089,0.0001258516,0.000107140935,0.00007765912],"domain_scores_gemma":[0.99929786,0.0000455756,0.00036005117,0.00007140199,0.00012050019,0.000104610976],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037160068,0.00007217497,0.00019851969,0.00002247448,0.000025202105,0.000015443744,0.00008580944,0.00010573979,0.00003031312],"category_scores_gemma":[0.00038791256,0.00006354248,0.00008358466,0.00007954761,0.00010743945,0.000008143904,0.000019491228,0.00018131563,0.0000016572864],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040850652,0.00008034434,0.11215607,0.000044096312,0.00015038978,0.0000060205534,0.00081234577,0.0070965993,0.7725633,0.00005150013,0.00064613204,0.1059847],"study_design_scores_gemma":[0.006935653,0.0019675929,0.84762645,0.00030707216,0.0001242951,0.000021368709,0.00027147305,0.047601372,0.080727,0.004269865,0.009656091,0.0004917512],"about_ca_topic_score_codex":0.000019370545,"about_ca_topic_score_gemma":0.000013720504,"teacher_disagreement_score":0.7354704,"about_ca_system_score_codex":0.000009097605,"about_ca_system_score_gemma":0.00020769174,"threshold_uncertainty_score":0.2591187},"labels":[],"label_agreement":null},{"id":"W3006103160","doi":"10.1172/jci134066","title":"Distinct immune characteristics distinguish hereditary and idiopathic chronic pancreatitis","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pancreatitis Pathology and Treatment","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; National Pancreas Foundation; National Institute of Diabetes and Digestive and Kidney Diseases; University of Minnesota; Howard Hughes Medical Institute","keywords":"Immune system; Pancreatitis; Immunology; T-cell receptor; Pathogenesis; Acquired immune system; Biology; Repertoire; Immunophenotyping; Innate immune system; T cell; Medicine; Antigen; Internal medicine","score_opus":0.05965749475583453,"score_gpt":0.34174498156788086,"score_spread":0.2820874868120463,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3006103160","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99053955,0.0030547252,0.00027239264,0.005225698,0.0004417003,0.00012982909,0.000013773007,0.000021147942,0.0003011599],"genre_scores_gemma":[0.99466175,0.00076179364,0.001317351,0.0009864613,0.0021894786,0.000002650785,0.000031357195,0.000014375956,0.000034765544],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99790233,0.00021073283,0.0013648567,0.0001730826,0.00021553175,0.00013343332],"domain_scores_gemma":[0.99811953,0.0002957943,0.00088131125,0.00011658717,0.0002169369,0.0003698211],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00079249084,0.0001348006,0.0007905903,0.00003378,0.000066719294,0.000016245996,0.000059400412,0.00016212254,0.000035204062],"category_scores_gemma":[0.005704686,0.00010562013,0.00016803667,0.00009644173,0.00033757463,0.00011536503,0.00003130648,0.0005605896,0.000016026088],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003227925,0.00010194125,0.9696285,0.0001761348,0.00018719776,0.0021613515,0.00019026606,4.8163395e-7,0.001054515,0.00019282658,0.0003034271,0.025680525],"study_design_scores_gemma":[0.0023400425,0.0027016788,0.9904708,0.0005299064,0.0005072825,0.001254494,0.000016431235,0.00032092023,0.0003662857,0.00057735626,0.0008257524,0.00008901455],"about_ca_topic_score_codex":0.000007132514,"about_ca_topic_score_gemma":0.0000015592206,"teacher_disagreement_score":0.02559151,"about_ca_system_score_codex":0.000041006257,"about_ca_system_score_gemma":0.00032415977,"threshold_uncertainty_score":0.68294543},"labels":[],"label_agreement":null},{"id":"W3007256318","doi":"10.1172/jci133572","title":"Muscle-derived interleukin 6 increases exercise capacity by signaling in osteoblasts","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Exercise and Physiological Responses","field":"Medicine","cited_by":133,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institute of Diabetes and Digestive and Kidney Diseases; Institut de Recherche Clinique De Montréal; Yale University; Ministerio de Economía y Competitividad; National Institute of Immunology; National Institute on Aging; European Regional Development Fund; TrygFonden","keywords":"Osteocalcin; Endocrinology; Internal medicine; Crosstalk; Physical exercise; Catabolism; Bone remodeling; Receptor; Medicine; Chemistry; Alkaline phosphatase; Biochemistry; Metabolism","score_opus":0.12384410159376319,"score_gpt":0.3658566209451041,"score_spread":0.24201251935134094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3007256318","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99662024,0.00022994728,0.00010788169,0.002725236,0.000089625224,0.00015372685,0.00000458829,0.00001578681,0.000052985415],"genre_scores_gemma":[0.9931161,0.00030023325,0.0016481986,0.004495232,0.0004048452,0.0000024030817,0.000008142637,0.000011607412,0.000013228063],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9974303,0.0003904367,0.001518293,0.00018273297,0.00032757487,0.00015063117],"domain_scores_gemma":[0.9971014,0.0013124315,0.0006635671,0.00009822105,0.00021467579,0.0006096824],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010925756,0.00013187561,0.0007612164,0.000069634996,0.000024402932,0.000019060879,0.00012410722,0.0001834755,0.00010181687],"category_scores_gemma":[0.008030584,0.00009633487,0.00025617407,0.00024079789,0.00019778735,0.00019950212,0.000034184854,0.00069273345,0.00002013098],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0062305056,0.0004807955,0.0693372,0.00012522638,0.000051341907,0.00015198678,0.0008538731,0.00007243045,0.893124,0.00002451201,0.0040015895,0.025546554],"study_design_scores_gemma":[0.0081142755,0.0062548844,0.6610439,0.003667655,0.00033573183,0.000041994783,0.00067420653,0.0014363644,0.31127185,0.0048583155,0.0019030038,0.0003978289],"about_ca_topic_score_codex":0.00003158604,"about_ca_topic_score_gemma":0.0000027673861,"teacher_disagreement_score":0.5917067,"about_ca_system_score_codex":0.00002875402,"about_ca_system_score_gemma":0.00019576168,"threshold_uncertainty_score":0.9613939},"labels":[],"label_agreement":null},{"id":"W3007590143","doi":"10.1172/jci131254","title":"Protein arginine methyltransferase 5 promotes cholesterol biosynthesis–mediated Th17 responses and autoimmunity","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cancer-related gene regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Center for Advancing Translational Sciences; National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; Research Institute, Nationwide Children's Hospital; National Cancer Institute; National Institutes of Health; Nationwide Children's Hospital; Pelotonia; Ohio State University","keywords":"Protein arginine methyltransferase 5; Experimental autoimmune encephalomyelitis; RAR-related orphan receptor gamma; Orphan receptor; Arginine; Cell biology; Biology; Chemistry; Methyltransferase; Biochemistry; Immunology; Immune system; Methylation; FOXP3; Transcription factor; Amino acid","score_opus":0.06269572043454023,"score_gpt":0.33798130922495645,"score_spread":0.2752855887904162,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3007590143","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9870492,0.00047485557,0.0012533843,0.01085977,0.00009823182,0.00023072492,0.000010243461,0.000010167263,0.000013384727],"genre_scores_gemma":[0.9963293,0.0001997602,0.0021421073,0.0007091921,0.0005401854,0.0000040905525,0.000025877966,0.000016668835,0.000032826087],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979928,0.00059036806,0.00092717865,0.00018840078,0.00019327588,0.00010799258],"domain_scores_gemma":[0.99868125,0.0001697487,0.00053793594,0.00014090561,0.00021983316,0.00025033386],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013303747,0.00012420087,0.00029306224,0.000049010785,0.000051050523,0.00003054839,0.000121971396,0.0002440118,0.000009935733],"category_scores_gemma":[0.00522258,0.00010600174,0.00012260751,0.00013173552,0.00023432198,0.00002115162,0.000031925778,0.00032717283,0.0000028931215],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00081078126,0.00004655811,0.005644366,0.000031887757,0.00009873434,0.0000025989616,0.0001127548,0.00007171479,0.98461276,0.000010513749,0.00022220345,0.008335148],"study_design_scores_gemma":[0.0020465988,0.0022854516,0.114605,0.00015085327,0.00010397703,0.000030163375,0.00004173803,0.0015109101,0.87366015,0.00031111142,0.0050571333,0.0001969239],"about_ca_topic_score_codex":0.000005078755,"about_ca_topic_score_gemma":0.00000488301,"teacher_disagreement_score":0.1109526,"about_ca_system_score_codex":0.00000865345,"about_ca_system_score_gemma":0.00026127888,"threshold_uncertainty_score":0.62522936},"labels":[],"label_agreement":null},{"id":"W3009853057","doi":"10.1172/jci130670","title":"Ubiquitous antigen-specific T regulatory type 1 cells variably suppress hepatic and extrahepatic autoimmunity","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; Multiple Sclerosis Society; Crohn's and Colitis Foundation of Canada; Diabetes Canada; Multiple Sclerosis Society of Canada; Crohn's and Colitis Foundation","keywords":"Autoimmunity; Experimental autoimmune encephalomyelitis; Immunology; Biology; Antigen; Autoimmune disease; Central tolerance; Epitope; Inflammation; Immune system; Antibody","score_opus":0.07243072320524774,"score_gpt":0.30803975876400697,"score_spread":0.23560903555875923,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3009853057","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9896556,0.0020189423,0.00047566113,0.0010605815,0.0064061587,0.00011192033,0.0000012110802,0.000029284005,0.00024060621],"genre_scores_gemma":[0.9958694,0.0015468779,0.0004899939,0.0013901183,0.00026917842,8.114781e-7,0.000019442383,0.000015115482,0.0003990803],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.997441,0.0007775504,0.0013787582,0.00017217167,0.00007999168,0.00015055652],"domain_scores_gemma":[0.9978908,0.0005695635,0.0009426549,0.00016940603,0.00033144787,0.000096136246],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011370451,0.00013925687,0.0004625536,0.00007471731,0.00012524558,0.000035303437,0.00016260931,0.00029044153,0.0006133503],"category_scores_gemma":[0.00091154396,0.00011947283,0.00013894688,0.00015406498,0.00031397282,0.00033002777,0.000045906454,0.0008899057,0.00018238222],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00075730216,0.00013661236,0.010965647,0.000040673,0.0002009564,0.000009159198,0.0008418578,0.000047388243,0.9363498,0.0002804312,0.04475574,0.0056144],"study_design_scores_gemma":[0.004556854,0.003894234,0.2963344,0.00030837892,0.00020309402,0.00024875702,0.00058676006,0.0011634631,0.32471263,0.0011341706,0.36635378,0.0005035016],"about_ca_topic_score_codex":0.000011514827,"about_ca_topic_score_gemma":6.643943e-7,"teacher_disagreement_score":0.6116372,"about_ca_system_score_codex":0.000022378123,"about_ca_system_score_gemma":0.00013094979,"threshold_uncertainty_score":0.67157555},"labels":[],"label_agreement":null},{"id":"W3010473572","doi":"10.1172/jci130426","title":"IRF4 instructs effector Treg differentiation and immune suppression in human cancer","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":203,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Health and Medical Research Council; Medical Research Council; Bristol-Myers Squibb Canada; Associazione Italiana per la Ricerca sul Cancro; Fondazione Umberto Veronesi; University of Melbourne; Biotechnology and Biological Sciences Research Council; Ministero della Salute; Bristol-Myers Squibb; Deutsche Forschungsgemeinschaft; Cancer Research UK","keywords":"IRF4; Biology; Effector; Cancer research; Immunosuppression; Immune system; Immunology; Transcription factor; Tumor microenvironment; Gene; Genetics","score_opus":0.05644923121328204,"score_gpt":0.3473673667599879,"score_spread":0.29091813554670587,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3010473572","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939584,0.0008344588,0.00007186019,0.002097888,0.0028590227,0.00009347416,0.0000010827347,0.000010344095,0.00007343482],"genre_scores_gemma":[0.99877095,0.00021597266,0.000038767183,0.000557158,0.00019298273,0.0000024100964,0.000030280897,0.0000075804383,0.00018387275],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9981791,0.00046944382,0.0010798258,0.00012670323,0.00004894972,0.00009600717],"domain_scores_gemma":[0.9987912,0.00021299915,0.00078083185,0.000060055158,0.00010702264,0.0000478987],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000466422,0.00009355314,0.00034792654,0.00008876328,0.00006386975,0.000017609766,0.00007410089,0.00021095747,0.00032638022],"category_scores_gemma":[0.0007886955,0.00007416631,0.000097105454,0.00010372697,0.000107541615,0.00030660175,0.000027525577,0.000607761,0.00001987553],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041119003,0.000056810313,0.09982585,0.000028754475,0.000055207573,0.0000016810653,0.0004035779,0.00001553373,0.8873094,0.000104147555,0.0027303759,0.0090575125],"study_design_scores_gemma":[0.003654652,0.0007004085,0.7812521,0.00022809021,0.000056401557,0.000014868532,0.00009924552,0.0001769941,0.20902945,0.00026441665,0.0044199275,0.0001034379],"about_ca_topic_score_codex":0.00004202923,"about_ca_topic_score_gemma":0.000008905031,"teacher_disagreement_score":0.6814263,"about_ca_system_score_codex":0.000025380261,"about_ca_system_score_gemma":0.000046356465,"threshold_uncertainty_score":0.35736346},"labels":[],"label_agreement":null},{"id":"W3010667353","doi":"10.1172/jci125898","title":"Neogenin neutralization prevents photoreceptor loss in inherited retinal degeneration","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Retinal Development and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; University of Toronto; Krembil Foundation","funders":"National Institutes of Health; Krembil Foundation; University of Toronto; Foundation Fighting Blindness; Fondation Brain Canada; Research to Prevent Blindness; Cleveland Clinic Foundation; National Eye Institute; Cleveland Clinic","keywords":"Retinal degeneration; Degeneration (medical); Neutralization; Retinal; Retina; Biology; Cell biology; Ophthalmology; Anatomy; Chemistry; Neuroscience; Medicine; Genetics; Antibody","score_opus":0.057062146465381124,"score_gpt":0.34039403007917235,"score_spread":0.28333188361379125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3010667353","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99592704,0.000121560995,0.0018232882,0.001708083,0.0002305582,0.00010468197,0.0000010767407,0.000003243648,0.000080477315],"genre_scores_gemma":[0.9942762,0.00032131423,0.0032344018,0.0014873488,0.00054811354,0.0000023079572,0.0000834567,0.00001028198,0.000036531317],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99838066,0.0002369743,0.0009581225,0.00015069843,0.00017939493,0.00009413813],"domain_scores_gemma":[0.99910563,0.000022172257,0.0005121178,0.000056875917,0.00014957204,0.00015363668],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00064294686,0.000087573266,0.00017914789,0.00003856535,0.000022364427,0.000019979141,0.00011177172,0.00015370172,0.000022561548],"category_scores_gemma":[0.0010807902,0.00008155537,0.000099014534,0.0001673625,0.00006356529,0.000019866238,0.000022512797,0.0001561083,0.0000044503345],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00061433803,0.00006733515,0.73641425,0.000019980838,0.00002625765,0.000006445279,0.00019089664,0.00076306425,0.2552224,0.000048879672,0.0044611297,0.0021650118],"study_design_scores_gemma":[0.003913619,0.0018597164,0.6917566,0.00012370588,0.000037119637,0.00002147912,0.00010408896,0.0027262932,0.2797638,0.00088034535,0.018458541,0.00035470913],"about_ca_topic_score_codex":0.000002556206,"about_ca_topic_score_gemma":0.0000069445236,"teacher_disagreement_score":0.044657644,"about_ca_system_score_codex":0.000009163921,"about_ca_system_score_gemma":0.0001805624,"threshold_uncertainty_score":0.33257318},"labels":[],"label_agreement":null},{"id":"W3010937093","doi":"10.1172/jci134395","title":"Neutralizing antibody VRC01 failed to select for HIV-1 mutations upon viral rebound","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Chulalongkorn University; Henry M. Jackson Foundation; U.S. Department of Health and Human Services; U.S. Department of Defense","keywords":"Viremia; Neutralization; Virology; Antibody; Neutralizing antibody; Medicine; Immunology; Human immunodeficiency virus (HIV)","score_opus":0.11121611236104367,"score_gpt":0.42252946247779116,"score_spread":0.3113133501167475,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3010937093","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9667056,0.00016779482,0.0058795465,0.026347252,0.00038702527,0.00035366882,0.00005333396,0.000019044017,0.00008673786],"genre_scores_gemma":[0.9937957,0.000033154985,0.003922913,0.0014753358,0.0003343486,0.000009757317,0.00024015218,0.000012023624,0.00017659797],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981911,0.00036365067,0.0009702044,0.00017178974,0.0000715267,0.00023170341],"domain_scores_gemma":[0.9982178,0.00079771416,0.00039336554,0.0000851307,0.0002961496,0.00020981753],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00087418174,0.00010388658,0.00037162958,0.0000835242,0.00014112757,0.00003696318,0.00015510405,0.00015576204,0.000081639024],"category_scores_gemma":[0.003112437,0.0000823292,0.00022375412,0.00016403396,0.00011083108,0.00018647569,0.000023619858,0.00038719646,0.00041633827],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0035337324,0.0005222809,0.10665948,0.000082860446,0.0013398966,0.000059900718,0.0025733924,0.0007008735,0.7748829,0.0027592864,0.09235336,0.014532037],"study_design_scores_gemma":[0.02608895,0.022759456,0.2879292,0.000417436,0.0008343848,0.00015303568,0.0008266539,0.0009780439,0.26170537,0.007829155,0.38966867,0.00080967165],"about_ca_topic_score_codex":0.0000072839644,"about_ca_topic_score_gemma":0.0000084731055,"teacher_disagreement_score":0.5131775,"about_ca_system_score_codex":0.000029655586,"about_ca_system_score_gemma":0.0002997297,"threshold_uncertainty_score":0.5351325},"labels":[],"label_agreement":null},{"id":"W3011150630","doi":"10.1172/jci99027","title":"Atypical cadherin FAT4 orchestrates lymphatic endothelial cell polarity in response to flow","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Lymphatic System and Diseases","field":"Medicine","cited_by":61,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; University of Toronto; Mount Sinai Hospital","funders":"Australian Research Council; South Australian Health and Medical Research Institute; National Health and Medical Research Council; Hospital Research Foundation","keywords":"Lymphangiogenesis; Cell biology; Biology; Lymphatic system; Cadherin; Lymphatic Endothelium; Morphogenesis; Cell polarity; Cancer research; Genetics; Immunology; Gene; Cell","score_opus":0.1171577840787237,"score_gpt":0.3833769492531584,"score_spread":0.2662191651744347,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3011150630","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98330253,0.00013829696,0.0004337761,0.015456559,0.00025637532,0.00025129796,0.000007072393,0.000015253123,0.00013881589],"genre_scores_gemma":[0.98729384,0.000014509043,0.0054243305,0.006361203,0.00081134756,0.000003095637,0.0000034260768,0.000014550922,0.00007370784],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9967099,0.0007628637,0.0017251932,0.00016382769,0.00046744404,0.00017077368],"domain_scores_gemma":[0.9967338,0.0013426803,0.000455144,0.00013986725,0.00020223513,0.0011262967],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0020685808,0.00013007244,0.0006335611,0.0001009899,0.00002346282,0.000031812597,0.00012828429,0.00015932121,0.000074082236],"category_scores_gemma":[0.014311146,0.0001010262,0.00022865713,0.00029862192,0.000099494144,0.0001594351,0.000028004322,0.00012029314,0.00010344314],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.02466333,0.0006485005,0.8733213,0.00032300994,0.00006581142,0.000494367,0.0018844348,0.00026962932,0.09187816,0.000061253144,0.0025975315,0.0037926547],"study_design_scores_gemma":[0.008161108,0.0025116112,0.9753769,0.0005114691,0.00015745984,0.00008682237,0.00043601496,0.003301537,0.007576641,0.00069119915,0.0010281791,0.00016104968],"about_ca_topic_score_codex":0.000014021623,"about_ca_topic_score_gemma":0.0000034168734,"teacher_disagreement_score":0.102055594,"about_ca_system_score_codex":0.00008479522,"about_ca_system_score_gemma":0.0012782121,"threshold_uncertainty_score":0.99399173},"labels":[],"label_agreement":null},{"id":"W3011416804","doi":"10.1172/jci128994","title":"Norrin mediates tumor-promoting and -suppressive effects in glioblastoma via Notch and Wnt","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Wnt/β-catenin signaling in development and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Princess Margaret Cancer Centre; Hospital for Sick Children; University of Toronto; University Health Network","funders":"Canadian Institutes of Health Research; Hospital for Sick Children; Cancer Research Society; Genome Canada","keywords":"Wnt signaling pathway; Carcinogenesis; Notch signaling pathway; Cancer research; Cancer stem cell; Biology; Stem cell; Signal transduction; Cancer; Cell biology; Genetics","score_opus":0.022860467830436104,"score_gpt":0.30345965150840903,"score_spread":0.28059918367797293,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3011416804","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973841,0.00068090146,0.00029024054,0.0013969144,0.0001588526,0.000075170276,5.381944e-7,0.0000026438129,0.000010642499],"genre_scores_gemma":[0.9965138,0.0001407103,0.0015897122,0.0012017892,0.00053481606,0.0000025308586,0.0000025107329,0.00000888883,0.0000052767155],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988647,0.00013241578,0.0006066179,0.00016632138,0.00013025614,0.00009965643],"domain_scores_gemma":[0.9991244,0.00014867414,0.0004003965,0.000040495615,0.00009295869,0.00019307838],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006335038,0.00009096291,0.00023047236,0.000028870882,0.00002480762,0.000021819535,0.000078310615,0.00010473148,0.0000034803327],"category_scores_gemma":[0.001613442,0.00007617854,0.000044093857,0.00006966424,0.00015435509,0.000013441505,0.00006393741,0.00021291773,0.0000010238703],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030918914,0.000025745323,0.32867694,0.000116405325,0.00005664167,0.000041010095,0.00062831613,0.000056378387,0.66244483,0.000015516564,0.0006391928,0.0069898404],"study_design_scores_gemma":[0.0024580585,0.0016737432,0.15663122,0.00027370275,0.000046964167,0.000052488936,0.00007366755,0.0019016198,0.83440083,0.0018197405,0.0004506782,0.00021727307],"about_ca_topic_score_codex":0.0000018829704,"about_ca_topic_score_gemma":0.0000042319716,"teacher_disagreement_score":0.17204571,"about_ca_system_score_codex":0.000004909849,"about_ca_system_score_gemma":0.00008325628,"threshold_uncertainty_score":0.31064707},"labels":[],"label_agreement":null},{"id":"W3012092751","doi":"10.1172/jci127750","title":"Claudin-2 deficiency associates with hypercalciuria in mice and human kidney stone disease","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Kidney Stones and Urolithiasis Treatments","field":"Medicine","cited_by":109,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Common Fund; National Institute on Drug Abuse; National Institute of Neurological Disorders and Stroke; National Institute of General Medical Sciences; National Institute of Mental Health; National Heart, Lung, and Blood Institute; National Human Genome Research Institute; National Institute of Diabetes and Digestive and Kidney Diseases; University of Tokyo; Royan Institute; Natural Sciences and Engineering Research Council of Canada; National Cancer Institute; National Institutes of Health; University of Alberta","keywords":"Hypercalciuria; Reabsorption; Endocrinology; Claudin; Nephrocalcinosis; Internal medicine; Paracellular transport; Kidney stones; Kidney; Kidney disease; Calcium; Medicine; Biology; Tight junction; Cell biology; Permeability (electromagnetism)","score_opus":0.08169439349268456,"score_gpt":0.37744728199958955,"score_spread":0.29575288850690495,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3012092751","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9661311,0.0002211942,0.00001672597,0.033256628,0.00006444435,0.0001372388,0.000005304238,0.000008962852,0.00015840855],"genre_scores_gemma":[0.98901474,0.000086297994,0.0014537041,0.009097799,0.0002745904,0.0000015749571,0.000010872574,0.0000125888555,0.000047828256],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99833417,0.00013576084,0.00090572116,0.00017194367,0.00032174852,0.00013063835],"domain_scores_gemma":[0.99774,0.00017291542,0.0005409485,0.000072404604,0.00015653277,0.0013172152],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000606845,0.000112080495,0.00046913954,0.00006337488,0.000045913042,0.000020002764,0.000056650973,0.00008808168,0.00001637413],"category_scores_gemma":[0.0032964319,0.000076217555,0.00009951848,0.00018577489,0.00016747344,0.00016667246,0.000018980822,0.00038700143,0.000004864431],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005057759,0.00026417256,0.9960854,0.000053399977,0.000054196542,0.00010056811,0.00020962156,0.0000045829906,0.0010842851,0.00021050562,0.0010352288,0.00039224708],"study_design_scores_gemma":[0.004758394,0.0015263255,0.99123514,0.00028309147,0.00032769298,0.000027563612,0.00006673653,0.0001964518,0.00017422548,0.00077247643,0.00055162486,0.00008027335],"about_ca_topic_score_codex":0.000017124172,"about_ca_topic_score_gemma":0.0000018566767,"teacher_disagreement_score":0.02415883,"about_ca_system_score_codex":0.000036197358,"about_ca_system_score_gemma":0.00039176247,"threshold_uncertainty_score":0.3946375},"labels":[],"label_agreement":null},{"id":"W3012442502","doi":"10.1172/jci126567","title":"TYK2 inhibition reduces type 3 immunity and modifies disease progression in murine spondyloarthritis","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Psoriasis: Treatment and Pathogenesis","field":"Immunology and Microbiology","cited_by":73,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Western Hospital; Krembil Foundation; University of Toronto; University Health Network","funders":"Canadian Institutes of Health Research; Austrian Science Fund; Brigham and Women's Hospital","keywords":"Tyrosine kinase 2; Medicine; Immunology; Immunity; Immune system; Janus kinase; Disease; Ankylosing spondylitis; Biology; Receptor; Cytokine; Internal medicine","score_opus":0.08768227452592112,"score_gpt":0.34968374972924166,"score_spread":0.2620014752033205,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3012442502","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99235225,0.0038089124,0.0000055459254,0.0031594108,0.0005220586,0.00009868673,0.000007727854,0.000010906676,0.000034524437],"genre_scores_gemma":[0.9979407,0.0012101273,0.0002835276,0.00026568063,0.00021244808,0.0000022512477,0.000050437764,0.000005866861,0.000028966493],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99853957,0.00048722886,0.00071171764,0.000118227086,0.00004849533,0.00009473773],"domain_scores_gemma":[0.99909633,0.00022614436,0.00040974846,0.000060777056,0.00010827209,0.000098734985],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006104446,0.00008922039,0.00028183762,0.00006484525,0.0000570605,0.000013879051,0.00005415859,0.00013809737,0.00004500533],"category_scores_gemma":[0.0013819527,0.00007013628,0.00007263698,0.00013889969,0.00020390174,0.00021955118,0.000031479587,0.0002914886,0.000019670617],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007545066,0.00065421144,0.47239217,0.000110062494,0.00022023551,0.00017260156,0.0019544533,0.000039755476,0.21126097,0.00038056303,0.0028869216,0.30238298],"study_design_scores_gemma":[0.0058857757,0.0018300547,0.9315164,0.0005996376,0.00016742028,0.000048418042,0.0002455895,0.000057483678,0.05365342,0.0033778795,0.0024226983,0.00019523941],"about_ca_topic_score_codex":0.0000049417413,"about_ca_topic_score_gemma":0.000003536554,"teacher_disagreement_score":0.4591242,"about_ca_system_score_codex":0.000009842996,"about_ca_system_score_gemma":0.000106964355,"threshold_uncertainty_score":0.28600746},"labels":[],"label_agreement":null},{"id":"W3012764207","doi":"10.1172/jci132139","title":"Fetal alcohol spectrum disorder predisposes to metabolic abnormalities in adulthood","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Birth, Development, and Health","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute on Alcohol Abuse and Alcoholism; Harvard Stem Cell Institute; Pew Charitable Trusts; American Liver Foundation; National Institutes of Health; Canadian Institutes of Health Research; Harvard Medical School; U.S. Department of Veterans Affairs","keywords":"Physiology; Medicine; Fetus; Population; Internal medicine; Obesity; Disease; Cohort; Zebrafish; Endocrinology; Adipose tissue; Biology; Bioinformatics; Pregnancy; Genetics; Environmental health","score_opus":0.09837560955142646,"score_gpt":0.38975481006903206,"score_spread":0.2913792005176056,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3012764207","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9285534,0.0003847115,0.0003475027,0.069537476,0.00039962694,0.00025552665,0.0000037643322,0.000016412954,0.00050155853],"genre_scores_gemma":[0.967167,0.0063454853,0.0069333483,0.01806158,0.0014446522,0.000003654678,0.000007190462,0.000015899075,0.000021177912],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99717754,0.00019116922,0.0018109865,0.00017098285,0.00042942128,0.00021990208],"domain_scores_gemma":[0.99820966,0.00017736106,0.0005470155,0.000098437915,0.00016254629,0.00080499816],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013585595,0.00012532083,0.0006801795,0.00014119683,0.000036570982,0.000021091655,0.00010918744,0.00013131864,0.00006986356],"category_scores_gemma":[0.0027122297,0.000097993936,0.00016409716,0.000346079,0.00008590971,0.00024237596,0.000030570078,0.0006281336,0.000037933863],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006931586,0.00018503622,0.9790464,0.0001662563,0.00008110765,0.000050061048,0.003173826,0.00004083013,0.00025312076,0.0088292705,0.002603158,0.0048777796],"study_design_scores_gemma":[0.0030751834,0.0011382359,0.9799607,0.00026403405,0.000077139,0.000044720793,0.00063567853,0.00028271214,0.00081228034,0.009406636,0.0041894615,0.00011324742],"about_ca_topic_score_codex":0.00002798793,"about_ca_topic_score_gemma":0.00006055542,"teacher_disagreement_score":0.051475894,"about_ca_system_score_codex":0.000028003325,"about_ca_system_score_gemma":0.0007781819,"threshold_uncertainty_score":0.39960766},"labels":[],"label_agreement":null},{"id":"W3016056304","doi":"10.1172/jci136162","title":"(H)Elping nerve growth factor: Elp1 inhibits TrkA’s phosphatase to maintain retrograde signaling","year":2020,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Hereditary Neurological Disorders","field":"Neuroscience","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"","keywords":"Nerve growth factor; Tropomyosin receptor kinase A; Cell biology; Neuroscience; Neurotrophin; Biology; Low-affinity nerve growth factor receptor; Signal transduction; Receptor; Genetics","score_opus":0.17430240895444746,"score_gpt":0.36131712887805945,"score_spread":0.187014719923612,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3016056304","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2393578,0.000089466914,0.00066663884,0.75668085,0.002379866,0.00051166106,0.00012942615,0.00010135458,0.000082948005],"genre_scores_gemma":[0.23039319,0.0000881092,0.0017813193,0.7598012,0.0077653937,0.000007170443,0.000046636647,0.00008719088,0.000029806833],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9898786,0.0026210945,0.0039727218,0.0010171976,0.00179136,0.00071903685],"domain_scores_gemma":[0.9902404,0.005087249,0.0029328074,0.0003781717,0.0003014332,0.0010599616],"candidate_categories":["metaresearch","metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0014383645,0.0005928897,0.0014714648,0.00033669148,0.00017177354,0.00024693325,0.0012143509,0.0011216463,0.00016111216],"category_scores_gemma":[0.052589126,0.00050460454,0.0009207842,0.000897362,0.00049666443,0.00066316733,0.00023509911,0.007889066,0.0002033858],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026635407,0.00010526312,0.0017651009,0.00018004749,0.000057653167,0.005936744,0.00017178847,0.00020514602,0.0140757505,0.00029424307,0.97525966,0.0016822749],"study_design_scores_gemma":[0.0056933425,0.013526904,0.0041023735,0.0022760842,0.0006797299,0.0006340014,0.000109196866,0.0017895554,0.26161936,0.10460502,0.6016093,0.0033551485],"about_ca_topic_score_codex":0.000013458029,"about_ca_topic_score_gemma":0.0000013084009,"teacher_disagreement_score":0.37365034,"about_ca_system_score_codex":0.00011307756,"about_ca_system_score_gemma":0.000517498,"threshold_uncertainty_score":0.99974054},"labels":[],"label_agreement":null},{"id":"W3016087872","doi":"10.1172/jci131241","title":"The neonatal microenvironment programs innate γδ T cells through the transcription factor STAT5","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"The Wilson Centre","funders":"Natural Sciences and Engineering Research Council of Canada; National Institute of Arthritis and Musculoskeletal and Skin Diseases; LEO Fondet; LEO Pharma Research Foundation; Danmarks Tekniske Universitet; University of Toronto; National Institutes of Health; H. Lundbeck A/S; Lundbeckfonden; Austrian Science Fund","keywords":"Biology; Autoimmunity; Immunology; Innate immune system; Immune system; Experimental autoimmune encephalomyelitis; RAR-related orphan receptor gamma; Inflammation; Cell biology; Cancer research; FOXP3","score_opus":0.0784254629536327,"score_gpt":0.3101577636133956,"score_spread":0.23173230065976289,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3016087872","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9564241,0.0018104647,0.0030168719,0.030436192,0.007860615,0.00031540688,0.0000035946375,0.000023020528,0.00010969252],"genre_scores_gemma":[0.9931655,0.001145239,0.00015950346,0.004113598,0.0003221728,0.00000455795,0.00002556153,0.000012411206,0.0010514536],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99773383,0.000656123,0.001212359,0.00013501513,0.00009730636,0.00016538578],"domain_scores_gemma":[0.99842703,0.00039250025,0.00089069986,0.00013234127,0.00011271507,0.0000447399],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006829779,0.00012142837,0.00022818736,0.000014454631,0.00026958648,0.000058177233,0.00024261887,0.00016407513,0.00020040738],"category_scores_gemma":[0.00031214548,0.00006387786,0.0002725163,0.00008923299,0.00045765,0.00032493236,0.000024885627,0.0009612772,0.00025611333],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015524442,0.00016494116,0.001996485,0.000019186034,0.00045083542,0.0000045616935,0.006589787,0.00009448572,0.8475435,0.00042944928,0.051424563,0.089729786],"study_design_scores_gemma":[0.001217259,0.0010643011,0.005677518,0.000032010837,0.00007272565,0.000033269986,0.0013261535,0.000063244996,0.1371516,0.00038576397,0.85288477,0.00009140881],"about_ca_topic_score_codex":0.000010515463,"about_ca_topic_score_gemma":0.0000033340789,"teacher_disagreement_score":0.8014602,"about_ca_system_score_codex":0.000030272404,"about_ca_system_score_gemma":0.00006963364,"threshold_uncertainty_score":0.41763246},"labels":[],"label_agreement":null},{"id":"W3019093282","doi":"10.1172/jci139562","title":"Panic prescribing has become omnipresent during the COVID-19 pandemic","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; Lunenfeld-Tanenbaum Research Institute","funders":"School of Medicine, New York University","keywords":"Pandemic; Coronavirus disease 2019 (COVID-19); Panic; 2019-20 coronavirus outbreak; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Betacoronavirus; Coronavirus Infections; Medicine; Virology; Outbreak; Psychiatry; Pathology; Anxiety; Infectious disease (medical specialty); Disease","score_opus":0.42990160617605894,"score_gpt":0.4714331013280518,"score_spread":0.04153149515199284,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3019093282","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9067363,0.00019235183,0.0008400397,0.09159823,0.0002370071,0.00021266169,0.0000022158424,0.000027104441,0.00015404547],"genre_scores_gemma":[0.98856115,0.0002664607,0.000328538,0.008800631,0.0018438549,0.0000032764099,0.0000030539193,0.000013141531,0.00017991889],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974949,0.0003995934,0.0012425573,0.00015329984,0.0005303865,0.00017925783],"domain_scores_gemma":[0.9973592,0.00077193475,0.0005289768,0.00015303674,0.00025547692,0.00093133847],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.002252145,0.000096097196,0.00038044315,0.00007417528,0.00021819548,0.00007681516,0.00015455567,0.00012261212,0.00017650519],"category_scores_gemma":[0.009912878,0.000057515324,0.000312207,0.00029587187,0.0003240099,0.00021659132,0.0000756613,0.0011496653,0.000028853265],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00050588173,0.00007226401,0.97304374,0.0001505035,0.00016043999,0.00008237541,0.00058903097,0.0005017243,0.013318959,0.00008799604,0.009320197,0.0021669038],"study_design_scores_gemma":[0.008663774,0.0028977697,0.8342431,0.00027210897,0.0004079762,0.0015720214,0.0005653207,0.013254079,0.0032034246,0.0026862696,0.13195375,0.0002804026],"about_ca_topic_score_codex":0.000045945366,"about_ca_topic_score_gemma":0.000015090433,"teacher_disagreement_score":0.13880062,"about_ca_system_score_codex":0.000098428856,"about_ca_system_score_gemma":0.00072247506,"threshold_uncertainty_score":0.99842703},"labels":[],"label_agreement":null},{"id":"W3020230577","doi":"10.1172/jci134260","title":"The landscape of RNA polymerase II–associated chromatin interactions in prostate cancer","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vector Institute; University of Toronto; Ontario Institute for Cancer Research; Institute of Cancer Research","funders":"National Cancer Institute; Canadian Institutes of Health Research; Genentech; Astellas Pharma; Academy of Medical Sciences; National Institute for Health and Care Research; Royal Marsden NHS Foundation Trust; Medical Research Council; Cancer Prevention and Research Institute of Texas; Daiichi Sankyo Europe; U.S. Department of Defense; Sanofi; Menarini Silicon Biosystems; National Institutes of Health; Vertex Pharmaceuticals","keywords":"Chromatin; Cancer; Prostate cancer; RNA polymerase; Polymerase; Biology; Prostate; Computational biology; Cancer research; RNA; Genetics; DNA; Gene","score_opus":0.03394731355091934,"score_gpt":0.3389273109901893,"score_spread":0.30497999743926996,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3020230577","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994104,0.00036958774,0.000025950058,0.005137042,0.00021357162,0.00006358579,0.000011466602,0.0000013642915,0.00007341285],"genre_scores_gemma":[0.9982978,0.0006546251,0.0002468427,0.00050286815,0.00022743462,0.0000022945355,0.000014566431,0.0000074090817,0.000046131925],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99868864,0.00012433802,0.0009178558,0.00008236061,0.00010543827,0.00008136173],"domain_scores_gemma":[0.9986687,0.000083782455,0.00092739414,0.00007635896,0.00015185495,0.00009192562],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00056073786,0.00006157282,0.00017819896,0.000018280796,0.000048796865,0.00001340114,0.000130159,0.000051513474,0.0000100518155],"category_scores_gemma":[0.0012034575,0.000044256492,0.00010821244,0.00010015237,0.00008176127,0.000006996725,0.00004502047,0.00019816488,5.246107e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045558898,0.00022009078,0.23941568,0.000038301045,0.00027107052,0.00000645491,0.0008915142,0.0033432313,0.7365352,0.00010694261,0.009578547,0.009137377],"study_design_scores_gemma":[0.008978235,0.0052636974,0.60086155,0.0006209934,0.0002477545,0.0000302613,0.002018038,0.07634122,0.29235402,0.003144212,0.0095144985,0.00062554976],"about_ca_topic_score_codex":0.000016385471,"about_ca_topic_score_gemma":0.000117696305,"teacher_disagreement_score":0.44418117,"about_ca_system_score_codex":0.000009422519,"about_ca_system_score_gemma":0.000217733,"threshold_uncertainty_score":0.18047275},"labels":[],"label_agreement":null},{"id":"W3022842541","doi":"10.1172/jci45627","title":"Disruption of intraflagellar protein transport in photoreceptor cilia causes Leber congenital amaurosis in humans and mice","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Genetic and Kidney Cyst Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":109,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"National Cancer Institute; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; Bundesministerium für Bildung und Forschung; Radboud Universiteit; Eberhard Karls Universität Tübingen; Foundation Fighting Blindness","keywords":"Intraflagellar transport; Cilium; Cell biology; Biology; Retinal degeneration; Motile cilium; Bardet–Biedl syndrome; Opsin; Ciliogenesis; Mutation; Retina; Genetics; Flagellum; Retinal; Neuroscience; Phenotype; Biochemistry; Rhodopsin; Gene","score_opus":0.04728480994124895,"score_gpt":0.30876385108544757,"score_spread":0.2614790411441986,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3022842541","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9993147,0.000255486,0.000065449014,0.00005023631,0.00009044828,0.00015177207,0.000010098269,0.0000011711176,0.000060596125],"genre_scores_gemma":[0.9983207,0.00024783227,0.0011951207,0.00008876323,0.00009321395,0.0000044610533,0.000014579716,0.0000080110385,0.000027313912],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985989,0.0001397167,0.0009117325,0.00013946602,0.000117929085,0.00009230944],"domain_scores_gemma":[0.99928623,0.00002489354,0.00036297517,0.00008226848,0.00010803844,0.00013558085],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005774584,0.00008695496,0.0002341906,0.00006404558,0.000010507128,0.0000039156516,0.00007893447,0.0001529183,0.000018541796],"category_scores_gemma":[0.0005267257,0.00007737574,0.00008692974,0.00006913177,0.0002160681,0.000013023266,0.000012584904,0.00013030486,5.857054e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002924069,0.00015685034,0.50647944,0.000026154677,0.000023394941,0.0000056624745,0.00026065,0.0000054535403,0.49241164,0.000008792217,0.000038572023,0.00029100713],"study_design_scores_gemma":[0.0009957134,0.0005230991,0.70911354,0.00009069336,0.000034557856,0.0000030707129,0.00013251134,0.000012674811,0.28853709,0.00037320325,0.000105233485,0.00007861872],"about_ca_topic_score_codex":0.000058619054,"about_ca_topic_score_gemma":0.0002297352,"teacher_disagreement_score":0.20387454,"about_ca_system_score_codex":0.0000062290865,"about_ca_system_score_gemma":0.0001493763,"threshold_uncertainty_score":0.31552914},"labels":[],"label_agreement":null},{"id":"W3025806951","doi":"10.1172/jci132765","title":"Nonalcoholic fatty liver disease in CLOCK mutant mice","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Liver Disease Diagnosis and Treatment","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; NIH Office of the Director; National Heart, Lung, and Blood Institute; National Institutes of Health; School of Medicine, New York University; York University; American Heart Association; U.S. Department of Veterans Affairs","keywords":"Nonalcoholic fatty liver disease; Steatosis; Biology; Endocrinology; Internal medicine; Fatty liver; CD36; Lipid metabolism; Apolipoprotein E; Medicine; Disease; Receptor","score_opus":0.1356310184337244,"score_gpt":0.38460247156713373,"score_spread":0.24897145313340932,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3025806951","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9769806,0.00068788126,0.000028852053,0.021872235,0.0001460405,0.00019343111,0.000007640329,0.000008027327,0.00007526407],"genre_scores_gemma":[0.9883623,0.0006660973,0.0008136909,0.009474596,0.0006494615,0.0000038333524,0.000011177117,0.000010190787,0.000008658017],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981603,0.00014947302,0.0010612207,0.00015749762,0.00035914878,0.00011237057],"domain_scores_gemma":[0.9978888,0.0003169786,0.0004530729,0.00009476595,0.00018196576,0.0010644244],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039932062,0.00010147493,0.0004135969,0.000057267727,0.000018610044,0.000015463735,0.00007297038,0.00006750899,0.0000813817],"category_scores_gemma":[0.0017222537,0.00007472809,0.00029428842,0.00017244452,0.00009051472,0.00015827996,0.000022040522,0.00032930667,0.0000572647],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00072868355,0.0005960745,0.9932882,0.00007102773,0.00010277189,0.00093276665,0.00019549551,0.00006723719,0.00021557946,0.0001892598,0.0011069727,0.002505895],"study_design_scores_gemma":[0.003211104,0.0005694552,0.9910314,0.00029133938,0.00039115758,0.000011171877,0.000019412477,0.0023287083,0.00060772063,0.00048425994,0.000984768,0.00006950339],"about_ca_topic_score_codex":0.000020489484,"about_ca_topic_score_gemma":0.000003859991,"teacher_disagreement_score":0.01239764,"about_ca_system_score_codex":0.00004676722,"about_ca_system_score_gemma":0.0004115871,"threshold_uncertainty_score":0.3047323},"labels":[],"label_agreement":null},{"id":"W3026962176","doi":"10.1172/jci127668","title":"Blocking endothelial apoptosis revascularizes the retina in a model of ischemic retinopathy","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Retinal Diseases and Treatments","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Eye Institute; National Health and Medical Research Council; Australian Research Council; Genentech; National Institutes of Health; Royal Society; Korea Advanced Institute of Science and Technology; British Heart Foundation; University of Toronto; Medical Research Council; Peter MacCallum Cancer Centre; Francis Crick Institute; Australian Government; University of Texas Southwestern Medical Center","keywords":"Retina; Retinal; Hypoxia (environmental); Neovascularization; Ischemia; Retinopathy; Diabetic retinopathy; Apoptosis; Biology; Ophthalmology; Angiogenesis; Medicine; Cancer research; Internal medicine; Chemistry; Endocrinology; Neuroscience; Diabetes mellitus; Biochemistry; Oxygen","score_opus":0.11720518130026093,"score_gpt":0.36678070110631056,"score_spread":0.24957551980604964,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3026962176","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9883808,0.00022200725,0.00019186696,0.010560152,0.00007267113,0.00016711878,0.000004048668,0.0000045563766,0.0003967633],"genre_scores_gemma":[0.9948645,0.0003306379,0.002995352,0.0014563232,0.00031239935,0.000002219686,0.0000029054547,0.000010455682,0.000025208954],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997878,0.00017432398,0.0013270275,0.00012405096,0.0003991563,0.000097413256],"domain_scores_gemma":[0.9982849,0.00027911027,0.0008784375,0.00013453631,0.0002020867,0.00022095232],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009536096,0.00009101284,0.00046931754,0.000052790798,0.000021239099,0.0000089267605,0.00010800627,0.00008809766,0.000011723841],"category_scores_gemma":[0.0039096256,0.000055057146,0.0003779161,0.0002101394,0.00014679061,0.000079782716,0.000026570757,0.00039722386,0.0000027921085],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0040551024,0.0005639286,0.8909632,0.0003885175,0.0003977251,0.00006675853,0.0014168747,0.0018615642,0.09185648,0.00041268195,0.0021166636,0.005900499],"study_design_scores_gemma":[0.029655399,0.008427571,0.48046067,0.0061444393,0.00440708,0.00018074733,0.0009811041,0.2576829,0.19816104,0.011727545,0.0015824139,0.000589091],"about_ca_topic_score_codex":0.000006670465,"about_ca_topic_score_gemma":3.3015013e-7,"teacher_disagreement_score":0.41050255,"about_ca_system_score_codex":0.000019511179,"about_ca_system_score_gemma":0.00024165184,"threshold_uncertainty_score":0.46804693},"labels":[],"label_agreement":null},{"id":"W3033380374","doi":"10.1172/jci134965","title":"PRICKLE3 linked to ATPase biogenesis manifested Leber’s hereditary optic neuropathy","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Key Research and Development Program of China; Zhejiang Provincial Program for the Cultivation of High-Level Innovative Health Talents; Institute of Genetics; National Natural Science Foundation of China; Zhejiang University; Cincinnati Children's Hospital Medical Center","keywords":"Mutation; Mitochondrial DNA; Optic neuropathy; Biology; Mitochondrion; Leber's hereditary optic neuropathy; Genetics; Molecular biology; Mitochondrial biogenesis; Mitochondrial disease; Phenotype; Gene; Optic nerve","score_opus":0.080816431606739,"score_gpt":0.33509887695391605,"score_spread":0.25428244534717703,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3033380374","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9857771,0.00013007743,0.0039121564,0.00808619,0.001790269,0.00014597732,0.000007820646,0.000010759748,0.00013964217],"genre_scores_gemma":[0.95937,0.00011217495,0.0132255815,0.020368868,0.0066500814,0.0000037651648,0.00005105371,0.000029860945,0.00018861434],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.997942,0.00039401124,0.0010787098,0.00025653772,0.00019139041,0.00013740626],"domain_scores_gemma":[0.9983808,0.000089648835,0.0004940996,0.00017445866,0.0002862728,0.0005747497],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00062297843,0.0001280399,0.00030393113,0.00005180651,0.00004169565,0.000020417432,0.0001991373,0.0002284823,0.000047234375],"category_scores_gemma":[0.0038583835,0.000111974245,0.00023238259,0.00017957883,0.00007799256,0.000010445045,0.000066748486,0.00025142723,0.00007676524],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012382738,0.00011662278,0.023182396,0.00003259125,0.000097374206,0.00025291546,0.00014145496,0.00064163073,0.91613543,0.00008731507,0.054393556,0.003680457],"study_design_scores_gemma":[0.010986589,0.03113889,0.30515847,0.00021816666,0.0007164329,0.0018602689,0.0003951399,0.0023637905,0.21471463,0.0010633662,0.42979592,0.001588331],"about_ca_topic_score_codex":0.0000029477392,"about_ca_topic_score_gemma":0.0000032740081,"teacher_disagreement_score":0.7014208,"about_ca_system_score_codex":0.0000061071673,"about_ca_system_score_gemma":0.00018852513,"threshold_uncertainty_score":0.4619124},"labels":[],"label_agreement":null},{"id":"W3033796830","doi":"10.1172/jci140530","title":"Is innate immunity our best weapon for flattening the curve?","year":2020,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Immune responses and vaccinations","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Institute of Infection and Immunity; Ottawa Hospital","funders":"Canadian Institutes of Health Research; Terry Fox Foundation; University of Ottawa","keywords":"Innate immune system; Pandemic; Immunology; Immunity; Virology; Virus; Battle; Death toll; Biology; Disease; Coronavirus disease 2019 (COVID-19); Immune system; Medicine; Environmental health; Geography; Infectious disease (medical specialty)","score_opus":0.23786809131857245,"score_gpt":0.46412660741812733,"score_spread":0.22625851609955488,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3033796830","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00046507976,0.9891721,0.0002793801,0.006490645,0.0029030142,0.0005733581,0.000064792395,0.000012910142,0.00003870757],"genre_scores_gemma":[0.0005508853,0.99654037,0.0002974475,0.000582799,0.0006866188,0.000023236202,0.00010747325,0.000039911654,0.0011712326],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9941691,0.002208483,0.003087615,0.00021340369,0.000081281134,0.0002400948],"domain_scores_gemma":[0.99189955,0.0033674855,0.0038934809,0.00032640283,0.0004482654,0.000064840024],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.004030106,0.00030306412,0.0019207489,0.0001619682,0.0003502943,0.000057187095,0.00069714314,0.0008013575,0.000046494806],"category_scores_gemma":[0.006578511,0.00018169484,0.0016957041,0.0003085067,0.00013488925,0.00017204692,0.00012052224,0.0023765182,0.00020552939],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014310861,0.00008591859,0.000051598574,0.0009402617,0.0011604633,0.0000038022174,0.00022508911,8.423999e-7,0.00005026304,0.00035755886,0.026096053,0.97088504],"study_design_scores_gemma":[0.0008484653,0.0005752505,0.0001582423,0.0033813973,0.0015611618,0.00017995172,0.00012174579,0.000008233007,0.000051137657,0.000529266,0.99240404,0.0001810922],"about_ca_topic_score_codex":0.0000125128645,"about_ca_topic_score_gemma":0.0000023683142,"teacher_disagreement_score":0.97070396,"about_ca_system_score_codex":0.0000528635,"about_ca_system_score_gemma":0.0010681911,"threshold_uncertainty_score":0.999925},"labels":[],"label_agreement":null},{"id":"W3034286795","doi":"10.1172/jci140200","title":"Early safety indicators of COVID-19 convalescent plasma in 5000 patients","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"COVID-19 Clinical Research Studies","field":"Medicine","cited_by":485,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Center for Advancing Translational Sciences; National Institute of Allergy and Infectious Diseases; Mayo Clinic; Natural Sciences and Engineering Research Council of Canada; Biomedical Advanced Research and Development Authority; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; Takeda Oncology; U.S. Department of Health and Human Services","keywords":"Convalescent plasma; Coronavirus disease 2019 (COVID-19); 2019-20 coronavirus outbreak; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Virology; Medicine; Coronavirus Infections; Internal medicine; Outbreak; Disease","score_opus":0.14357194647938826,"score_gpt":0.4666201806068777,"score_spread":0.32304823412748945,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3034286795","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9562044,0.000039530307,0.00022253612,0.042846713,0.00019911195,0.00037467043,0.0000133398435,0.000010912254,0.00008879449],"genre_scores_gemma":[0.9869384,0.0005156297,0.00074326195,0.01141872,0.00033871902,0.0000022891866,0.000007490366,0.000014087891,0.000021411071],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99425685,0.0005856263,0.0035254927,0.00025165363,0.0011574607,0.00022292494],"domain_scores_gemma":[0.98243606,0.012105013,0.0023878203,0.00024263702,0.0006815843,0.002146865],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.00373479,0.00014360143,0.001061631,0.00026595098,0.000038065555,0.000009943084,0.00023094038,0.00021617558,0.000081233775],"category_scores_gemma":[0.27101064,0.00011118618,0.00036717908,0.0006849231,0.00069314765,0.00015694601,0.00012387283,0.0011799278,0.000018549492],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00260905,0.0004214021,0.9885498,0.00044758286,0.000117198404,0.000045527977,0.00072660745,0.00014236743,0.00008672546,0.00011510449,0.0013261341,0.0054124803],"study_design_scores_gemma":[0.009030807,0.0034541765,0.97594243,0.00032813984,0.0000989936,7.387281e-7,0.0000637175,0.00055210694,0.0002795895,0.0005739874,0.009582288,0.000093019604],"about_ca_topic_score_codex":0.00003352588,"about_ca_topic_score_gemma":0.000004804643,"teacher_disagreement_score":0.26727584,"about_ca_system_score_codex":0.00019098421,"about_ca_system_score_gemma":0.0021186222,"threshold_uncertainty_score":0.73512995},"labels":[],"label_agreement":null},{"id":"W3034536401","doi":"10.1172/jci138179","title":"Impact of TREM2R47H variant on tau pathology–induced gliosis and neurodegeneration","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Neuroinflammation and Neurodegeneration Mechanisms","field":"Neuroscience","cited_by":278,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier universitaire de Québec; University of Victoria","funders":"National Center for Advancing Translational Sciences; NIH Office of the Director; Genentech; National Cancer Institute; Idorsia Pharmaceuticals; National Center for Research Resources; Georgia Clinical and Translational Science Alliance; National Institute on Aging; Center for Cellular Imaging, Washington University; Hope Center for Neurological Disorders; National Institutes of Health; Alvin J. Siteman Cancer Center; Edward N. and Della L. Thome Memorial Foundation; Charles and Helen Schwab Foundation; Amgen; Children's Discovery Institute; Office of Research Infrastructure Programs, National Institutes of Health; Foundation for Barnes-Jewish Hospital; JPB Foundation","keywords":"Gliosis; Neurodegeneration; Tau pathology; Pathology; Neuroscience; Medicine; Biology; Alzheimer's disease; Disease","score_opus":0.20957113659716828,"score_gpt":0.39105200857708144,"score_spread":0.18148087197991317,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3034536401","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99313295,0.00000497226,0.00096519117,0.0052054008,0.00045842305,0.00014340605,0.00000684728,0.000020780688,0.00006203588],"genre_scores_gemma":[0.9941024,0.000076622935,0.00061314966,0.004743774,0.00043512104,0.0000012661484,0.000001444832,0.000015963677,0.000010215376],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9967678,0.00094051944,0.001479147,0.00028986254,0.00040694734,0.0001157048],"domain_scores_gemma":[0.9972519,0.00067417894,0.0014129456,0.00014571624,0.0001759162,0.00033929673],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0007571127,0.0001448475,0.00039956963,0.0001312079,0.000072558345,0.00004949168,0.00015320593,0.00011501617,0.00003497774],"category_scores_gemma":[0.008562544,0.00011281868,0.00021950081,0.0002978751,0.00010289668,0.00035831318,0.000028481441,0.0004117022,0.000010838719],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002166851,0.00006842729,0.0011672439,0.00000841854,0.0000060307875,0.0000553783,0.00013718294,0.0009303846,0.991583,0.003125902,0.00039673227,0.0023046236],"study_design_scores_gemma":[0.0013047464,0.0044728937,0.028725058,0.00002317953,0.000033050408,0.00012623864,0.000006103028,0.013908852,0.9500652,0.001181565,0.000040938176,0.000112164176],"about_ca_topic_score_codex":0.0000010846288,"about_ca_topic_score_gemma":5.727253e-7,"teacher_disagreement_score":0.04151778,"about_ca_system_score_codex":0.000011497194,"about_ca_system_score_gemma":0.00016721657,"threshold_uncertainty_score":0.99978876},"labels":[],"label_agreement":null},{"id":"W3034909353","doi":"10.1172/jci137040","title":"Tau is not necessary for amyloid-β–induced synaptic and memory impairments","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Alzheimer's disease research and treatments","field":"Medicine","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute on Aging; National Institute of Neurological Disorders and Stroke; Fakulta Životního Prostředí, Česká Zemědělská Univerzita v Praze; Canadian Institutes of Health Research","keywords":"Neuroscience; Amyloid (mycology); Psychology; Cognitive science; Cognitive psychology; Medicine; Pathology","score_opus":0.18047145268090073,"score_gpt":0.4317216981309561,"score_spread":0.25125024545005537,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3034909353","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97268575,0.0006432657,0.00006586389,0.026027402,0.00012182295,0.00038075115,0.000012426901,0.00001083856,0.000051855208],"genre_scores_gemma":[0.9886275,0.00017507205,0.0018450628,0.008630742,0.0006731291,0.0000068689615,0.000012151324,0.000015664931,0.000013808559],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982432,0.00011340609,0.00087939994,0.00017673515,0.00041940558,0.00016785793],"domain_scores_gemma":[0.99754536,0.0004547424,0.00046620698,0.0000994502,0.00029280543,0.00114146],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006673867,0.00011160975,0.00045786978,0.000058071688,0.00005859598,0.000025851403,0.000070381444,0.00011299089,0.000043966225],"category_scores_gemma":[0.0018300053,0.000082354796,0.00023176055,0.00010515376,0.0001309156,0.00022377337,0.000028473321,0.0003068502,0.00001637752],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.017648792,0.0025966784,0.7781326,0.0015193848,0.036210023,0.0014061271,0.0021160715,0.000014809976,0.015182097,0.00016778099,0.06865698,0.076348625],"study_design_scores_gemma":[0.044173546,0.029161004,0.8655071,0.0009901588,0.00613619,0.0003501717,0.0007480743,0.012047952,0.031291135,0.007936914,0.0011294029,0.0005283033],"about_ca_topic_score_codex":0.000004693204,"about_ca_topic_score_gemma":3.1981685e-7,"teacher_disagreement_score":0.087374516,"about_ca_system_score_codex":0.000026203215,"about_ca_system_score_gemma":0.0004661184,"threshold_uncertainty_score":0.3358331},"labels":[],"label_agreement":null},{"id":"W3036458210","doi":"10.1172/jci132513","title":"Trp53 and Rb1 regulate autophagy and ligand-dependent Hedgehog signaling","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Hedgehog Signaling Pathway Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Research Institute in Oncology and Hematology; CancerCare Manitoba","funders":"Cancer Council NSW; Victorian Cancer Agency","keywords":"Smoothened; Cilium; Biology; Cell biology; Hedgehog signaling pathway; Hedgehog; Transmembrane protein; Signal transduction; Cancer research; Ligand (biochemistry); Genetics; Receptor","score_opus":0.08155267301840147,"score_gpt":0.34320489610353916,"score_spread":0.2616522230851377,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3036458210","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940582,0.0019735347,0.00080823654,0.0028568227,0.00018258304,0.0000702763,0.0000026337657,0.000006601456,0.00004113071],"genre_scores_gemma":[0.99442774,0.0005432844,0.0020296292,0.0018757542,0.0010581627,9.273816e-7,0.000003623938,0.000014055631,0.00004684283],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984389,0.00017027494,0.0008687727,0.00022522945,0.00017778011,0.00011904801],"domain_scores_gemma":[0.9988017,0.000115791685,0.0005084666,0.00008470486,0.00017660967,0.00031272703],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010775726,0.00012099022,0.00033327276,0.000028143397,0.00006721844,0.0000453019,0.000091894246,0.0001632073,0.0000024327765],"category_scores_gemma":[0.0019857455,0.00010214484,0.00009449229,0.000057659327,0.00022616316,0.000012421977,0.00008793541,0.00023406082,0.0000017323018],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001837201,0.000027676304,0.02802521,0.000060408864,0.00016419182,0.000024654784,0.00042709347,0.00019632932,0.9637551,0.000091142574,0.0009132326,0.0061312886],"study_design_scores_gemma":[0.003486125,0.0031260329,0.05304801,0.00020436443,0.00022266257,0.00013501814,0.00031208544,0.0018715467,0.9268691,0.002687826,0.007653611,0.00038363764],"about_ca_topic_score_codex":0.0000017164525,"about_ca_topic_score_gemma":0.0000013381133,"teacher_disagreement_score":0.036885973,"about_ca_system_score_codex":0.0000042205766,"about_ca_system_score_gemma":0.000101349644,"threshold_uncertainty_score":0.41653457},"labels":[],"label_agreement":null},{"id":"W3037123232","doi":"10.1172/jci136174","title":"Kv1.3 modulates neuroinflammation and neurodegeneration in Parkinson’s disease","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Neuroinflammation and Neurodegeneration Mechanisms","field":"Neuroscience","cited_by":116,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"National Institute of Environmental Health Sciences; National Institute of Neurological Disorders and Stroke; National Institutes of Health; Iowa State University; Florida State University; National Institute on Aging; Brigham and Women's Hospital","keywords":"Neuroinflammation; Neurodegeneration; FYN; Downregulation and upregulation; Microglia; Neuroscience; Cell biology; Biology; Signal transduction; Medicine; Inflammation; Immunology; Disease; Internal medicine; Biochemistry; Proto-oncogene tyrosine-protein kinase Src","score_opus":0.13248442661624749,"score_gpt":0.3374277344465723,"score_spread":0.20494330783032483,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3037123232","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97812617,0.00002404306,0.0014206704,0.01966009,0.00048810773,0.00020823047,0.0000026864789,0.000036075846,0.000033903143],"genre_scores_gemma":[0.9905631,0.00026099704,0.0007896255,0.0077771763,0.000562447,0.0000031925726,0.0000026263092,0.000018991504,0.000021859816],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9966271,0.0008358938,0.0016188208,0.0003446395,0.0004396956,0.00013386509],"domain_scores_gemma":[0.99785614,0.00048060511,0.00092537905,0.00012377888,0.00010857943,0.0005055083],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0007355699,0.00014492021,0.00029749892,0.00014647495,0.00007552142,0.000118575874,0.00015248753,0.00006986028,0.000020346384],"category_scores_gemma":[0.008628785,0.00013378123,0.00009862525,0.00032789222,0.00009909628,0.0008862285,0.000038272065,0.00040943836,0.000017142356],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000296875,0.000053439413,0.021176226,0.000036368197,0.0000020818513,0.000112164475,0.00023572649,0.009057102,0.9577099,0.006110236,0.0004608831,0.0047489624],"study_design_scores_gemma":[0.0019818551,0.0005234807,0.12995231,0.000046445028,0.00002860485,0.000038327587,0.000013063034,0.29931986,0.55753213,0.0068104803,0.0035139704,0.00023947621],"about_ca_topic_score_codex":6.865064e-7,"about_ca_topic_score_gemma":0.000002236624,"teacher_disagreement_score":0.4001778,"about_ca_system_score_codex":0.000010573268,"about_ca_system_score_gemma":0.00012791283,"threshold_uncertainty_score":0.99972194},"labels":[],"label_agreement":null},{"id":"W3040062773","doi":"10.1172/jci135373","title":"LIN28B promotes the development of neuroendocrine prostate cancer","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":115,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; China Scholarship Council; Terry Fox Research Institute; National Natural Science Foundation of China; U.S. Department of Defense","keywords":"SOX2; Prostate cancer; Cancer research; Biology; HMGA2; Carcinogenesis; Neuroendocrine differentiation; CD44; Cancer stem cell; Stem cell; Prostate; Transcription factor; Cancer; Cell; Cell biology; microRNA; Gene; Genetics","score_opus":0.20406593367824788,"score_gpt":0.45205943056501474,"score_spread":0.24799349688676686,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3040062773","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9329009,0.00057868456,0.000044864042,0.06594947,0.00015978901,0.00027993196,0.00000205138,0.0000059026934,0.000078408775],"genre_scores_gemma":[0.99433994,0.00055319,0.0030033947,0.0013754225,0.00051324355,0.0000074377645,0.000004239883,0.000010190303,0.00019293596],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99808836,0.00011456657,0.0011677471,0.000097215394,0.00041781407,0.00011431032],"domain_scores_gemma":[0.99839264,0.00021719238,0.0006321379,0.000077669094,0.0004168662,0.00026347136],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006399777,0.00007452466,0.00033203518,0.00003394104,0.000042731837,0.000010608915,0.00009829036,0.00002576833,0.000039169427],"category_scores_gemma":[0.0012733748,0.000038050057,0.00012015436,0.00019691444,0.0001931661,0.0000870768,0.00003255438,0.00040606037,0.000004631363],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0031927405,0.00037384575,0.78166187,0.00055295374,0.00061409833,0.00014008651,0.005087413,0.000062411054,0.026660662,0.00008102914,0.0049858764,0.176587],"study_design_scores_gemma":[0.0090609575,0.0042953794,0.643304,0.00096069527,0.00040532937,0.000070659305,0.0004425436,0.0017792003,0.31007665,0.0012301586,0.028206153,0.00016829518],"about_ca_topic_score_codex":0.0000030814338,"about_ca_topic_score_gemma":0.00000270604,"teacher_disagreement_score":0.283416,"about_ca_system_score_codex":0.000024302342,"about_ca_system_score_gemma":0.0011713288,"threshold_uncertainty_score":0.2077887},"labels":[],"label_agreement":null},{"id":"W3041489599","doi":"10.1172/jci137536","title":"Dengue virus induces PCSK9 expression to alter antiviral responses and disease outcomes","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":73,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute","funders":"National Medical Research Council; Medical Research Council; Duke-NUS Medical School; Wellcome Trust; Wellcome","keywords":"Dengue virus; Dengue fever; PCSK9; Viremia; Virology; Biology; Antibody-dependent enhancement; Cholesterol; Immunology; LDL receptor; Flavivirus; Virus; Lipoprotein; Endocrinology","score_opus":0.11395871799666214,"score_gpt":0.4184368176407498,"score_spread":0.3044780996440877,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3041489599","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95251316,0.00033444917,0.00022602627,0.046483863,0.00021309992,0.00018256997,0.000011057214,0.00001309023,0.000022692842],"genre_scores_gemma":[0.9722263,0.000057773806,0.0010245785,0.025665352,0.00094007724,0.000003279583,0.0000035359828,0.000012461515,0.00006660793],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980923,0.00025862412,0.0009655536,0.00018949156,0.0003718447,0.00012216734],"domain_scores_gemma":[0.99721384,0.0004901868,0.00043046812,0.00012914247,0.00017843123,0.0015579086],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.00060705526,0.000118857606,0.00048967724,0.000069036316,0.000045234545,0.000043146865,0.00008615805,0.00007697226,0.00003360422],"category_scores_gemma":[0.011614613,0.000080952756,0.000217312,0.00010169208,0.000091410664,0.00022626626,0.00004702452,0.00030025904,0.000013933511],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005859008,0.00020180763,0.8953812,0.000088502435,0.00010494341,0.00031812658,0.00033723592,0.000007662309,0.07087017,0.00012833066,0.008513406,0.018189585],"study_design_scores_gemma":[0.0025311965,0.0008619144,0.9860383,0.00028529472,0.00029754487,0.0000073358096,0.00008299814,0.0003324412,0.0060925577,0.0007714628,0.00258805,0.00011084986],"about_ca_topic_score_codex":0.0000032321045,"about_ca_topic_score_gemma":7.005228e-7,"teacher_disagreement_score":0.09065713,"about_ca_system_score_codex":0.000009659728,"about_ca_system_score_gemma":0.00029667292,"threshold_uncertainty_score":0.99671096},"labels":[],"label_agreement":null},{"id":"W3042402536","doi":"10.1172/jci133780","title":"A coagulation defect arising from heterozygous premature termination of tissue factor","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Blood Coagulation and Thrombosis Mechanisms","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Nutrasource","funders":"National Heart, Lung, and Blood Institute; NIHR BioResource; National Institute for Health and Care Research; Nihon Superior; NHS Blood and Transplant; Hemostasis and Thrombosis Research Society; Swedish Orphan Biovitrum; Department of Health and Social Care; CSL Behring; National Institutes of Health; National Hemophilia Foundation","keywords":"Tissue factor; Coagulation; Medicine; Factor IX; Heterozygote advantage; Internal medicine; Biology; Genetics; Allele","score_opus":0.14159140759539438,"score_gpt":0.39934002601503693,"score_spread":0.2577486184196426,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3042402536","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9876138,0.00009603647,0.007870533,0.003713616,0.0003887119,0.00021908116,0.000007618944,0.00002053737,0.00007007761],"genre_scores_gemma":[0.98590016,0.000019351597,0.012031963,0.0012338753,0.00075949327,7.422946e-7,0.000028600574,0.000014988463,0.000010851762],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.997539,0.00021926388,0.0015228422,0.00015235446,0.0004848233,0.000081716105],"domain_scores_gemma":[0.9972152,0.00034613235,0.0016008433,0.0001224619,0.00043097822,0.00028434664],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004818603,0.000111396366,0.00061180245,0.00008164361,0.000028542765,0.000020664003,0.00007558866,0.00024249287,0.00009205247],"category_scores_gemma":[0.0021963173,0.00009174775,0.00026455973,0.00018758074,0.0000681611,0.0002676137,0.000017437907,0.00039170883,0.000008478392],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000788302,0.0003891114,0.18539971,0.0002793253,0.0004770586,0.00003504856,0.0024831607,0.00027119147,0.749483,0.00051572634,0.00076841365,0.059109982],"study_design_scores_gemma":[0.0031355228,0.0020558666,0.74036306,0.0005311981,0.0005160486,0.000029348077,0.00008112619,0.007407943,0.24008022,0.0052359416,0.00043238484,0.00013134394],"about_ca_topic_score_codex":0.0000060022016,"about_ca_topic_score_gemma":0.0000017826314,"teacher_disagreement_score":0.55496335,"about_ca_system_score_codex":0.00002159221,"about_ca_system_score_gemma":0.00014758957,"threshold_uncertainty_score":0.37413648},"labels":[],"label_agreement":null},{"id":"W3045373257","doi":"10.1172/jci140461","title":"Diagnostic accuracy of 3 urine lipoarabinomannan tuberculosis assays in HIV-negative outpatients","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":91,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institutes of Health; Global Health Innovative Technology Fund; Department of Foreign Affairs and Trade, Australian Government; National Institute of Allergy and Infectious Diseases; Bill and Melinda Gates Foundation; McMaster University; Department for International Development; Ministerie van Buitenlandse Zaken; Bundesministerium für Bildung und Forschung","keywords":"Lipoarabinomannan; Medicine; Point-of-care testing; Tuberculosis; Tuberculosis diagnosis; Human immunodeficiency virus (HIV); Urine; Mycobacterium tuberculosis; Internal medicine; Immunology; Virology; Pathology","score_opus":0.13226162645596107,"score_gpt":0.41987120717778026,"score_spread":0.2876095807218192,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3045373257","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9437831,0.00017014415,0.000117400305,0.055168137,0.00017291671,0.00028170878,0.000008465118,0.0000074625923,0.00029069206],"genre_scores_gemma":[0.99117565,0.0006352081,0.0027961384,0.004729128,0.0006133753,0.000005463331,0.000015044227,0.000014290523,0.000015691463],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99547046,0.0008475121,0.002717495,0.00021352833,0.0005076404,0.0002433432],"domain_scores_gemma":[0.98697156,0.009711395,0.0015596255,0.00019491011,0.0006767735,0.000885745],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0023920282,0.000140734,0.0010425209,0.00018628992,0.000021110089,0.000007730064,0.00017451105,0.00020275678,0.00008584524],"category_scores_gemma":[0.1989736,0.00010679272,0.00033022935,0.00042261748,0.00030830404,0.00027957268,0.00006482667,0.000977055,0.00003947979],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007625358,0.00033294893,0.9835963,0.0001361414,0.00014087762,0.00009036035,0.0003952784,0.00016540755,0.00091748236,0.000117033,0.008670959,0.00467467],"study_design_scores_gemma":[0.0036931338,0.0030831026,0.9844177,0.0004828463,0.000112077825,0.000024315124,0.000105929874,0.0027993976,0.0025568642,0.0020414148,0.0005922179,0.00009103226],"about_ca_topic_score_codex":0.000059833787,"about_ca_topic_score_gemma":0.000012739859,"teacher_disagreement_score":0.19658157,"about_ca_system_score_codex":0.00005537445,"about_ca_system_score_gemma":0.00035937838,"threshold_uncertainty_score":0.80777377},"labels":[],"label_agreement":null},{"id":"W3046286246","doi":"10.1172/jci141718","title":"Is multisystem inflammatory syndrome in children on the Kawasaki syndrome spectrum?","year":2020,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Kawasaki Disease and Coronary Complications","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"Roy J. and Lucille A. Carver College of Medicine, University of Iowa; Hospital for Sick Children; University of Toronto","keywords":"Kawasaki disease; Medicine; Systemic inflammatory response syndrome; Disease; Cardiogenic shock; Acute coronary syndrome; Immunology; Multisystem disease; Toxic shock syndrome; Intensive care medicine; Pediatrics; Sepsis; Pathology; Cardiology; Staphylococcus aureus","score_opus":0.07953073666397678,"score_gpt":0.34177037380620096,"score_spread":0.2622396371422242,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3046286246","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.45380422,0.00014209724,0.000008827359,0.5450294,0.00028481192,0.0005292771,0.00002183936,0.000019855283,0.00015967338],"genre_scores_gemma":[0.51765686,0.00008651704,0.00008555215,0.47944602,0.0023507206,0.0000188354,0.00007682047,0.000046412977,0.00023225068],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99477345,0.0006646422,0.0028533102,0.00041977642,0.0010031491,0.0002856878],"domain_scores_gemma":[0.9956089,0.0010743797,0.0020806736,0.00067265495,0.00018730544,0.0003760434],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0009498071,0.00035522372,0.0012245835,0.00030661136,0.00009712496,0.000054339413,0.0005217659,0.00064978196,0.00023226807],"category_scores_gemma":[0.0010385996,0.00024372543,0.0007804809,0.0003885738,0.00026823627,0.00016370155,0.00006201015,0.004876108,0.00036401013],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011418048,0.00014485323,0.21139129,0.00019625796,0.00056137587,0.0043930383,0.00008435803,0.000007245137,0.0000108834665,0.0001553165,0.782684,0.00025714608],"study_design_scores_gemma":[0.0015072476,0.0012193258,0.9593165,0.0022952084,0.000516637,0.0047087,0.000020427547,0.00020239537,0.000019299916,0.004055821,0.02586929,0.00026914224],"about_ca_topic_score_codex":0.00001301591,"about_ca_topic_score_gemma":0.000001525661,"teacher_disagreement_score":0.7568148,"about_ca_system_score_codex":0.0001510649,"about_ca_system_score_gemma":0.0008631299,"threshold_uncertainty_score":0.99741966},"labels":[],"label_agreement":null},{"id":"W3049131713","doi":"10.1172/jci140585","title":"Coordination of metabolism, arousal, and reward by orexin/hypocretin neurons","year":2020,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Sleep and Wakefulness Research","field":"Neuroscience","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut universitaire de cardiologie et de pneumologie de Québec","funders":"","keywords":"Orexin; Arousal; Lateral hypothalamus; Orexin-A; Neuroscience; Homeostasis; Hypothalamus; Energy homeostasis; Biology; Psychology; Endocrinology; Internal medicine; Neuropeptide; Medicine; Obesity; Receptor","score_opus":0.1580094640168639,"score_gpt":0.39018378958739686,"score_spread":0.23217432557053297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3049131713","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.22721112,0.0002515003,0.00024117669,0.770635,0.0011490212,0.00025635894,0.000064233645,0.000019828396,0.00017172513],"genre_scores_gemma":[0.28686115,0.0013514474,0.00081584655,0.70298797,0.0072680265,0.000010638961,0.000054632335,0.00010463778,0.00054566126],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99398917,0.0017826884,0.0022246016,0.0004283665,0.001317922,0.00025722847],"domain_scores_gemma":[0.9927597,0.0037326918,0.0025584337,0.00023688468,0.00040866213,0.0003036065],"candidate_categories":["metaresearch","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0014500199,0.00024063418,0.000998427,0.000238769,0.00008301114,0.000101322024,0.0005154074,0.0005679704,0.000037345708],"category_scores_gemma":[0.024057997,0.00019803803,0.00029822253,0.00044519617,0.0009289515,0.0003675964,0.00011322416,0.0034576317,0.000012776473],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009212299,0.00004241665,0.0010040527,0.00011285333,0.000032743967,0.00014755549,0.00005630346,0.0000044874423,0.017855125,0.000094515635,0.9771999,0.003357911],"study_design_scores_gemma":[0.0023569025,0.0013145914,0.0021803998,0.00035157733,0.0003814454,0.00014894313,0.000024850644,0.0014323792,0.104288355,0.013471843,0.87357634,0.0004723757],"about_ca_topic_score_codex":0.000011452998,"about_ca_topic_score_gemma":4.4566374e-7,"teacher_disagreement_score":0.10362358,"about_ca_system_score_codex":0.000019910665,"about_ca_system_score_gemma":0.00033787332,"threshold_uncertainty_score":0.9988414},"labels":[],"label_agreement":null},{"id":"W3049616059","doi":"10.1172/jci139741","title":"Truncated stathmin-2 is a marker of TDP-43 pathology in frontotemporal dementia","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Amyotrophic Lateral Sclerosis Research","field":"Medicine","cited_by":257,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Robert Packard Center for ALS Research, Johns Hopkins University; National Institute of Environmental Health Sciences; Canadian Institutes of Health Research; National Institutes of Health; UK Dementia Research Institute; University College London; National Institute of Neurological Disorders and Stroke; National Institute for Health and Care Research; New York Genome Center; ALS Association; Alzheimer's Society; Tow Foundation; Motor Neurone Disease Association; Johns Hopkins University; Medical Research Council; Mayo Clinic; National Institute on Aging; Target ALS; University College London Hospitals NHS Foundation Trust; Rosetrees Trust; U.S. Department of Defense","keywords":"Frontotemporal dementia; Frontotemporal lobar degeneration; Stathmin; Progressive supranuclear palsy; Dementia; Tauopathy; Pathological; Pathology; Tau protein; Biology; Neurodegeneration; Medicine; Disease; Alzheimer's disease; Genetics; Phosphorylation","score_opus":0.18521537845934716,"score_gpt":0.4231322452937557,"score_spread":0.23791686683440855,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3049616059","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.970084,0.00019309443,0.00020721133,0.029079871,0.00012192938,0.000172404,0.0000042658744,0.000005632686,0.00013156718],"genre_scores_gemma":[0.98942053,0.00017376865,0.0056671477,0.004369627,0.00030144062,0.0000015703966,0.000007412121,0.000013343283,0.000045142508],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9965488,0.0004575587,0.002099051,0.0001713077,0.00054545794,0.0001778804],"domain_scores_gemma":[0.9978048,0.00024711917,0.0009094745,0.00013033983,0.00038778255,0.0005204824],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002011924,0.00010007496,0.00068340485,0.00010726967,0.000013838777,0.00000879268,0.00013405165,0.00019795973,0.0005418041],"category_scores_gemma":[0.0039124503,0.00007530204,0.00020550714,0.0002914597,0.00025895002,0.00017649721,0.000050590133,0.0007096544,0.000017891412],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015010143,0.00017465078,0.96382946,0.00008645193,0.0001446403,0.00020248808,0.0006965992,0.000014253379,0.020869236,0.000031743417,0.0068569197,0.0055925394],"study_design_scores_gemma":[0.003911242,0.0017548832,0.9881926,0.00017996125,0.000090003676,0.00002453201,0.0000529914,0.0027096733,0.0010897175,0.0010353782,0.0008954308,0.000063552696],"about_ca_topic_score_codex":0.000038402388,"about_ca_topic_score_gemma":0.000007148949,"teacher_disagreement_score":0.024710244,"about_ca_system_score_codex":0.00004272368,"about_ca_system_score_gemma":0.00056117406,"threshold_uncertainty_score":0.5932376},"labels":[],"label_agreement":null},{"id":"W3080515671","doi":"10.1172/jci131799","title":"Haploidentical mixed chimerism cures autoimmunity in established type 1 diabetic mice","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Diabetes and associated disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Nutrition, Metabolism and Diabetes","funders":"National Institute of Allergy and Infectious Diseases; National Cancer Institute; National Institutes of Health; Army Medical University; Legacy Heritage Fund","keywords":"Autoimmunity; Immunology; Graft-versus-host disease; Immune tolerance; Transplantation; Immune system; Biology; Medicine; Internal medicine","score_opus":0.0422690983918273,"score_gpt":0.3275281912207282,"score_spread":0.2852590928289009,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3080515671","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99541724,0.00044457725,0.000070790025,0.0034316254,0.00041251973,0.00005978759,0.000001981055,0.000004790874,0.00015667257],"genre_scores_gemma":[0.9965546,0.00020542437,0.00073822244,0.002087813,0.00034614408,7.787889e-7,0.000026386322,0.000012180135,0.000028411403],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983057,0.0003244429,0.00089950586,0.0001428964,0.00017686182,0.00015062465],"domain_scores_gemma":[0.998936,0.00010500177,0.0004718567,0.000095860276,0.00018433845,0.00020694223],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00092340703,0.00009544829,0.0002986855,0.00003501022,0.00002758582,0.000038263413,0.00020136191,0.00020153521,0.000021001733],"category_scores_gemma":[0.006112122,0.00008614378,0.00015189643,0.00019943884,0.00013799148,0.000018263716,0.000056770434,0.00040172876,0.00000931987],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004281386,0.00048840704,0.66237617,0.00005736832,0.0002642831,0.000017221091,0.00029453085,0.00060748984,0.30240268,0.00013670826,0.021628574,0.011298464],"study_design_scores_gemma":[0.0035817858,0.002048464,0.94320667,0.000120777775,0.00012543141,0.000004019144,0.00029228916,0.0019045414,0.033779714,0.0025311674,0.012062233,0.00034290593],"about_ca_topic_score_codex":0.000009963074,"about_ca_topic_score_gemma":0.000009455955,"teacher_disagreement_score":0.28083053,"about_ca_system_score_codex":0.000007242427,"about_ca_system_score_gemma":0.00019161036,"threshold_uncertainty_score":0.73172224},"labels":[],"label_agreement":null},{"id":"W3080643008","doi":"10.1172/jci138728","title":"Vaccine targeting SIVmac251 protease cleavage sites protects macaques against vaginal infection","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune responses and vaccinations","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"George & Fay Yee Centre for Healthcare Innovation; CenterLine (Canada); Public Health Agency of Canada; University of Manitoba","funders":"National Institute of Allergy and Infectious Diseases; NIH Office of the Director; Canadian Institutes of Health Research; Public Health Agency of Canada; National Institutes of Health; National Center for Research Resources; Public Health Agency; University of Wisconsin-Madison","keywords":"Protease; Virology; Cleavage (geology); Medicine; Biology; Microbiology; Enzyme; Biochemistry","score_opus":0.06407003859074742,"score_gpt":0.34997761551151696,"score_spread":0.2859075769207695,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3080643008","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98654747,0.0007973889,0.0013806259,0.01018759,0.0005200588,0.00036353598,0.0000045389006,0.000050865157,0.00014793842],"genre_scores_gemma":[0.9961052,0.00024776114,0.0010028526,0.0019452075,0.00055042625,0.000008699608,0.000040676678,0.000017325496,0.00008183361],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99716854,0.00088519155,0.0014767692,0.00018644043,0.000083816354,0.00019921255],"domain_scores_gemma":[0.9976502,0.0004373233,0.001301221,0.00010433931,0.00039549082,0.00011143332],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014691866,0.00015437375,0.00043955122,0.00011362376,0.00018018557,0.000038101683,0.00015455736,0.00026415076,0.00012227055],"category_scores_gemma":[0.007308536,0.00012566488,0.00024855198,0.00025552226,0.00007730565,0.00040148574,0.000052798103,0.0009978254,0.00012067796],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020113916,0.0003040989,0.13166751,0.00013787064,0.0003738977,0.000036134912,0.00070080766,0.00019585535,0.80145377,0.00048982096,0.037226543,0.025402315],"study_design_scores_gemma":[0.008634086,0.0046215984,0.30103314,0.00033111544,0.0002745486,0.00014048285,0.00021318145,0.0008494971,0.566717,0.0023600357,0.11426316,0.0005621156],"about_ca_topic_score_codex":0.0000133963085,"about_ca_topic_score_gemma":0.000002049983,"teacher_disagreement_score":0.23473671,"about_ca_system_score_codex":0.000028180713,"about_ca_system_score_gemma":0.00022649347,"threshold_uncertainty_score":0.8749528},"labels":[],"label_agreement":null},{"id":"W3087272604","doi":"10.1172/jci139700","title":"The ABO histo-blood group, endothelial activation, and acute respiratory distress syndrome risk in critical illness","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Sepsis Diagnosis and Treatment","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; Genentech; National Institutes of Health; Perelman School of Medicine, University of Pennsylvania; China Scholarship Council; Marcus Foundation; University of Pennsylvania","keywords":"Medicine; ARDS; ABO blood group system; Disseminated intravascular coagulation; Hypoxemia; Pulmonary edema; Immunology; Endothelial dysfunction; Internal medicine; Lung","score_opus":0.1583511832275546,"score_gpt":0.4223484758593966,"score_spread":0.263997292631842,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3087272604","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97367233,0.0004919112,0.00009000146,0.025261993,0.00026608608,0.00015811327,0.000012653602,0.000008244038,0.000038646856],"genre_scores_gemma":[0.99514246,0.0007039765,0.00046224208,0.0031855307,0.00047208145,0.000009403725,0.0000039958836,0.000012513682,0.000007795592],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977944,0.00035317236,0.0011939312,0.0001762813,0.0003515485,0.00013068276],"domain_scores_gemma":[0.9963916,0.0023818277,0.0005378988,0.00012752635,0.000178141,0.00038303502],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011167766,0.00011213744,0.00043171403,0.00004659336,0.00011485242,0.00004111868,0.00008364778,0.00011991681,0.000012580534],"category_scores_gemma":[0.008021039,0.00006982588,0.00014237106,0.00014526235,0.00035728578,0.00019145299,0.000024960334,0.00055705995,0.0000036971087],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008195649,0.00064682314,0.9755326,0.00005493164,0.00039361848,0.00048760013,0.00047665456,0.000007053264,0.0009612357,0.0023210116,0.0015557811,0.01674313],"study_design_scores_gemma":[0.0045759897,0.002025251,0.98370016,0.00024808742,0.0005902835,0.00011630279,0.00012805549,0.00013098589,0.0017558632,0.0031352122,0.0034976746,0.00009613379],"about_ca_topic_score_codex":0.000012558613,"about_ca_topic_score_gemma":0.000006604108,"teacher_disagreement_score":0.022076461,"about_ca_system_score_codex":0.000041375464,"about_ca_system_score_gemma":0.00012597347,"threshold_uncertainty_score":0.9602513},"labels":[],"label_agreement":null},{"id":"W3092108146","doi":"10.1172/jci137265","title":"Landscape of coordinated immune responses to H1N1 challenge in humans","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Cancer Institute; National Human Genome Research Institute; Sanofi Pasteur; Juno Therapeutics; Stanford Bio-X; National Institutes of Health; Hamilton Health Sciences Foundation; Canadian Institutes of Health Research; Parker Institute for Cancer Immunotherapy; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Kenneth Rainin Foundation; Novavax; Celgene; U.S. Department of Defense; Silicon Valley Community Foundation; National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute of Diabetes and Digestive and Kidney Diseases; Sanofi; Cancer Research Institute; National Heart, Lung, and Blood Institute; Pfizer; Bill and Melinda Gates Foundation; Cancer Research UK; Doris Duke Charitable Foundation; U.S. Food and Drug Administration; National Institute of General Medical Sciences; Burroughs Wellcome Fund; National Science Foundation","keywords":"Immune system; Mass cytometry; CD38; Virus; Immunology; Biology; T cell; Cell; Influenza A virus; Monocyte; Virology; Cell biology; Phenotype; Genetics; Stem cell","score_opus":0.08494406879469951,"score_gpt":0.33989440638050816,"score_spread":0.25495033758580865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3092108146","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9845973,0.0019298955,0.00005884305,0.012344544,0.0006448331,0.00011599852,0.000005298073,0.000012483479,0.00029079744],"genre_scores_gemma":[0.99831223,0.00026641446,0.00021035915,0.0008107672,0.000102197046,0.0000018187171,0.000010783073,0.000010308809,0.0002750946],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.996952,0.0007918376,0.0018553169,0.00016699842,0.000053514705,0.00018030705],"domain_scores_gemma":[0.9979337,0.00074883224,0.0008764758,0.00014422297,0.00022581579,0.00007097968],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014266839,0.00011993199,0.0006943592,0.00017543933,0.00003722975,0.0000057903935,0.000292537,0.00034114733,0.00023100335],"category_scores_gemma":[0.002737599,0.00009819165,0.00018246294,0.00026941227,0.00026395728,0.0001084081,0.000071044,0.00072667433,0.00011942331],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018712456,0.00022734022,0.04314966,0.000023516644,0.00011988148,0.00002061836,0.0010761848,0.00002596664,0.9484089,0.00041043153,0.002548539,0.0021176864],"study_design_scores_gemma":[0.014319137,0.012326043,0.3473536,0.00053489587,0.00019522624,0.000071317685,0.0016014962,0.00005294832,0.5782107,0.0030309416,0.041790508,0.0005131822],"about_ca_topic_score_codex":0.000021548785,"about_ca_topic_score_gemma":0.000011861656,"teacher_disagreement_score":0.37019822,"about_ca_system_score_codex":0.000011793033,"about_ca_system_score_gemma":0.00016480623,"threshold_uncertainty_score":0.40041393},"labels":[],"label_agreement":null},{"id":"W3092471114","doi":"10.1172/jci140424","title":"Hypothalamic REV-ERB nuclear receptors control diurnal food intake and leptin sensitivity in diet-induced obese mice","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Circadian rhythm and melatonin","field":"Neuroscience","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Nutrition, Metabolism and Diabetes","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institutes of Health; JPB Foundation; University of Pennsylvania; Eli Lilly and Company; Pfizer; American Diabetes Association","keywords":"Leptin; Endocrinology; Internal medicine; Hypothalamus; Leptin receptor; Arcuate nucleus; Obesity; Food intake; Circadian rhythm; Biology; Arc (geometry); Nucleus; Receptor; Medicine; Neuroscience","score_opus":0.1055160968740082,"score_gpt":0.318158460733943,"score_spread":0.2126423638599348,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3092471114","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98862845,0.00006687724,0.00006980303,0.010318232,0.00060752407,0.00016856074,0.0000051837314,0.000018317354,0.00011706703],"genre_scores_gemma":[0.9926286,0.00015285358,0.00037344627,0.006067435,0.00074543396,7.87523e-7,4.1740103e-7,0.000021930502,0.0000091164375],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.996782,0.0009224432,0.0013937654,0.0003137453,0.00036136675,0.00022668423],"domain_scores_gemma":[0.99683124,0.0014478039,0.00096210855,0.00010693908,0.00008954999,0.0005623828],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0019528702,0.00015721504,0.0005544253,0.000100067264,0.00007403939,0.00006985012,0.00012250709,0.00020190045,0.000018792196],"category_scores_gemma":[0.011946842,0.00014184149,0.00017107364,0.0002980145,0.00025297515,0.0004940172,0.000040448005,0.0011532452,0.000025094656],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012162727,0.00019766208,0.15030186,0.000067327834,0.000034592988,0.00034268454,0.0017824329,0.00014763315,0.8325199,0.002689337,0.0006206283,0.010079671],"study_design_scores_gemma":[0.010510793,0.0052466607,0.7741846,0.0006047672,0.00012737047,0.0005998444,0.0004215441,0.014654384,0.18677424,0.0030407049,0.0032289377,0.00060620334],"about_ca_topic_score_codex":0.0000054587476,"about_ca_topic_score_gemma":0.0000155495,"teacher_disagreement_score":0.6457457,"about_ca_system_score_codex":0.000041023857,"about_ca_system_score_gemma":0.00015632028,"threshold_uncertainty_score":0.996376},"labels":[],"label_agreement":null},{"id":"W3098436432","doi":"10.1172/jci128650","title":"The loss-of-function PCSK9Q152H variant increases ER chaperones GRP78 and GRP94 and protects against liver injury","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Endoplasmic Reticulum Stress and Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Centre Hospitalier de l’Université de Montréal; Montreal Clinical Research Institute; Hamilton Health Sciences; Population Health Research Institute","funders":"Canadian Institutes of Health Research; Canada Research Chairs; Amgen Canada; Amgen; Fondation Leducq; McMaster University; Rutgers Cancer Institute of New Jersey; Heart and Stroke Foundation of Canada","keywords":"Endoplasmic reticulum; PCSK9; Unfolded protein response; Liver injury; Proprotein convertase; Kexin; Biology; Endocrinology; Liver disease; Loss function; Internal medicine; Cell biology; Cholesterol; LDL receptor; Medicine; Lipoprotein; Phenotype; Biochemistry; Gene","score_opus":0.03500007966507407,"score_gpt":0.3028957084122491,"score_spread":0.26789562874717504,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3098436432","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99653244,0.0016943181,0.00029443493,0.0012264396,0.00009743362,0.0001080339,0.000006036924,0.00000224312,0.000038627015],"genre_scores_gemma":[0.995059,0.0032018363,0.00032880134,0.0009363876,0.0004485017,0.0000027378403,0.0000060881393,0.0000067708097,0.000009883666],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99894255,0.00016352821,0.0005478176,0.00013361576,0.00013598998,0.00007650534],"domain_scores_gemma":[0.9989468,0.00011538447,0.00047242263,0.00008491115,0.00014752828,0.00023296784],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045590496,0.00008205455,0.00017077767,0.000014090368,0.00006928232,0.000028341798,0.00006870976,0.000100118166,0.0000022838183],"category_scores_gemma":[0.0021129542,0.000052854546,0.0000740941,0.00004217741,0.00032743433,0.000015270803,0.000058278183,0.00014176047,5.572169e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008287167,0.0005009875,0.42788833,0.0006209761,0.00078333565,0.00012263955,0.00046300655,0.00020828022,0.41879812,0.0037594168,0.00833902,0.13022873],"study_design_scores_gemma":[0.007569609,0.011323951,0.82772404,0.0006129438,0.0006144892,0.00019301067,0.000530418,0.006842419,0.10753292,0.0089226095,0.0273549,0.00077871047],"about_ca_topic_score_codex":0.000006405649,"about_ca_topic_score_gemma":0.000002723474,"teacher_disagreement_score":0.39983568,"about_ca_system_score_codex":0.000002014694,"about_ca_system_score_gemma":0.000101538724,"threshold_uncertainty_score":0.25295562},"labels":[],"label_agreement":null},{"id":"W3103217889","doi":"10.1172/jci138532","title":"Cholinergic dysfunction in the dorsal striatum promotes habit formation and maladaptive eating","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Eating Disorders and Behaviors","field":"Psychology","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Douglas Mental Health University Institute; Western University","funders":"Canadian Institutes of Health Research; Université Pierre et Marie Curie; National Institute of Mental Health; Centre National de la Recherche Scientifique; Fonds de Recherche du Québec - Santé; Fondation de France; Institut National de la Santé et de la Recherche Médicale; Agence Nationale de la Recherche; Natural Sciences and Engineering Research Council of Canada; Fondation Brain Canada","keywords":"Acetylcholine; Striatum; Cholinergic; Dopamine; Psychology; Neuroscience; Glutamate receptor; Endocrinology; Internal medicine; Biology; Medicine","score_opus":0.12702707016754816,"score_gpt":0.3861936196901181,"score_spread":0.25916654952256996,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3103217889","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9910691,0.00012104326,0.00055440713,0.007401791,0.00034105885,0.00016504081,0.0000010089797,0.000008725785,0.00033784512],"genre_scores_gemma":[0.99741554,0.000015284173,0.000779232,0.0013193622,0.00043579098,0.000004357833,0.000005302167,0.000006939537,0.000018174707],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979441,0.0005189623,0.0010955398,0.0001190124,0.00021772707,0.00010462362],"domain_scores_gemma":[0.9983993,0.00046836725,0.0008862086,0.00006857143,0.00010183631,0.00007571064],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017770919,0.000083853396,0.00022340039,0.00005603699,0.000055501725,0.000045614397,0.00010420707,0.00012669855,0.000030731295],"category_scores_gemma":[0.0013140113,0.000055360397,0.000081527185,0.00021614243,0.000094834846,0.00033136914,0.000013788805,0.00059306517,0.0000070102797],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033488902,0.0002504634,0.9449723,0.00003348019,0.00003197552,0.000025791753,0.015877465,0.00020713189,0.00061845797,0.0017582781,0.0026262759,0.03326349],"study_design_scores_gemma":[0.0021969355,0.0018172056,0.9836365,0.0001031004,0.00006911353,0.000044043798,0.0044590454,0.004424478,0.00003643109,0.0028704365,0.0002444547,0.00009826877],"about_ca_topic_score_codex":0.000022580278,"about_ca_topic_score_gemma":0.000010270584,"teacher_disagreement_score":0.038664185,"about_ca_system_score_codex":0.0000102701015,"about_ca_system_score_gemma":0.000038288093,"threshold_uncertainty_score":0.2576606},"labels":[],"label_agreement":null},{"id":"W3112963515","doi":"10.1172/jci139927","title":"Biomarkers of inflammation and repair in kidney disease progression","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Acute Kidney Injury Research","field":"Medicine","cited_by":185,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"National Center for Advancing Translational Sciences; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; National Institutes of Health; Akebia Therapeutics","keywords":"Kidney disease; Medicine; Acute kidney injury; Inflammation; Disease; Kidney; Intensive care medicine; Bioinformatics; Pathology; Internal medicine; Biology","score_opus":0.11045748687184008,"score_gpt":0.4407257322499085,"score_spread":0.3302682453780684,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3112963515","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9406706,0.000112662085,0.000048842747,0.058745924,0.00007578486,0.00023710314,0.000010320308,0.000010866336,0.00008786154],"genre_scores_gemma":[0.9914372,0.00017829168,0.0062532867,0.0016779079,0.00040925384,0.0000029416176,0.000018146482,0.000009513964,0.000013446096],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99766254,0.00025990265,0.0013906709,0.0001211553,0.00047637374,0.000089333094],"domain_scores_gemma":[0.9974117,0.00025895433,0.00071185513,0.000098282646,0.00030342783,0.0012157416],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0018822744,0.000068513946,0.000351941,0.00013372186,0.000013751426,0.0000059879226,0.00005818874,0.000097489436,0.000028353814],"category_scores_gemma":[0.02414724,0.0000512698,0.00012990084,0.00028647087,0.00025301214,0.00024363943,0.000035793215,0.00037369053,0.0000025380164],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003272262,0.000084236686,0.949099,0.0005127817,0.00007910541,0.000082110346,0.00022158954,0.0000016739148,0.014498464,0.00006479771,0.02098423,0.011099751],"study_design_scores_gemma":[0.0053307107,0.0021289338,0.962522,0.0017622763,0.00016744298,0.000019709256,0.0000808721,0.01477323,0.007631646,0.0012815403,0.004213475,0.00008817853],"about_ca_topic_score_codex":0.000001911406,"about_ca_topic_score_gemma":2.4312698e-7,"teacher_disagreement_score":0.057068016,"about_ca_system_score_codex":0.000021527458,"about_ca_system_score_gemma":0.0007856462,"threshold_uncertainty_score":0.9840728},"labels":[],"label_agreement":null},{"id":"W3113357120","doi":"10.1172/jci131517","title":"Cyclin A2 maintains colon homeostasis and is a prognostic factor in colorectal cancer","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cancer-related Molecular Pathways","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Direction Générale de l’offre de Soins; Institute of Cancer Research; Institut National Du Cancer; Ligue Contre le Cancer; Institut National de la Santé et de la Recherche Médicale; Consortium canadien en neurodégénérescence associée au vieillissement; CNIB","keywords":"Colorectal cancer; Homeostasis; Medicine; Cancer research; Internal medicine; Oncology; Cancer; Biology","score_opus":0.09012348545282048,"score_gpt":0.3795079644940478,"score_spread":0.2893844790412273,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3113357120","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97371477,0.00097233005,0.00012982673,0.024503704,0.00026210395,0.00035337586,0.000019232313,0.000012948816,0.000031702948],"genre_scores_gemma":[0.99188644,0.0010034516,0.0012576818,0.0053533805,0.00046203836,0.0000072776334,0.0000047456174,0.000019491303,0.000005524711],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997902,0.00017063227,0.0012209266,0.0002017919,0.00034422008,0.00016044223],"domain_scores_gemma":[0.9981619,0.00037453193,0.00065038196,0.00006291766,0.00021491584,0.0005353474],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053855,0.00012339036,0.00056254823,0.000104943225,0.00002385745,0.000020847625,0.00006558397,0.00022332024,0.00007579272],"category_scores_gemma":[0.004540816,0.000105566694,0.00015399817,0.00032476295,0.00018118489,0.00011734819,0.000030117872,0.00082041527,0.0000069815164],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014559602,0.00017175522,0.935872,0.00015015493,0.00019574088,0.0003173534,0.0019259519,0.00006708293,0.030704822,0.00004679573,0.00263783,0.026454508],"study_design_scores_gemma":[0.005846045,0.0031781907,0.9643305,0.00071974786,0.00027682382,0.00009727686,0.00015986049,0.0035514976,0.019138876,0.00051309325,0.0020211108,0.00016699584],"about_ca_topic_score_codex":0.00003290863,"about_ca_topic_score_gemma":0.000054461663,"teacher_disagreement_score":0.028458439,"about_ca_system_score_codex":0.000109101704,"about_ca_system_score_gemma":0.00072179764,"threshold_uncertainty_score":0.5436109},"labels":[],"label_agreement":null},{"id":"W3114353478","doi":"10.1172/jci137681","title":"Evolutionary conservation of human ketodeoxynonulosonic acid production is independent of sialoglycan biosynthesis","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of General Medical Sciences; National Institutes of Health","keywords":"Glycan; Sialic acid; Biochemistry; Biology; Mannose; Antibody; Biosynthesis; Enzyme; Glycosylation; Glycoprotein; Genetics","score_opus":0.10223160049854933,"score_gpt":0.37471423415757277,"score_spread":0.2724826336590234,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3114353478","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99137837,0.00015999956,0.0003952403,0.0076757832,0.0001237395,0.00016375817,0.000011562788,0.0000029448217,0.00008861237],"genre_scores_gemma":[0.9972065,0.00013489791,0.0015574845,0.0005058841,0.0005026609,0.0000020772927,0.000027190772,0.000009801208,0.000053481737],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976413,0.0002954868,0.0013371945,0.00018364444,0.00044755582,0.0000947687],"domain_scores_gemma":[0.99750483,0.000046324614,0.0012677597,0.00016679095,0.0008566752,0.00015762293],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011262659,0.00008927017,0.00030056635,0.000082578386,0.000041482337,0.0000070022193,0.0001745291,0.00019982224,0.000035882633],"category_scores_gemma":[0.0033642794,0.000080807,0.00020536689,0.00020209672,0.00026092932,0.000023061586,0.00004839445,0.00022521708,0.0000024545166],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000358437,0.00010179541,0.06011485,0.00007275495,0.00008055195,9.621585e-7,0.00008556985,0.000051278286,0.933596,0.00012735029,0.0040650265,0.0013453952],"study_design_scores_gemma":[0.0006690329,0.0013731703,0.088256985,0.00006643542,0.000036203815,0.000007765099,0.000064225205,0.00031316318,0.90706867,0.0008186713,0.0012488661,0.0000768345],"about_ca_topic_score_codex":0.000015095428,"about_ca_topic_score_gemma":0.0000065183604,"teacher_disagreement_score":0.02814213,"about_ca_system_score_codex":0.000013631295,"about_ca_system_score_gemma":0.0003775526,"threshold_uncertainty_score":0.40275997},"labels":[],"label_agreement":null},{"id":"W3118504306","doi":"10.1172/jci142239","title":"The discovery of insulin revisited: lessons for the modern era","year":2021,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Diabetes Management and Research","field":"Medicine","cited_by":85,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Diabetes Canada","funders":"Canadian Institutes of Health Research; University of Toronto","keywords":"Insulin; Scientific discovery; Medicine; Engineering ethics; Psychology; Internal medicine; Engineering; Cognitive science","score_opus":0.3239259357180677,"score_gpt":0.5193490346202676,"score_spread":0.1954230989021999,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3118504306","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006950946,0.98841363,0.0007025367,0.009228951,0.0005896674,0.00080497697,0.000012562118,0.0000029016353,0.00017524895],"genre_scores_gemma":[0.00009628628,0.99431777,0.0005289811,0.00024948388,0.0017217112,0.000018033974,0.000039139057,0.000025848192,0.0030027572],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99585027,0.00057930837,0.0025873436,0.00016217565,0.00064658676,0.0001743171],"domain_scores_gemma":[0.9875364,0.00868257,0.002539988,0.0004385564,0.00067176635,0.00013071837],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.007747764,0.00016263274,0.0017355308,0.000104246,0.00011085247,0.00011507681,0.00040375648,0.00023381007,0.0000073685187],"category_scores_gemma":[0.011219651,0.00006712738,0.0015982335,0.00033296578,0.000395758,0.00014093766,0.0001098584,0.0012363438,0.0000029326186],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038717608,0.000068875874,0.00004448618,0.0048745205,0.00083304767,0.0000050418707,0.000012477581,0.000003260703,6.488268e-7,0.0020687145,0.012152069,0.97989815],"study_design_scores_gemma":[0.0006264794,0.00035360688,0.0002900991,0.022233263,0.0029899327,0.0000070474516,0.00002418755,0.00042509128,0.0000023658447,0.0038658436,0.9691071,0.00007501408],"about_ca_topic_score_codex":9.4299367e-7,"about_ca_topic_score_gemma":0.0000011806145,"teacher_disagreement_score":0.9798231,"about_ca_system_score_codex":0.000034967125,"about_ca_system_score_gemma":0.0011759435,"threshold_uncertainty_score":0.9971093},"labels":[],"label_agreement":null},{"id":"W3118686664","doi":"10.1172/jci131698","title":"Concerted roles of PTEN and ATM in controlling hematopoietic stem cell fitness and dormancy","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Hematopoietic Stem Cell Transplantation","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Princess Margaret Cancer Centre; University Health Network","funders":"Canadian Institutes of Health Research","keywords":"PTEN; Biology; Tensin; DNA damage; Stem cell; Cell biology; Haematopoiesis; Hematopoietic stem cell; Genome instability; Senescence; Cancer research; PI3K/AKT/mTOR pathway; Genetics; Signal transduction; DNA","score_opus":0.06054323323607035,"score_gpt":0.3451578053508976,"score_spread":0.2846145721148272,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3118686664","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99600154,0.0018287451,0.0006293423,0.0011322749,0.00011880648,0.000122466,0.0000018861979,0.0000041409708,0.00016077243],"genre_scores_gemma":[0.99705815,0.0010359706,0.001537725,0.00023473347,0.000079525176,0.000001201859,0.0000040091854,0.000008811233,0.00003985707],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977984,0.00020311393,0.0015263195,0.0001275803,0.00025228027,0.00009232475],"domain_scores_gemma":[0.9978767,0.0008991321,0.00065952964,0.000088954475,0.00029759662,0.00017808053],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011582583,0.000087580986,0.00065266545,0.00008385376,0.000016142207,0.000012804956,0.000032520795,0.00013885114,0.000011512],"category_scores_gemma":[0.00025590978,0.000072089584,0.00007612037,0.00014568,0.0001615961,0.00012326275,0.000010303463,0.0002686804,8.059484e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00057858304,0.00023080145,0.9124259,0.001828278,0.00010995108,0.00030949793,0.003107841,0.000093930306,0.07222713,0.0005180967,0.000043794305,0.008526245],"study_design_scores_gemma":[0.027536916,0.001068871,0.6864071,0.0066034026,0.00087137474,0.0014818057,0.0034418553,0.013877305,0.25405884,0.004227079,0.00013365324,0.00029182658],"about_ca_topic_score_codex":0.000003803539,"about_ca_topic_score_gemma":0.000008554597,"teacher_disagreement_score":0.22601879,"about_ca_system_score_codex":0.000011796806,"about_ca_system_score_gemma":0.00022782877,"threshold_uncertainty_score":0.2939728},"labels":[],"label_agreement":null},{"id":"W3119978264","doi":"10.1172/jci144964","title":"Location is everything when it comes to megakaryocyte function","year":2021,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Platelet Disorders and Treatments","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier universitaire de Québec","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute","keywords":"Megakaryocyte; Platelet; Bone marrow; Immunology; Biology; Phenotype; Population; Immune system; Cell biology; Lung; Gene; Genetics; Haematopoiesis; Medicine; Internal medicine; Stem cell","score_opus":0.11973210407246207,"score_gpt":0.37744904164441245,"score_spread":0.25771693757195036,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3119978264","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09516007,0.00077373016,0.0011872277,0.9000432,0.0021529966,0.00030006055,0.000007573729,0.000017755345,0.00035739332],"genre_scores_gemma":[0.015379463,0.0003253838,0.0042398963,0.96900797,0.006034045,0.000006191043,0.00033402327,0.000047767055,0.0046252375],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9963332,0.0002625197,0.0019955665,0.00031823458,0.000877747,0.0002127786],"domain_scores_gemma":[0.9962651,0.0005143954,0.0015124603,0.00030299198,0.001109938,0.0002950998],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010385669,0.0002585585,0.0011657783,0.00026775573,0.00006829632,0.00007724405,0.00012254326,0.000883384,0.00020612439],"category_scores_gemma":[0.0018577172,0.00021028226,0.0004732176,0.0002689912,0.000075478885,0.00029578537,0.00003541724,0.0021162063,0.00010501911],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018811943,0.00009072906,0.005673939,0.00020810604,0.0006268227,0.0010508486,0.00025369655,0.000013626811,0.000031878288,0.000004071181,0.984199,0.007659166],"study_design_scores_gemma":[0.0029877229,0.0016394103,0.015692398,0.003130512,0.0017906342,0.0006130627,0.00008088693,0.00020812033,0.00025884013,0.0042716316,0.9690435,0.00028331135],"about_ca_topic_score_codex":0.000026856917,"about_ca_topic_score_gemma":0.0000061891574,"teacher_disagreement_score":0.0797806,"about_ca_system_score_codex":0.00015091915,"about_ca_system_score_gemma":0.0008530626,"threshold_uncertainty_score":0.9193981},"labels":[],"label_agreement":null},{"id":"W3120671396","doi":"10.1172/jci140903","title":"Disrupting the DREAM transcriptional repressor complex induces apolipoprotein overexpression and systemic amyloidosis in mice","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Amyloidosis: Diagnosis, Treatment, Outcomes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children’s Health Research Institute; University Health Network; University of Toronto; London Health Sciences Centre; Western University","funders":"Canadian Cancer Society Research Institute; Canadian Institutes of Health Research","keywords":"Amyloid (mycology); Laser capture microdissection; Amyloidosis; Biology; Repressor; Epigenetics; Cancer research; Molecular biology; Cell biology; Gene; Gene expression; Genetics; Pathology; Medicine","score_opus":0.07414205495502421,"score_gpt":0.3658063727677357,"score_spread":0.2916643178127115,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3120671396","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99458,0.0016298098,0.00009851338,0.0033065751,0.00016712921,0.00015147887,0.000010088888,0.0000036681176,0.000052736843],"genre_scores_gemma":[0.9956484,0.00096997956,0.0018901349,0.0009124603,0.00045991747,0.0000148281115,0.00003114025,0.000013780885,0.000059380352],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99759024,0.0006055875,0.0011392384,0.00026021103,0.00025876152,0.0001459562],"domain_scores_gemma":[0.9984169,0.00032453702,0.00075429777,0.00018993372,0.00018509776,0.00012924004],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011627469,0.00013878162,0.00033829108,0.000043840013,0.00008485176,0.000052033014,0.00015520878,0.00020282522,0.000013076576],"category_scores_gemma":[0.0018354194,0.00009742285,0.00018209456,0.00011116019,0.0001807223,0.000026483009,0.000067532324,0.00029847387,0.0000014525885],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008711193,0.00011538715,0.1565747,0.000036171507,0.00008640573,0.000011030478,0.00015024212,0.00009695825,0.8401291,0.00009577508,0.0003949493,0.0022221967],"study_design_scores_gemma":[0.002280183,0.00028857903,0.69841486,0.0006776899,0.0001072016,0.0002636924,0.0006233107,0.00018368094,0.2952485,0.00084943173,0.0008710004,0.00019182947],"about_ca_topic_score_codex":0.00003554899,"about_ca_topic_score_gemma":0.0000333496,"teacher_disagreement_score":0.54488057,"about_ca_system_score_codex":0.000024301808,"about_ca_system_score_gemma":0.00016523198,"threshold_uncertainty_score":0.39727885},"labels":[],"label_agreement":null},{"id":"W3122105450","doi":"10.1172/jci145837","title":"Dysregulation of the NRG1/ERBB pathway causes a developmental disorder with gastrointestinal dysmotility in humans","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Congenital gastrointestinal and neural anomalies","field":"Medicine","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Fondation pour la Recherche Médicale; Institut National de la Santé et de la Recherche Médicale; Institut des maladies génétiques Imagine; Agence Nationale de la Recherche; Canadian Centre for Applied Research in Cancer Control","keywords":"Biology; ErbB; Interstitial cell of Cajal; Enteric nervous system; Exome sequencing; Genetics; Pathology; Gene; Mutation; Immunology; Medicine; Endocrinology; Immunohistochemistry","score_opus":0.07000040456509847,"score_gpt":0.32276584853301066,"score_spread":0.2527654439679122,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3122105450","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969257,0.000049416918,0.00010620014,0.0025147684,0.00008058116,0.00011651371,0.0000026688087,0.0000052685386,0.0001988652],"genre_scores_gemma":[0.99135286,0.000005202319,0.0080003375,0.00025241676,0.00010548326,9.642035e-7,0.0000044174512,0.000007831807,0.00027048454],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979058,0.00020118966,0.0012330988,0.00014425945,0.0003933558,0.00012231072],"domain_scores_gemma":[0.99821925,0.00031619755,0.00066907186,0.00011525778,0.0005585694,0.00012168108],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00062018435,0.00011281606,0.00039684476,0.000055795066,0.0000382275,0.000012136662,0.00008103697,0.000039236824,0.00004692595],"category_scores_gemma":[0.0023630236,0.00006561243,0.00016366864,0.00030681383,0.00033740344,0.00015406491,0.000045651548,0.0004092903,0.0000014132856],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035100925,0.00024059038,0.98174864,0.000055055254,0.000019935938,0.000093217066,0.00011685956,0.000040127663,0.014725164,0.00012604769,0.00002268428,0.002460689],"study_design_scores_gemma":[0.0014083175,0.00084196724,0.9843353,0.0010468141,0.00005476466,0.0016537439,0.0003087916,0.000107532695,0.009392338,0.0007060582,0.00008777933,0.000056595854],"about_ca_topic_score_codex":0.000018809244,"about_ca_topic_score_gemma":0.00046914627,"teacher_disagreement_score":0.007894138,"about_ca_system_score_codex":0.00004221132,"about_ca_system_score_gemma":0.0007256458,"threshold_uncertainty_score":0.28289306},"labels":[],"label_agreement":null},{"id":"W3123021082","doi":"10.1172/jci136737","title":"CC17 group B Streptococcus exploits integrins for neonatal meningitis development","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Neonatal and Maternal Infections","field":"Medicine","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Université de Paris; Fonds d’Etudes et de Recherche du Corps Médical; Defence Research and Development Canada; Université Paris Descartes; Institut National de la Santé et de la Recherche Médicale; Agence Nationale de la Recherche","keywords":"Meningitis; Streptococcus; Streptococcus agalactiae; Group B; Exploit; Neonatal meningitis; Group (periodic table); Microbiology; Medicine; Computer science; Immunology; Biology; Genetics; Bacteria; Pediatrics; Internal medicine; Chemistry; Escherichia coli; Computer security; Gene","score_opus":0.11484675054097997,"score_gpt":0.39701400324078373,"score_spread":0.28216725269980375,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3123021082","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9833774,0.00018958605,0.012708093,0.0020411261,0.0012331046,0.00018630388,0.000006634346,0.000020187179,0.00023754894],"genre_scores_gemma":[0.93580186,0.00012089804,0.05995942,0.0011494447,0.0014572511,0.000026172527,0.00006951608,0.000023225235,0.0013922093],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980477,0.00006566418,0.0013132553,0.00015294408,0.00028176224,0.00013867948],"domain_scores_gemma":[0.99795574,0.00037396493,0.00054530584,0.00010677639,0.00068627484,0.00033194458],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007945531,0.00010616496,0.00040414324,0.00007939787,0.00007273531,0.0000317009,0.0000633555,0.000116315976,0.00009133182],"category_scores_gemma":[0.0017905132,0.0000839046,0.00027640964,0.00012574533,0.00008074947,0.00024193405,0.00003606732,0.00037912474,0.000016192655],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012200343,0.0013555639,0.24528518,0.00063966966,0.0013602907,0.0011074849,0.0014314932,0.00006633844,0.04474412,0.008858897,0.016357468,0.67757344],"study_design_scores_gemma":[0.008509784,0.0024626122,0.32922855,0.0016407043,0.00041141442,0.0018742818,0.000544447,0.0002457695,0.26752532,0.013114326,0.37408504,0.00035778238],"about_ca_topic_score_codex":0.0000044790627,"about_ca_topic_score_gemma":0.000022364706,"teacher_disagreement_score":0.6772157,"about_ca_system_score_codex":0.000058491696,"about_ca_system_score_gemma":0.00054746354,"threshold_uncertainty_score":0.342153},"labels":[],"label_agreement":null},{"id":"W3123153443","doi":"10.1172/jci138267","title":"Impaired complex I repair causes recessive Leber’s hereditary optic neuropathy","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":151,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"Lomonosov Moscow State University; Università di Bologna; Cardio-Pulmonary Institute; Ministero della Salute; E-Rare; Austrian Science Fund; Bundesministerium für Bildung und Forschung; National Institute for Health and Care Research; Deutsche Forschungsgemeinschaft","keywords":"Medicine; Leber's hereditary optic neuropathy; Optic neuropathy; Genetics; Biology; Ophthalmology; Optic nerve","score_opus":0.09276138396998931,"score_gpt":0.36040034471470017,"score_spread":0.26763896074471083,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3123153443","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937711,0.00041987217,0.0007342978,0.0016336653,0.00300924,0.000060521783,0.0000067076,0.000012155262,0.00035244078],"genre_scores_gemma":[0.96095026,0.00063195307,0.022675809,0.007324371,0.0068929866,0.0000036958593,0.00019121551,0.000034512024,0.0012952036],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99764913,0.0007238432,0.0010831879,0.00023426673,0.00018051575,0.00012907422],"domain_scores_gemma":[0.99813145,0.00015197857,0.0006632115,0.00024418026,0.00058407127,0.00022512191],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007808614,0.000111958005,0.00031774386,0.000037518676,0.00005839725,0.000019513966,0.00011361297,0.00022241728,0.00011559856],"category_scores_gemma":[0.0047216546,0.000098495046,0.00034050594,0.00011381667,0.00016469587,0.0000131386305,0.000057375713,0.00029497917,0.000016052485],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00064264174,0.00026422736,0.053188782,0.000044465294,0.00023700621,0.0009544294,0.0001058212,0.0003475702,0.7791589,0.00023236923,0.16252145,0.002302347],"study_design_scores_gemma":[0.0075900718,0.008137045,0.3677036,0.00027232923,0.00055020815,0.0076211393,0.0006483428,0.0013650039,0.2539851,0.0045300582,0.34664515,0.00095194846],"about_ca_topic_score_codex":0.0000029529344,"about_ca_topic_score_gemma":0.000016361824,"teacher_disagreement_score":0.5251738,"about_ca_system_score_codex":0.00000832776,"about_ca_system_score_gemma":0.00042563924,"threshold_uncertainty_score":0.5652603},"labels":[],"label_agreement":null},{"id":"W3123875011","doi":"10.1172/jci129433","title":"17β-estradiol and estrogen receptor α protect right ventricular function in pulmonary hypertension via BMPR2 and apelin","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Apelin-related biomedical research","field":"Medicine","cited_by":115,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut universitaire de cardiologie et de pneumologie de Québec","funders":"Actelion Pharmaceuticals; National Center for Advancing Translational Sciences; University of California, San Diego; National Institutes of Health; National Heart, Lung, and Blood Institute; Heart and Stroke Foundation of Canada; U.S. Department of Defense; American Lung Association; Eli Lilly and Company; American Heart Association; Canadian Institutes of Health Research; School of Medicine, Indiana University; U.S. Department of Veterans Affairs","keywords":"Apelin; BMPR2; Internal medicine; Endocrinology; Agonist; Downregulation and upregulation; Pulmonary hypertension; Estrogen receptor; Receptor; Estrogen; Medicine; Biology; Bone morphogenetic protein","score_opus":0.06334375995272004,"score_gpt":0.35174768297916925,"score_spread":0.28840392302644924,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3123875011","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98807865,0.0024757788,0.00042103013,0.008440358,0.0002554252,0.00028379716,0.0000014025444,0.000009805768,0.00003373058],"genre_scores_gemma":[0.9938159,0.0012299701,0.003336545,0.0007929784,0.00068119506,0.000004180532,0.00002971474,0.000017005867,0.00009253181],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9971576,0.00044238454,0.0013060546,0.00026649816,0.0006351296,0.00019235568],"domain_scores_gemma":[0.9978949,0.0005436852,0.00040003317,0.00013635763,0.00042722718,0.0005978246],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024689834,0.0001244356,0.00051561603,0.00017969855,0.0000490899,0.000024842519,0.000051217936,0.00038520896,0.00009898416],"category_scores_gemma":[0.004969539,0.000091109614,0.00012068469,0.00041876425,0.00029594186,0.00019641999,0.0000461121,0.0011991027,0.000011264535],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00278585,0.0012232839,0.4292011,0.0004150839,0.00036579024,0.00964508,0.00008241816,0.00001850912,0.29298115,0.00013656527,0.0025138266,0.26063135],"study_design_scores_gemma":[0.005730083,0.0024772948,0.94669753,0.0014308494,0.00034513653,0.0054830937,0.000092954324,0.012880927,0.009485927,0.0059937774,0.009156153,0.00022625898],"about_ca_topic_score_codex":0.00001102835,"about_ca_topic_score_gemma":0.0000012040427,"teacher_disagreement_score":0.51749647,"about_ca_system_score_codex":0.000056483554,"about_ca_system_score_gemma":0.0004673269,"threshold_uncertainty_score":0.59493613},"labels":[],"label_agreement":null},{"id":"W3124533070","doi":"10.1172/jci140590","title":"Early T follicular helper cell activity accelerates hepatitis C virus-specific B cell expansion","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"National Center for Research Resources; National Institute of Allergy and Infectious Diseases; Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Center for AIDS Research, University of Washington; Alberta Innovates; Styrelsen för Internationellt Utvecklingssamarbete; Public Health Agency; Yerkes National Primate Research Center, Emory University; National Institutes of Health; American Liver Foundation; Public Health Agency of Canada; Université de Montréal; Emory University","keywords":"Virology; Cell; Virus; Biology; Follicular phase; Immunology; Genetics","score_opus":0.057182549782053595,"score_gpt":0.30906102829874704,"score_spread":0.2518784785166934,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3124533070","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9877105,0.0019636182,0.0008327391,0.00059176376,0.007858432,0.000081709615,0.0000024381873,0.000021162201,0.00093764643],"genre_scores_gemma":[0.989304,0.002969843,0.00038252078,0.0006619591,0.0003323283,0.0000025793317,0.000040081024,0.000018653463,0.0062880316],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973455,0.00088665105,0.0012164515,0.00024303903,0.00011238709,0.00019596276],"domain_scores_gemma":[0.9975125,0.00046578408,0.0010449551,0.00023427892,0.00066559226,0.0000768488],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00088674086,0.00016612253,0.00046948937,0.00010411393,0.00015851135,0.00006707568,0.00013919428,0.0004073802,0.001422085],"category_scores_gemma":[0.00037705724,0.00014408081,0.0004045902,0.00019181379,0.00014310381,0.00063105184,0.000046461362,0.0009907967,0.00062319596],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026735323,0.00036358365,0.013097021,0.000013473225,0.00005937961,0.000022379154,0.00017001285,0.00001555502,0.9540075,0.00002356553,0.027708877,0.0042513004],"study_design_scores_gemma":[0.0014427014,0.00047736327,0.10722834,0.00005661539,0.000050883034,0.00005563611,0.0000714512,0.000015851592,0.8165317,0.00016528736,0.07377053,0.00013363585],"about_ca_topic_score_codex":0.00007730233,"about_ca_topic_score_gemma":0.0000118968255,"teacher_disagreement_score":0.13747579,"about_ca_system_score_codex":0.00004997951,"about_ca_system_score_gemma":0.00022123598,"threshold_uncertainty_score":0.99949074},"labels":[],"label_agreement":null},{"id":"W3126232165","doi":"10.1172/jci143011","title":"Residual β cell function in long-term type 1 diabetes associates with reduced incidence of hypoglycemia","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Diabetes and associated disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":83,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; Public Health Ontario; University of Toronto","funders":"Division of Diabetes, Endocrinology, and Metabolic Diseases; National Eye Institute; National Institute of Diabetes and Digestive and Kidney Diseases; Abbott Diabetes Care; National Institutes of Health; Eli Lilly and Company; Nipro; Insulet Corporation; Sanofi; Roche Diabetes Care","keywords":"Medicine; Hypoglycemia; Type 1 diabetes; Diabetes mellitus; Internal medicine; C-peptide; Incidence (geometry); Endocrinology; Type 2 diabetes; Gastroenterology; Meal","score_opus":0.02216269324971504,"score_gpt":0.3022768704062816,"score_spread":0.28011417715656656,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3126232165","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984264,0.00087092514,0.000015283387,0.000295001,0.00023006895,0.000041711162,0.0000023144328,0.0000018776566,0.00011643044],"genre_scores_gemma":[0.9985804,0.00032479377,0.00045636637,0.00028318848,0.0001935561,8.1410195e-7,0.000048255413,0.0000100946845,0.00010251438],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985317,0.00021816,0.00076745,0.00014591905,0.0002065452,0.00013022494],"domain_scores_gemma":[0.9982795,0.00012772989,0.00088097464,0.000111979934,0.000517991,0.00008181838],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00085297384,0.00008424112,0.00027683444,0.000040716888,0.000019148925,0.000016739996,0.00009245425,0.00019600433,0.0000102503045],"category_scores_gemma":[0.0016735484,0.00007182686,0.00009249061,0.0002043301,0.000093469054,0.000017561935,0.000030986637,0.0002205137,0.0000012940486],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013073205,0.00010993153,0.79264885,0.000020814652,0.000059161706,0.000004048824,0.000016393915,0.00012280453,0.20543388,0.0000042959505,0.00046838043,0.000980698],"study_design_scores_gemma":[0.0011016842,0.0010373674,0.74845934,0.0001405403,0.00006166246,9.3869625e-7,0.000056382116,0.000015735535,0.24859987,0.00039607036,0.000047232887,0.000083139515],"about_ca_topic_score_codex":0.0000029557252,"about_ca_topic_score_gemma":0.000048185604,"teacher_disagreement_score":0.044189494,"about_ca_system_score_codex":0.000014184859,"about_ca_system_score_gemma":0.00043580282,"threshold_uncertainty_score":0.29290143},"labels":[],"label_agreement":null},{"id":"W3127215208","doi":"10.1172/jci140105","title":"RNF168 regulates R-loop resolution and genomic stability in BRCA1/2-deficient tumors","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Tech University; Hôpital Maisonneuve-Rosemont; Toronto General Hospital; University Health Network; University of Toronto; Princess Margaret Cancer Centre","funders":"Instituto de Salud Carlos III; Agència de Gestió d'Ajuts Universitaris i de Recerca; Canadian Institutes of Health Research; Ministero dello Sviluppo Economico; National Cancer Institute; University of Toronto; Cancer Research UK; Centres de Recerca de Catalunya; Government of Canada; Government of Ontario; Generalitat de Catalunya; Ministère du Développement Économique, de l’Innovation et de l’Exportation; European Regional Development Fund; European Commission; U.S. Department of Defense; Breast Cancer Research Foundation; Princess Margaret Cancer Foundation; Genome Canada; Fondation du cancer du sein du Québec; National Institutes of Health; Terry Fox Foundation; Ovarian Cancer Research Fund","keywords":"Genome instability; Biology; DNA damage; Carcinogenesis; DNA repair; Cancer research; Mitotic catastrophe; Genetics; Mutation; Mutagenesis; Cancer; DNA; Gene","score_opus":0.05132680537967718,"score_gpt":0.32501691343304573,"score_spread":0.2736901080533686,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3127215208","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979383,0.00073275744,0.00023227408,0.00070365774,0.0002445918,0.000065789995,0.0000020554146,0.0000031463555,0.00007743833],"genre_scores_gemma":[0.9946357,0.00019810146,0.0045222784,0.00033550517,0.00020965797,0.0000011747984,0.000013286587,0.000008583749,0.000075689306],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981416,0.00037485472,0.0009819568,0.00022175352,0.00016131676,0.00011851634],"domain_scores_gemma":[0.9989122,0.00008475327,0.00044606233,0.0001895818,0.00023242629,0.00013496567],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022560372,0.00008121636,0.00023385501,0.000038800383,0.000028180979,0.000021653681,0.00007906781,0.00016816417,0.000012343013],"category_scores_gemma":[0.0025816655,0.00007599072,0.000107119835,0.00009570322,0.0001419197,0.000011042918,0.00007581697,0.00021673243,0.0000015199182],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011185347,0.0001002746,0.05707923,0.000021300457,0.000020670546,0.000017884726,0.000053159147,0.00023158219,0.939816,0.00024911374,0.00020715482,0.0020917964],"study_design_scores_gemma":[0.0011993868,0.0005650372,0.3136343,0.000095244235,0.000028399889,0.000114105365,0.0001718341,0.0013904775,0.67486775,0.0068458114,0.00094832905,0.000139324],"about_ca_topic_score_codex":0.000006070643,"about_ca_topic_score_gemma":0.000031141488,"teacher_disagreement_score":0.26494822,"about_ca_system_score_codex":0.000028710281,"about_ca_system_score_gemma":0.0003279924,"threshold_uncertainty_score":0.30988118},"labels":[],"label_agreement":null},{"id":"W3129175901","doi":"10.1172/jci142677","title":"Inhibition of relaxin autocrine signaling confers therapeutic vulnerability in ovarian cancer","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pregnancy-related medical research","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; Université de Montréal; University Health Network; University of Toronto; Princess Margaret Cancer Centre; Centre Hospitalier de l’Université de Montréal; Institute for Research in Immunology and Cancer","funders":"Princess Margaret Cancer Foundation; Canadian Institutes of Health Research; Cancer Research Society","keywords":"Autocrine signalling; Relaxin; Cancer research; Ovarian cancer; Cell growth; Biology; Signal transduction; Internal medicine; Cell culture; Cancer; Medicine; Endocrinology; Cell biology; Hormone","score_opus":0.17688710473950423,"score_gpt":0.46605408349202393,"score_spread":0.28916697875251973,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3129175901","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9845455,0.0019909306,0.0010691937,0.01147001,0.00035136042,0.00020202146,0.0000023013906,0.0000074390155,0.000361241],"genre_scores_gemma":[0.9953404,0.0012902073,0.0019850773,0.0009839893,0.00026935595,0.00000528209,0.000008112861,0.000012806571,0.00010478995],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99585116,0.0007812394,0.0021883766,0.0001918875,0.000793554,0.00019380415],"domain_scores_gemma":[0.99630475,0.0013030055,0.0007578977,0.0002034505,0.0010342645,0.00039662363],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0047338945,0.0000994876,0.00066274696,0.00015849424,0.000023173257,0.000009853649,0.000073367104,0.00026346344,0.0003674595],"category_scores_gemma":[0.015522009,0.00008029272,0.00022175451,0.00051902,0.00035497063,0.00017606736,0.00003271541,0.0015972046,0.0000035793632],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015318292,0.0012626284,0.42445406,0.00065448275,0.00039221585,0.00071823277,0.000812499,0.00067052495,0.46637297,0.0022180441,0.00036813313,0.10054437],"study_design_scores_gemma":[0.012530666,0.0015763779,0.5968646,0.01682972,0.00035576773,0.00012323483,0.00032718104,0.0043211924,0.3271016,0.039314114,0.0004489597,0.00020661576],"about_ca_topic_score_codex":0.000053232623,"about_ca_topic_score_gemma":0.000026840558,"teacher_disagreement_score":0.17241052,"about_ca_system_score_codex":0.00015035374,"about_ca_system_score_gemma":0.0027313353,"threshold_uncertainty_score":0.9927707},"labels":[],"label_agreement":null},{"id":"W3130957201","doi":"10.1172/jci126299","title":"Aberrant AZIN2 and polyamine metabolism precipitates tau neuropathology","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Polyamine Metabolism and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"National Institute on Aging; Morsani College of Medicine; CurePSP; Florida Department of Health; BrightFocus Foundation; Alzheimer's Association","keywords":"Tauopathy; Polyamine; Neuroscience; Neuropathology; Tau protein; Ornithine decarboxylase antizyme; Biology; Cell biology; Hyperphosphorylation; Ornithine decarboxylase; Alzheimer's disease; Biochemistry; Neurodegeneration; Internal medicine; Medicine; Disease; Phosphorylation; Enzyme","score_opus":0.039259690142602624,"score_gpt":0.3446256645106422,"score_spread":0.3053659743680396,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3130957201","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99113095,0.004286794,0.0011489955,0.0027236135,0.00048365636,0.000051933777,0.000009879845,0.000003654791,0.00016052561],"genre_scores_gemma":[0.9863157,0.0025629012,0.0073250635,0.0017714004,0.0014305856,0.0000036413437,0.000041184718,0.000014568531,0.0005349168],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984762,0.00027623997,0.00081071345,0.00019683408,0.00011991712,0.00012011473],"domain_scores_gemma":[0.99875885,0.000099096564,0.0004679593,0.00019539434,0.00028738333,0.00019130032],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007302659,0.00009812896,0.0002981188,0.000036928195,0.000045392833,0.000023506624,0.00010960488,0.0001312132,0.000009544791],"category_scores_gemma":[0.0018792903,0.00008252002,0.00012644229,0.00010202082,0.00021430136,0.000012148568,0.00007194506,0.00019963353,0.000003838851],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009603559,0.00012934732,0.014838591,0.000012056474,0.00007109838,0.000022428316,0.000053671105,0.000016113116,0.96181464,0.0013902666,0.0036143088,0.017941443],"study_design_scores_gemma":[0.0029651986,0.000345937,0.56490684,0.000025850031,0.00021450355,0.00059516734,0.00006137963,0.00010620303,0.305942,0.0066213156,0.1179979,0.00021771187],"about_ca_topic_score_codex":0.0000021146852,"about_ca_topic_score_gemma":0.0000044814687,"teacher_disagreement_score":0.65587264,"about_ca_system_score_codex":0.0000015859812,"about_ca_system_score_gemma":0.00016877116,"threshold_uncertainty_score":0.33650687},"labels":[],"label_agreement":null},{"id":"W3132473646","doi":"10.1172/jci145853","title":"Identification of SARS-CoV-2–specific immune alterations in acutely ill patients","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"COVID-19 Clinical Research Studies","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; McGill University; Centre Hospitalier de l’Université de Montréal","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Public Health Agency of Canada; Government of Canada; Génome Québec; Public Health Agency","keywords":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Sars virus; Immune system; Coronavirus disease 2019 (COVID-19); Identification (biology); Medicine; Virology; 2019-20 coronavirus outbreak; Betacoronavirus; Immunology; Biology; Pathology; Infectious disease (medical specialty); Outbreak; Disease","score_opus":0.21838555335302123,"score_gpt":0.5037628925394119,"score_spread":0.28537733918639063,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3132473646","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9857459,0.00022642511,0.000816893,0.012335142,0.00055214553,0.00021979131,0.00000879073,0.0000063386574,0.000088540626],"genre_scores_gemma":[0.9948286,0.0012386834,0.0016075623,0.0018289689,0.00030746622,0.0000047035696,0.000026261792,0.000012449691,0.00014529427],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.994219,0.0004813522,0.0040937387,0.00022722456,0.00081263715,0.00016605572],"domain_scores_gemma":[0.9873075,0.0050961906,0.0019361988,0.00040245283,0.005070052,0.00018764402],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0035751392,0.000111563015,0.00076315016,0.00022969504,0.000045282526,0.000026969774,0.00014491154,0.00015577044,0.0000228277],"category_scores_gemma":[0.12502146,0.0000940451,0.00036658644,0.00061377324,0.0003369469,0.00030120322,0.00007857849,0.0007180623,0.00001877941],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011192611,0.0029827133,0.5787699,0.00041837,0.00037259117,0.00011923163,0.00073945674,0.0001849653,0.38153055,0.0009756567,0.005618778,0.027168471],"study_design_scores_gemma":[0.0034193043,0.0006541848,0.88427037,0.0004678768,0.000088059685,0.0000033936085,0.00006151698,0.0007215549,0.1038663,0.0034807858,0.0028803032,0.00008635898],"about_ca_topic_score_codex":0.000011989005,"about_ca_topic_score_gemma":0.000010004654,"teacher_disagreement_score":0.30550042,"about_ca_system_score_codex":0.000106731946,"about_ca_system_score_gemma":0.0007748585,"threshold_uncertainty_score":0.88234884},"labels":[],"label_agreement":null},{"id":"W3133720646","doi":"10.1172/jci140752","title":"Inhibiting the MNK1/2-eIF4E axis impairs melanoma phenotype switching and potentiates antitumor immune responses","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"CAR-T cell therapy research","field":"Medicine","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Hôpital Maisonneuve-Rosemont; McGill University; Jewish General Hospital","funders":"Terry Fox Research Institute; Canadian Institutes of Health Research; H2020 European Research Council; Réseau de cancérologie Rossy; Narodowe Centrum Badań i Rozwoju; McGill University","keywords":"Melanoma; Cancer research; Immunotherapy; CD8; EIF4E; Immune system; Immune checkpoint; Phenotype; Tumor microenvironment; Immunology; Biology; Medicine; Gene","score_opus":0.08551406362731641,"score_gpt":0.39733535910964496,"score_spread":0.31182129548232856,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3133720646","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98136353,0.002087002,0.00010746988,0.015678626,0.0003076076,0.00013783872,0.0000013227701,0.000012979648,0.00030359143],"genre_scores_gemma":[0.9945776,0.0006216142,0.0021504,0.0009816135,0.0008936422,0.0000013218217,0.000004462829,0.000021870022,0.0007475062],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99688846,0.0007315324,0.0014230477,0.00018376934,0.00056772394,0.00020549398],"domain_scores_gemma":[0.99598545,0.0021606353,0.00071011,0.00023285064,0.00064222637,0.00026871735],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0055084815,0.00012178958,0.0005117523,0.000111207206,0.0001653282,0.000109075,0.00011090198,0.00011953251,0.00025811125],"category_scores_gemma":[0.010339362,0.000079758276,0.000264001,0.00030142433,0.00025521105,0.00022637862,0.000089982816,0.0009999961,0.000008532199],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013871335,0.00012635664,0.25555092,0.00008519722,0.0002761042,0.00034168852,0.0006398038,0.00000918706,0.7014446,0.00024255482,0.00035946866,0.03953694],"study_design_scores_gemma":[0.0033035008,0.0011595499,0.86395115,0.00079060905,0.00024666876,0.0014292594,0.0011296758,0.0009486041,0.12090394,0.0042147296,0.0017720123,0.00015028671],"about_ca_topic_score_codex":0.000026719383,"about_ca_topic_score_gemma":0.000008582694,"teacher_disagreement_score":0.6084002,"about_ca_system_score_codex":0.000038434504,"about_ca_system_score_gemma":0.00064658833,"threshold_uncertainty_score":0.997997},"labels":[],"label_agreement":null},{"id":"W3134525970","doi":"10.1172/jci142148","title":"Biallelic loss-of-function variants in PLD1 cause congenital right-sided cardiac valve defects and neonatal cardiomyopathy","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Congenital heart defects research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women's Health Research Institute","funders":"National Institute of General Medical Sciences; National Heart, Lung, and Blood Institute; Universitair Medisch Centrum Groningen; Ministerstvo Zdravotnictví Ceské Republiky; Ospedale Pediatrico Bambino Gesù; Ochsner Health; National Institutes of Health; Rijksuniversiteit Groningen; Hebrew University of Jerusalem; Amsterdam University Medical Centers; Univerzita Karlova v Praze; National Science Foundation; Hartstichting; University of Minnesota; Children's Hospital of Pittsburgh; Children's Heart Foundation; Leids Universitair Medisch Centrum; Universiteit Leiden","keywords":"Missense mutation; Phenotype; Cardiomyopathy; Exome sequencing; Heart disease; Biology; Internal medicine; Genetics; Medicine; Heart failure; Gene","score_opus":0.04665967952419232,"score_gpt":0.3509799135232749,"score_spread":0.3043202339990826,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3134525970","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961895,0.0026064275,0.00016244019,0.00011826394,0.0006266903,0.00013304046,0.000013781392,0.0000026068508,0.00014726957],"genre_scores_gemma":[0.9982054,0.0006175876,0.00039754555,0.000087962275,0.00056806725,0.0000029154576,0.000035402463,0.000015298441,0.00006982341],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997631,0.00063754414,0.0009537882,0.00025784038,0.00033922933,0.00018057352],"domain_scores_gemma":[0.9983007,0.00033240468,0.00032611057,0.00021828117,0.0005834974,0.00023906438],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001468444,0.00012483013,0.0004440266,0.00011145709,0.000036254587,0.000031602493,0.000092330425,0.00026444637,0.000013206626],"category_scores_gemma":[0.0030039847,0.000116619776,0.00035276564,0.00022309143,0.000230286,0.000029011782,0.00011487809,0.00037028652,0.0000038152325],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007720145,0.00015770622,0.6156098,0.00010367581,0.0007394432,0.0004094745,0.00014050986,0.00007991339,0.3666692,0.00023198518,0.0004925364,0.014593719],"study_design_scores_gemma":[0.0033888856,0.0017397798,0.8070405,0.00015913349,0.0002887619,0.00037123542,0.00011667263,0.00014946304,0.18187875,0.0020919451,0.0024837705,0.00029107236],"about_ca_topic_score_codex":0.000021271939,"about_ca_topic_score_gemma":0.000106523126,"teacher_disagreement_score":0.19143073,"about_ca_system_score_codex":0.00001990334,"about_ca_system_score_gemma":0.0006303838,"threshold_uncertainty_score":0.47556165},"labels":[],"label_agreement":null},{"id":"W3134797872","doi":"10.1172/jci146614","title":"HLA class I–associated expansion of TRBV11-2 T cells in multisystem inflammatory syndrome in children","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Kawasaki Disease and Coronary Complications","field":"Medicine","cited_by":192,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"National Institute of General Medical Sciences; National Institutes of Health; National Institute of Allergy and Infectious Diseases; Cedars-Sinai Medical Center; Foundation for the National Institutes of Health","keywords":"Superantigen; T-cell receptor; Biology; Immunology; Complementarity determining region; T cell; Immune system; Immunoglobulin light chain; Antibody","score_opus":0.04875685803445712,"score_gpt":0.34429199247103515,"score_spread":0.29553513443657803,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3134797872","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982347,0.00027647192,0.000024126435,0.0009925462,0.00016193198,0.00020292333,0.0000064403907,0.0000074272484,0.00009341453],"genre_scores_gemma":[0.99886906,0.00013620124,0.00045134086,0.00034251914,0.00008757249,0.0000043263935,0.0000304821,0.000011794162,0.0000667123],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9967233,0.00045325136,0.0021738992,0.00015951348,0.00036401223,0.00012602525],"domain_scores_gemma":[0.99782366,0.00036626306,0.0009948502,0.00021386314,0.00038107243,0.00022027358],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011861284,0.00009818763,0.0006184821,0.00020106872,0.00001655203,0.000007497709,0.00009610632,0.0001888599,0.000026125328],"category_scores_gemma":[0.0012516269,0.00009026242,0.00022005176,0.00042314068,0.00008792822,0.0001738459,0.000027682496,0.00047384875,0.000008170175],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000095318064,0.00048386783,0.98565155,0.000055491953,0.00006920385,0.00018428254,0.0000986129,0.00024124456,0.011706428,0.00010314901,0.00019299747,0.0011178221],"study_design_scores_gemma":[0.003123323,0.0002513205,0.99024314,0.0011633764,0.000086016786,0.00015775644,0.00010290414,0.0010639005,0.003153235,0.0005490268,0.000032599146,0.00007342633],"about_ca_topic_score_codex":0.000017962046,"about_ca_topic_score_gemma":0.00002992431,"teacher_disagreement_score":0.008553192,"about_ca_system_score_codex":0.00009022455,"about_ca_system_score_gemma":0.00082674023,"threshold_uncertainty_score":0.36807948},"labels":[],"label_agreement":null},{"id":"W3135211510","doi":"10.1172/jci94229","title":"Macrophage SR-BI modulates autophagy via VPS34 complex and PPARα transcription of Tfeb in atherosclerosis","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Thrombosis and Atherosclerosis Research Institute","funders":"Vanderbilt University; National Eye Institute; National Institutes of Health; National Cancer Institute; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute","keywords":"Autophagy; TFEB; Cell biology; Basic helix-loop-helix leucine zipper transcription factors; Lysosome; Foam cell; Transcription factor; Biology; Inflammation; Macrophage; Downregulation and upregulation; Apoptosis; Chemistry; Immunology; Biochemistry; Gene; DNA-binding protein","score_opus":0.10494296268656822,"score_gpt":0.37810959072109723,"score_spread":0.273166628034529,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3135211510","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99634206,0.0013290088,0.00053089554,0.0013626253,0.00023714802,0.000111721274,0.0000055194896,0.000008806724,0.00007219881],"genre_scores_gemma":[0.99424744,0.0013477855,0.003002026,0.0010609251,0.00024184,0.0000015820276,0.000014500721,0.000015277616,0.00006863522],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9976034,0.0002669078,0.0015243256,0.0001641667,0.00031374034,0.00012746984],"domain_scores_gemma":[0.99846005,0.00023143961,0.00062688347,0.00015482854,0.000272435,0.00025437024],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009232342,0.000117890064,0.0006421413,0.00010356627,0.000027840231,0.000014050791,0.0000633247,0.00017586877,0.0002001114],"category_scores_gemma":[0.0004232001,0.00010072505,0.00023734388,0.00022596109,0.00023926863,0.00018830232,0.000013183658,0.00035724667,0.0000030707781],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00051651115,0.000683604,0.16252518,0.00018449826,0.0001982352,0.00011061002,0.00058081915,0.000101181045,0.8118055,0.0003496106,0.0001978747,0.022746388],"study_design_scores_gemma":[0.0037777785,0.00053650374,0.87714106,0.00034642656,0.00014228075,0.00006470837,0.00005837492,0.0033385954,0.10800855,0.00633983,0.000167285,0.00007860535],"about_ca_topic_score_codex":0.000011661533,"about_ca_topic_score_gemma":0.000005391796,"teacher_disagreement_score":0.7146159,"about_ca_system_score_codex":0.000027868457,"about_ca_system_score_gemma":0.00020984715,"threshold_uncertainty_score":0.41074485},"labels":[],"label_agreement":null},{"id":"W3135521810","doi":"10.1172/jci146821","title":"YAP/TFEB pathway promotes autophagic cell death and hypertrophic cardiomyopathy in lysosomal storage diseases","year":2021,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Boniface Hospital","funders":"Canadian Institutes of Health Research","keywords":"TFEB; Autophagy; Lysosome; Cell biology; Basic helix-loop-helix leucine zipper transcription factors; Transcription factor; Biology; Programmed cell death; Biochemistry; Enzyme; Gene; Apoptosis","score_opus":0.05679981380302977,"score_gpt":0.3237844179697605,"score_spread":0.2669846041667307,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3135521810","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.89413226,0.009714957,0.000020953848,0.09465659,0.00090432446,0.0003573769,0.000038381844,0.000025238247,0.0001498943],"genre_scores_gemma":[0.72943395,0.0022724583,0.0013286795,0.25141898,0.014130501,0.000019616153,0.00029881235,0.000104417035,0.0009925907],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99536085,0.0008619049,0.0021350516,0.00047064485,0.0008416699,0.00032987603],"domain_scores_gemma":[0.99645114,0.0007465403,0.0014477179,0.0004130808,0.00043354052,0.00050796085],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0009396906,0.00039744226,0.001742923,0.000333523,0.000058069465,0.0000756517,0.00018349681,0.00095668837,0.00008135472],"category_scores_gemma":[0.0014223106,0.00031509378,0.00074089784,0.00024818085,0.00028515956,0.00023882107,0.000060099665,0.0030563707,0.0000088808965],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014119823,0.0021584674,0.6413486,0.004159386,0.0017686744,0.101795785,0.0007113231,0.000101428646,0.0053432584,0.00009660182,0.2274856,0.013618894],"study_design_scores_gemma":[0.013158608,0.0040491996,0.84574085,0.00508025,0.003073381,0.0016977956,0.00008993986,0.0014108212,0.0032770971,0.010231724,0.111048594,0.0011417171],"about_ca_topic_score_codex":0.000010395902,"about_ca_topic_score_gemma":7.477389e-7,"teacher_disagreement_score":0.20439227,"about_ca_system_score_codex":0.000106447456,"about_ca_system_score_gemma":0.0016990246,"threshold_uncertainty_score":0.99993014},"labels":[],"label_agreement":null},{"id":"W3139636803","doi":"10.1172/jci140709","title":"UDP-glucose and P2Y14 receptor amplify allergen-induced airway eosinophilia","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Asthma and respiratory diseases","field":"Medicine","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institutes of Health; National Institute of Environmental Health Sciences; National Institute of Allergy and Infectious Diseases; Uniwersytet Jagielloński Collegium Medicum","keywords":"Eosinophilia; Eosinophil; Immunology; Asthma; Ovalbumin; Medicine; Airway; Allergen; Sensitization; Pulmonary Eosinophilia; Allergy; Antigen; Anesthesia","score_opus":0.08356922333767017,"score_gpt":0.38056367557806503,"score_spread":0.2969944522403949,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3139636803","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99100006,0.0014379106,0.000056749253,0.0062683965,0.00083202025,0.00009001728,0.000003545432,0.000013721264,0.00029758655],"genre_scores_gemma":[0.98973584,0.0011917019,0.0024878057,0.004245363,0.0019690886,0.000001552832,0.000015283116,0.000019640522,0.00033374105],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99771917,0.00029386845,0.00127264,0.00018972109,0.00038630603,0.00013832147],"domain_scores_gemma":[0.99757254,0.00034374543,0.00062556,0.00017906296,0.0005509632,0.0007281392],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009108916,0.00012247483,0.0005150262,0.0000782945,0.0000646204,0.000029003753,0.000060085866,0.00022717711,0.00025584537],"category_scores_gemma":[0.0038674148,0.00009255302,0.00023136508,0.00017328879,0.00016929419,0.00017431255,0.000033144555,0.0005423969,0.000034719327],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013283291,0.001355983,0.37922212,0.00033355158,0.0005550984,0.0007973104,0.00045614247,0.000020322359,0.30704436,0.00067145407,0.048836596,0.25937873],"study_design_scores_gemma":[0.005780654,0.0028034982,0.7645434,0.0008517053,0.00047198255,0.00037632664,0.0003981059,0.00017931726,0.069321156,0.0016838718,0.15327777,0.00031223116],"about_ca_topic_score_codex":0.0000020084074,"about_ca_topic_score_gemma":0.000002613293,"teacher_disagreement_score":0.38532126,"about_ca_system_score_codex":0.000023626133,"about_ca_system_score_gemma":0.0007677338,"threshold_uncertainty_score":0.46299362},"labels":[],"label_agreement":null},{"id":"W3154437481","doi":"10.1172/jci143990","title":"The 5α-reductase inhibitor finasteride reduces opioid self-administration in animal models of opioid use disorder","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Hormonal and reproductive studies","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Center for Advancing Translational Sciences; National Human Genome Research Institute; National Institute on Drug Abuse; National Heart, Lung, and Blood Institute; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Finasteride; Opioid; Medicine; Dehydroepiandrosterone sulfate; Opioid use disorder; Pharmacology; Hyperalgesia; Internal medicine; Endocrinology; Nociception; Androgen; Receptor","score_opus":0.09467827892443573,"score_gpt":0.37458366257219483,"score_spread":0.2799053836477591,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3154437481","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98885554,0.0014773111,0.000031010954,0.008920173,0.00047582877,0.00014771122,0.0000045173183,0.000005728823,0.000082197286],"genre_scores_gemma":[0.9934648,0.0018050439,0.0035175027,0.00013730596,0.00091809046,0.0000034463008,0.000007783928,0.000009516371,0.00013648631],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99735904,0.00025716692,0.0016601819,0.00019245932,0.00040118812,0.0001299683],"domain_scores_gemma":[0.9974922,0.0005416108,0.0008086326,0.00016651982,0.00085669226,0.00013436838],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013926195,0.00011348084,0.00048814507,0.0000614391,0.0000755624,0.000030639203,0.00007182237,0.0000991605,0.0000041912363],"category_scores_gemma":[0.0038856359,0.000070245114,0.0001949435,0.00024690913,0.00032245452,0.00039000044,0.000044361223,0.00043136062,0.0000013499202],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010281618,0.005553247,0.5040884,0.00074654305,0.0013899832,0.00065753696,0.009140074,0.00071407866,0.4023769,0.0057700532,0.0066813,0.052600306],"study_design_scores_gemma":[0.0029051472,0.0032833384,0.80778164,0.0007709291,0.0002962531,0.00023070995,0.0025271052,0.0013191568,0.16496606,0.012681453,0.003032132,0.00020609994],"about_ca_topic_score_codex":0.000009809174,"about_ca_topic_score_gemma":0.0000244576,"teacher_disagreement_score":0.30369323,"about_ca_system_score_codex":0.00003106504,"about_ca_system_score_gemma":0.00089180033,"threshold_uncertainty_score":0.46517497},"labels":[],"label_agreement":null},{"id":"W3157396950","doi":"10.1172/jci143078","title":"C2orf69 mutations disrupt mitochondrial function and cause a multisystem human disorder with recurring autoinflammation","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital; BC Children's Hospital","funders":"RWTH Aachen University; Deutsche Forschungsgemeinschaft","keywords":"Function (biology); Medicine; Mutation; Genetics; Biology; Gene","score_opus":0.04262870252707986,"score_gpt":0.341270778211756,"score_spread":0.29864207568467616,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3157396950","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9734794,0.00016816787,0.024415532,0.00046859347,0.0012205024,0.0001245717,0.0000036384038,0.00000806652,0.000111557085],"genre_scores_gemma":[0.9910429,0.000059702594,0.006210888,0.00026456412,0.0018405876,0.000008243819,0.00012974527,0.0000181225,0.0004252503],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99824744,0.00038012041,0.00086958206,0.0002258504,0.00017331287,0.00010370191],"domain_scores_gemma":[0.9985044,0.00008630228,0.0006497026,0.00015991631,0.00044782748,0.00015184707],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044051316,0.000111559944,0.00024215592,0.00005598035,0.00012447388,0.00004810422,0.000050082726,0.0002054933,0.000021111473],"category_scores_gemma":[0.0010788359,0.00009269702,0.00010151944,0.00011030044,0.00012771509,0.000029441004,0.00002674242,0.00023139051,0.0000034242885],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00081749295,0.00018342421,0.1528372,0.00007807068,0.00030905983,0.000051723142,0.00027203443,0.0012297394,0.83546144,0.0019771843,0.0013437817,0.005438866],"study_design_scores_gemma":[0.029000547,0.011685396,0.73025966,0.0009752444,0.0016423748,0.0027594424,0.0020031326,0.0025899038,0.12160986,0.008520799,0.08746038,0.0014932653],"about_ca_topic_score_codex":0.000005599596,"about_ca_topic_score_gemma":0.00017573722,"teacher_disagreement_score":0.7138516,"about_ca_system_score_codex":0.000009892804,"about_ca_system_score_gemma":0.00018258434,"threshold_uncertainty_score":0.37800744},"labels":[],"label_agreement":null},{"id":"W3158351699","doi":"10.1172/jci136459","title":"Frataxin deficiency promotes endothelial senescence in pulmonary hypertension","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":75,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Rehabilitation Institute; University of Toronto","funders":"National Center for Advancing Translational Sciences; National Heart, Lung, and Blood Institute; National Institute on Aging; National Cancer Institute; National Institutes of Health; Agence Nationale de la Recherche; Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology; American Heart Association","keywords":"Senescence; Pulmonary hypertension; Medicine; Biology; Internal medicine","score_opus":0.06294846259037065,"score_gpt":0.32839955593016923,"score_spread":0.26545109333979855,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3158351699","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946419,0.00041815202,0.0023792528,0.0009179751,0.0012769568,0.000051816216,0.000002547306,0.0000024160925,0.0003089804],"genre_scores_gemma":[0.99032754,0.0003737873,0.006764387,0.0012243931,0.0010322867,0.0000012652699,0.00002308347,0.000007852182,0.00024542757],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99842644,0.00036093488,0.0007857041,0.00018341257,0.00014082658,0.00010269737],"domain_scores_gemma":[0.9990658,0.00008412485,0.0003294528,0.0001433757,0.00027534264,0.00010186317],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00084631133,0.000073072064,0.00020797324,0.000042028616,0.000026960382,0.000011794748,0.000086749234,0.00019979694,0.000027550057],"category_scores_gemma":[0.003367122,0.00006196486,0.00011847848,0.000119671364,0.00009215407,0.000009790391,0.000035649,0.00023829835,0.000008495325],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012132607,0.00012464185,0.06002241,0.000008369408,0.0000051583784,0.00013406547,0.0000145342065,0.00003215161,0.93518144,0.00007473298,0.00051313336,0.0037680368],"study_design_scores_gemma":[0.0022771186,0.0013177779,0.14297149,0.00017357415,0.00004340402,0.0020354614,0.00014702452,0.0006797834,0.82805055,0.003769606,0.018242743,0.0002914884],"about_ca_topic_score_codex":0.0000033303902,"about_ca_topic_score_gemma":0.000014671619,"teacher_disagreement_score":0.10713091,"about_ca_system_score_codex":0.000005594148,"about_ca_system_score_gemma":0.0003266496,"threshold_uncertainty_score":0.40310028},"labels":[],"label_agreement":null},{"id":"W3160112606","doi":"10.1172/jci147878","title":"Tumor subtype defines distinct pathways of molecular and clinical progression in primary prostate cancer","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Genome British Columbia","funders":"Memorial Sloan-Kettering Cancer Center; Associazione Italiana per la Ricerca sul Cancro; Urology Care Foundation; College of Veterinary Medicine, Cornell University; MetLife Foundation; Damon Runyon Cancer Research Foundation; National Cancer Institute; Prostate Cancer Foundation; Weill Cornell Medical College; U.S. Department of Defense","keywords":"Prostate cancer; Cancer; Disease; Natural history; Biology; Prostate; Pathology; Medicine; Computational biology; Cancer research; Internal medicine; Genetics","score_opus":0.09844316615881343,"score_gpt":0.43650898699870433,"score_spread":0.3380658208398909,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3160112606","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99092185,0.004983742,0.00000914399,0.0034640355,0.00024428955,0.00022871967,0.000006770291,0.0000047290905,0.00013672498],"genre_scores_gemma":[0.9935104,0.0030815843,0.0026738595,0.00040652778,0.00021376705,0.0000065199088,0.000021179872,0.0000131577235,0.000072966286],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99727786,0.00034228715,0.0016262842,0.00018941335,0.0004179709,0.00014619541],"domain_scores_gemma":[0.9977625,0.00043761282,0.0007840876,0.00012784757,0.00061221374,0.00027571028],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018404422,0.00009986441,0.0006385823,0.00008355291,0.000021097474,0.000013714256,0.000052284206,0.00011055285,0.000017250084],"category_scores_gemma":[0.002501505,0.00006699212,0.00017023626,0.0002500223,0.00036437923,0.0001174426,0.00005244408,0.0005247774,9.4201744e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011483775,0.00039019543,0.9470279,0.00024668194,0.00007947524,0.0006427637,0.00006708477,0.0000024996907,0.008085889,0.000039457824,0.00014982975,0.042119842],"study_design_scores_gemma":[0.004602822,0.0012150203,0.97389406,0.0014525683,0.00013177062,0.00005936107,0.000036683665,0.00009477862,0.016757995,0.0014732479,0.00021550657,0.000066189066],"about_ca_topic_score_codex":0.000011494451,"about_ca_topic_score_gemma":0.000013858874,"teacher_disagreement_score":0.042053655,"about_ca_system_score_codex":0.000053764576,"about_ca_system_score_gemma":0.0016970801,"threshold_uncertainty_score":0.30105472},"labels":[],"label_agreement":null},{"id":"W3161754417","doi":"10.1172/jci146077","title":"Multiple-ancestry genome-wide association study identifies 27 loci associated with measures of hemolysis following blood storage","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Blood groups and transfusion","field":"Medicine","cited_by":99,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Heart, Lung, and Blood Institute; National Institutes of Health","keywords":"Hemolysis; Genome-wide association study; Biology; Genetics; Genome; Genetic association; Computational biology; Blood preservation; Association (psychology); Single-nucleotide polymorphism; Gene; Genotype; Immunology; Physiology; Psychology","score_opus":0.08684496741831424,"score_gpt":0.3407456264930424,"score_spread":0.25390065907472814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3161754417","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972189,0.0004315916,0.00035327018,0.0012559317,0.00044915586,0.00022264647,0.0000043419395,0.000015764857,0.000048382826],"genre_scores_gemma":[0.9981791,0.000110538014,0.000804807,0.00032530428,0.00026626044,0.0000022155277,0.000029113426,0.00002098449,0.00026167644],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99590284,0.0006046375,0.0018427119,0.00022152465,0.0012602182,0.00016804859],"domain_scores_gemma":[0.994384,0.0018499914,0.001978353,0.00019715898,0.0013730676,0.00021745614],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.003985856,0.00015170626,0.00097106845,0.00011564762,0.0000829859,0.000041800944,0.000094626004,0.00022973896,0.00001972588],"category_scores_gemma":[0.015776886,0.00011919499,0.00048706823,0.0005063169,0.00006706101,0.0002993092,0.000020602101,0.0006696552,0.0000015674143],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017412231,0.0015815552,0.98497117,0.000038690312,0.0024203788,0.0002842195,0.00055759656,0.0001338069,0.009504948,0.0000016788838,0.000097993405,0.00023384775],"study_design_scores_gemma":[0.007878336,0.0012737667,0.97587955,0.0004382349,0.0037991814,0.000013131195,0.0008710487,0.000065567045,0.009458153,0.00018095471,0.000029699544,0.00011238575],"about_ca_topic_score_codex":0.000027538557,"about_ca_topic_score_gemma":0.00022283486,"teacher_disagreement_score":0.011791029,"about_ca_system_score_codex":0.00008293359,"about_ca_system_score_gemma":0.00047354976,"threshold_uncertainty_score":0.99251366},"labels":[],"label_agreement":null},{"id":"W3162082239","doi":"10.1172/jci141801","title":"Transcriptome-wide association analysis identifies DACH1 as a kidney disease risk gene that contributes to fibrosis","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Renal Diseases and Glomerulopathies","field":"Medicine","cited_by":78,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Nutrition, Metabolism and Diabetes","funders":"National Institutes of Health; National Institute of Diabetes and Digestive and Kidney Diseases; University of Pennsylvania; U.S. Department of Veterans Affairs","keywords":"Biology; Genome-wide association study; Transcriptome; Kidney disease; Chromatin; Genetics; Gene; Gene expression; Genotype; Single-nucleotide polymorphism; Endocrinology","score_opus":0.03907101928606648,"score_gpt":0.35228091504905734,"score_spread":0.31320989576299085,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3162082239","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96319216,0.0019786598,0.0017432853,0.03212974,0.0005757332,0.00015399877,0.00015656426,0.000017952028,0.00005191616],"genre_scores_gemma":[0.98310316,0.001993705,0.0011879902,0.012196325,0.00046944566,0.0000066066477,0.00019806919,0.000014807183,0.00082987064],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9964994,0.0005752136,0.0015631708,0.00027058503,0.0008804817,0.00021113174],"domain_scores_gemma":[0.99403447,0.0014361218,0.0013329596,0.0002812676,0.0013451974,0.0015699764],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.002113162,0.0001593977,0.00089850114,0.0003261459,0.00010800611,0.00015296055,0.00010047536,0.00015699885,0.00015635922],"category_scores_gemma":[0.049586736,0.00013054158,0.0012809956,0.0010657843,0.00007909737,0.00031711996,0.000027229158,0.0004117731,0.00003560042],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00067416375,0.00020713652,0.9743628,0.000068829686,0.0022361665,0.00010394676,0.000111301124,0.00016137528,0.0029618205,0.000054388438,0.01852606,0.0005320084],"study_design_scores_gemma":[0.0016435464,0.00023039189,0.97028476,0.00035872564,0.009601151,0.0000039362094,0.00012210714,0.0002183371,0.007092666,0.0053224145,0.0049993363,0.00012259795],"about_ca_topic_score_codex":0.00003774736,"about_ca_topic_score_gemma":0.000013789466,"teacher_disagreement_score":0.047473576,"about_ca_system_score_codex":0.00013129631,"about_ca_system_score_gemma":0.00080861466,"threshold_uncertainty_score":0.958419},"labels":[],"label_agreement":null},{"id":"W3163745522","doi":"10.1172/jci149948","title":"Innovations in MD-only physician-scientist training: experiences from the Burroughs Wellcome Fund physician-scientist institutional award initiative","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Health and Medical Research Impacts","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institutes of Health","keywords":"Medicine; Alternative medicine; Medical education; Family medicine; Pathology","score_opus":0.4517209177133293,"score_gpt":0.5085931876884476,"score_spread":0.05687226997511835,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3163745522","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.933718,0.0003938456,0.001142793,0.06052898,0.0018104711,0.00021991791,0.000026556243,0.000010166618,0.0021492639],"genre_scores_gemma":[0.946696,0.00025264453,0.0020397198,0.048350457,0.0024455546,0.0000119699025,0.000087578956,0.000010573525,0.00010549541],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9951973,0.00057937676,0.001831581,0.00029868717,0.001586132,0.00050690776],"domain_scores_gemma":[0.9931139,0.0026955956,0.0009092375,0.0002749276,0.0012726404,0.0017337253],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0045948173,0.00015165393,0.0006043162,0.00016339342,0.00026741362,0.00010438476,0.00025618816,0.00015441893,0.00008603695],"category_scores_gemma":[0.05456879,0.000103475744,0.00020178383,0.0017271201,0.0014962374,0.0006363424,0.00006182082,0.0013561349,0.000030630206],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014353178,0.004911649,0.2060296,0.00033554307,0.00065038423,0.002680051,0.05607347,0.00021501833,0.019311443,0.032661393,0.25885275,0.41684338],"study_design_scores_gemma":[0.006996142,0.0011842371,0.7542251,0.002424886,0.00011997674,0.00014638128,0.018831214,0.0013001551,0.0038196263,0.015786158,0.19484998,0.00031619312],"about_ca_topic_score_codex":0.00004947416,"about_ca_topic_score_gemma":0.000073693845,"teacher_disagreement_score":0.5481954,"about_ca_system_score_codex":0.00019017771,"about_ca_system_score_gemma":0.018044401,"threshold_uncertainty_score":0.98752236},"labels":[],"label_agreement":null},{"id":"W3163808478","doi":"10.1172/jci150646","title":"A randomized double-blind controlled trial of convalescent plasma in adults with severe COVID-19","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":172,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Neurological Disorders and Stroke; National Institute of Allergy and Infectious Diseases; Skoll Foundation","keywords":"Medicine; Randomized controlled trial; Convalescent plasma; Confidence interval; Odds ratio; Internal medicine; Randomization; Population; Coronavirus disease 2019 (COVID-19); Disease","score_opus":0.1608629859128422,"score_gpt":0.4484897559255046,"score_spread":0.2876267700126624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3163808478","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9899823,0.00019736422,0.00014751591,0.0064943517,0.0003633168,0.0022084585,0.000001852895,0.000008176497,0.0005966311],"genre_scores_gemma":[0.9816704,0.000074418866,0.0007881407,0.0167647,0.00058911706,0.000048478953,0.0000046390155,0.000016199227,0.000043901695],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.99410975,0.001263709,0.0031330488,0.00023921614,0.0010512584,0.00020300696],"domain_scores_gemma":[0.99151653,0.00504608,0.0017459894,0.00024453216,0.0011511241,0.000295733],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.007731356,0.00016107452,0.0022526297,0.000270869,0.000029478304,0.000026303347,0.00013351605,0.00026175997,0.000029617744],"category_scores_gemma":[0.023371546,0.0001039185,0.0006167839,0.00045460282,0.0005205334,0.00014557615,0.00003129674,0.0008702215,0.0000052092932],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.9811688,0.00089160795,0.015104479,0.00025525052,0.000401791,0.000400588,0.00034931453,0.00002596039,0.0005644825,0.00027822683,0.00018316766,0.00037633075],"study_design_scores_gemma":[0.98709303,0.002184298,0.00039650997,0.0008904049,0.0003571424,0.00021884282,0.0001922132,0.0013510861,0.005552089,0.0006646434,0.0009974801,0.00010228107],"about_ca_topic_score_codex":0.00004841262,"about_ca_topic_score_gemma":0.000088393834,"teacher_disagreement_score":0.015640188,"about_ca_system_score_codex":0.00011596559,"about_ca_system_score_gemma":0.0061822725,"threshold_uncertainty_score":0.99945176},"labels":[],"label_agreement":null},{"id":"W3165277981","doi":"10.1172/jci147834","title":"Rare loss-of-function variants in type I IFN immunity genes are not associated with severe COVID-19","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Genomics; McGill Genome Centre; McGill University; Jewish General Hospital","funders":"National Center for Advancing Translational Sciences; National Institute on Aging","keywords":"Biology; Gene; Exome sequencing; Genetics; Population; Candidate gene; Loss function; Coronavirus disease 2019 (COVID-19); Exome; Mutation; Disease; Medicine; Phenotype; Internal medicine","score_opus":0.10748775227812225,"score_gpt":0.36260536439297014,"score_spread":0.2551176121148479,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3165277981","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959881,0.001238601,0.0001302778,0.0013456349,0.0011201507,0.000066491404,0.000012923204,0.000009623383,0.0000881977],"genre_scores_gemma":[0.9973436,0.00029451304,0.00010649045,0.001351983,0.000047843336,8.810018e-7,0.000059582257,0.000009957918,0.00078513304],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9965271,0.0018914199,0.0012163048,0.00013459711,0.00008323741,0.0001473674],"domain_scores_gemma":[0.9962631,0.0014077964,0.0013447637,0.00017680252,0.0007453078,0.00006224935],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0018285405,0.00011654493,0.00054172706,0.00012521345,0.000074449745,0.000013331488,0.00014592645,0.00037610254,0.0003748339],"category_scores_gemma":[0.012934984,0.00009153576,0.00013418826,0.00031511215,0.00028595584,0.00019037357,0.000043310498,0.0007470885,0.000023321008],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.014589631,0.0010631816,0.7639026,0.00009689746,0.0010890344,0.0002443358,0.00075380015,0.00042592533,0.20847198,0.00047962466,0.00496548,0.003917505],"study_design_scores_gemma":[0.0046189493,0.001562493,0.93981946,0.0004853042,0.00013879867,0.0003745121,0.0005782723,0.000015484422,0.048235822,0.0007528825,0.0032580008,0.0001600402],"about_ca_topic_score_codex":0.00003865939,"about_ca_topic_score_gemma":0.0001269778,"teacher_disagreement_score":0.17591684,"about_ca_system_score_codex":0.00007713597,"about_ca_system_score_gemma":0.0011987967,"threshold_uncertainty_score":0.9953795},"labels":[],"label_agreement":null},{"id":"W3166796049","doi":"10.1172/jci146870","title":"Dysregulation of mannose-6-phosphate–dependent cholesterol homeostasis in acinar cells mediates pancreatitis","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pancreatitis Pathology and Treatment","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; National Institute on Alcohol Abuse and Alcoholism; U.S. Department of Veterans Affairs","keywords":"Homeostasis; Pancreatitis; Endocrinology; Internal medicine; Mannose; Chemistry; Cholesterol; Phosphate; Medicine; Biology; Biochemistry","score_opus":0.05178799354188177,"score_gpt":0.35448938409210284,"score_spread":0.30270139055022105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3166796049","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99601483,0.0014534697,0.00011333589,0.0014981466,0.0004971709,0.00014671849,0.000014395837,0.000007272426,0.00025465482],"genre_scores_gemma":[0.9928848,0.0021585526,0.0041209864,0.00041726689,0.00022314048,0.000004188367,0.000037276983,0.000012119876,0.0001416792],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99708736,0.00037438722,0.0017285909,0.00018708546,0.00047830006,0.00014428918],"domain_scores_gemma":[0.9974545,0.0004876506,0.0010369595,0.00020412047,0.0006141067,0.00020263862],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012999703,0.00012894654,0.0008292745,0.00015730466,0.000024296849,0.000009872722,0.00006362799,0.00023796888,0.00009134437],"category_scores_gemma":[0.001460332,0.00010824682,0.00020774627,0.00024464374,0.00017689455,0.00021355925,0.000023422695,0.00036244842,0.000014058442],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023829522,0.0005233342,0.9749451,0.000086291984,0.00017720425,0.0009843528,0.0002732976,0.00010044975,0.008775245,0.00018125077,0.00027941432,0.013435762],"study_design_scores_gemma":[0.0040127034,0.00076431374,0.8539963,0.0004454402,0.00032085888,0.00033439384,0.00008689621,0.00007174165,0.13790563,0.0018871835,0.00010609065,0.00006846791],"about_ca_topic_score_codex":0.000019561134,"about_ca_topic_score_gemma":0.00003519045,"teacher_disagreement_score":0.12913038,"about_ca_system_score_codex":0.000085224725,"about_ca_system_score_gemma":0.00040563944,"threshold_uncertainty_score":0.44141775},"labels":[],"label_agreement":null},{"id":"W3172983054","doi":"10.1172/jci148272","title":"Untargeted metabolomics and infrared ion spectroscopy identify biomarkers for pyridoxine-dependent epilepsy","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Alberta; University of Toronto; BC Children's Hospital","funders":"Canadian Institutes of Health Research; Radboud Universiteit; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; Stichting Stofwisselkracht","keywords":"Metabolomics; Pyridoxine; Epilepsy; Chemistry; Infrared spectroscopy; Spectroscopy; Medicine; Computational biology; Biochemistry; Biology; Chromatography; Psychiatry; Physics; Organic chemistry","score_opus":0.04049993282197334,"score_gpt":0.3593608151586908,"score_spread":0.31886088233671744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3172983054","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9876253,0.0036138785,0.0060049314,0.001229998,0.0012509462,0.00013324668,0.000023176244,0.0000040978543,0.00011445063],"genre_scores_gemma":[0.9337562,0.00844829,0.054548085,0.0010915574,0.0016428524,0.0000081091475,0.0001089584,0.000029875575,0.00036611632],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99812335,0.00017846301,0.0010792059,0.00026653925,0.0001821782,0.00017024696],"domain_scores_gemma":[0.9982394,0.00014837751,0.0007574298,0.00018057397,0.00049654895,0.00017768204],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016062919,0.00013987927,0.0004552114,0.00007631464,0.00007850079,0.000053103857,0.000114159644,0.00018669551,0.000012015169],"category_scores_gemma":[0.0032876083,0.00012340522,0.0002570647,0.00012647118,0.00015059319,0.000017143342,0.0000839331,0.00018080352,9.4351407e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033013787,0.00007175803,0.030167814,0.000027861299,0.0005359317,0.0000061828187,0.00002041513,0.000013102081,0.9613655,0.00055355765,0.005953911,0.00095382746],"study_design_scores_gemma":[0.0026811108,0.00072050636,0.07110081,0.00002911081,0.00027080238,0.00005466482,0.00014902242,0.0001572191,0.8897744,0.013056787,0.021801593,0.00020396437],"about_ca_topic_score_codex":0.0000022009847,"about_ca_topic_score_gemma":0.00001066682,"teacher_disagreement_score":0.071591094,"about_ca_system_score_codex":0.000012589898,"about_ca_system_score_gemma":0.00022274461,"threshold_uncertainty_score":0.5032319},"labels":[],"label_agreement":null},{"id":"W3173280716","doi":"10.1172/jci138022","title":"Serine hydroxymethyltransferase 2 expression promotes tumorigenesis in rhabdomyosarcoma with 12q13-q14 amplification","year":2021,"lang":"zh","type":"article","venue":"Journal of Clinical Investigation","topic":"Cancer-related gene regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pediatric Oncology Group","funders":"Medical School, University of Michigan; National Institutes of Health; George Washington University; National Cancer Institute; Princeton University","keywords":"Amplicon; Biology; Carcinogenesis; Cancer research; Rhabdomyosarcoma; Serine hydroxymethyltransferase; Molecular biology; Gene; Genetics; Serine; Polymerase chain reaction; Pathology; Sarcoma; Medicine","score_opus":0.03517303986054794,"score_gpt":0.33110741566287344,"score_spread":0.2959343758023255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3173280716","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.988087,0.0030644794,0.004574894,0.003095584,0.00073205144,0.0003091856,0.000014475047,0.000007285659,0.00011502659],"genre_scores_gemma":[0.98821235,0.0024660483,0.0070670242,0.00021919064,0.0015865964,0.000010141904,0.00019191905,0.000049718008,0.00019702477],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9950686,0.0010075226,0.0025116126,0.0005611186,0.0005560521,0.0002950633],"domain_scores_gemma":[0.9964536,0.0002155551,0.0015187851,0.00049530854,0.00096035574,0.00035638688],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0019669312,0.0003110485,0.0007024568,0.00016584925,0.000082810744,0.00007351836,0.00022667764,0.00060599385,0.00006460041],"category_scores_gemma":[0.0013833827,0.00027828634,0.0003131629,0.0005739369,0.00027642347,0.000059548256,0.000054663673,0.00065385504,0.00000726565],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001107295,0.00058983354,0.06831588,0.00016765854,0.00015752175,0.00007945878,0.00017647298,0.0038768584,0.9096017,0.000091493916,0.00034095143,0.015494903],"study_design_scores_gemma":[0.0038923318,0.0017166858,0.14144318,0.0011404486,0.00021680856,0.00026227479,0.00013761823,0.0012187635,0.8455258,0.0016502481,0.0023869711,0.00040889604],"about_ca_topic_score_codex":0.000019802594,"about_ca_topic_score_gemma":0.0001382918,"teacher_disagreement_score":0.0731273,"about_ca_system_score_codex":0.000091953014,"about_ca_system_score_gemma":0.0015419765,"threshold_uncertainty_score":0.9999669},"labels":[],"label_agreement":null},{"id":"W3174972846","doi":"10.1172/jci144201","title":"Passive transfer of fibromyalgia symptoms from patients to mice","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Fibromyalgia and Chronic Fatigue Syndrome Research","field":"Medicine","cited_by":266,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research; Seventh Framework Programme; Horizon 2020 Framework Programme; Medical Research Council; Versus Arthritis; Karolinska Institutet; Stiftelsen Konung Gustaf V:s 80-årsfond; Vetenskapsrådet; Home Office; Pain Relief Foundation; European Commission; Stockholms Läns Landsting; Knut och Alice Wallenbergs Stiftelse; Menzies Centre for Australian Studies, King's College London, University of London; Eli Lilly and Company; King's College London; National Institute for Health and Care Research","keywords":"Medicine; Fibromyalgia; Nociception; Stimulation; Spinal cord; Pathophysiology; Immunology; Anesthesia; Internal medicine; Endocrinology; Receptor","score_opus":0.05160136888946774,"score_gpt":0.36433184579196715,"score_spread":0.3127304769024994,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3174972846","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948795,0.00016834884,0.00044161256,0.0038770863,0.00038175526,0.00014854113,0.000018524526,0.0000054627308,0.00007919015],"genre_scores_gemma":[0.99551994,0.0000704771,0.003931694,0.00010035905,0.00011707235,0.000001697164,0.00004188177,0.000016695818,0.00020017],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9969761,0.00026884896,0.0015944644,0.00019197157,0.00079307996,0.00017555861],"domain_scores_gemma":[0.99694055,0.00065564393,0.00030488716,0.00021666451,0.0013428562,0.000539421],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053825864,0.00011277042,0.0006453838,0.00010339272,0.000025357478,0.000014584453,0.00012666534,0.00019120163,0.00037251346],"category_scores_gemma":[0.0026773931,0.000090927024,0.00033887784,0.000323068,0.00014792357,0.00014130861,0.000031680982,0.0005069824,0.000032804815],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016947283,0.0016529742,0.828437,0.0029467577,0.0013419591,0.0003182916,0.0013125818,0.000067331435,0.13038364,0.00037564107,0.01689608,0.014573034],"study_design_scores_gemma":[0.0042377133,0.0026449643,0.91104394,0.003049884,0.0002191534,0.000032488908,0.00008618657,0.000106526284,0.07687203,0.0013610291,0.0002355055,0.000110556735],"about_ca_topic_score_codex":0.000017324004,"about_ca_topic_score_gemma":6.782273e-7,"teacher_disagreement_score":0.08260698,"about_ca_system_score_codex":0.00006303676,"about_ca_system_score_gemma":0.0010477438,"threshold_uncertainty_score":0.40787613},"labels":[],"label_agreement":null},{"id":"W3176503729","doi":"10.1172/jci152475","title":"Association of rare predicted loss-of-function variants of influenza-related type I IFN genes with critical COVID-19 pneumonia. Reply.","year":2021,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"","keywords":"Odds ratio; Zhàng; Population stratification; Confounding; Case-control study; Population; Genetics; Biology; Genetic association; Pneumonia; Medicine; Genotype; Single-nucleotide polymorphism; Gene; Internal medicine","score_opus":0.06615115426514982,"score_gpt":0.36785602767771086,"score_spread":0.301704873412561,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3176503729","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.88679045,0.002274995,0.0028753227,0.10575612,0.0016594459,0.000308469,0.00021776787,0.000009502659,0.00010794667],"genre_scores_gemma":[0.8595461,0.0029707383,0.003820922,0.12564048,0.004721909,0.000016817625,0.0018313796,0.00011100027,0.0013406044],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9959768,0.0006353426,0.0023531625,0.00029068842,0.000597782,0.0001462388],"domain_scores_gemma":[0.99224144,0.00044417632,0.0040078256,0.0003904115,0.0027705734,0.00014554174],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0013987481,0.00018120473,0.0006976045,0.00012044912,0.00003964445,0.000016058155,0.00021110807,0.0011464116,0.00006115187],"category_scores_gemma":[0.009302812,0.00015362952,0.0002826594,0.00031336793,0.00033743607,0.000022879844,0.000039610022,0.0008128735,6.9882304e-7],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019974073,0.0005248725,0.29330665,0.0016287784,0.0035809048,0.00008160367,0.00017653184,0.0018550972,0.22028714,0.00017215742,0.47493044,0.0014584108],"study_design_scores_gemma":[0.009096483,0.011544917,0.32054406,0.0027353272,0.0052423896,0.00027769877,0.00019160168,0.00073338917,0.05262575,0.005349913,0.59045035,0.0012081339],"about_ca_topic_score_codex":0.000024247758,"about_ca_topic_score_gemma":0.0000065487257,"teacher_disagreement_score":0.16766138,"about_ca_system_score_codex":0.00006339775,"about_ca_system_score_gemma":0.0020179916,"threshold_uncertainty_score":0.9990423},"labels":[],"label_agreement":null},{"id":"W3179202411","doi":"10.1172/jci141833","title":"WNT6/ACC2-induced storage of triacylglycerols in macrophages is exploited by Mycobacterium tuberculosis","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Endoplasmic Reticulum Stress and Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Exzellenzclusters Entzündungsforschung; Bundesministerium für Bildung und Forschung; Leibniz-Gemeinschaft; Deutsche Forschungsgemeinschaft; Deutsches Zentrum für Infektionsforschung","keywords":"Mycobacterium tuberculosis; Tuberculosis; Virology; Microbiology; Mycobacterium; Biology; Chemistry; Medicine; Pathology","score_opus":0.03839305500355592,"score_gpt":0.34575529528579524,"score_spread":0.3073622402822393,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3179202411","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976363,0.0008505579,0.000082961924,0.00087719545,0.00033894216,0.000069980684,0.000040956962,0.0000020722623,0.000101041136],"genre_scores_gemma":[0.9972003,0.0010493486,0.0005367569,0.00077183585,0.00027005578,0.0000030650885,0.00006725547,0.00001350936,0.00008788194],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977346,0.00034070647,0.0013363902,0.00021147724,0.00024083008,0.00013597307],"domain_scores_gemma":[0.99832606,0.0001150266,0.00076435274,0.00022239024,0.00035236546,0.00021979553],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006104623,0.00012252056,0.00041320533,0.00005316472,0.000019091925,0.0000237546,0.00013206215,0.00021790231,0.000054204633],"category_scores_gemma":[0.0019113837,0.00010863336,0.0002866798,0.00015926572,0.0000892996,0.000018806395,0.000051548934,0.0002221062,0.000002017956],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003316211,0.00024866642,0.08160688,0.00004953941,0.00009363001,0.000037261958,0.00005684829,0.000026915535,0.9100918,0.000009833356,0.005855726,0.0015912701],"study_design_scores_gemma":[0.0029906894,0.0005202436,0.058173995,0.00013263435,0.00007925362,0.00001940953,0.00016242776,0.00010046946,0.9362579,0.0002596503,0.001162772,0.00014054193],"about_ca_topic_score_codex":0.000014779822,"about_ca_topic_score_gemma":0.0000056278204,"teacher_disagreement_score":0.026166106,"about_ca_system_score_codex":0.0000121886915,"about_ca_system_score_gemma":0.0002672804,"threshold_uncertainty_score":0.442994},"labels":[],"label_agreement":null},{"id":"W3181088912","doi":"10.1172/jci148979","title":"HLA-E–restricted HIV-1–specific CD8+ T cell responses in natural infection","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Vanderbilt University","keywords":"Immunodominance; Cytotoxic T cell; Epitope; CD8; Biology; Immunology; T cell; Human leukocyte antigen; Subdominant; Virology; Immune system; Major histocompatibility complex; Antigen; In vitro; Genetics","score_opus":0.056818061997560454,"score_gpt":0.33222574136709976,"score_spread":0.2754076793695393,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3181088912","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.984709,0.0017838934,0.0001513596,0.0011092726,0.011523607,0.00006157336,9.109201e-7,0.000018171082,0.0006421975],"genre_scores_gemma":[0.9904537,0.0009811658,0.0002023316,0.0005327678,0.00024327407,0.0000015289105,0.00006119855,0.000009993557,0.0075140256],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9965448,0.0015480462,0.0015102127,0.00017058264,0.000072983545,0.00015337268],"domain_scores_gemma":[0.9974832,0.0010395652,0.0008565683,0.00014892932,0.0004330868,0.000038683287],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011534885,0.00011476573,0.00035339367,0.00025107444,0.000085329324,0.000031390344,0.00008239399,0.0002562494,0.00054859737],"category_scores_gemma":[0.0028548262,0.000101604506,0.00022827915,0.0003672525,0.0001278605,0.00039329688,0.000026838052,0.0014727501,0.00030196112],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014522081,0.00041763674,0.12238749,0.000016742826,0.000074069176,0.000059222126,0.00020018149,0.00010214624,0.8130639,0.00014771962,0.056004748,0.0060739177],"study_design_scores_gemma":[0.003400481,0.000424435,0.52226096,0.00013295135,0.00003955745,0.0003690883,0.00020257084,0.00006928613,0.2894922,0.00031962225,0.18313192,0.0001569233],"about_ca_topic_score_codex":0.000015387834,"about_ca_topic_score_gemma":0.000012503463,"teacher_disagreement_score":0.5235717,"about_ca_system_score_codex":0.00007302162,"about_ca_system_score_gemma":0.0002670884,"threshold_uncertainty_score":0.63984483},"labels":[],"label_agreement":null},{"id":"W3190418079","doi":"10.1172/jci148278","title":"Interconnections between circadian clocks and metabolism","year":2021,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Circadian rhythm and melatonin","field":"Neuroscience","cited_by":160,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Nutrition, Metabolism and Diabetes","funders":"National Institutes of Health; JPB Foundation; National Institute of Diabetes and Digestive and Kidney Diseases; University of Pennsylvania","keywords":"Circadian rhythm; Circadian clock; Bacterial circadian rhythms; Biology; Neuroscience; Adaptation (eye); Oscillating gene; CLOCK","score_opus":0.25298308119546903,"score_gpt":0.4397086976927418,"score_spread":0.18672561649727276,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3190418079","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.003976097,0.9927349,0.0000952974,0.00042167393,0.0022550172,0.00019931427,0.000024437975,0.000015282732,0.00027798617],"genre_scores_gemma":[0.0008833762,0.9947705,0.00034666652,0.00042848222,0.0032842427,0.000004800639,0.00000815791,0.000036335765,0.00023741095],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9948882,0.0013530527,0.002832728,0.00039004046,0.0003268955,0.0002091009],"domain_scores_gemma":[0.99301803,0.0035413841,0.002377185,0.0002562408,0.00014683175,0.00066031783],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.001808174,0.0002666057,0.0024094225,0.00033180264,0.00010910048,0.00013545257,0.00025313976,0.00057766284,0.000046592402],"category_scores_gemma":[0.0111376755,0.00021514371,0.00095989555,0.00047788981,0.0003579477,0.0003366767,0.000076102864,0.001796675,0.000034424185],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000010862925,0.000024538323,0.0002530649,0.00062586914,0.00008431388,0.00007222364,0.0000787339,3.3455206e-7,0.000006417408,0.0062412363,0.00086106197,0.99175113],"study_design_scores_gemma":[0.000271495,0.000059072194,0.00066769694,0.005588625,0.001063405,0.00065953576,0.000012001634,0.0000027143371,0.00011944187,0.0010037821,0.99034864,0.0002035866],"about_ca_topic_score_codex":0.000002771356,"about_ca_topic_score_gemma":0.0000014451111,"teacher_disagreement_score":0.9915475,"about_ca_system_score_codex":0.00004171287,"about_ca_system_score_gemma":0.0009526259,"threshold_uncertainty_score":0.9971919},"labels":[],"label_agreement":null},{"id":"W3193668006","doi":"10.1172/jci143328","title":"Differential roles of FOXO transcription factors on insulin action in brown and white adipose tissue","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Adipose Tissue and Metabolism","field":"Medicine","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Nutrition, Metabolism and Diabetes","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Cancer Institute; Diabetes Research Center; National Institutes of Health; Joslin Diabetes Center","keywords":"Internal medicine; Endocrinology; Hyperinsulinemia; White adipose tissue; Insulin resistance; Adipose tissue; FOXO1; Adipocyte; Biology; Insulin; Insulin receptor; Brown adipose tissue; PRDM16; Medicine; Protein kinase B; Cell biology; Signal transduction","score_opus":0.10256846651221725,"score_gpt":0.38110390884973705,"score_spread":0.2785354423375198,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3193668006","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964268,0.00089497806,0.00048205812,0.001446477,0.00056536624,0.000102429796,0.0000032163116,0.000005452952,0.00007319899],"genre_scores_gemma":[0.99687994,0.0013882807,0.0008510838,0.00022844729,0.00049651007,7.1013505e-7,0.00001785847,0.00001095642,0.0001262253],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99804807,0.00019919449,0.0012080922,0.00013928836,0.00030790226,0.00009747337],"domain_scores_gemma":[0.9987019,0.00018414513,0.00056965795,0.00010549437,0.00023077463,0.00020803115],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045930056,0.00010519307,0.0005657592,0.0001619106,0.000019861207,0.000011461581,0.000037056514,0.0001997498,0.00008040931],"category_scores_gemma":[0.001060694,0.000083418396,0.00012867282,0.00016552347,0.0001047025,0.00020553863,0.000008332352,0.0004803503,0.0000019747094],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015639429,0.0009523708,0.22425659,0.00022656129,0.00022458106,0.000092874616,0.002457478,0.000051777322,0.54901916,0.0008691065,0.0003716309,0.21991396],"study_design_scores_gemma":[0.0029552781,0.00086988043,0.82894623,0.00042096432,0.0002772861,0.00004603081,0.00018612026,0.000097833276,0.16283934,0.0014082652,0.0018814085,0.00007136327],"about_ca_topic_score_codex":0.000009596195,"about_ca_topic_score_gemma":0.00005139214,"teacher_disagreement_score":0.60468966,"about_ca_system_score_codex":0.000019238867,"about_ca_system_score_gemma":0.00016800115,"threshold_uncertainty_score":0.34017035},"labels":[],"label_agreement":null},{"id":"W3195517888","doi":"10.1172/jci149236","title":"Group IIA secreted phospholipase A2 is associated with the pathobiology leading to COVID-19 mortality","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"COVID-19 Clinical Research Studies","field":"Medicine","cited_by":100,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Impact","funders":"National Center for Complementary and Integrative Health; National Center for Advancing Translational Sciences; National Institute of General Medical Sciences; National Cancer Institute; National Heart, Lung, and Blood Institute; National Institute of Allergy and Infectious Diseases; National Institute of Environmental Health Sciences; U.S. Department of Veterans Affairs","keywords":"Coronavirus disease 2019 (COVID-19); Medicine; Internal medicine; Cohort; Disease; Blood urea nitrogen; Gastroenterology; Kidney; Infectious disease (medical specialty)","score_opus":0.22355113901790874,"score_gpt":0.5100246734373993,"score_spread":0.2864735344194906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3195517888","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.87500495,0.00011129503,0.0022234446,0.12199859,0.00026231242,0.0002962551,0.000018623428,0.000024124996,0.000060389888],"genre_scores_gemma":[0.9012987,0.00021063903,0.00077376,0.09668182,0.00053505506,0.00001023162,0.000026392769,0.000018159788,0.00044523302],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.995048,0.0014389341,0.0018392788,0.00038435,0.00093301875,0.00035640833],"domain_scores_gemma":[0.96283376,0.030850872,0.0016561548,0.00062279776,0.0020727136,0.001963722],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0101166945,0.0001886115,0.0010615654,0.000091668124,0.00020449967,0.000044342833,0.00023301161,0.0002641976,0.00019491554],"category_scores_gemma":[0.36030424,0.00011052162,0.00041300102,0.00082166574,0.0007169813,0.00012616863,0.00016886821,0.0014149749,0.000024005029],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014881429,0.00056175946,0.94842154,0.00019594977,0.0016384742,0.0014550833,0.0013089624,0.00021654369,0.006615064,0.0004624854,0.034832325,0.0028036865],"study_design_scores_gemma":[0.007195047,0.0045857728,0.9393132,0.00069380406,0.0010656837,0.00006352187,0.00046861265,0.0008509633,0.0020696714,0.00591772,0.037462972,0.00031305346],"about_ca_topic_score_codex":0.0000608969,"about_ca_topic_score_gemma":0.00015239991,"teacher_disagreement_score":0.35018754,"about_ca_system_score_codex":0.00028676083,"about_ca_system_score_gemma":0.0025686393,"threshold_uncertainty_score":0.6450842},"labels":[],"label_agreement":null},{"id":"W3196655613","doi":"10.1172/jci138230","title":"T cell protein tyrosine phosphatase protects intestinal barrier function by restricting epithelial tight junction remodeling","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Barrier Structure and Function Studies","field":"Neuroscience","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; University of California, San Diego; Monash University; Crohn's and Colitis Foundation; National Institutes of Health; National Institute of Allergy and Infectious Diseases; Pfizer; Janssen Pharmaceuticals; Crohn's and Colitis Foundation of America","keywords":"Tight junction; Occludin; Claudin; Protein tyrosine phosphatase; Intestinal permeability; Cell biology; Barrier function; Biology; Inflammatory bowel disease; Paracellular transport; Cancer research; Immunology; Signal transduction; Internal medicine; Medicine; Biochemistry; Permeability (electromagnetism)","score_opus":0.07149544681708048,"score_gpt":0.319902093367877,"score_spread":0.24840664655079653,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3196655613","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9658852,0.0007747796,0.027210206,0.0017360823,0.0034113517,0.0003242142,0.000015105644,0.000061937906,0.0005811054],"genre_scores_gemma":[0.9907569,0.000108352775,0.0048207166,0.001750799,0.0016811164,0.000009441217,0.000010904686,0.000027871056,0.00083384546],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99618137,0.00065999833,0.0017840811,0.00044022413,0.00068349787,0.0002508457],"domain_scores_gemma":[0.9965494,0.0005653663,0.0016053506,0.00022708773,0.0007372112,0.00031558448],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0015310857,0.00021681438,0.0004504894,0.00011378814,0.00036633725,0.00012621652,0.00015046298,0.0002082138,0.00007052751],"category_scores_gemma":[0.014450206,0.00017944437,0.00023131349,0.00061996625,0.00021042298,0.00073215057,0.000068810885,0.0010891848,0.000020423506],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00056960364,0.00010481948,0.0014169555,0.00004978689,0.00001869862,0.000043852866,0.00011657285,0.00022038263,0.97503287,0.00036833726,0.00868826,0.013369856],"study_design_scores_gemma":[0.0016394774,0.00074194104,0.0015737921,0.00020701264,0.000099918914,0.00013543246,0.00016267698,0.0015843104,0.9743964,0.006563346,0.012671942,0.00022373108],"about_ca_topic_score_codex":0.000009530708,"about_ca_topic_score_gemma":0.000002179398,"teacher_disagreement_score":0.024871735,"about_ca_system_score_codex":0.00006111143,"about_ca_system_score_gemma":0.00043619363,"threshold_uncertainty_score":0.9938515},"labels":[],"label_agreement":null},{"id":"W3196745917","doi":"10.1172/jci148013","title":"Alveolar macrophages from persons living with HIV show impaired epigenetic response to Mycobacterium tuberculosis","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University and Génome Québec Innovation Centre; Centre Hospitalier Universitaire Sainte-Justine; McGill University; McGill University Health Centre","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Epigenetics; Tuberculosis; Immune system; Human immunodeficiency virus (HIV); Innate immune system; Mycobacterium tuberculosis; Chromatin","score_opus":0.06440302404834046,"score_gpt":0.37828296601903383,"score_spread":0.31387994197069335,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3196745917","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9313609,0.0006347647,0.0006147908,0.06689198,0.0002598251,0.00014307872,0.000023030358,0.000017596865,0.00005402396],"genre_scores_gemma":[0.969417,0.00035361815,0.021454833,0.0072590522,0.0010708312,0.000006279971,0.000019970506,0.000030266126,0.00038817097],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.995078,0.0022316827,0.0014331455,0.0003400346,0.00055318134,0.00036391753],"domain_scores_gemma":[0.9919918,0.00509286,0.00048193056,0.00037682103,0.00077085587,0.0012857134],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0041762716,0.0001822814,0.00090155477,0.00017646761,0.000084472376,0.000051109255,0.00014451217,0.00023784299,0.00037246934],"category_scores_gemma":[0.03309645,0.0001331664,0.00037275837,0.00037372578,0.00021824204,0.000184201,0.00007718891,0.00084458594,0.000068388006],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002782667,0.00023343955,0.82934296,0.000042685246,0.0005354664,0.00057584996,0.00058291515,0.000092407754,0.14992996,0.0000055715745,0.013338377,0.0025377183],"study_design_scores_gemma":[0.001307863,0.0021334284,0.9829475,0.00076569396,0.0002956162,0.00031469142,0.00035949427,0.00045037316,0.008634865,0.00014594298,0.0025055984,0.00013888949],"about_ca_topic_score_codex":0.000047592068,"about_ca_topic_score_gemma":0.000041667616,"teacher_disagreement_score":0.1536046,"about_ca_system_score_codex":0.00009960621,"about_ca_system_score_gemma":0.0009999544,"threshold_uncertainty_score":0.9750482},"labels":[],"label_agreement":null},{"id":"W3196907073","doi":"10.1172/jci146643","title":"Recipient APOL1 risk alleles associate with death-censored renal allograft survival and rejection episodes","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Renal Diseases and Glomerulopathies","field":"Medicine","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"National Institute of Environmental Health Sciences; National Institute of Diabetes and Digestive and Kidney Diseases; Icahn School of Medicine at Mount Sinai; National Institute of Allergy and Infectious Diseases; National Institute on Aging; National Institutes of Health; American Heart Association","keywords":"Allele; Kidney transplantation; Genotype; Genotyping; Transplantation; SNP; Immune system; Organ transplantation; Transplant rejection","score_opus":0.05349094650339865,"score_gpt":0.3509248290467266,"score_spread":0.297433882543328,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3196907073","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99418855,0.0014490272,0.00046596906,0.0032617096,0.00030752053,0.00009105528,0.000008961606,0.000014934639,0.00021225138],"genre_scores_gemma":[0.9840946,0.0055162613,0.0088754175,0.00043185827,0.00080470566,0.0000020846344,0.000024489918,0.000017582812,0.00023300789],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974207,0.0005714986,0.0011066238,0.00021024763,0.0005308869,0.00016004265],"domain_scores_gemma":[0.99695694,0.00058781705,0.0011039305,0.00013942497,0.00077687245,0.0004349875],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017841266,0.00013522398,0.00058963505,0.000083896564,0.00009705812,0.00005190871,0.000041211686,0.00015381734,0.000019412904],"category_scores_gemma":[0.004623459,0.00009293887,0.00024638532,0.00019763088,0.00020089025,0.00018692845,0.000024111865,0.0005461106,0.0000023890063],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012607817,0.00025865887,0.9825025,0.00006596462,0.00048109863,0.00025421038,0.0001410216,0.00008834253,0.0019977156,0.0004231074,0.0013303265,0.011196269],"study_design_scores_gemma":[0.0027437722,0.0014099887,0.9868788,0.0005606007,0.0006650699,0.00023081584,0.00025022303,0.00030751197,0.0016781498,0.0036592947,0.0014997217,0.00011606413],"about_ca_topic_score_codex":0.000035651752,"about_ca_topic_score_gemma":0.00006795518,"teacher_disagreement_score":0.0110802045,"about_ca_system_score_codex":0.00003838516,"about_ca_system_score_gemma":0.00034148007,"threshold_uncertainty_score":0.55350465},"labels":[],"label_agreement":null},{"id":"W3197836405","doi":"10.1172/jci147076","title":"Immune response to intravenous immunoglobulin in patients with Kawasaki disease and MIS-C","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Kawasaki Disease and Coronary Complications","field":"Medicine","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of General Medical Sciences; National Heart, Lung, and Blood Institute; University of California, San Diego; National Institutes of Health; Novo Nordisk Fonden","keywords":"Kawasaki disease; Medicine; Immunology; Antibody; Immune system; Blockade; Disease; Immunoglobulin G; Intravenous Immunoglobulins; Innate immune system; Receptor; Internal medicine","score_opus":0.034262149722369774,"score_gpt":0.33837545723061013,"score_spread":0.30411330750824034,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3197836405","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98795146,0.00045870105,0.000100157886,0.011136072,0.00008892209,0.00020501253,0.0000062712024,0.000006466447,0.00004692559],"genre_scores_gemma":[0.99503237,0.000043659093,0.0025840611,0.0020937445,0.00011477192,0.0000047239314,0.000022658432,0.000011853119,0.00009216805],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99810344,0.00028434108,0.0010076701,0.00016931574,0.0003028087,0.0001324386],"domain_scores_gemma":[0.9978853,0.00033005927,0.0003186314,0.00025201502,0.00055269717,0.0006613153],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00078999903,0.00009606114,0.00036391843,0.00011102835,0.0000390427,0.000022574648,0.00006779474,0.00005536879,0.00003424962],"category_scores_gemma":[0.002603594,0.00007680313,0.00009215246,0.00029582367,0.00009807247,0.00013745471,0.000025713623,0.0002867774,0.000009539338],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.014966605,0.0009797682,0.9729072,0.00003483522,0.00008830049,0.0002308435,0.00016223054,0.000047887224,0.0012098656,0.00009160885,0.00025980454,0.00902107],"study_design_scores_gemma":[0.0037082562,0.0012148878,0.99281526,0.00042504922,0.00015107515,0.000025448122,0.00006392469,0.00003506938,0.00013621229,0.0006267219,0.0007149843,0.00008308746],"about_ca_topic_score_codex":0.0000041197504,"about_ca_topic_score_gemma":0.0000026999642,"teacher_disagreement_score":0.019908102,"about_ca_system_score_codex":0.000051354386,"about_ca_system_score_gemma":0.00094616815,"threshold_uncertainty_score":0.31319407},"labels":[],"label_agreement":null},{"id":"W3197908941","doi":"10.1172/jci150143","title":"Inherited human c-Rel deficiency disrupts myeloid and lymphoid immunity to multiple infectious agents","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Cancer Institute; Sidra Medicine; National Health and Medical Research Council; National Institute of Allergy and Infectious Diseases; NSW Ministry of Health; Medical Research Council; Canadian Institutes of Health Research; National Institutes of Health; Institut National de la Santé et de la Recherche Médicale; Agence Nationale de la Recherche; Hospital for Sick Children; US-UK Fulbright Commission; St. Giles Foundation","keywords":"Immunology; Biology; Myeloid; Innate lymphoid cell; T cell; CD8; Cytotoxic T cell; Acquired immune system; CD86; Immunity; Antigen; Immune system; Genetics; In vitro","score_opus":0.06845582114287183,"score_gpt":0.35827299584232297,"score_spread":0.2898171746994511,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3197908941","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939018,0.0004697112,0.0003539969,0.00071624084,0.0040837266,0.00008348025,0.0000013527957,0.00002883289,0.0003608654],"genre_scores_gemma":[0.99626845,0.00015425957,0.00017678192,0.0018313876,0.00011137947,0.00000221038,0.00003511905,0.000013547972,0.0014068455],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9977987,0.0006450525,0.0011735723,0.00016493392,0.00006571219,0.00015203613],"domain_scores_gemma":[0.998263,0.00039911421,0.00060937926,0.00016755913,0.0004756478,0.00008528658],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00097509084,0.000118646545,0.00034017506,0.00012559704,0.00023718523,0.000039796214,0.00009648951,0.00023498481,0.00020670018],"category_scores_gemma":[0.0035525402,0.00010619875,0.00015172672,0.0002154651,0.0001608207,0.00026287074,0.00007329907,0.00057391747,0.000120655044],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002143772,0.00042335675,0.23479936,0.00002075589,0.00013131609,0.000012661052,0.0007472305,0.000040601055,0.74488306,0.00018539319,0.010287278,0.008254642],"study_design_scores_gemma":[0.0037982892,0.0011316718,0.8580595,0.00015860115,0.000101244725,0.0007543503,0.00045911229,0.000048877282,0.0877133,0.0007317014,0.046820052,0.00022329518],"about_ca_topic_score_codex":0.000088987705,"about_ca_topic_score_gemma":0.000040935327,"teacher_disagreement_score":0.65716976,"about_ca_system_score_codex":0.000050223025,"about_ca_system_score_gemma":0.00013421403,"threshold_uncertainty_score":0.43306595},"labels":[],"label_agreement":null},{"id":"W3198585586","doi":"10.1172/jci151788","title":"Convalescent plasma associates with reduced mortality and improved clinical trajectory in patients hospitalized with COVID-19","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"COVID-19 Clinical Research Studies","field":"Medicine","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Daiichi Sankyo Europe; Moderna; Jounce Therapeutics; Centers for Disease Control and Prevention; AstraZeneca; HCA Healthcare; McGill University; Johns Hopkins University; Pfizer","keywords":"Medicine; Concomitant; Hazard ratio; Internal medicine; Retrospective cohort study; Coronavirus disease 2019 (COVID-19); Cohort study; Risk of mortality; Emergency medicine; Disease; Confidence interval; Infectious disease (medical specialty)","score_opus":0.14799395162123213,"score_gpt":0.4777000822642382,"score_spread":0.3297061306430061,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3198585586","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98797613,0.000056664034,0.000081526734,0.011052328,0.00025429545,0.0005148032,0.000010147544,0.00001882649,0.000035247584],"genre_scores_gemma":[0.99101394,0.0007686161,0.0025306237,0.0052184225,0.00033344535,0.000009162028,0.000019329133,0.000024343433,0.00008211246],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9938295,0.0012479876,0.0030344308,0.00050452584,0.0010537643,0.00032979823],"domain_scores_gemma":[0.97838813,0.014689593,0.002416234,0.0004586301,0.0020645906,0.001982834],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.006926059,0.00023191606,0.001521168,0.00012107941,0.0000786828,0.000044295604,0.0001276885,0.00030597695,0.000026614845],"category_scores_gemma":[0.1904749,0.00015363362,0.00028575092,0.0004034466,0.0011552924,0.0002182252,0.00009336988,0.0015167337,0.0000019489069],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0036404033,0.0011973417,0.9921001,0.00026561928,0.0005393014,0.00022597612,0.00015064128,0.000021184853,0.0000937264,0.000019253368,0.00033713668,0.0014093023],"study_design_scores_gemma":[0.023011098,0.005913509,0.96847564,0.00051998853,0.00038515092,0.0000075489224,0.0000795287,0.00047345375,0.00016444964,0.00035074138,0.00044685352,0.0001720192],"about_ca_topic_score_codex":0.000063564294,"about_ca_topic_score_gemma":0.000103758684,"teacher_disagreement_score":0.18354884,"about_ca_system_score_codex":0.00028594513,"about_ca_system_score_gemma":0.0047002793,"threshold_uncertainty_score":0.8338093},"labels":[],"label_agreement":null},{"id":"W3198689752","doi":"10.1172/jci153285","title":"CREBH normalizes dyslipidemia and halts atherosclerosis in diabetes by decreasing circulating remnant lipoproteins","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Lipid metabolism and disorders","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Robarts Clinical Trials; Western University","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; American Diabetes Association; American Heart Association; Novo Nordisk; University of Washington; National Institutes of Health","keywords":"Hypertriglyceridemia; Dyslipidemia; Apolipoprotein B; Pathogenesis; Diabetes mellitus; Cholesterol; Lipoprotein; Apolipoprotein E","score_opus":0.05760651148398602,"score_gpt":0.3491855575332442,"score_spread":0.2915790460492582,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3198689752","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939973,0.0022386014,0.00018390485,0.0029715688,0.0003615501,0.00010808168,0.0000020320465,0.000009462547,0.00012753483],"genre_scores_gemma":[0.9844446,0.0007352317,0.011884233,0.002270591,0.00059773755,0.000002079243,0.000009862604,0.000017381648,0.00003826516],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9973574,0.000344872,0.0015728546,0.00019300294,0.00033450144,0.00019733094],"domain_scores_gemma":[0.99781966,0.0006444335,0.0007474169,0.00014671139,0.00026407719,0.0003776878],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0023739515,0.00012187672,0.0006527538,0.00008561878,0.00005270205,0.00004278788,0.00005246707,0.00018177318,0.000022783146],"category_scores_gemma":[0.01147779,0.000099495235,0.0001574057,0.0002509588,0.00015922764,0.0003219572,0.000032936412,0.00047993526,0.0000017674059],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044387183,0.00011785419,0.93219763,0.0000821321,0.000040143528,0.000009929238,0.00022070433,0.000009660802,0.049937766,0.00009734759,0.00043535331,0.016807117],"study_design_scores_gemma":[0.0037349588,0.00022990514,0.96987575,0.0012804286,0.00017603154,0.000037187896,0.0002558824,0.0011563763,0.018199971,0.0035729136,0.0013347365,0.00014588352],"about_ca_topic_score_codex":0.000051037736,"about_ca_topic_score_gemma":0.000022411463,"teacher_disagreement_score":0.03767812,"about_ca_system_score_codex":0.000025224403,"about_ca_system_score_gemma":0.00032845078,"threshold_uncertainty_score":0.99684894},"labels":[],"label_agreement":null},{"id":"W3202259720","doi":"10.1172/jci152386","title":"Age-dependent impact of the major common genetic risk factor for COVID-19 on severity and mortality","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"COVID-19 Clinical Research Studies","field":"Medicine","cited_by":124,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Cilag; National Institute of Diabetes and Digestive and Kidney Diseases; Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; National Institutes of Health; Grifols; Junta de Castilla y León; National Center for Advancing Translational Sciences; Consejo Superior de Investigaciones Científicas; Regione Toscana; Science for Life Laboratory; Fonds Léon Fredericq; Magnus Bergvalls Stiftelse; Norges Forskningsråd; NordForsk; Vetenskapsrådet; Technische Universität München; Ministero della Salute; Fonds Erasme; Fonds De La Recherche Scientifique - FNRS; King's College London; Jewish General Hospital; Public Health Agency of Canada; Bundesministerium für Bildung und Forschung; Helsingin Yliopisto; European Commission; Cancer Research UK; Deutsche Forschungsgemeinschaft; McGill University; Dipartimenti di Eccellenza; Fondazione IRCCS Ca' Granda Ospedale Maggiore Policlinico; Ministero dell’Istruzione, dell’Università e della Ricerca; ViiV Healthcare; Humanitas University; Public Health Agency; Japan Society for the Promotion of Science; GlaxoSmithKline; Biogen; Instituto de Salud Carlos III; Waalse Gewest; Università degli Studi di Siena; Associazione Italiana per la Ricerca sul Cancro; Eli Lilly and Company","keywords":"Odds ratio; Risk factor; Respiratory failure; Allele; Case-control study; Odds; Risk of mortality; Genetic predisposition; Respiratory system","score_opus":0.22704685058319835,"score_gpt":0.5363378615330497,"score_spread":0.3092910109498514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3202259720","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9905752,0.00013758287,0.0005868485,0.007865156,0.0002455697,0.00042487195,0.0001424102,0.0000063071893,0.00001603071],"genre_scores_gemma":[0.9953974,0.0006455578,0.00087203126,0.0026166248,0.0003639854,0.0000043980963,0.000002873597,0.000011429194,0.000085733314],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99616235,0.0008889448,0.0017738251,0.00023014151,0.0007679846,0.00017676261],"domain_scores_gemma":[0.98147064,0.0154076265,0.0013851469,0.00039461235,0.0006268938,0.00071505044],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0035698486,0.00013531987,0.00082516175,0.000053265165,0.00011977593,0.000023651255,0.00015277168,0.0001674429,0.000055464432],"category_scores_gemma":[0.22313288,0.000078468634,0.0007401877,0.00017249369,0.0006148183,0.00006464228,0.00012995346,0.000855826,0.0000011302462],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006895954,0.00029171974,0.99022627,0.00031687264,0.00053470617,0.0000463106,0.00015196283,0.00027839732,0.000811769,0.00002395627,0.00056524866,0.0060632024],"study_design_scores_gemma":[0.0030175475,0.0016294821,0.98235625,0.00015627517,0.00039016534,0.000009507831,0.00002723694,0.00077114353,0.00090732443,0.010314254,0.00035271855,0.00006810169],"about_ca_topic_score_codex":0.00017435853,"about_ca_topic_score_gemma":0.00013106836,"teacher_disagreement_score":0.21956302,"about_ca_system_score_codex":0.00018511139,"about_ca_system_score_gemma":0.0020588245,"threshold_uncertainty_score":0.783411},"labels":[],"label_agreement":null},{"id":"W3203824213","doi":"10.1172/jci152310","title":"Trivalent nucleoside-modified mRNA vaccine yields durable memory B cell protection against genital herpes in preclinical models","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Acuitas Therapeutics (Canada)","funders":"National Institute of Allergy and Infectious Diseases; National Cancer Institute; National Institutes of Health; Perelman School of Medicine, University of Pennsylvania; Center for AIDS Research, University of Washington; University of Pennsylvania; National Institute of Neurological Disorders and Stroke; BioNTech","keywords":"Titer; Immunization; Immune system; Antibody; Antigen; Sex organ; Messenger RNA; Immunity","score_opus":0.1411948163975165,"score_gpt":0.3809080664430161,"score_spread":0.23971325004549962,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3203824213","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9909997,0.00035938327,0.0008250989,0.002388677,0.0010134856,0.0004689972,0.0000032333128,0.000026830761,0.0039145844],"genre_scores_gemma":[0.9938494,0.0007648192,0.0029561373,0.00086211815,0.0008385085,0.000023754415,0.000011158651,0.000027388827,0.00066673465],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9959896,0.0004763726,0.0025511652,0.00030904045,0.00044726234,0.00022655632],"domain_scores_gemma":[0.99728596,0.00042886345,0.00090956024,0.00028684628,0.000686453,0.0004022959],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019469067,0.0001906717,0.00078357075,0.00019313654,0.00007965554,0.000041125822,0.00008138381,0.00040810904,0.000059656162],"category_scores_gemma":[0.002859734,0.00015682036,0.0004699756,0.00040841696,0.00007191392,0.00035272416,0.000037401238,0.00093965535,0.000022871756],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006267196,0.019328225,0.15692843,0.0008024057,0.0016476858,0.0026475417,0.0008040229,0.033270556,0.011077763,0.00050004164,0.008048462,0.75867766],"study_design_scores_gemma":[0.0887407,0.008441208,0.5667292,0.0037146823,0.0025556295,0.0010646145,0.00088001514,0.09875782,0.1722296,0.03091377,0.024470324,0.0015024787],"about_ca_topic_score_codex":0.000046531684,"about_ca_topic_score_gemma":0.00006447497,"teacher_disagreement_score":0.7571752,"about_ca_system_score_codex":0.00014461896,"about_ca_system_score_gemma":0.00065915124,"threshold_uncertainty_score":0.6394949},"labels":[],"label_agreement":null},{"id":"W3208032032","doi":"10.1172/jci146915","title":"Dual role of allele-specific DNA hypermethylation within the TERT promoter in cancer","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; University of Toronto; University Health Network; SickKids Foundation; Princess Margaret Cancer Centre; Toronto Western Hospital; Hospital for Sick Children","funders":"National Institute of General Medical Sciences; National Cancer Institute; Canadian Cancer Society Research Institute; Canadian Institutes of Health Research; Universität Innsbruck; Brain Tumour Charity","keywords":"DNA methylation; Promoter; Allele; Biology; Methylation; Cancer research; Gene; Cancer; Molecular biology; Genetics; Gene expression","score_opus":0.10170227446877773,"score_gpt":0.378755792079373,"score_spread":0.27705351761059527,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3208032032","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9911778,0.001210109,0.000037710237,0.0068913726,0.00040874205,0.0001254078,0.0000020135985,0.000004916194,0.00014191287],"genre_scores_gemma":[0.9958702,0.0004915544,0.00201474,0.00073322706,0.000744852,0.0000026489474,0.000007699808,0.0000112127,0.0001238778],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9973351,0.00033355269,0.0016191336,0.00014714919,0.00045325534,0.00011180948],"domain_scores_gemma":[0.9979229,0.00037328823,0.0008886402,0.0001871944,0.00048824446,0.00013972829],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017780183,0.00009436766,0.00044902522,0.00008859564,0.000029200499,0.000015585712,0.000081739,0.0001390413,0.00008201518],"category_scores_gemma":[0.001491346,0.000060821905,0.00015971207,0.0003124301,0.00020684754,0.0001745283,0.000020361436,0.00056261756,0.000003718797],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005533813,0.00046440566,0.67767084,0.000089231624,0.000115302035,0.00013851006,0.0027214012,0.0002068941,0.27145877,0.00054941827,0.0010133209,0.045018535],"study_design_scores_gemma":[0.0017063017,0.0003570752,0.89497095,0.00046385638,0.00007501479,0.00014372011,0.0005680822,0.0009445489,0.09484171,0.003034816,0.002807021,0.00008688067],"about_ca_topic_score_codex":0.000027529006,"about_ca_topic_score_gemma":0.00006547826,"teacher_disagreement_score":0.21730015,"about_ca_system_score_codex":0.00004103945,"about_ca_system_score_gemma":0.0005861913,"threshold_uncertainty_score":0.24802452},"labels":[],"label_agreement":null},{"id":"W3211273620","doi":"10.1172/jci153606","title":"CDKL5 deficiency disorder: a pathophysiology of neural maintenance","year":2021,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Genetics and Neurodevelopmental Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Discovery Centre","funders":"Simons Initiative for the Developing Brain","keywords":"Rett syndrome; Neuroscience; Pathophysiology; Genetic disorder; Intervention (counseling); Biology; Bioinformatics; Medicine; Psychology; Genetics; Psychiatry; Endocrinology; Gene","score_opus":0.03653298499632493,"score_gpt":0.3075129049238657,"score_spread":0.2709799199275408,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3211273620","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9085212,0.002003873,0.0005619463,0.08708693,0.0015375875,0.00013085955,0.000024711631,0.0000024819158,0.00013046566],"genre_scores_gemma":[0.5236164,0.0064887526,0.0062796767,0.4604347,0.0017628702,0.000007846571,0.00056995096,0.00008636177,0.00075345335],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9971529,0.00037534148,0.0016291784,0.0003220188,0.00030356538,0.00021697626],"domain_scores_gemma":[0.99734277,0.00009933929,0.0017227998,0.0002810278,0.00046750804,0.000086536595],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004861994,0.00021154297,0.00059862586,0.00006926314,0.00003285015,0.000014185601,0.00034186372,0.00068961346,0.000014916417],"category_scores_gemma":[0.0012434733,0.00018088185,0.00047876238,0.000118901575,0.00033732285,0.000004835248,0.00012057125,0.00094024045,0.000002010058],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012477532,0.00018146334,0.008133783,0.0002544314,0.00014953224,0.00013077725,0.00004075184,0.00030147316,0.16431783,0.000023433633,0.81716406,0.009177679],"study_design_scores_gemma":[0.004503237,0.007190676,0.23698351,0.0007005573,0.00043877153,0.00031127397,0.00016479964,0.0003762425,0.020626506,0.016677003,0.71060157,0.001425857],"about_ca_topic_score_codex":0.0000044319245,"about_ca_topic_score_gemma":0.0000052056016,"teacher_disagreement_score":0.38490477,"about_ca_system_score_codex":0.0000070067276,"about_ca_system_score_gemma":0.00047221547,"threshold_uncertainty_score":0.7376148},"labels":[],"label_agreement":null},{"id":"W3211329272","doi":"10.1172/jci154699","title":"Deprogram and reprogram to solve the riddle of insulin resistance","year":2021,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Heart and Stroke Foundation; Hospital for Sick Children; University of Toronto","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Heart and Stroke Foundation of Canada","keywords":"Induced pluripotent stem cell; Insulin resistance; Insulin; Epigenetics; Biology; Population; Basal (medicine); Cell biology; Bioinformatics; Endocrinology; Internal medicine; Genetics; Embryonic stem cell; Medicine; Gene","score_opus":0.11255427241093617,"score_gpt":0.3760682153526361,"score_spread":0.26351394294169994,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3211329272","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.35601512,0.0026883194,0.0001512279,0.6392206,0.00074711174,0.0003682197,0.0000063866337,0.000013477704,0.0007895232],"genre_scores_gemma":[0.017447978,0.000972748,0.04878896,0.919269,0.010101982,0.000021515485,0.00008129339,0.000053103882,0.0032633978],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99686813,0.00024894628,0.0019005573,0.0002380405,0.0005893651,0.000154978],"domain_scores_gemma":[0.99543536,0.0015573873,0.0015489664,0.00039346292,0.0008325211,0.00023230589],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0023111764,0.00015656317,0.0009485042,0.00010582628,0.00004023478,0.00004186653,0.00011881913,0.0004986868,0.000032728705],"category_scores_gemma":[0.012076536,0.00009802173,0.0003469537,0.00029395227,0.00037239888,0.00006323219,0.000039939194,0.0017303312,0.0000052148766],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027553042,0.00010969387,0.021422949,0.00042637406,0.00035653872,0.0001507635,0.00012919639,0.0000018581944,0.00024929087,0.00008273745,0.960569,0.016226057],"study_design_scores_gemma":[0.0016523118,0.001223136,0.04134124,0.0022209326,0.00077612844,0.00009344405,0.000085801614,0.00003111246,0.0011687017,0.0025569643,0.94870484,0.0001453954],"about_ca_topic_score_codex":0.0000066165694,"about_ca_topic_score_gemma":0.000002883976,"teacher_disagreement_score":0.33856714,"about_ca_system_score_codex":0.000024890222,"about_ca_system_score_gemma":0.000486995,"threshold_uncertainty_score":0.99624515},"labels":[],"label_agreement":null},{"id":"W3213661748","doi":"10.1172/jci144871","title":"Folliculin impairs breast tumor growth by repressing TFE3-dependent induction of the Warburg effect and angiogenesis","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Renal cell carcinoma treatment","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Fonds de Recherche du Québec - Santé; Terry Fox Research Institute; Canadian Institutes of Health Research; McGill University Health Centre; Genome Canada; Cancer Research Society; Terry Fox Foundation; Deutsches Krebsforschungszentrum; McGill University","keywords":"Folliculin; Warburg effect; Angiogenesis; AMPK; Anaerobic glycolysis; TFE3; Cancer; Suppressor; Tumor progression","score_opus":0.03735209683478685,"score_gpt":0.32401216258102694,"score_spread":0.2866600657462401,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3213661748","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951078,0.0012546325,0.000044304114,0.0029670754,0.00037152818,0.00016901102,0.000004635868,0.0000060106236,0.00007499892],"genre_scores_gemma":[0.99835956,0.000116246076,0.0007856761,0.0002589381,0.00036299165,0.000002428765,0.0000057070324,0.000013725338,0.00009470884],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974523,0.00058541965,0.0011607612,0.00018874959,0.00050359825,0.000109137036],"domain_scores_gemma":[0.99756896,0.00045585498,0.0010873133,0.0002151238,0.00043807225,0.00023467958],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015856407,0.00012439254,0.00053669896,0.000056443496,0.000055697965,0.000021283977,0.00006544388,0.00011320281,0.000015146244],"category_scores_gemma":[0.0017697959,0.00007410405,0.00037859997,0.00021455469,0.00018662412,0.00014522758,0.000046099587,0.00031450743,0.0000010492683],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042134375,0.00021554662,0.8049789,0.0001498382,0.0002985268,0.00012670225,0.000107025306,0.000018900444,0.17890617,0.000013216149,0.0011133417,0.0136505095],"study_design_scores_gemma":[0.0017942227,0.00056461414,0.6315678,0.00033739224,0.00056253216,0.0018774568,0.000048198763,0.00006810282,0.36279663,0.00030409003,0.000025529464,0.000053441465],"about_ca_topic_score_codex":0.000031731557,"about_ca_topic_score_gemma":0.0000019297356,"teacher_disagreement_score":0.18389048,"about_ca_system_score_codex":0.000069737944,"about_ca_system_score_gemma":0.00027781277,"threshold_uncertainty_score":0.30218753},"labels":[],"label_agreement":null},{"id":"W3217129431","doi":"10.1172/jci152042","title":"SARS-CoV-2–specific memory B cells can persist in the elderly who have lost detectable neutralizing antibodies","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Medical Research Council; Public Health England; Horizon 2020; National Institute for Health and Care Research; UK Coronavirus Immunology Consortium; UK Research and Innovation; Wellcome Trust; Francis Crick Institute; Cancer Research UK","keywords":"Asymptomatic; Antibody; Cohort; Immunity; Humoral immunity; Immune system; Isotype; Outbreak","score_opus":0.16379623193140794,"score_gpt":0.41788050513165176,"score_spread":0.25408427320024385,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3217129431","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98819816,0.0011042118,0.000040832423,0.0075877286,0.0003703882,0.00018665908,0.0000029693604,0.000007738709,0.0025013094],"genre_scores_gemma":[0.9611072,0.00018355793,0.00064119743,0.037011262,0.00094380305,0.0000025355644,0.000002198187,0.000022424189,0.00008583522],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99647576,0.0006758997,0.0014509341,0.00026768955,0.0007997491,0.00032994564],"domain_scores_gemma":[0.99730086,0.0011363432,0.00051571,0.0003456153,0.0006185015,0.00008298548],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003232873,0.00016918812,0.0006542592,0.00020609854,0.00010846401,0.00014274134,0.0002695236,0.0002124393,0.0000112862035],"category_scores_gemma":[0.001710844,0.00012033276,0.00038308377,0.0004588339,0.0003899254,0.00023807566,0.00004640062,0.0013505607,0.000026713384],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034979713,0.0003706187,0.19587322,0.00018682811,0.0001423421,0.0012634695,0.0029143125,0.00001122322,0.7771733,0.000133144,0.012630316,0.008951439],"study_design_scores_gemma":[0.002610376,0.0010321155,0.054061107,0.0006436377,0.00011843382,0.00032577937,0.0036689297,0.00041567872,0.90638125,0.0013344883,0.029229585,0.00017863128],"about_ca_topic_score_codex":0.00012067946,"about_ca_topic_score_gemma":0.00037613758,"teacher_disagreement_score":0.14181212,"about_ca_system_score_codex":0.00010329904,"about_ca_system_score_gemma":0.00096121314,"threshold_uncertainty_score":0.5867589},"labels":[],"label_agreement":null},{"id":"W3217459667","doi":"10.1172/jci150823","title":"Preexisting memory CD4+ T cells contribute to the primary response in an HIV-1 vaccine trial","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Allergy and Infectious Diseases; Wellcome Trust; National Institutes of Health; Centre Hospitalier Universitaire Vaudois; Brigham and Women's Hospital; Medical Research Council; HIV Vaccine Trials Network","keywords":"Epitope; Priming (agriculture); Modified vaccinia Ankara; Heterologous; Immune system; Vaccination; Vaccinia; Antigen; DNA vaccination","score_opus":0.08704776980235726,"score_gpt":0.3898604170003496,"score_spread":0.3028126471979924,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3217459667","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9869928,0.00060485443,0.00014883566,0.010974651,0.000888608,0.0002937007,0.000028685708,0.000006362922,0.00006150203],"genre_scores_gemma":[0.99577653,0.000076398646,0.00075471343,0.0014864024,0.00043580012,0.000010544457,0.00008777496,0.000009183597,0.0013626211],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99476224,0.003505944,0.0012361851,0.00016927405,0.00010473385,0.00022163277],"domain_scores_gemma":[0.99591726,0.0029447034,0.00043691153,0.00023149622,0.000338936,0.00013069548],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0065228376,0.000093277886,0.00041672695,0.00008761192,0.00009160731,0.000029860352,0.00020028216,0.00017148048,0.00011997942],"category_scores_gemma":[0.007896566,0.00006016787,0.00014372208,0.00019603921,0.00008435091,0.00014732749,0.000063647,0.0006898232,0.00023669185],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.35360813,0.002121467,0.04591903,0.00003301684,0.0005784978,0.000921912,0.0016279883,0.00053814414,0.5028249,0.000098484445,0.044941623,0.04678677],"study_design_scores_gemma":[0.14875388,0.013711672,0.6314425,0.0003616368,0.00019777712,0.0002681773,0.00053913944,0.000042123727,0.13006568,0.00081724726,0.07348382,0.00031634024],"about_ca_topic_score_codex":0.000008225847,"about_ca_topic_score_gemma":0.000052987496,"teacher_disagreement_score":0.5855235,"about_ca_system_score_codex":0.00006968415,"about_ca_system_score_gemma":0.0008000878,"threshold_uncertainty_score":0.94534975},"labels":[],"label_agreement":null},{"id":"W4200227253","doi":"10.1172/jci153876","title":"BACH2 inhibition reverses β cell failure in type 2 diabetes models","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":73,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institutes of Health; National Cancer Institute; Diabetes Research Center; Albert Einstein College of Medicine, Yeshiva University; York University","keywords":"Islet; Type 2 diabetes; Endocrinology; Insulin; Diabetes mellitus; Progenitor cell; Internal medicine; Biology; Cell type; Glucose homeostasis; Cell; Stem cell; Cell biology; Medicine; Insulin resistance","score_opus":0.08555146307972826,"score_gpt":0.3402142870651975,"score_spread":0.25466282398546924,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200227253","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929622,0.00048971357,0.00007952565,0.0039453446,0.00048596534,0.000061134095,0.000001099543,0.000009346874,0.0019656676],"genre_scores_gemma":[0.988561,0.0002936922,0.007153734,0.0030829292,0.00045925032,9.453869e-7,0.000021130483,0.000009373497,0.00041797833],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99822634,0.00020579816,0.0010588133,0.00012413117,0.00027037723,0.000114560484],"domain_scores_gemma":[0.9982958,0.00044937595,0.0004374949,0.00012138352,0.0004799663,0.00021597446],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010135912,0.000081160804,0.00043439132,0.00010876174,0.00001922435,0.00001791924,0.000027855911,0.00015826042,0.00015750989],"category_scores_gemma":[0.0033755829,0.00006699438,0.00015057986,0.0003270704,0.00007676314,0.00029633657,0.000014006213,0.00041679177,0.000024984292],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003618377,0.00082688767,0.80922675,0.00035169558,0.00012359621,0.0002321129,0.00031871037,0.0011270316,0.13129605,0.0009819313,0.05077524,0.0043781386],"study_design_scores_gemma":[0.018454537,0.0033801983,0.4725458,0.004123627,0.00089059165,0.0001559085,0.0013830105,0.020225441,0.37999827,0.08256305,0.01568867,0.00059090636],"about_ca_topic_score_codex":0.000001919812,"about_ca_topic_score_gemma":0.0000034242944,"teacher_disagreement_score":0.33668095,"about_ca_system_score_codex":0.000036405374,"about_ca_system_score_gemma":0.0004071952,"threshold_uncertainty_score":0.4041132},"labels":[],"label_agreement":null},{"id":"W4205523133","doi":"10.1172/jci136227","title":"The multifaceted nature of HIV latency","year":2020,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":95,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal","funders":"Fonds de Recherche du Québec - Santé; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Styrelsen för Internationellt Utvecklingssamarbete","keywords":"Virus latency; Virology; Biology; Viral replication; Human immunodeficiency virus (HIV); Latency (audio); Latent Virus; Virus; Genome; Antiretroviral therapy; Immunology; Viral load; Genetics; Gene; Computer science","score_opus":0.12223615851477383,"score_gpt":0.44155956335161284,"score_spread":0.319323404836839,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205523133","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00025744317,0.9972888,0.0000062668782,0.0010517056,0.0009379756,0.0002772279,0.000060740953,0.0000058553187,0.00011394965],"genre_scores_gemma":[0.00032920745,0.99854034,0.00017576492,0.00004714797,0.00020393835,0.000004847891,0.00013159621,0.000014235774,0.00055294856],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.995725,0.0015324183,0.0023062204,0.00015153579,0.0001099846,0.0001748402],"domain_scores_gemma":[0.9938162,0.0030115917,0.002553468,0.00021065623,0.00031105638,0.0000970429],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0016560041,0.00018400642,0.0015638133,0.00007478556,0.000093575334,0.000014592419,0.0004327594,0.0009359174,0.00006257559],"category_scores_gemma":[0.0055891722,0.00008973206,0.0009108108,0.00019487402,0.000506179,0.00005885756,0.000062778825,0.0027202247,0.00044979536],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007015816,0.00007714318,0.00021289902,0.0006355508,0.0013114712,0.000025908785,0.000035778972,2.1384975e-7,0.00002116385,0.00017294151,0.015913831,0.9815229],"study_design_scores_gemma":[0.00069378386,0.00043812612,0.00024284195,0.0024282755,0.00054748036,0.00006944207,0.0000132935,8.394832e-7,0.000048923015,0.0002413796,0.9952048,0.000070817936],"about_ca_topic_score_codex":0.0000020493853,"about_ca_topic_score_gemma":0.000001608528,"teacher_disagreement_score":0.9814521,"about_ca_system_score_codex":0.000032758602,"about_ca_system_score_gemma":0.0010281502,"threshold_uncertainty_score":0.99958056},"labels":[],"label_agreement":null},{"id":"W4205838182","doi":"10.1172/jci142338","title":"JAGGED1/NOTCH3 activation promotes aortic hypermuscularization and stenosis in elastin deficiency","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Williams Syndrome Research","field":"Neuroscience","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"National Center for Advancing Translational Sciences; Canadian Institutes of Health Research; March of Dimes Foundation; Yale University; National Institutes of Health; National Heart, Lung, and Blood Institute; Heart and Stroke Foundation of Canada; National Institute of Neurological Disorders and Stroke; American Heart Association","keywords":"Elastin; Supravalvular aortic stenosis; JAG1; Aorta; Notch signaling pathway; Vascular smooth muscle; Downregulation and upregulation; Phenotype","score_opus":0.13803040536157357,"score_gpt":0.38460582894342166,"score_spread":0.24657542358184809,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205838182","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961131,0.000027153315,0.00045063513,0.0028415867,0.00024414613,0.00022460481,0.0000018195237,0.00001152269,0.00008543931],"genre_scores_gemma":[0.99873143,0.00006202658,0.00071476423,0.00034044517,0.00008563915,0.000011498527,0.0000019777035,0.000013865275,0.0000383483],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9961028,0.0012733655,0.0012457181,0.00026223168,0.0009206419,0.00019526141],"domain_scores_gemma":[0.9973671,0.0014223749,0.0007906684,0.00013357819,0.00012587824,0.00016039192],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.003491181,0.00009429871,0.00027372377,0.0003381613,0.00018859396,0.000063445936,0.00022734402,0.00007117204,0.000055141023],"category_scores_gemma":[0.015427382,0.000085764594,0.00007771243,0.000889395,0.00019906425,0.00061539724,0.00012077239,0.00081575086,0.0000046065734],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013706763,0.00073246146,0.5556932,0.00009307184,0.00000887758,0.00004220452,0.0007297222,0.0026521801,0.41958767,0.001330368,0.00014606479,0.018847093],"study_design_scores_gemma":[0.0016384184,0.0014491249,0.9144287,0.00014052645,0.000024868985,0.0001274636,0.00018699223,0.019237876,0.049670946,0.012709144,0.00018787768,0.00019805269],"about_ca_topic_score_codex":0.000012859282,"about_ca_topic_score_gemma":0.0000012665824,"teacher_disagreement_score":0.36991674,"about_ca_system_score_codex":0.00010540122,"about_ca_system_score_gemma":0.00029463382,"threshold_uncertainty_score":0.9928661},"labels":[],"label_agreement":null},{"id":"W4206120828","doi":"10.1172/jci200215883","title":"EphB6 crosslinking results in costimulation of T cells","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Axon Guidance and Neuronal Signaling","field":"Neuroscience","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Notre-Dame; Centre Hospitalier de l’Université de Montréal","funders":"Canadian Institutes of Health Research; Heart And Stroke Foundation Of Quebec; Roche Organ Transplant Research Foundation; Kidney Foundation of Canada; Heart and Stroke Foundation of Canada","keywords":"CD28; T cell; Biology; T-cell receptor; Cell biology; Molecular biology; Immunology; Immune system","score_opus":0.27908655831452694,"score_gpt":0.4060633871174051,"score_spread":0.12697682880287814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206120828","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977353,0.000041148185,0.00029579914,0.0008439417,0.00047825326,0.00007805113,0.0000027311778,0.0000060647462,0.0005187099],"genre_scores_gemma":[0.99773395,0.00014934083,0.00087529526,0.0009104698,0.00027569628,3.8541748e-7,3.54618e-7,0.0000065296804,0.000047954225],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9966168,0.0003720273,0.0022731065,0.00016791931,0.0004431261,0.00012705967],"domain_scores_gemma":[0.9955531,0.002328279,0.0017636492,0.00011127575,0.0001355077,0.00010822762],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019041692,0.00007952439,0.00031247502,0.00013499125,0.000039603892,0.00002160311,0.00018100369,0.00010697739,0.000027781673],"category_scores_gemma":[0.008039328,0.00006909807,0.00013281392,0.00033936862,0.0001836912,0.00040490337,0.000021398919,0.0004390861,0.00001548444],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047256678,0.00028400787,0.029091444,0.000031018535,0.000005611021,0.00007167584,0.0006240303,0.02549227,0.923839,0.00055546407,0.0010159287,0.018516986],"study_design_scores_gemma":[0.003277929,0.00074404036,0.04800917,0.0004592251,0.00001964962,0.000021598687,0.000019578169,0.054219224,0.8850076,0.006685287,0.001385204,0.00015146604],"about_ca_topic_score_codex":0.0000041885523,"about_ca_topic_score_gemma":0.0000020657008,"teacher_disagreement_score":0.038831364,"about_ca_system_score_codex":0.000020168087,"about_ca_system_score_gemma":0.000045955425,"threshold_uncertainty_score":0.9624407},"labels":[],"label_agreement":null},{"id":"W4206210836","doi":"10.1172/jci153397","title":"Androgen receptor signaling promotes Treg suppressive function during allergic airway inflammation","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"IL-33, ST2, and ILC Pathways","field":"Immunology and Microbiology","cited_by":77,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Prevention of Organ Failure","funders":"National Center for Advancing Translational Sciences; National Institute of General Medical Sciences; National Cancer Institute; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; National Institute of Allergy and Infectious Diseases; Vanderbilt University Medical Center; Vanderbilt University; U.S. Department of Veterans Affairs","keywords":"FOXP3; Androgen receptor; Eosinophil; Allergic inflammation; Signal transduction; Inflammation; Receptor; Airway","score_opus":0.04380437728580577,"score_gpt":0.2877971410220952,"score_spread":0.24399276373628942,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206210836","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960376,0.00037105638,0.00013073359,0.0005816151,0.0024232336,0.00018516426,0.000077188364,0.000033533765,0.00015987294],"genre_scores_gemma":[0.9980083,0.000074198724,0.00025309445,0.00013959702,0.00067731185,0.0000139064405,0.00014826255,0.000017666513,0.0006676673],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99688727,0.0010538861,0.001483137,0.00020712489,0.00015401961,0.00021457863],"domain_scores_gemma":[0.9975022,0.00037874133,0.0016023996,0.00014182349,0.00030654814,0.00006827783],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018758099,0.0001475379,0.00041163625,0.00016708169,0.00046174906,0.000023790142,0.00019523955,0.00021579572,0.0005585185],"category_scores_gemma":[0.001250304,0.000131723,0.00023115089,0.00021223327,0.00015835348,0.00040096717,0.000076992575,0.00091355474,0.000074218784],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010803138,0.00014744606,0.010279695,0.000047490666,0.000335961,0.000012680457,0.0014258798,0.0010285183,0.97726965,0.00031781176,0.0039702244,0.004084315],"study_design_scores_gemma":[0.0063057453,0.0032768631,0.021812946,0.00019273337,0.00028063942,0.00029088935,0.0012634142,0.000111250745,0.89062697,0.005279672,0.07013456,0.00042430774],"about_ca_topic_score_codex":0.000005874074,"about_ca_topic_score_gemma":0.000002903498,"teacher_disagreement_score":0.08664268,"about_ca_system_score_codex":0.00007408058,"about_ca_system_score_gemma":0.00029221515,"threshold_uncertainty_score":0.61153865},"labels":[],"label_agreement":null},{"id":"W4206485610","doi":"10.1172/jci149473","title":"ATP11B inhibits breast cancer metastasis in a mouse model by suppressing externalization of nonapoptotic phosphatidylserine","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"ATP Synthase and ATPases Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre","funders":"Fundo para o Desenvolvimento das Ciências e da Tecnologia; Zhejiang University; Faculdade de Ciências da Saúde, Universidade de Macau; Universidade de Macau","keywords":"Metastasis; Breast cancer; Cancer; Cancer cell; Phosphatidylserine; Cytotoxic T cell; Phenotype; Paclitaxel; Suppressor","score_opus":0.05541416520638173,"score_gpt":0.38852334427172813,"score_spread":0.33310917906534643,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206485610","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957136,0.000612081,0.0027959184,0.0005691484,0.00007660608,0.00008355434,0.00013411327,0.0000016238185,0.000013389621],"genre_scores_gemma":[0.9977823,0.00052981975,0.0010268358,0.00026184236,0.00011914243,0.0000085433,0.00005171814,0.000015368625,0.00020442475],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99804306,0.00029522923,0.0009875323,0.00015474824,0.00038994887,0.00012950468],"domain_scores_gemma":[0.99881244,0.000050460138,0.0006938699,0.00012263647,0.00020406191,0.00011651204],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011722135,0.0000869241,0.00026594053,0.0000753857,0.000048531998,0.000013014752,0.00017445657,0.000067831796,0.00006695068],"category_scores_gemma":[0.0003085863,0.00008053667,0.00013206356,0.00015685668,0.00010026429,0.000024893629,0.00011773453,0.00025748147,2.765255e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044527068,0.0002528814,0.044377975,0.00003728893,0.00006925088,0.0000033570946,0.000059348145,0.047041204,0.8992803,0.000017885226,0.0014347467,0.006980491],"study_design_scores_gemma":[0.0017032693,0.00044856503,0.004455366,0.00008024323,0.000043545642,0.000014793966,0.000079230136,0.0373776,0.95485145,0.00033326945,0.00047053886,0.0001421572],"about_ca_topic_score_codex":0.000046928635,"about_ca_topic_score_gemma":0.000013571243,"teacher_disagreement_score":0.05557112,"about_ca_system_score_codex":0.000029949704,"about_ca_system_score_gemma":0.00031807445,"threshold_uncertainty_score":0.32841903},"labels":[],"label_agreement":null},{"id":"W4210271223","doi":"10.1172/jci200113712","title":"Glypicans: proteoglycans with a surprise","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Proteoglycans and glycosaminoglycans research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":359,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Toronto; Sunnybrook Health Science Centre","funders":"National Institutes of Health; March of Dimes Foundation","keywords":"Surprise; Medicine; Biology; Psychology; Communication","score_opus":0.06160935707868281,"score_gpt":0.37683067240409834,"score_spread":0.31522131532541553,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210271223","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.991575,0.00022646858,0.0054486217,0.0016435458,0.00014038378,0.0002454059,0.0000034662605,0.000005481322,0.0007116108],"genre_scores_gemma":[0.99033034,0.0004968076,0.0066492613,0.0005852605,0.0010786237,0.000013361792,0.000013668601,0.000022082726,0.00081062136],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99797034,0.00025160075,0.0008959835,0.0002209765,0.0004271281,0.00023399811],"domain_scores_gemma":[0.9982023,0.0000628335,0.00055712747,0.0002777278,0.0005522684,0.00034771653],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015490192,0.0001352153,0.00030353825,0.000083847626,0.00006229481,0.000039969967,0.00028794984,0.00018643106,0.000032163694],"category_scores_gemma":[0.0010914608,0.00009541273,0.00016530365,0.00022476044,0.0003205384,0.000020042358,0.000043807213,0.00038753272,0.0000071458426],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007578329,0.00080998713,0.7605571,0.000056530767,0.00051284494,0.00038079318,0.00014986157,0.0004761833,0.13757017,0.00037252903,0.012191756,0.07934392],"study_design_scores_gemma":[0.013137061,0.027354538,0.3572633,0.0005366261,0.0002139235,0.0020270902,0.00035765363,0.0007114397,0.16094315,0.003098593,0.433282,0.0010746245],"about_ca_topic_score_codex":0.00002727883,"about_ca_topic_score_gemma":0.00010203319,"teacher_disagreement_score":0.42109022,"about_ca_system_score_codex":0.000015242174,"about_ca_system_score_gemma":0.00065942854,"threshold_uncertainty_score":0.38908184},"labels":[],"label_agreement":null},{"id":"W4210539884","doi":"10.1172/jci152930","title":"Metronidazole treatment rapidly reduces genital inflammation through effects on bacterial vaginosis–associated bacteria rather than lactobacilli","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre for Global Health Research; Toronto General Hospital; University Health Network; University of Toronto","funders":"University of Toronto; National Institutes of Health; King's College London; Canadian Institutes of Health Research; National Institute of Allergy and Infectious Diseases; Ontario HIV Treatment Network","keywords":"Lactobacillus crispatus; Bacterial vaginosis; Lactobacillus; Metronidazole; Gardnerella vaginalis; Immune system; Proinflammatory cytokine; Lactobacillus gasseri; Inflammation","score_opus":0.07097287300880298,"score_gpt":0.3653351124324978,"score_spread":0.29436223942369477,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210539884","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933399,0.00017498135,0.000020647021,0.0016194356,0.004099895,0.00040467465,0.00002381676,0.000042714888,0.00027395753],"genre_scores_gemma":[0.9981842,0.00009343884,0.00015182112,0.000081379316,0.00080972665,0.000047983314,0.00015046795,0.000023073322,0.0004579323],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9947913,0.003180774,0.0012419315,0.0003019154,0.00020783767,0.00027619262],"domain_scores_gemma":[0.99667835,0.0014490848,0.0012467055,0.00025321025,0.00030988228,0.00006274748],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022537159,0.00020444897,0.0005633702,0.00021470399,0.00037177853,0.000052272746,0.00021964997,0.00021001515,0.0006087186],"category_scores_gemma":[0.0025856248,0.00016344881,0.00034698794,0.0003133723,0.00023048812,0.00045716684,0.000062556865,0.00089607463,0.00013696498],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014091408,0.00087270676,0.021669531,0.000008855437,0.0010803271,0.000012662672,0.00079690845,0.00015011257,0.95288944,0.00022079675,0.0022224206,0.018667122],"study_design_scores_gemma":[0.004368178,0.007537462,0.2211462,0.00003885516,0.00017783282,0.000062626816,0.00017386943,0.0000072684347,0.74531215,0.0012203037,0.019756263,0.0001989701],"about_ca_topic_score_codex":0.00004475467,"about_ca_topic_score_gemma":0.000008140964,"teacher_disagreement_score":0.20757724,"about_ca_system_score_codex":0.00046362853,"about_ca_system_score_gemma":0.0003421124,"threshold_uncertainty_score":0.6665249},"labels":[],"label_agreement":null},{"id":"W4210833716","doi":"10.1172/jci157124","title":"Streptococcus pneumoniae colonization associates with impaired adaptive immune responses against SARS-CoV-2","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Economic and Social Research Council; School of Medicine, New York University; University College London; National Institute for Health Research Health Protection Research Unit; National Institute for Health and Care Research; York University; Wellcome Trust; University College London Hospitals NHS Foundation Trust; Pfizer","keywords":"Coinfection; Streptococcus pneumoniae; Immune system; Asymptomatic; Immunity; Acquired immune system; Cellular immunity; Respiratory system; Disease; Exacerbation","score_opus":0.09176330780616665,"score_gpt":0.3759521306607322,"score_spread":0.28418882285456554,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210833716","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931497,0.000075711185,0.00011865354,0.00551384,0.00050710817,0.00035299401,0.000015896547,0.00004052496,0.00022554553],"genre_scores_gemma":[0.99647105,0.000043089025,0.00024251461,0.0026796681,0.00033990425,0.000024079474,0.000017474136,0.00002506133,0.00015714583],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99669224,0.0008925116,0.0014438707,0.00017972436,0.00061183266,0.00017983225],"domain_scores_gemma":[0.99654675,0.0006935389,0.00176345,0.00018351673,0.0006473512,0.00016540026],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022171012,0.0001485451,0.00057836395,0.00023559008,0.00033049774,0.00002942331,0.00011618942,0.00012184896,0.000021874464],"category_scores_gemma":[0.0021484885,0.00011415342,0.00027636226,0.00054082414,0.00022940226,0.00022844506,0.000047800942,0.0009551851,0.000006735574],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012831587,0.0006340527,0.6949204,0.000019744783,0.00044891576,0.00021823347,0.0004590178,0.0008408422,0.2972178,0.00011133055,0.0018191433,0.0020273698],"study_design_scores_gemma":[0.0043856525,0.010001892,0.9549359,0.00021615776,0.00041442277,0.00025227683,0.00060816045,0.0013921073,0.018998628,0.00058716466,0.007983453,0.00022415571],"about_ca_topic_score_codex":0.0000072004696,"about_ca_topic_score_gemma":0.000009848473,"teacher_disagreement_score":0.27821916,"about_ca_system_score_codex":0.0002292109,"about_ca_system_score_gemma":0.0011876442,"threshold_uncertainty_score":0.46550414},"labels":[],"label_agreement":null},{"id":"W4210905317","doi":"10.1172/jci154422","title":"The HIV-1 proviral landscape reveals that Nef contributes to HIV-1 persistence in effector memory CD4+ T cells","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":87,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Sydney Medical School Foundation; Sydney Medical School; amfAR, The Foundation for AIDS Research; Medical Research Council; National Institute of Allergy and Infectious Diseases; National Health and Medical Research Council; Australian Centre for HIV and Hepatitis Virology Research; Delaney AIDS Research Enterprise; University of Sydney","keywords":"Effector; Persistence (discontinuity); Memory T cell; Mutation; Memory cell; T cell; Virus","score_opus":0.05333448671185388,"score_gpt":0.3256872831512331,"score_spread":0.2723527964393792,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210905317","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98585933,0.0017103361,0.00002771911,0.010798452,0.00090520154,0.00041325475,0.00008228529,0.000007714812,0.00019570414],"genre_scores_gemma":[0.99697846,0.00008677216,0.0000949377,0.00065689493,0.000084622705,0.000039727056,0.000058697104,0.0000067808182,0.0019931304],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9968102,0.0017459947,0.0008417944,0.00016830515,0.00014157078,0.00029214713],"domain_scores_gemma":[0.99675536,0.0024051198,0.00044712258,0.0001788734,0.00011579918,0.00009772418],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0039863344,0.000107273234,0.00038007592,0.000119448705,0.00030195038,0.00003402287,0.00034336705,0.00009735493,0.00015427145],"category_scores_gemma":[0.0016752903,0.000068542184,0.00019483679,0.00019834939,0.00023298767,0.00009947308,0.00012249053,0.00084958284,0.00044353772],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002803224,0.0006527174,0.642199,0.000033082797,0.0005073627,0.00013830978,0.0009349468,0.0004293961,0.08117574,0.00019002128,0.26048392,0.010452294],"study_design_scores_gemma":[0.015315817,0.006505067,0.7146209,0.0002645614,0.00021616553,0.00018790016,0.0032238127,0.00011015061,0.03811698,0.0013961758,0.21963696,0.00040552192],"about_ca_topic_score_codex":0.000011651114,"about_ca_topic_score_gemma":0.000018905797,"teacher_disagreement_score":0.07242191,"about_ca_system_score_codex":0.0000958783,"about_ca_system_score_gemma":0.000276739,"threshold_uncertainty_score":0.5700928},"labels":[],"label_agreement":null},{"id":"W4212863820","doi":"10.1172/jci200315990","title":"Thyroid functions of mouse cathepsins B, K, and L","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Thyroid Disorders and Treatments","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Shriners Hospitals for Children; McGill University","keywords":"Thyroglobulin; Cathepsin; Cathepsin B; Proteolytic enzymes; Chemistry; Thyroid; Cathepsin D; Cathepsin H; Biochemistry; Molecular biology; Endocrinology; Internal medicine; Biology; Enzyme; Medicine","score_opus":0.0756598671017931,"score_gpt":0.3674383006342089,"score_spread":0.29177843353241584,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4212863820","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99705637,0.0006197029,0.00022365655,0.00081626145,0.00016237916,0.00007160004,0.0000023254145,0.0000038398216,0.0010438858],"genre_scores_gemma":[0.9953169,0.00029327287,0.0031893256,0.00029837995,0.00006829623,6.13423e-7,0.0000025462473,0.0000067258957,0.0008238953],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99887806,0.00008761422,0.0007436136,0.000069239424,0.00016057923,0.000060862134],"domain_scores_gemma":[0.99887097,0.00016891863,0.00048985775,0.000092408016,0.0001913963,0.00018643348],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053393457,0.00005844864,0.00029709842,0.00006604842,0.00002590283,0.0000054141983,0.000021019616,0.0000737223,0.00002175479],"category_scores_gemma":[0.0014841427,0.000041593845,0.00012220771,0.00008872662,0.00014594366,0.00009242761,0.000004599545,0.00017025284,0.000004717426],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022935282,0.0007752582,0.9796972,0.000034119257,0.00024714737,0.000015714973,0.00020785701,0.0000144656715,0.008795317,0.0023259313,0.0042505483,0.003407063],"study_design_scores_gemma":[0.014161381,0.0063665872,0.93627083,0.0002042935,0.00101973,0.00038190707,0.0006728244,0.00010813325,0.017553724,0.014135374,0.00895199,0.00017322077],"about_ca_topic_score_codex":0.0000070179835,"about_ca_topic_score_gemma":0.0000036763067,"teacher_disagreement_score":0.04342639,"about_ca_system_score_codex":0.000010198176,"about_ca_system_score_gemma":0.00016860504,"threshold_uncertainty_score":0.17767647},"labels":[],"label_agreement":null},{"id":"W4213137283","doi":"10.1172/jci148667","title":"Stromal oncostatin M cytokine promotes breast cancer progression by reprogramming the tumor microenvironment","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cytokine Signaling Pathways and Interactions","field":"Medicine","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Centro de Investigación Biomédica en Red de Cáncer; Sociedad Española de Oncología Médica; Ministerio de Ciencia e Innovación; Horizon 2020 Framework Programme; Eusko Jaurlaritza; Instituto de Salud Carlos III; Cancer Institute NSW; Department of Industry, Tourism and Trade; “la Caixa” Foundation; McGill University","keywords":"Oncostatin M; Tumor microenvironment; Stromal cell; Cancer research; Biology; Tumor progression; Cytokine; CXCL1; Reprogramming; Cancer cell; Cancer; Chemokine; Immune system; Immunology; Cell; Interleukin 6","score_opus":0.05346806453403087,"score_gpt":0.38561634642435566,"score_spread":0.3321482818903248,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4213137283","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97464204,0.00032869127,0.000104066734,0.023982469,0.0005166219,0.00031601492,0.00006144542,0.000013879988,0.00003477379],"genre_scores_gemma":[0.9948142,0.00005265187,0.0024288178,0.0016795493,0.00080573105,0.00004266548,0.000029773008,0.000020250469,0.00012633901],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9975004,0.00031213812,0.0012527036,0.0001802692,0.00059779285,0.00015668492],"domain_scores_gemma":[0.99788547,0.00025838285,0.0013367145,0.00017672637,0.00014337219,0.00019931307],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018242024,0.000112348185,0.00032665159,0.000054838612,0.00025618495,0.00003412921,0.00013084777,0.00003367315,0.0004864676],"category_scores_gemma":[0.0004128753,0.000070488306,0.00023918155,0.00016266668,0.00016735279,0.00012606093,0.000071602706,0.0009999995,0.0000030719464],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017540596,0.001846632,0.27031866,0.000068054316,0.0003250376,0.00014204066,0.00069901114,0.00034643227,0.5333207,0.000058657773,0.05639045,0.13473026],"study_design_scores_gemma":[0.009231244,0.01354353,0.48192805,0.001726216,0.0012169121,0.006882689,0.0026683414,0.005074373,0.12744263,0.0008229765,0.34891427,0.0005487508],"about_ca_topic_score_codex":0.000035915364,"about_ca_topic_score_gemma":0.0000023927653,"teacher_disagreement_score":0.4058781,"about_ca_system_score_codex":0.00014888131,"about_ca_system_score_gemma":0.00028108168,"threshold_uncertainty_score":0.5326479},"labels":[],"label_agreement":null},{"id":"W4214883623","doi":"10.1172/jci152170","title":"USP25 inhibition ameliorates Alzheimer’s pathology through the regulation of APP processing and Aβ generation","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; Xiamen University; Natural Science Foundation of Fujian Province; National Natural Science Foundation of China; Wenzhou Medical University","keywords":"Amyloid precursor protein; Pathogenesis; Deubiquitinating enzyme; Trisomy; Chromosome 21; Down syndrome; Regulator; Amyloid (mycology); Alzheimer's disease","score_opus":0.11537186688105582,"score_gpt":0.3596076202585578,"score_spread":0.24423575337750197,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214883623","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949753,0.0019267792,0.0012361329,0.0014416102,0.00020291861,0.00015427048,0.0000054684906,0.0000028466716,0.000054633016],"genre_scores_gemma":[0.99576735,0.00014738465,0.0024353978,0.00077549857,0.00078274816,0.000013642209,0.000057064484,0.000008024132,0.000012908402],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983694,0.000504207,0.00074703764,0.0001263693,0.00018368209,0.000069299254],"domain_scores_gemma":[0.9985806,0.000047101657,0.0010177804,0.00009861375,0.00021780412,0.000038146274],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015421434,0.00006868958,0.00015870883,0.000029065137,0.00015221596,0.000016983622,0.0000690551,0.000091439804,0.000011296417],"category_scores_gemma":[0.00035883347,0.00005221079,0.000072366565,0.000101149686,0.00019936736,0.000027876944,0.000059898917,0.00020816372,3.116087e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015273268,0.000068139496,0.0075850156,0.000022935998,0.000042162665,0.0000019675435,0.00064074487,0.00065696554,0.9605625,0.00068592385,0.0011898429,0.028391061],"study_design_scores_gemma":[0.0017159539,0.002835464,0.068311244,0.000085405656,0.00021555764,0.00030441873,0.0005944932,0.0042607905,0.89005244,0.021756774,0.009627052,0.00024039087],"about_ca_topic_score_codex":0.0000044090903,"about_ca_topic_score_gemma":0.0000041833514,"teacher_disagreement_score":0.07051005,"about_ca_system_score_codex":0.000005621966,"about_ca_system_score_gemma":0.00012233118,"threshold_uncertainty_score":0.21290942},"labels":[],"label_agreement":null},{"id":"W4220670650","doi":"10.1172/jci158468","title":"Training can’t always lead to Olympic macrophages","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune responses and vaccinations","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"Canadian Institutes of Health Research; National Institutes of Health; Bill and Melinda Gates Foundation","keywords":"Transcriptome; Immune system; Innate immune system; Population; Immunity; Macrophage; Inflammation","score_opus":0.11694882780796106,"score_gpt":0.37871549457327536,"score_spread":0.2617666667653143,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220670650","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9878364,0.0008643123,0.00030361497,0.008418076,0.0022072718,0.00010032279,0.00001522848,0.0000146058055,0.00024015916],"genre_scores_gemma":[0.994319,0.000036545145,0.00058668933,0.0022874163,0.00014782153,0.000007512535,0.000015499541,0.000011005817,0.0025885024],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977689,0.00079658546,0.0010508881,0.00012148842,0.00008253525,0.00017962838],"domain_scores_gemma":[0.9983989,0.0006817841,0.0005939507,0.00013001487,0.00013827064,0.00005709693],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021191267,0.000086290485,0.00033014896,0.00017552552,0.00030747228,0.000014742013,0.0002477581,0.0000898497,0.00063127483],"category_scores_gemma":[0.0016100986,0.00007722609,0.0001986932,0.00022537091,0.00007677388,0.000084134546,0.00008759281,0.00066137715,0.00005667179],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019323583,0.00060020236,0.025932202,0.000025699474,0.00080954575,0.000099931596,0.009939275,0.002459608,0.49239832,0.005793528,0.09987312,0.3601362],"study_design_scores_gemma":[0.0074920054,0.0060354094,0.36034375,0.00011350607,0.0002986745,0.0013888578,0.006770989,0.00011902264,0.04294502,0.0065527787,0.56736964,0.0005703646],"about_ca_topic_score_codex":0.000019186116,"about_ca_topic_score_gemma":0.0000066784223,"teacher_disagreement_score":0.4674965,"about_ca_system_score_codex":0.00005603738,"about_ca_system_score_gemma":0.0003980951,"threshold_uncertainty_score":0.6912017},"labels":[],"label_agreement":null},{"id":"W4220752453","doi":"10.1172/jci156125","title":"Aerobic exercise elicits clinical adaptations in myotonic dystrophy type 1 patients independently of pathophysiological changes","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Genetic Neurodegenerative Diseases","field":"Neuroscience","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McMaster University Medical Centre; McMaster Children's Hospital; McMaster University","funders":"Canadian Institutes of Health Research; McMaster University","keywords":"Myotonic dystrophy; Cardiorespiratory fitness; Skeletal muscle; Disease; Clinical trial; Aerobic exercise; Muscular dystrophy; Exercise physiology; Duchenne muscular dystrophy; Neuromuscular disease","score_opus":0.15275745838125093,"score_gpt":0.38041484883668053,"score_spread":0.2276573904554296,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220752453","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99783474,0.00006440676,0.000014160532,0.0003814997,0.0013212351,0.00032418335,0.00002482506,0.000009162972,0.000025755655],"genre_scores_gemma":[0.9977116,0.0003576867,0.0005900403,0.0011008207,0.00016745203,0.00001761942,0.000008045863,0.000016687289,0.000030034465],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.994123,0.002287079,0.0021961238,0.00037032657,0.000819765,0.00020369922],"domain_scores_gemma":[0.9959548,0.0013201922,0.0018585473,0.00023612879,0.00037712915,0.0002532033],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014423424,0.00015409758,0.0006181327,0.00022359773,0.00010714089,0.000017873826,0.00046003138,0.000104476094,0.00009394885],"category_scores_gemma":[0.008088301,0.00013390515,0.000252003,0.0006631773,0.00033784876,0.00014993489,0.00019205807,0.00084769906,0.000009511282],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025816662,0.005739785,0.62265563,0.000057475085,0.000037331083,0.0001136854,0.00051136495,0.01954244,0.3284643,0.0008620694,0.0015735081,0.017860742],"study_design_scores_gemma":[0.0023430723,0.0044770427,0.9470004,0.00006802809,0.00006025326,0.00000524429,0.00008647821,0.0009486775,0.041494884,0.0031976367,0.00015221853,0.0001660564],"about_ca_topic_score_codex":0.000004243074,"about_ca_topic_score_gemma":0.0000051002025,"teacher_disagreement_score":0.32434478,"about_ca_system_score_codex":0.000040427454,"about_ca_system_score_gemma":0.00039321615,"threshold_uncertainty_score":0.9683036},"labels":[],"label_agreement":null},{"id":"W4220833681","doi":"10.1172/jci140685","title":"Macrophage-produced VEGFC is induced by efferocytosis to ameliorate cardiac injury and inflammation","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Phagocytosis and Immune Regulation","field":"Immunology and Microbiology","cited_by":157,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institutes of Health; American Heart Association; National Heart, Lung, and Blood Institute; Foundation for the National Institutes of Health","keywords":"Lymphangiogenesis; Efferocytosis; Vascular endothelial growth factor C; Proinflammatory cytokine; Inflammation; Endothelial dysfunction; Myeloid","score_opus":0.04245550277550015,"score_gpt":0.3334426956146183,"score_spread":0.29098719283911817,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220833681","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932006,0.0009271353,0.00003767032,0.00394111,0.0015932734,0.00023284792,0.00002913057,0.000015086391,0.00002315709],"genre_scores_gemma":[0.9982906,0.00012518009,0.00013833439,0.0009836336,0.00019449512,0.000015914977,0.000048731974,0.00001578811,0.00018731193],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99703556,0.0010474867,0.0013643592,0.00023361974,0.00014324149,0.00017573887],"domain_scores_gemma":[0.9982124,0.00024481263,0.0010268246,0.00020050636,0.0002240241,0.000091433096],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025534094,0.0001443577,0.00052015355,0.00018213446,0.00026669216,0.00003454045,0.00018236504,0.00017689248,0.00012969879],"category_scores_gemma":[0.000783751,0.00013303242,0.00016332521,0.00031148267,0.000097521865,0.00029001746,0.00013995648,0.0006729151,0.000038232974],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036061933,0.00004198875,0.007684862,0.00000930103,0.00012873147,5.586654e-7,0.00042103344,0.00001517803,0.9318003,0.00004498414,0.014641445,0.044851],"study_design_scores_gemma":[0.0013342334,0.001754412,0.10046539,0.000041108313,0.000119882796,0.00001544303,0.00015316955,0.000029376366,0.8648022,0.00070492463,0.030381586,0.00019827494],"about_ca_topic_score_codex":0.000019086317,"about_ca_topic_score_gemma":3.5886046e-7,"teacher_disagreement_score":0.09278052,"about_ca_system_score_codex":0.00007427295,"about_ca_system_score_gemma":0.00013049542,"threshold_uncertainty_score":0.5424905},"labels":[],"label_agreement":null},{"id":"W4220837317","doi":"10.1172/jci152187","title":"The Eph receptor A4 plays a role in demyelination and depression-related behavior","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Axon Guidance and Neuronal Signaling","field":"Neuroscience","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Centre for Addiction and Mental Health","funders":"National Natural Science Foundation of China","keywords":"Erythropoietin-producing hepatocellular (Eph) receptor; Myelin; Ephrin; Gene knockdown; Receptor; Excitatory postsynaptic potential; Hippocampus","score_opus":0.08683182758100577,"score_gpt":0.3669623948683667,"score_spread":0.2801305672873609,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220837317","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972015,0.00026701516,0.000017244827,0.0016861479,0.00061020727,0.00013543548,0.0000021922733,0.000007958354,0.00007230316],"genre_scores_gemma":[0.99855113,0.00022084707,0.00012712713,0.00086456223,0.00014774439,0.000015647776,8.1933416e-7,0.000008968342,0.00006317173],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99719316,0.00086821854,0.0011739274,0.00017107606,0.0004667891,0.00012681501],"domain_scores_gemma":[0.996807,0.0020437206,0.00088938145,0.000084621824,0.0000627169,0.0001125592],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026616596,0.00007230227,0.00017631541,0.00007965053,0.00035327484,0.00003900806,0.00021087589,0.000059579044,0.00004057307],"category_scores_gemma":[0.0051800814,0.000052249026,0.000077881086,0.00027299428,0.0001535988,0.00026552714,0.000089204645,0.0008109954,0.000004301368],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00058923283,0.00032711672,0.36098477,0.000007781973,0.0000101513015,0.00008535712,0.00088178535,0.0025069911,0.53830576,0.002027872,0.0014113475,0.092861824],"study_design_scores_gemma":[0.00504154,0.0016374649,0.7558955,0.00020510097,0.00010216482,0.0003888088,0.0010913317,0.021614777,0.15752338,0.041306555,0.014740561,0.00045283965],"about_ca_topic_score_codex":0.000004399711,"about_ca_topic_score_gemma":0.000002792075,"teacher_disagreement_score":0.39491072,"about_ca_system_score_codex":0.000035499175,"about_ca_system_score_gemma":0.00011640747,"threshold_uncertainty_score":0.62014157},"labels":[],"label_agreement":null},{"id":"W4220994403","doi":"10.1172/jci140869","title":"Tankyrase represses autoinflammation through the attenuation of TLR2 signaling","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; Hospital for Sick Children; SickKids Foundation; University Health Network; University of Toronto; Toronto Centre for Phenogenomics; Princess Margaret Cancer Centre","funders":"Japan Society for the Promotion of Science; Daiichi Sankyo Foundation of Life Science; Toray Science Foundation; Japan Intractable Diseases Research Foundation; Japan Foundation for Applied Enzymology","keywords":"Syk; TLR2; Phosphorylation; Inflammation; Signal transducing adaptor protein; Cell biology; Tyrosine phosphorylation; Signal transduction; Cancer research; Biology; Proto-oncogene tyrosine-protein kinase Src; TRIF; Cytokine; Innate immune system; Immunology; Tyrosine kinase; Toll-like receptor; TLR4; Immune system","score_opus":0.07134989035841112,"score_gpt":0.34908553086792554,"score_spread":0.27773564050951444,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220994403","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9922791,0.00083870743,0.0015341757,0.0037111668,0.001233452,0.00016775657,0.0000034901998,0.000011924066,0.00022024318],"genre_scores_gemma":[0.99871624,0.00008106685,0.00040444036,0.00031090569,0.00015624429,0.000008207666,0.00004234431,0.000008179007,0.0002723794],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.995903,0.0017703305,0.0019432985,0.00010780527,0.00016576824,0.00010975421],"domain_scores_gemma":[0.99551594,0.0013122992,0.002589342,0.00020928786,0.00035875334,0.00001435061],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0045498004,0.0000867898,0.000315326,0.00008658191,0.00028218477,0.0000131818515,0.00024767747,0.000110453664,0.00038186932],"category_scores_gemma":[0.0028895258,0.00006230555,0.00021765348,0.00022293028,0.00024098452,0.00040485788,0.00006487171,0.00059635966,0.000018909574],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012876547,0.00016219253,0.010203146,0.00003609859,0.00033130325,0.0000048069965,0.0034919907,0.009029676,0.94620675,0.0050092055,0.009581826,0.014655331],"study_design_scores_gemma":[0.003612896,0.0017120612,0.051381398,0.00017486773,0.00036679272,0.00024894485,0.0026840274,0.000716865,0.8362688,0.024468899,0.07811372,0.0002507641],"about_ca_topic_score_codex":0.000021410979,"about_ca_topic_score_gemma":0.0000010672875,"teacher_disagreement_score":0.109938,"about_ca_system_score_codex":0.000036027257,"about_ca_system_score_gemma":0.0002712415,"threshold_uncertainty_score":0.41812012},"labels":[],"label_agreement":null},{"id":"W4221001100","doi":"10.1172/jci151382","title":"NOGOB receptor deficiency increases cerebrovascular permeability and hemorrhage via impairing histone acetylation–mediated CCM1/2 expression","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Vascular Malformations Diagnosis and Treatment","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; National Institutes of Health; Medical College of Wisconsin; School of Medicine, New York University; York University; American Heart Association","keywords":"Histone; Epigenetics; Acetylation; Histone acetyltransferase; Histone H4; Receptor; Pathogenesis; Histone H2A","score_opus":0.04399866428239658,"score_gpt":0.34313851592727296,"score_spread":0.2991398516448764,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4221001100","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99577016,0.0012322244,0.000534876,0.0018322198,0.00024229426,0.00030886245,0.000008455631,0.00002410933,0.00004680573],"genre_scores_gemma":[0.99179673,0.00023031462,0.0071467203,0.00049985823,0.00019340767,0.00002258022,0.00007573996,0.000014446318,0.000020174182],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9970538,0.0005334545,0.0013919218,0.00020668193,0.0006692921,0.00014484582],"domain_scores_gemma":[0.9977616,0.0005183367,0.00083978893,0.0002501806,0.00029394956,0.0003361615],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0030006198,0.00013688135,0.00049383263,0.00015834504,0.00028581123,0.000022607117,0.00008505017,0.000086549786,0.0003901874],"category_scores_gemma":[0.002670614,0.00010906987,0.000338734,0.00028368167,0.00015355572,0.00033682142,0.00009163497,0.00048544895,0.000009558045],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030511583,0.0023585644,0.9648399,0.00021175414,0.00017017212,0.000035909696,0.00079265935,0.0006029086,0.0074977055,0.00005154174,0.0014561514,0.021677626],"study_design_scores_gemma":[0.0056197597,0.0018816076,0.9783229,0.00016387571,0.00049807184,0.0005305865,0.0004634656,0.006615159,0.0033672543,0.000505064,0.0018374769,0.00019474448],"about_ca_topic_score_codex":0.000036931822,"about_ca_topic_score_gemma":0.000002302219,"teacher_disagreement_score":0.021482881,"about_ca_system_score_codex":0.0002248168,"about_ca_system_score_gemma":0.00025063063,"threshold_uncertainty_score":0.44477403},"labels":[],"label_agreement":null},{"id":"W4221028282","doi":"10.1172/jci149571","title":"Gut-derived bacterial toxins impair memory CD4+ T cell mitochondrial function in HIV-1 infection","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"National Institute of Allergy and Infectious Diseases; Center for AIDS Research, University of Washington; National Institutes of Health; Case Western Reserve University; National Institute on Aging; Eli Lilly and Company; Emory University; National Heart, Lung, and Blood Institute; Gilead Sciences","keywords":"T cell; Immune system; Cell; Cytotoxic T cell; CD8; Gut flora; Mitochondrion","score_opus":0.03318300433840342,"score_gpt":0.31931287941895337,"score_spread":0.28612987508054993,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4221028282","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946752,0.00006725745,0.00048918434,0.0006303437,0.0038574024,0.0001634536,0.000010826274,0.0000056281638,0.00010069139],"genre_scores_gemma":[0.99527514,0.00010271486,0.00075397966,0.0008579512,0.0026759997,0.0000071544523,0.00013750658,0.000015742333,0.00017383457],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99770015,0.00060548057,0.0011413818,0.00020321443,0.00018422185,0.00016553966],"domain_scores_gemma":[0.99870867,0.00005072913,0.0008167417,0.00014862341,0.00012243097,0.00015280773],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001196379,0.000111488116,0.00026741592,0.000112180234,0.00011165406,0.000021543612,0.00011474815,0.00018531346,0.00014355962],"category_scores_gemma":[0.00035360528,0.00011039358,0.00020730944,0.00013628874,0.00006925762,0.000019713007,0.000079063095,0.00052085146,0.000007616069],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009513698,0.00018981093,0.017057208,0.000017160892,0.000019482231,0.000003855261,0.00007086462,0.00074166065,0.96871954,0.0000060898783,0.011441452,0.0007814961],"study_design_scores_gemma":[0.010284672,0.007630109,0.813124,0.00004919663,0.000114754665,0.00012209156,0.00022681369,0.00024106004,0.089732826,0.0007314825,0.077318154,0.00042481255],"about_ca_topic_score_codex":0.00002977851,"about_ca_topic_score_gemma":0.00006178092,"teacher_disagreement_score":0.8789867,"about_ca_system_score_codex":0.00006404342,"about_ca_system_score_gemma":0.0005272085,"threshold_uncertainty_score":0.45017195},"labels":[],"label_agreement":null},{"id":"W4221035323","doi":"10.1172/jci158471","title":"The FoxOs are in the ApoM house","year":2022,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"FOXO transcription factor regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Thrombosis and Atherosclerosis Research Institute","funders":"National Heart, Lung, and Blood Institute; National Institutes of Health; Vanderbilt University Medical Center; Vanderbilt University","keywords":"Insulin resistance; Endocrinology; Internal medicine; Metabolic syndrome; Apolipoprotein B; Biology; Lipid metabolism; Insulin; Diabetes mellitus; Medicine; Cholesterol","score_opus":0.08489197724774487,"score_gpt":0.347899911081844,"score_spread":0.2630079338340991,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4221035323","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.25510663,0.0007931046,0.0000987315,0.74169654,0.001919717,0.00027890125,0.000014385656,0.0000062752265,0.00008574551],"genre_scores_gemma":[0.24654098,0.0010938938,0.00023689792,0.73866427,0.01230693,0.000030435784,0.0002590094,0.00008294477,0.00078464474],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9964245,0.0013398965,0.0013114656,0.00018644858,0.0005806961,0.00015697765],"domain_scores_gemma":[0.99742144,0.0004281796,0.001564253,0.00037714976,0.00016645578,0.000042529584],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029371642,0.00014988716,0.00026896782,0.000059067544,0.00013498247,0.00007583699,0.0006044817,0.000507524,0.000018011673],"category_scores_gemma":[0.00135493,0.00008809729,0.0003648378,0.00012411752,0.0002490564,0.000009681299,0.000036295813,0.0021028067,0.000004669095],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007690878,0.000024521383,0.005332693,0.000014920224,0.00005796558,0.000030168358,0.000058128197,0.00012429724,0.0007589257,0.000019861141,0.99275494,0.00074669096],"study_design_scores_gemma":[0.00045944395,0.0003763302,0.029892793,0.00003258356,0.000047125694,0.00004101013,0.000073939256,0.000024411009,0.000226659,0.0010490532,0.96767217,0.0001044723],"about_ca_topic_score_codex":0.0000062643912,"about_ca_topic_score_gemma":0.00003364249,"teacher_disagreement_score":0.025082741,"about_ca_system_score_codex":0.000028032993,"about_ca_system_score_gemma":0.00022318898,"threshold_uncertainty_score":0.91357654},"labels":[],"label_agreement":null},{"id":"W4223914468","doi":"10.1172/jci160227","title":"Recalibrating vascular malformations and mechanotransduction by pharmacological intervention","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Vascular Malformations and Hemangiomas","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Fondation Leducq","keywords":"Mechanotransduction; Blood flow; Blood vessel; Hemodynamics; Endothelium; Arteriogenesis; Lymphatic system; Endothelial stem cell","score_opus":0.0721099845487768,"score_gpt":0.3786889344411071,"score_spread":0.30657894989233025,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4223914468","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9826241,0.00052539766,0.012150007,0.003996085,0.00038366902,0.00018835528,0.0000047803965,0.000018296536,0.00010931052],"genre_scores_gemma":[0.99194026,0.00020090512,0.006598394,0.0008710513,0.00023606796,0.000012763069,0.000053824933,0.000008461954,0.00007827972],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99791384,0.0003182928,0.0012137175,0.000092646515,0.0003732209,0.00008828732],"domain_scores_gemma":[0.99889046,0.00009203266,0.0006353909,0.00007051628,0.00015103485,0.00016058507],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002691418,0.0000715216,0.0002757494,0.00012648692,0.00020373313,0.000024181521,0.000055330693,0.000063787236,0.00031201175],"category_scores_gemma":[0.00032594756,0.000060485556,0.00030352428,0.0002025147,0.00006699529,0.0004481296,0.00003650281,0.0004930746,0.000002356935],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025751384,0.0063558277,0.1268059,0.0012431364,0.004744554,0.00016114823,0.0063638585,0.0041104974,0.2009844,0.02301223,0.1571681,0.4664752],"study_design_scores_gemma":[0.05468043,0.023507362,0.27461246,0.0011018896,0.008247362,0.008222536,0.010508379,0.21797307,0.04191112,0.045540325,0.31209975,0.0015953323],"about_ca_topic_score_codex":0.0000032888913,"about_ca_topic_score_gemma":3.1045155e-7,"teacher_disagreement_score":0.46487987,"about_ca_system_score_codex":0.00004106862,"about_ca_system_score_gemma":0.00006458069,"threshold_uncertainty_score":0.341631},"labels":[],"label_agreement":null},{"id":"W4223954793","doi":"10.1172/jci151817","title":"Long-term male-specific chronic pain via telomere- and p53‑mediated spinal cord cellular senescence","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pain Mechanisms and Treatments","field":"Medicine","cited_by":61,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Medical Research Council; Canadian Institutes of Health Research; Louise and Alan Edwards Foundation; Cancer Council NSW; Fondation Brain Canada; McGill University","keywords":"Spinal cord; Chronic pain; Medicine; Microglia; Senescence; Neuropathic pain; Telomere; Nerve injury; Spinal cord injury; Nociception; Neuroscience; Bioinformatics; Biology; Internal medicine; Anesthesia; Inflammation; Genetics; Receptor; Gene","score_opus":0.08039352377105839,"score_gpt":0.3572583771842888,"score_spread":0.2768648534132304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4223954793","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9887937,0.0019729906,0.006537039,0.0018437203,0.00057663367,0.00023234877,0.0000035283558,0.00001434096,0.000025720283],"genre_scores_gemma":[0.99531645,0.0006228238,0.0022208337,0.0009904606,0.0006432848,0.0000070395113,0.000029482591,0.000018738701,0.00015091836],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99726385,0.0006217624,0.001139441,0.00022254522,0.00055906666,0.00019331789],"domain_scores_gemma":[0.9980592,0.0003634581,0.00084065634,0.00017598348,0.0001488299,0.00041186382],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0034837876,0.00014669968,0.00047453592,0.0001290838,0.00014613793,0.000021476219,0.000105484345,0.0000979169,0.00032690962],"category_scores_gemma":[0.0005394485,0.00012244505,0.00016968363,0.00021735071,0.0001685167,0.00012251273,0.00005613657,0.00065750006,0.000014439602],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019752518,0.00060036324,0.7994624,0.00015597012,0.0002308373,0.0020536366,0.00006839431,0.000013772716,0.06650933,0.00021577506,0.0009031509,0.12781112],"study_design_scores_gemma":[0.006996921,0.017516464,0.960854,0.0005070716,0.00033299034,0.001523396,0.00007550781,0.0025456315,0.0040423046,0.0019118657,0.0034211138,0.00027274567],"about_ca_topic_score_codex":0.0000043470295,"about_ca_topic_score_gemma":0.0000016377583,"teacher_disagreement_score":0.16139159,"about_ca_system_score_codex":0.00015901768,"about_ca_system_score_gemma":0.0003020015,"threshold_uncertainty_score":0.49931645},"labels":[],"label_agreement":null},{"id":"W4225255751","doi":"10.1172/jci157011","title":"Through the layers: how macrophages drive atherosclerosis across the vessel wall","year":2022,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Immune cells in cancer","field":"Immunology and Microbiology","cited_by":93,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity; University of Ottawa","funders":"Canadian Institutes of Health Research; European Research Area Network on Cardiovascular Diseases","keywords":"Arterial wall; Extracellular matrix; Disease; Macrophage; Coronary artery disease; Inflammation; Cholesterol; Medicine; Smooth muscle; Monocyte; Endothelium; Function (biology); Immunology; Pathology; Biology; Cardiology; Cell biology; Internal medicine; Genetics","score_opus":0.1920626887045189,"score_gpt":0.4241103451371271,"score_spread":0.2320476564326082,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4225255751","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0006704103,0.9856143,0.000031543612,0.005329013,0.007630535,0.0005239586,0.000046361343,0.000018567654,0.00013532228],"genre_scores_gemma":[0.000502793,0.99384725,0.00008884358,0.0020076402,0.00070841186,0.00005847662,0.000055339773,0.00006474362,0.0026665148],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9923048,0.0042581633,0.0024548573,0.00034894387,0.00021807246,0.0004151758],"domain_scores_gemma":[0.98726773,0.006543936,0.005218702,0.0007280564,0.00020805567,0.0000335254],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.005031362,0.0004246219,0.0019398372,0.000042210486,0.0007276847,0.00013232297,0.0018350413,0.0008076396,0.00060707],"category_scores_gemma":[0.0023720916,0.00020640926,0.0016569106,0.000369413,0.0018419431,0.0002519691,0.00038888396,0.0045276913,0.00015056864],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000889909,0.00020949524,0.000111402536,0.0014138897,0.003448771,0.000015952044,0.0039018155,0.000022700327,0.00016304957,0.00056902017,0.2115826,0.7784723],"study_design_scores_gemma":[0.0005793555,0.00029495623,0.00010599492,0.0017281702,0.0010530426,0.0001707795,0.0004853375,5.507398e-7,0.00010642158,0.0007846681,0.99447364,0.00021711213],"about_ca_topic_score_codex":0.000024960771,"about_ca_topic_score_gemma":0.0000046030614,"teacher_disagreement_score":0.78289104,"about_ca_system_score_codex":0.00016610367,"about_ca_system_score_gemma":0.0007315884,"threshold_uncertainty_score":0.9977689},"labels":[],"label_agreement":null},{"id":"W4225939416","doi":"10.1172/jci154891","title":"Ataxia-linked SLC1A3 mutations alter EAAT1 chloride channel activity and glial regulation of CNS function","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Neuroscience and Neuropharmacology Research","field":"Neuroscience","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"National Health and Medical Research Council; National Institute of General Medical Sciences; Medical Research Council; Canadian Institutes of Health Research; Loxo Oncology; National Institutes of Health; Weill Cornell Medical College; McGill University; University of Sydney; National Centre for Supercomputing Applications; Eli Lilly and Company","keywords":"Glutamate receptor; Chloride channel; Ataxia; Neurotoxicity; Excitatory postsynaptic potential; Biology; Cell biology; Mutation; Neuroscience; Chemistry; Biochemistry; Inhibitory postsynaptic potential; Receptor","score_opus":0.20338422515562962,"score_gpt":0.4276291718869455,"score_spread":0.22424494673131587,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4225939416","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947651,0.000009080636,0.00050167384,0.0027241367,0.0017229238,0.00020713538,0.000012684905,0.000012801904,0.00004447757],"genre_scores_gemma":[0.9980974,0.00006538172,0.00004281062,0.0011726696,0.00037785544,0.000009948178,0.0000011508506,0.000011207388,0.00022154412],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9966663,0.0011563958,0.00092535914,0.00030012144,0.00076943106,0.00018236051],"domain_scores_gemma":[0.9969577,0.0014081156,0.0011171179,0.00014072882,0.00017537111,0.00020093852],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021596726,0.00010018496,0.00029390468,0.00025638513,0.00037258794,0.000032127533,0.00023234746,0.000063185136,0.00007475345],"category_scores_gemma":[0.0035026923,0.00009219652,0.00012803757,0.00057699136,0.00059881853,0.00070136815,0.00013977065,0.00083192386,0.0000039507536],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008573391,0.00016423523,0.0028252068,0.000012280063,0.0000062650724,0.000015618098,0.00010153245,0.0014570889,0.99263316,0.00020039227,0.0003535179,0.0013733663],"study_design_scores_gemma":[0.0017359905,0.0022926524,0.15911931,0.000015063065,0.000063680025,0.00013319601,0.000042088297,0.016877513,0.8106345,0.008377428,0.0005881504,0.00012046072],"about_ca_topic_score_codex":0.000006304142,"about_ca_topic_score_gemma":0.0000013593838,"teacher_disagreement_score":0.18199869,"about_ca_system_score_codex":0.00003237684,"about_ca_system_score_gemma":0.00026636376,"threshold_uncertainty_score":0.41933027},"labels":[],"label_agreement":null},{"id":"W4226281599","doi":"10.1172/jci145343","title":"Tumor-associated antigen PRAME exhibits dualistic functions that are targetable in diffuse large B cell lymphoma","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immunotherapy and Immune Responses","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Terry Fox Research Institute; University of British Columbia; Spinal Cord Injury BC","funders":"Weill Cornell Medical College; National Cancer Institute; BC Cancer Foundation; Terry Fox Research Institute; Genome British Columbia; Michael Smith Health Research BC; Leukemia and Lymphoma Society of Canada; Canadian Institutes of Health Research; Genome Canada; Uehara Memorial Foundation; Leukemia and Lymphoma Society","keywords":"Diffuse large B-cell lymphoma; EZH2; Lymphoma; Tumor microenvironment; Epigenetics; Immune system; Somatic cell; Antigen; Reprogramming","score_opus":0.048893662792145666,"score_gpt":0.30494434180959645,"score_spread":0.25605067901745077,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4226281599","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99202496,0.004441938,0.000073688,0.0007801947,0.0023245828,0.0001654138,0.000059750273,0.000024475159,0.00010498089],"genre_scores_gemma":[0.99509645,0.00024339021,0.00004622581,0.001195794,0.00006292462,0.000012601403,0.00009083071,0.000023078654,0.0032286998],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9958431,0.0019447398,0.0015023529,0.00020515018,0.00014857121,0.00035605647],"domain_scores_gemma":[0.9964865,0.0011636995,0.0019227033,0.00021211781,0.00016467013,0.000050309838],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0035597081,0.00017184597,0.00063262164,0.00026223226,0.00039813024,0.000026790167,0.00029145984,0.00019856915,0.00058645156],"category_scores_gemma":[0.0020817528,0.00015652145,0.00028815737,0.00038316232,0.0001867657,0.00027523673,0.00010357388,0.0009011247,0.000070696384],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005028582,0.024228713,0.7852169,0.000052687625,0.0008275991,0.0002653687,0.0020823544,0.0003220707,0.13469192,0.00045929107,0.044604138,0.002220345],"study_design_scores_gemma":[0.033857346,0.002039106,0.82826364,0.00017921874,0.00013558262,0.00026177126,0.0022140576,0.00009975304,0.022038775,0.0017505185,0.108728975,0.00043123518],"about_ca_topic_score_codex":0.000046559762,"about_ca_topic_score_gemma":0.000022485312,"teacher_disagreement_score":0.11265315,"about_ca_system_score_codex":0.00013860653,"about_ca_system_score_gemma":0.00044667322,"threshold_uncertainty_score":0.64212334},"labels":[],"label_agreement":null},{"id":"W4229012234","doi":"10.1172/jci152565","title":"Peripheral monocyte–derived cells counter amyloid plaque pathogenesis in a mouse model of Alzheimer’s disease","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Neuroinflammation and Neurodegeneration Mechanisms","field":"Neuroscience","cited_by":87,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"National Institute of Allergy and Infectious Diseases; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; Hope Center for Neurological Disorders; National Institutes of Health; National Institute of Neurological Disorders and Stroke; Alzheimer's Association","keywords":"Choroid plexus; Microglia; Parenchyma; Pathology; Monocyte; Haematopoiesis; Pathogenesis; Senile plaques; Biology; Macrophage; Amyloid (mycology); Immunology; Alzheimer's disease; Medicine; Disease; Central nervous system; Inflammation; Cell biology; Neuroscience; Stem cell","score_opus":0.15232280349401342,"score_gpt":0.3436018812800069,"score_spread":0.19127907778599348,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4229012234","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962571,0.000020646325,0.0015664255,0.0012859168,0.00054851256,0.00022239819,0.000060705042,0.000016571723,0.000021703232],"genre_scores_gemma":[0.99455655,0.00012817355,0.0013522198,0.00365312,0.00010629495,0.000015375581,0.0000033213494,0.000023825312,0.0001611118],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9959339,0.0010655101,0.0018628193,0.00027624788,0.00070752786,0.00015398198],"domain_scores_gemma":[0.997719,0.00029398588,0.0013688853,0.00021740171,0.00012289245,0.00027783957],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011922912,0.00014081162,0.0003828514,0.00020916248,0.000112450165,0.00003441791,0.00029012698,0.000051395753,0.00010682397],"category_scores_gemma":[0.0008482549,0.00013636798,0.00023201284,0.00023661785,0.00012442247,0.00038502892,0.00008756341,0.00046867816,0.000003952907],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030357434,0.00015093572,0.0004164746,0.0000073149436,0.0000037291613,0.000025442103,0.00016766414,0.15711182,0.84071976,0.00071823294,0.00017845494,0.00019659063],"study_design_scores_gemma":[0.0010193188,0.00022562702,0.0006336549,0.0000096665035,0.000025246181,0.0000073365823,0.000029750763,0.22466291,0.7716674,0.0015326756,0.00008120816,0.00010516778],"about_ca_topic_score_codex":0.0000020747887,"about_ca_topic_score_gemma":0.0000023690911,"teacher_disagreement_score":0.06905233,"about_ca_system_score_codex":0.000042167478,"about_ca_system_score_gemma":0.0004208629,"threshold_uncertainty_score":0.5560925},"labels":[],"label_agreement":null},{"id":"W4229563830","doi":"10.1172/jci0215952","title":"The effects of intravenous pamidronate on the bone tissue of children and adolescents with osteogenesis imperfecta","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Connective tissue disorders research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":252,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Shriners Hospitals for Children - Canada; Montreal Children's Hospital","funders":"","keywords":"Osteogenesis imperfecta; Cancellous bone; Resorption; Cortical bone; Bone remodeling; Bone resorption; Medicine; Biopsy; Endocrinology; Bone histomorphometry; Bone biopsy; Internal medicine; Osteoporosis; Anatomy; Trabecular bone","score_opus":0.020012068377054014,"score_gpt":0.3061488085369086,"score_spread":0.28613674015985463,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4229563830","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966987,0.0021248513,0.000029509925,0.00085736735,0.00004920251,0.00021592318,0.000002067633,7.1946874e-7,0.00002169492],"genre_scores_gemma":[0.99809,0.0016505521,0.00003417177,0.000085692904,0.00009572197,0.0000021125782,0.0000015808583,0.0000088668185,0.000031270476],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988093,0.00029993773,0.00045617548,0.00010564646,0.00023237735,0.000096582815],"domain_scores_gemma":[0.9987453,0.0003219035,0.00047083673,0.00017521702,0.00021785007,0.000068862006],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007933423,0.00007531779,0.000192842,0.000026761016,0.00005456539,0.000009742212,0.00015098542,0.00007840341,0.0000036857632],"category_scores_gemma":[0.001980624,0.00003944587,0.00006126856,0.000078526406,0.0004172576,0.000004232211,0.00003988831,0.000177713,7.5773255e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010651177,0.00040088134,0.22857767,0.00014860011,0.00037681634,0.000007884742,0.00028053136,0.000033962133,0.62166137,0.00014025171,0.00091126974,0.14639567],"study_design_scores_gemma":[0.001409906,0.0056207743,0.53244686,0.0002664111,0.000057617308,0.000033329703,0.00003650622,0.000049773967,0.45963073,0.00023651899,0.00013713924,0.00007440129],"about_ca_topic_score_codex":0.000011687027,"about_ca_topic_score_gemma":0.000015694111,"teacher_disagreement_score":0.30386922,"about_ca_system_score_codex":0.0000042870665,"about_ca_system_score_gemma":0.000040241037,"threshold_uncertainty_score":0.23711349},"labels":[],"label_agreement":null},{"id":"W4229840448","doi":"10.1172/jci200216551","title":"Hot new therapy for sepsis and the acute respiratory distress syndrome","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Respiratory Support and Mechanisms","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"","keywords":"Sepsis; Acute respiratory distress; Medicine; Intensive care medicine; Respiratory distress; Internal medicine; Lung; Surgery","score_opus":0.1638049174077532,"score_gpt":0.3966959609612309,"score_spread":0.2328910435534777,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4229840448","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9856759,0.0013006725,0.0009881983,0.011012325,0.00049502385,0.00039168814,0.000004096856,0.000009857146,0.00012226537],"genre_scores_gemma":[0.97181714,0.001215815,0.0042199786,0.019380085,0.0014782263,0.00001123597,0.0000042249585,0.000028374276,0.0018449106],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99829406,0.00014119984,0.001044394,0.0001236809,0.00027775613,0.000118921256],"domain_scores_gemma":[0.9980272,0.0005589483,0.00069727004,0.00017082415,0.00018142973,0.00036432222],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017188586,0.00010283256,0.00049863505,0.000058693804,0.00006822759,0.000032427906,0.000096338255,0.00013622193,0.00009150756],"category_scores_gemma":[0.0008997938,0.000056562112,0.00028675076,0.000091889226,0.00025412627,0.000164412,0.000011816602,0.00031001744,0.0000055241157],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.012612418,0.00073551084,0.14719251,0.00020498103,0.0027178328,0.0005582001,0.002101105,0.0000114905615,0.013726168,0.0074333423,0.292327,0.5203795],"study_design_scores_gemma":[0.0858298,0.017552538,0.28673908,0.0008185842,0.0021978386,0.001469827,0.00033471716,0.0021341657,0.0119738,0.04890948,0.5414522,0.00058790547],"about_ca_topic_score_codex":0.0000016746685,"about_ca_topic_score_gemma":7.787206e-7,"teacher_disagreement_score":0.51979154,"about_ca_system_score_codex":0.00001141411,"about_ca_system_score_gemma":0.00012083454,"threshold_uncertainty_score":0.2306536},"labels":[],"label_agreement":null},{"id":"W4230835938","doi":"10.1172/jci200317974","title":"Anti-IL-5 treatment reduces deposition of ECM proteins in the bronchial subepithelial basement membrane of mild atopic asthmatics","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Asthma and respiratory diseases","field":"Medicine","cited_by":84,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Christie (Canada)","funders":"Wellcome Trust; GlaxoSmithKline","keywords":"Basement membrane; Asthma; Medicine; Membrane; Pathology; Chemistry; Immunology; Biochemistry","score_opus":0.06907356681266541,"score_gpt":0.36392874154126686,"score_spread":0.29485517472860145,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4230835938","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980025,0.00022995524,0.00012036685,0.00093479565,0.0001830241,0.00040411172,0.0000066019356,0.0000024160393,0.00011621166],"genre_scores_gemma":[0.9964948,0.00014632197,0.0027760954,0.00024688017,0.0003046663,0.0000052083437,0.000005504302,0.000006895775,0.000013581361],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9971773,0.00056681276,0.0016102546,0.00009279022,0.0004553596,0.000097456665],"domain_scores_gemma":[0.99817634,0.000276222,0.0010826961,0.00015008629,0.00018883577,0.00012581838],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012541666,0.00010229346,0.0005160109,0.000099166646,0.000028900618,0.00000682347,0.000075294985,0.000099860576,0.000022725884],"category_scores_gemma":[0.0008967794,0.000058591828,0.00025831375,0.00015572019,0.00021087249,0.00008934952,0.000005251572,0.00018170859,0.0000010523331],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015896378,0.008165525,0.79205585,0.00091794186,0.0004916993,0.0001554521,0.0029859194,0.00083233183,0.14642389,0.0018917053,0.00045799895,0.04403204],"study_design_scores_gemma":[0.0057967645,0.0056558186,0.57456535,0.0009486735,0.00041711942,0.00005622368,0.00065903884,0.0002540095,0.4099511,0.0008457668,0.00074830244,0.0001018462],"about_ca_topic_score_codex":0.000018459603,"about_ca_topic_score_gemma":0.000010483224,"teacher_disagreement_score":0.26352718,"about_ca_system_score_codex":0.000038017457,"about_ca_system_score_gemma":0.0005041744,"threshold_uncertainty_score":0.23893054},"labels":[],"label_agreement":null},{"id":"W4231058232","doi":"10.1172/jci200213265","title":"Cardiomyocyte overexpression of iNOS in mice results in peroxynitrite generation, heart block, and sudden death","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Nitric Oxide and Endothelin Effects","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; St. Michael's Hospital; Toronto General Hospital; Heart and Stroke Foundation; University of Toronto","funders":"Medical Research Council; Canadian Institutes of Health Research; Alberta Heritage Foundation for Medical Research; Fondation pour la Recherche Médicale; Medical Research Council Canada; Heart and Stroke Foundation of Canada","keywords":"Peroxynitrite; Block (permutation group theory); Chemistry; Heart block; Cardiology; Internal medicine; Medicine; Cell biology; Biology; Biochemistry; Electrocardiography; Superoxide; Enzyme","score_opus":0.11609978838374604,"score_gpt":0.36468479715062524,"score_spread":0.2485850087668792,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4231058232","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99673724,0.00071745674,0.000006661943,0.0020103082,0.00013026361,0.00016679606,0.0000026290709,0.0000036339513,0.00022498805],"genre_scores_gemma":[0.9955592,0.0006332687,0.002600653,0.00055167684,0.0005630711,0.0000014330345,0.0000028392647,0.000008610445,0.00007920982],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9973814,0.00036515074,0.0016778775,0.00014642031,0.00031363443,0.00011552787],"domain_scores_gemma":[0.9982048,0.0007474378,0.0005554849,0.00011945342,0.0001996345,0.00017315045],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002342341,0.00009258994,0.00056452805,0.0002667164,0.000016081347,0.000009646059,0.000047839832,0.00016846218,0.000007660907],"category_scores_gemma":[0.004527335,0.00007385985,0.00010929862,0.00024197425,0.000078181074,0.00018679733,0.000018917513,0.00046071436,0.0000028275467],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009338144,0.00032936718,0.8159441,0.00012830949,0.000045096967,0.00009096763,0.0006916255,0.00043874382,0.17238024,0.000028697197,0.0053211325,0.0036679064],"study_design_scores_gemma":[0.013310222,0.0012280706,0.934695,0.001739852,0.00009484791,0.0002660822,0.00007479159,0.0114895515,0.035444655,0.00041969417,0.0010973463,0.0001399006],"about_ca_topic_score_codex":0.00008022321,"about_ca_topic_score_gemma":0.00001477405,"teacher_disagreement_score":0.13693558,"about_ca_system_score_codex":0.00003162004,"about_ca_system_score_gemma":0.00008456834,"threshold_uncertainty_score":0.541997},"labels":[],"label_agreement":null},{"id":"W4231840887","doi":"10.1172/jci200213946","title":"Insulin signaling coordinately regulates cardiac size, metabolism, and contractile protein isoform expression","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cardiovascular Function and Risk Factors","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institutes of Health; American Diabetes Association","keywords":"GLUT4; Internal medicine; Endocrinology; Insulin receptor; Insulin; Biology; Glucose uptake; GLUT1; Glucose transporter; Carbohydrate metabolism; Glycolysis; Metabolism; Insulin resistance; Medicine","score_opus":0.053149278519857374,"score_gpt":0.31416502144666303,"score_spread":0.2610157429268056,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4231840887","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944277,0.002723147,0.00019200101,0.0013886614,0.0007275688,0.00029002546,0.0000025459403,0.00002446481,0.00022390655],"genre_scores_gemma":[0.99471647,0.0010464491,0.0022640862,0.00035960783,0.0010897566,0.0000036807023,0.0000025844695,0.00001872719,0.0004986441],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99769974,0.00024656413,0.0012514157,0.00017417877,0.00048304192,0.00014507592],"domain_scores_gemma":[0.9975828,0.00063117425,0.0007801433,0.0001666703,0.00042783856,0.0004114049],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019456226,0.00014124435,0.00080904405,0.000101625,0.00008257245,0.000041384705,0.000050227398,0.00023656536,0.00016902687],"category_scores_gemma":[0.0053602965,0.00009812821,0.0005351219,0.00016525052,0.00017779149,0.00034495167,0.000020552934,0.0006270804,0.000011911395],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027195057,0.0009011465,0.25456703,0.00038805426,0.002299891,0.00019890866,0.0013745105,0.0002842185,0.56103647,0.00034538878,0.023005454,0.15287942],"study_design_scores_gemma":[0.006952122,0.0009182307,0.72515535,0.0011872036,0.0011371217,0.00026011682,0.0004020814,0.0012287594,0.19659838,0.0011441229,0.064674124,0.00034236733],"about_ca_topic_score_codex":0.000010020051,"about_ca_topic_score_gemma":3.9585427e-7,"teacher_disagreement_score":0.47058836,"about_ca_system_score_codex":0.000024926796,"about_ca_system_score_gemma":0.00007548285,"threshold_uncertainty_score":0.6417163},"labels":[],"label_agreement":null},{"id":"W4231969407","doi":"10.1172/jci0215883","title":"EphB6 crosslinking results in costimulation of T cells","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Axon Guidance and Neuronal Signaling","field":"Neuroscience","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Notre-Dame; Centre Hospitalier de l’Université de Montréal","funders":"Canadian Institutes of Health Research; Heart And Stroke Foundation Of Quebec; Roche Organ Transplant Research Foundation; Kidney Foundation of Canada; Heart and Stroke Foundation of Canada","keywords":"CD28; Biology; T cell; T-cell receptor; Cell biology; Molecular biology; Immunology; Immune system","score_opus":0.27908655831452694,"score_gpt":0.4060633871174051,"score_spread":0.12697682880287814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4231969407","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977353,0.000041148185,0.00029579914,0.0008439417,0.00047825326,0.00007805113,0.0000027311778,0.0000060647462,0.0005187099],"genre_scores_gemma":[0.99773395,0.00014934083,0.00087529526,0.0009104698,0.00027569628,3.8541748e-7,3.54618e-7,0.0000065296804,0.000047954225],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9966168,0.0003720273,0.0022731065,0.00016791931,0.0004431261,0.00012705967],"domain_scores_gemma":[0.9955531,0.002328279,0.0017636492,0.00011127575,0.0001355077,0.00010822762],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019041692,0.00007952439,0.00031247502,0.00013499125,0.000039603892,0.00002160311,0.00018100369,0.00010697739,0.000027781673],"category_scores_gemma":[0.008039328,0.00006909807,0.00013281392,0.00033936862,0.0001836912,0.00040490337,0.000021398919,0.0004390861,0.00001548444],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047256678,0.00028400787,0.029091444,0.000031018535,0.000005611021,0.00007167584,0.0006240303,0.02549227,0.923839,0.00055546407,0.0010159287,0.018516986],"study_design_scores_gemma":[0.003277929,0.00074404036,0.04800917,0.0004592251,0.00001964962,0.000021598687,0.000019578169,0.054219224,0.8850076,0.006685287,0.001385204,0.00015146604],"about_ca_topic_score_codex":0.0000041885523,"about_ca_topic_score_gemma":0.0000020657008,"teacher_disagreement_score":0.038831364,"about_ca_system_score_codex":0.000020168087,"about_ca_system_score_gemma":0.000045955425,"threshold_uncertainty_score":0.9624407},"labels":[],"label_agreement":null},{"id":"W4232216688","doi":"10.1172/jci200522365","title":"The MODY1 gene HNF-4α regulates selected genes involved in insulin secretion","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":191,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Nutrition, Metabolism and Diabetes","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; University of Pennsylvania","keywords":"Endocrinology; Internal medicine; Biology; Glucose homeostasis; Hyperinsulinemia; Insulin; Hepatocyte nuclear factors; Potassium channel; Beta cell; Conditional gene knockout; Maturity onset diabetes of the young; Phenotype; Gene; Cell biology; Islet; Gene expression; Diabetes mellitus; Type 2 diabetes; Genetics; Insulin resistance; Medicine","score_opus":0.06396157975609104,"score_gpt":0.3416323734573163,"score_spread":0.27767079370122527,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4232216688","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9876097,0.0016649548,0.00011992431,0.009898889,0.00034461453,0.00015032102,6.7716445e-7,0.000019339714,0.0001916115],"genre_scores_gemma":[0.9902135,0.0012682456,0.005258478,0.0015599069,0.0013974124,0.0000038269773,0.00001536953,0.000012459299,0.0002707594],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974328,0.00030609712,0.0016073285,0.00012894609,0.0003631066,0.00016169656],"domain_scores_gemma":[0.99735236,0.00092271314,0.0007524985,0.00016375809,0.0005658772,0.00024279492],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023643917,0.000108711276,0.00041283804,0.00012780579,0.00007098161,0.000031803476,0.00008729646,0.00018372203,0.00003669539],"category_scores_gemma":[0.005969409,0.000069321046,0.00014348025,0.00040901816,0.0001874734,0.00020712196,0.000014090271,0.0004643757,0.000022481434],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015683466,0.0004052617,0.78640443,0.000048595062,0.00022942893,0.000017964627,0.0003237994,0.0011776373,0.12207343,0.0005248187,0.007146603,0.08007968],"study_design_scores_gemma":[0.0045386944,0.00073267135,0.8932595,0.0002554182,0.00014257629,0.000035918503,0.00010450736,0.028647358,0.05866849,0.004077822,0.009413256,0.00012378892],"about_ca_topic_score_codex":0.000009293424,"about_ca_topic_score_gemma":0.000023166087,"teacher_disagreement_score":0.106855065,"about_ca_system_score_codex":0.00007658987,"about_ca_system_score_gemma":0.0003961132,"threshold_uncertainty_score":0.71463716},"labels":[],"label_agreement":null},{"id":"W4233129017","doi":"10.1172/jci200318359","title":"Coordinated tumor immunity","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immunotherapy and Immune Responses","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto","funders":"Leukemia and Lymphoma Society; National Institutes of Health; Cancer Research Institute","keywords":"Immunity; Medicine; Immunology; Biology; Immune system","score_opus":0.06251970864299455,"score_gpt":0.3512548705233633,"score_spread":0.28873516188036874,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4233129017","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99338406,0.0028334141,0.00027459578,0.00032866027,0.0021952982,0.000074720745,0.0000014540129,0.000015789681,0.0008920034],"genre_scores_gemma":[0.9970224,0.00018742251,0.0004765528,0.0007890497,0.000048299233,0.0000011718136,0.0000053319172,0.000011253688,0.0014585542],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9967415,0.0015077961,0.0014365774,0.00009311342,0.000048919726,0.0001720979],"domain_scores_gemma":[0.99732697,0.0010510047,0.0010581028,0.00019406146,0.00033102342,0.00003884569],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0037637511,0.000113950344,0.0004434111,0.000110398076,0.00012918536,0.000014922285,0.00020156831,0.00020146173,0.00055912853],"category_scores_gemma":[0.0057880296,0.00008780912,0.00025970532,0.00017771045,0.00040418093,0.00021358921,0.000013907027,0.00078733213,0.00016662892],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002531552,0.0007114863,0.058406617,0.000024188408,0.00093189045,0.000034941597,0.00053026417,0.000022048413,0.8916394,0.012264975,0.017710201,0.015192413],"study_design_scores_gemma":[0.0073000877,0.0021616411,0.12139775,0.00018557024,0.00013917686,0.0009669682,0.00039502527,0.000004918361,0.5889587,0.011548244,0.2666316,0.000310314],"about_ca_topic_score_codex":0.000010435282,"about_ca_topic_score_gemma":5.530913e-7,"teacher_disagreement_score":0.30268073,"about_ca_system_score_codex":0.000020207328,"about_ca_system_score_gemma":0.00034212036,"threshold_uncertainty_score":0.692923},"labels":[],"label_agreement":null},{"id":"W4233455462","doi":"10.1172/jci0215748","title":"Increased ABCA1 activity protects against atherosclerosis","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cholesterol and Lipid Metabolism","field":"Medicine","cited_by":221,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; Xenon Pharmaceuticals (Canada); Children's & Women's Health Centre of British Columbia; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"ABCA1; Efflux; Cholesterol; Reverse cholesterol transport; Apolipoprotein E; Genetically modified mouse; Phospholipid; Transgene; Chemistry; Transporter; In vivo; Biology; Endocrinology; Lipoprotein; Internal medicine; Biochemistry; Medicine; Gene; Membrane; Genetics","score_opus":0.14440987041581818,"score_gpt":0.35980648760842343,"score_spread":0.21539661719260525,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4233455462","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99426025,0.00010911121,0.0001515945,0.0039999224,0.0005692419,0.00021851962,0.0000015028254,0.000021824633,0.00066800794],"genre_scores_gemma":[0.9918452,0.0002926098,0.0023063004,0.003139143,0.002130045,0.0000035471376,0.0000013213757,0.000017024384,0.0002648115],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99791366,0.0002841503,0.0010529759,0.00014871512,0.00045110765,0.00014938028],"domain_scores_gemma":[0.99780625,0.00026738876,0.00094783684,0.00020615877,0.0002797978,0.0004925731],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015777427,0.00012397749,0.0005878485,0.00010169895,0.000049205606,0.0000273363,0.00009246725,0.00019295864,0.00008776488],"category_scores_gemma":[0.0030520798,0.00009128647,0.00033035988,0.0001952744,0.00016566293,0.00028214243,0.000018934352,0.00072994345,0.000047696496],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008676322,0.0020587104,0.2684181,0.00020566591,0.0003572977,0.00005560855,0.0007019369,0.000032079355,0.3470549,0.000100814475,0.012207147,0.3679401],"study_design_scores_gemma":[0.0043994677,0.0006648696,0.96732897,0.00037835524,0.00013586247,0.00004680568,0.000013829622,0.0015776491,0.014373756,0.00026515135,0.010704785,0.00011051422],"about_ca_topic_score_codex":0.00000862315,"about_ca_topic_score_gemma":0.0000016303854,"teacher_disagreement_score":0.69891083,"about_ca_system_score_codex":0.00003078116,"about_ca_system_score_gemma":0.00009744422,"threshold_uncertainty_score":0.37225544},"labels":[],"label_agreement":null},{"id":"W4234935234","doi":"10.1172/jci0216551","title":"Hot new therapy for sepsis and the acute respiratory distress syndrome","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Respiratory Support and Mechanisms","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"","keywords":"Sepsis; Acute respiratory distress; Intensive care medicine; Medicine; Respiratory distress; Respiratory system; Bioinformatics; Immunology; Internal medicine; Lung; Biology; Surgery","score_opus":0.1638049174077532,"score_gpt":0.3966959609612309,"score_spread":0.2328910435534777,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4234935234","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9856759,0.0013006725,0.0009881983,0.011012325,0.00049502385,0.00039168814,0.000004096856,0.000009857146,0.00012226537],"genre_scores_gemma":[0.97181714,0.001215815,0.0042199786,0.019380085,0.0014782263,0.00001123597,0.0000042249585,0.000028374276,0.0018449106],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99829406,0.00014119984,0.001044394,0.0001236809,0.00027775613,0.000118921256],"domain_scores_gemma":[0.9980272,0.0005589483,0.00069727004,0.00017082415,0.00018142973,0.00036432222],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017188586,0.00010283256,0.00049863505,0.000058693804,0.00006822759,0.000032427906,0.000096338255,0.00013622193,0.00009150756],"category_scores_gemma":[0.0008997938,0.000056562112,0.00028675076,0.000091889226,0.00025412627,0.000164412,0.000011816602,0.00031001744,0.0000055241157],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.012612418,0.00073551084,0.14719251,0.00020498103,0.0027178328,0.0005582001,0.002101105,0.0000114905615,0.013726168,0.0074333423,0.292327,0.5203795],"study_design_scores_gemma":[0.0858298,0.017552538,0.28673908,0.0008185842,0.0021978386,0.001469827,0.00033471716,0.0021341657,0.0119738,0.04890948,0.5414522,0.00058790547],"about_ca_topic_score_codex":0.0000016746685,"about_ca_topic_score_gemma":7.787206e-7,"teacher_disagreement_score":0.51979154,"about_ca_system_score_codex":0.00001141411,"about_ca_system_score_gemma":0.00012083454,"threshold_uncertainty_score":0.2306536},"labels":[],"label_agreement":null},{"id":"W4235081779","doi":"10.1172/jci200112346","title":"Tumor-specific immunity and antiangiogenesis generated by a DNA vaccine encoding calreticulin linked to a tumor antigen","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immunotherapy and Immune Responses","field":"Immunology and Microbiology","cited_by":250,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Cancer Institute; National Health Research Institutes; National Institutes of Health; University of Alberta; Alexander and Margaret Stewart Trust","keywords":"Calreticulin; DNA vaccination; Cancer research; Antigen; Immunotherapy; Immunology; MHC class I; Biology; Cancer; CD8; Medicine; Immune system; Internal medicine","score_opus":0.05023108018379265,"score_gpt":0.3201335877642197,"score_spread":0.26990250758042705,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4235081779","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98341453,0.013413322,0.00041587834,0.0016573147,0.00084462186,0.00019645302,0.000009386348,0.00002534391,0.000023147604],"genre_scores_gemma":[0.9933158,0.003739368,0.00072455144,0.0016564123,0.00017808295,0.0000038261633,0.000029041084,0.000023950082,0.0003289568],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9967043,0.0009519943,0.0017221908,0.00023123383,0.0000881214,0.00030218004],"domain_scores_gemma":[0.9977195,0.0007095036,0.00086613395,0.00024378025,0.0003429864,0.000118073316],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023804477,0.00021809386,0.0006948953,0.00022035767,0.00024816123,0.000048632453,0.0002714324,0.00022482967,0.00024724938],"category_scores_gemma":[0.0012625301,0.00017856738,0.00022439727,0.00039160202,0.0002174702,0.00022322992,0.000060624596,0.0005697752,0.000076422875],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018173254,0.0001503994,0.023081135,0.000006436297,0.00022538443,0.000037427017,0.0003475862,0.0000086200125,0.95858717,0.00003316366,0.0078303795,0.007874951],"study_design_scores_gemma":[0.0058723167,0.0021798164,0.44079232,0.00032555647,0.00012400051,0.0014224784,0.00033957945,0.000037409736,0.39960256,0.0002751434,0.14854759,0.0004812291],"about_ca_topic_score_codex":0.000051314848,"about_ca_topic_score_gemma":0.0000045110523,"teacher_disagreement_score":0.55898464,"about_ca_system_score_codex":0.000032501386,"about_ca_system_score_gemma":0.00016163132,"threshold_uncertainty_score":0.7281766},"labels":[],"label_agreement":null},{"id":"W4235864214","doi":"10.1172/jci200421838","title":"High-level β-globin expression and preferred intragenic integration after lentiviral transduction of human cord blood stem cells","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":102,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"Genentech; National Institutes of Health; Stem Cell Network","keywords":"Biology; Haematopoiesis; Stem cell; Cord blood; Viral vector; Transgene; Transduction (biophysics); Genetic enhancement; Molecular biology; Progenitor cell; Transplantation; Globin; CD34; Severe combined immunodeficiency; Myeloid; Virology; Gene; Cancer research; Immunology; Cell biology; Genetics; Recombinant DNA; Medicine","score_opus":0.08391455691124541,"score_gpt":0.36417505667063726,"score_spread":0.2802604997593918,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4235864214","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971768,0.0002808878,0.0019377818,0.00018093883,0.00024495934,0.00015896288,0.000010511029,0.0000033518759,0.0000057800194],"genre_scores_gemma":[0.9973238,0.0003051845,0.0018158455,0.00007333546,0.00039253876,0.000005035189,0.000020154315,0.000013151803,0.000050918243],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99808186,0.00031465298,0.0010075638,0.00019808183,0.00027705324,0.0001207818],"domain_scores_gemma":[0.9988311,0.000029325343,0.0005800892,0.00016919278,0.0002576669,0.00013263048],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011060096,0.000120459736,0.00026943543,0.00008181303,0.00004201865,0.000021944266,0.00012416617,0.000222447,0.000013775265],"category_scores_gemma":[0.000075603115,0.000100245175,0.00014846011,0.000083902276,0.0002261169,0.000032555177,0.000026289825,0.00028556713,0.0000010510342],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023735913,0.00016219896,0.0011388416,0.000023018712,0.00006211857,0.0000024570097,0.000083762796,0.000120263336,0.98789436,0.00002014902,0.000056464807,0.008062756],"study_design_scores_gemma":[0.0025524779,0.0073162112,0.008472279,0.00012848242,0.000061721155,0.000013322374,0.000047903868,0.000009005816,0.9799238,0.001363048,0.000018857967,0.00009292123],"about_ca_topic_score_codex":0.000010259305,"about_ca_topic_score_gemma":0.00006010131,"teacher_disagreement_score":0.007970609,"about_ca_system_score_codex":0.000014926694,"about_ca_system_score_gemma":0.0001571767,"threshold_uncertainty_score":0.40878797},"labels":[],"label_agreement":null},{"id":"W4236064436","doi":"10.1172/jci200523334","title":"Glycyrrhizic acid alters Kaposi sarcoma–associated herpesvirus latency, triggering p53-mediated apoptosis in transformed B lymphocytes","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":104,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Center for AIDS Research, University of Washington; York University; National Institute of Allergy and Infectious Diseases; Elsa U. Pardee Foundation","keywords":"Lytic cycle; Virus latency; Biology; Virology; Kaposi's sarcoma-associated herpesvirus; Apoptosis; Cell cycle checkpoint; Carcinogenesis; Cancer research; Latent Virus; Immunology; Gene; Viral replication; Cell cycle; Virus; Herpesviridae; Genetics","score_opus":0.0776230949872205,"score_gpt":0.38079920013569046,"score_spread":0.30317610514846993,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4236064436","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99038655,0.0008383115,0.000046855363,0.007363288,0.000287942,0.0003885915,0.0000104312585,0.000040678566,0.000637378],"genre_scores_gemma":[0.9937788,0.0021183924,0.0013582545,0.0018133956,0.00071053306,0.000010430881,0.000029618372,0.000044327728,0.00013621854],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9946686,0.00043210678,0.0030457277,0.00030740534,0.0010043571,0.0005417748],"domain_scores_gemma":[0.9966265,0.001025444,0.00090026733,0.00022964177,0.000445592,0.00077255507],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004087418,0.00026638794,0.001177297,0.0006103515,0.00008959215,0.000067034765,0.00025730094,0.00046285972,0.00023062824],"category_scores_gemma":[0.0039405534,0.00021898984,0.00053482474,0.00091714633,0.00028243114,0.00061872235,0.00003165245,0.0013167975,0.00009678853],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010606293,0.0032846986,0.44041228,0.0003495926,0.0012145188,0.00031652767,0.0027093512,0.00057426555,0.17830817,0.0001539597,0.004513972,0.35755637],"study_design_scores_gemma":[0.060450103,0.005071228,0.6169146,0.0030892976,0.0007081426,0.00024344656,0.00045123795,0.022470651,0.25096336,0.0016213151,0.036898457,0.0011181716],"about_ca_topic_score_codex":0.00016440799,"about_ca_topic_score_gemma":0.00024940583,"teacher_disagreement_score":0.3564382,"about_ca_system_score_codex":0.0006209485,"about_ca_system_score_gemma":0.0012055392,"threshold_uncertainty_score":0.89301467},"labels":[],"label_agreement":null},{"id":"W4236765824","doi":"10.1172/jci0213946","title":"Insulin signaling coordinately regulates cardiac size, metabolism, and contractile protein isoform expression","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cardiovascular Function and Risk Factors","field":"Medicine","cited_by":337,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institutes of Health; American Diabetes Association","keywords":"GLUT4; Internal medicine; Endocrinology; Insulin receptor; Insulin; Biology; Glucose uptake; GLUT1; Glucose transporter; Carbohydrate metabolism; Glycolysis; Metabolism; Insulin resistance; Medicine","score_opus":0.053149278519857374,"score_gpt":0.31416502144666303,"score_spread":0.2610157429268056,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4236765824","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944277,0.002723147,0.00019200101,0.0013886614,0.0007275688,0.00029002546,0.0000025459403,0.00002446481,0.00022390655],"genre_scores_gemma":[0.99471647,0.0010464491,0.0022640862,0.00035960783,0.0010897566,0.0000036807023,0.0000025844695,0.00001872719,0.0004986441],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99769974,0.00024656413,0.0012514157,0.00017417877,0.00048304192,0.00014507592],"domain_scores_gemma":[0.9975828,0.00063117425,0.0007801433,0.0001666703,0.00042783856,0.0004114049],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019456226,0.00014124435,0.00080904405,0.000101625,0.00008257245,0.000041384705,0.000050227398,0.00023656536,0.00016902687],"category_scores_gemma":[0.0053602965,0.00009812821,0.0005351219,0.00016525052,0.00017779149,0.00034495167,0.000020552934,0.0006270804,0.000011911395],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027195057,0.0009011465,0.25456703,0.00038805426,0.002299891,0.00019890866,0.0013745105,0.0002842185,0.56103647,0.00034538878,0.023005454,0.15287942],"study_design_scores_gemma":[0.006952122,0.0009182307,0.72515535,0.0011872036,0.0011371217,0.00026011682,0.0004020814,0.0012287594,0.19659838,0.0011441229,0.064674124,0.00034236733],"about_ca_topic_score_codex":0.000010020051,"about_ca_topic_score_gemma":3.9585427e-7,"teacher_disagreement_score":0.47058836,"about_ca_system_score_codex":0.000024926796,"about_ca_system_score_gemma":0.00007548285,"threshold_uncertainty_score":0.6417163},"labels":[],"label_agreement":null},{"id":"W4237732428","doi":"10.1172/jci0213359","title":"Dual gene therapy with SERCA1 and Kir2.1 abbreviates excitation without suppressing contractility","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; Universidad Nacional de La Plata; Heart and Stroke Foundation of Canada; Johns Hopkins University; American Heart Association","keywords":"Contractility; Repolarization; Heart failure; Medicine; Calcium; Heartbeat; Internal medicine; Cardiology; Endocrinology; Biology; Electrophysiology; Computer science","score_opus":0.11217918224794764,"score_gpt":0.3970746762504384,"score_spread":0.28489549400249076,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4237732428","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963597,0.0019661814,0.00030774815,0.0010813007,0.000088576795,0.00013427786,0.0000029565404,0.0000044178973,0.000054835436],"genre_scores_gemma":[0.9942715,0.0021727565,0.0022970818,0.0005957335,0.00055872963,0.0000028889574,0.000010991797,0.000016573442,0.00007371696],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982712,0.00044621248,0.00066309184,0.00019388463,0.00028179053,0.0001437929],"domain_scores_gemma":[0.99860156,0.00014786757,0.00052459777,0.00016745407,0.00036375996,0.00019478553],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015833578,0.00011711835,0.00026235072,0.000045235432,0.00007281401,0.00005729185,0.00009143832,0.0001502034,0.000033114295],"category_scores_gemma":[0.00055610563,0.000085345666,0.00008079931,0.0000743723,0.00029233404,0.000032663906,0.000016341257,0.00027572113,0.0000023568973],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003952237,0.00018844279,0.17579678,0.000017913573,0.00020146793,0.000011013955,0.0001523493,0.00009232607,0.78576547,0.000006596015,0.000600521,0.03321491],"study_design_scores_gemma":[0.0066020405,0.012096219,0.3164513,0.00010462158,0.000061854065,0.00018571405,0.0000828688,0.0017313515,0.65870076,0.0011854821,0.0024937168,0.00030402912],"about_ca_topic_score_codex":0.0000029373653,"about_ca_topic_score_gemma":0.000016773214,"teacher_disagreement_score":0.14065455,"about_ca_system_score_codex":0.00000875507,"about_ca_system_score_gemma":0.000095013966,"threshold_uncertainty_score":0.34802952},"labels":[],"label_agreement":null},{"id":"W4238011279","doi":"10.1172/jci200114661","title":"Putting the brakes on arthritis: can suppressors of cytokine signaling (SOCS) suppress rheumatoid arthritis?","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cytokine Signaling Pathways and Interactions","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"","keywords":"Rheumatoid arthritis; Cytokine; SOCS3; Arthritis; Suppressor of cytokine signaling 1; Medicine; Suppressor; Immunology; Signal transduction; Cancer research; Biology; Internal medicine; Cell biology; Cancer","score_opus":0.07225411668738342,"score_gpt":0.35629479170852285,"score_spread":0.28404067502113944,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4238011279","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98922324,0.000630243,0.00019675712,0.008354079,0.00091258844,0.00019915242,0.00001739804,0.000022182545,0.00044437347],"genre_scores_gemma":[0.9937638,0.0022463405,0.0014758556,0.0012585607,0.0011564564,0.000004292458,0.000015428921,0.000028190056,0.000051069095],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99602777,0.0003352108,0.0025361024,0.00020401792,0.0006637121,0.00023318698],"domain_scores_gemma":[0.99522805,0.0017027389,0.0018010149,0.00028463776,0.00069307064,0.00029047937],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022717826,0.00018369812,0.000773973,0.00017942881,0.00014752238,0.000054455453,0.00019272389,0.00016273838,0.00020884453],"category_scores_gemma":[0.004748988,0.00012788243,0.00049683,0.00027586482,0.00032665758,0.00023981734,0.000029803256,0.0010055586,0.000007844753],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021398715,0.0017532522,0.16134113,0.00016808521,0.0010221695,0.0005410052,0.002883244,0.006357646,0.6582949,0.0028802715,0.018448822,0.1441696],"study_design_scores_gemma":[0.014620649,0.008309061,0.13205336,0.01963539,0.00036302567,0.004281317,0.002036084,0.0038771944,0.7613169,0.012644742,0.040260084,0.0006021869],"about_ca_topic_score_codex":0.00006475593,"about_ca_topic_score_gemma":0.000043557313,"teacher_disagreement_score":0.1435674,"about_ca_system_score_codex":0.000034665918,"about_ca_system_score_gemma":0.00027054924,"threshold_uncertainty_score":0.5685325},"labels":[],"label_agreement":null},{"id":"W4238609105","doi":"10.1172/jci0215420","title":"Rab proteins mediate Golgi transport of caveola-internalized glycosphingolipids and correct lipid trafficking in Niemann-Pick C cells","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":378,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Caprion (Canada)","funders":"U.S. Public Health Service; American Heart Association","keywords":"Lactosylceramide; Caveolae; Golgi apparatus; Sphingolipid; Cell biology; Rab; Lipid raft; Sphingomyelin; Ceramide; Biology; Pinocytosis; Vesicular transport protein; Clathrin; Glycosphingolipid; Endocytosis; Chemistry; Vesicle; Biochemistry; Signal transduction; Receptor; Glycolipid; Cholesterol; GTPase; Membrane; Endoplasmic reticulum","score_opus":0.03484175087733286,"score_gpt":0.2877694204625575,"score_spread":0.2529276695852246,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4238609105","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99462163,0.00057607726,0.003830781,0.00020667489,0.0005016611,0.00016688614,0.0000038976173,0.000003775364,0.00008863844],"genre_scores_gemma":[0.9969831,0.0012237488,0.0009801746,0.0001480116,0.00050655607,0.0000021762105,0.000054191623,0.000013507418,0.0000884967],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99779683,0.00014682543,0.0014805868,0.0001942994,0.00023826101,0.00014321801],"domain_scores_gemma":[0.9987399,0.000055642864,0.0007706153,0.00013109049,0.00013923197,0.0001635142],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012465864,0.0001354267,0.00043641098,0.00008510009,0.000021784856,0.000009765596,0.00013709746,0.00024622589,0.000032617],"category_scores_gemma":[0.00022027845,0.000120674216,0.00023051641,0.00010336124,0.00017717636,0.000020341067,0.000010389024,0.00031599528,0.0000011422196],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005614061,0.00021551039,0.1853046,0.0001160279,0.00008190642,0.00002865599,0.0008080642,0.00040231243,0.80732584,0.000023637645,0.00013998811,0.004992048],"study_design_scores_gemma":[0.011895996,0.0037060347,0.18904151,0.0010342553,0.00030498125,0.00012351814,0.00022884902,0.0067386786,0.76554567,0.00048008066,0.020227525,0.00067289814],"about_ca_topic_score_codex":0.000028362061,"about_ca_topic_score_gemma":0.00011414959,"teacher_disagreement_score":0.041780174,"about_ca_system_score_codex":0.000010023715,"about_ca_system_score_gemma":0.00006139184,"threshold_uncertainty_score":0.49209517},"labels":[],"label_agreement":null},{"id":"W4238924286","doi":"10.1172/jci200522486","title":"Ikaros integrates endocrine and immune system development","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Neuroblastoma Research and Treatments","field":"Medicine","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network; Sunnybrook Health Science Centre; Health Sciences Centre; Mount Sinai Hospital; Ontario Institute for Cancer Research","funders":"Canadian Institutes of Health Research","keywords":"Immune system; Hormone; Glucocorticoid; Biology; Lymphopoiesis; Endocrine system; Population; Endocrinology; Proopiomelanocortin; Transcription factor; Haematopoiesis; Internal medicine; Immunology; Adrenocorticotropic hormone; Medicine; Stem cell; Gene; Cell biology; Genetics","score_opus":0.0809858429001423,"score_gpt":0.4030542107000146,"score_spread":0.32206836779987236,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4238924286","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961143,0.00040427461,0.00006546657,0.0027978239,0.000121912315,0.00012326462,4.891151e-7,0.000012581013,0.00035985015],"genre_scores_gemma":[0.9871169,0.00009617146,0.011883127,0.00020505302,0.00035718762,0.0000024035369,0.000003011168,0.00000823492,0.0003279383],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9983005,0.00010210607,0.0010667813,0.00009695723,0.00030989875,0.00012374486],"domain_scores_gemma":[0.99867886,0.00023986773,0.0003815663,0.00008265293,0.00024356441,0.00037346504],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00075359445,0.00008283882,0.00035335714,0.00009952683,0.00004174181,0.000021123653,0.000047081572,0.000045154087,0.000015467605],"category_scores_gemma":[0.00084731664,0.00005406629,0.00008582766,0.00008243455,0.000105993386,0.00015403873,0.000023253728,0.0003296164,0.000032421074],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025980338,0.00126459,0.42803955,0.00056868483,0.0010983289,0.0012684438,0.0005428761,0.000019611314,0.04153621,0.0020432363,0.0024744754,0.5185459],"study_design_scores_gemma":[0.00789812,0.0023950264,0.744492,0.0012208496,0.00016325685,0.0020706593,0.00017750448,0.0007885212,0.22997369,0.0002592315,0.010434035,0.00012708797],"about_ca_topic_score_codex":0.000002937588,"about_ca_topic_score_gemma":0.0000028117336,"teacher_disagreement_score":0.51841885,"about_ca_system_score_codex":0.000066529676,"about_ca_system_score_gemma":0.00029250747,"threshold_uncertainty_score":0.22047594},"labels":[],"label_agreement":null},{"id":"W4239079406","doi":"10.1172/jci200317423","title":"Glomerular-specific alterations of VEGF-A expression lead to distinct congenital and acquired renal diseases","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Renal Diseases and Glomerulopathies","field":"Medicine","cited_by":109,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network; St. Michael's Hospital; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"National Institutes of Health; Kidney Foundation of Canada","keywords":"Podocyte; Glomerulus; Kidney disease; Biology; Renal function; Kidney; Glomerulopathy; Endocrinology; Pathology; Glomerulonephritis; Internal medicine; Proteinuria; Medicine","score_opus":0.06626429097389486,"score_gpt":0.3621689072289696,"score_spread":0.29590461625507475,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4239079406","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954664,0.0021273107,0.0008609982,0.0008742485,0.00028983442,0.0001746654,0.000023806602,0.000007818315,0.00017488457],"genre_scores_gemma":[0.99500436,0.0003544002,0.0038295249,0.00029861796,0.00039509908,0.0000034485963,0.00001530082,0.000011863179,0.00008740528],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977156,0.00023507066,0.0013366205,0.00016760854,0.00041907444,0.00012604379],"domain_scores_gemma":[0.99780303,0.0003714097,0.0006095848,0.00016742562,0.00042888612,0.00061966083],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005551567,0.00012384231,0.00051365595,0.00012780476,0.00006558067,0.00003199807,0.000056815883,0.000083577695,0.00005583735],"category_scores_gemma":[0.0031131047,0.0000907759,0.00023520076,0.00019459025,0.00027625856,0.0002269952,0.000020573203,0.00014651717,0.00000603854],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025192993,0.0010524153,0.80919844,0.00034878385,0.0002734005,0.00017361822,0.00058043696,0.00006877476,0.1481823,0.0023369666,0.011176384,0.024089167],"study_design_scores_gemma":[0.002596069,0.0016736484,0.96994394,0.00090442057,0.0003374404,0.00010184588,0.00017093474,0.000103623825,0.01630537,0.0030566137,0.004650107,0.00015598035],"about_ca_topic_score_codex":0.0000017280496,"about_ca_topic_score_gemma":0.0000012260134,"teacher_disagreement_score":0.1607455,"about_ca_system_score_codex":0.000017979362,"about_ca_system_score_gemma":0.00021271246,"threshold_uncertainty_score":0.3726902},"labels":[],"label_agreement":null},{"id":"W4239273155","doi":"10.1172/jci200317271","title":"Mechano-oxidative coupling by mitochondria induces proinflammatory responses in lung venular capillaries","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Erythrocyte Function and Pathophysiology","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"National Institutes of Health","keywords":"Proinflammatory cytokine; Oxidative phosphorylation; Mitochondrion; Lung; Oxidative stress; Chemistry; Cell biology; Inflammation; Biophysics; Medicine; Biology; Immunology; Internal medicine; Biochemistry","score_opus":0.06544586043290376,"score_gpt":0.364294336853772,"score_spread":0.2988484764208682,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4239273155","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99646705,0.0009034776,0.0002760347,0.001085599,0.0009730004,0.00018552868,0.0000017962436,0.000010672175,0.00009686173],"genre_scores_gemma":[0.9950423,0.00036977007,0.0029413928,0.0009921947,0.00040060066,0.0000049542214,0.000009055962,0.000015250223,0.0002244697],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99771094,0.00044923028,0.0012724948,0.0001570608,0.00026933325,0.00014095008],"domain_scores_gemma":[0.9977711,0.00076162367,0.000841451,0.00012632881,0.0002972405,0.00020227995],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0020227577,0.000114342314,0.00051344023,0.00016137281,0.000048808688,0.000014136652,0.000057032066,0.00024879994,0.000050967046],"category_scores_gemma":[0.008571191,0.00009349701,0.00013328611,0.00019786549,0.00019209072,0.00019806741,0.000009451837,0.00070059777,0.000010190727],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027131601,0.00033351412,0.23365347,0.00017749966,0.00019410785,0.00020031458,0.0011396826,0.00019530722,0.7456499,0.0020292168,0.013180315,0.0005335631],"study_design_scores_gemma":[0.018663753,0.00647554,0.353028,0.0027473313,0.00062136137,0.00070274965,0.0027091575,0.0031790005,0.54675275,0.025828384,0.038456146,0.0008358076],"about_ca_topic_score_codex":0.0000031358043,"about_ca_topic_score_gemma":0.0000029418745,"teacher_disagreement_score":0.19889708,"about_ca_system_score_codex":0.000058805752,"about_ca_system_score_gemma":0.0006305401,"threshold_uncertainty_score":0.99978006},"labels":[],"label_agreement":null},{"id":"W4239675108","doi":"10.1172/jci200114498","title":"The clinical relevance of glycobiology","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"","keywords":"Glycobiology; Relevance (law); Computational biology; Data science; Medicine; Biology; Computer science; Political science; Biochemistry; Glycan; Law","score_opus":0.09962641154073734,"score_gpt":0.43890452859659823,"score_spread":0.33927811705586086,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4239675108","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943531,0.00062482443,0.0010318059,0.0026257874,0.00065861485,0.000098663775,0.0000012927837,0.000001948878,0.00060391903],"genre_scores_gemma":[0.99164563,0.004591705,0.0014934808,0.00042801822,0.0011073169,0.0000016765272,0.000006192939,0.000007858623,0.00071811647],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9971884,0.0006309591,0.0016767534,0.00013481555,0.0002317698,0.00013729345],"domain_scores_gemma":[0.99731153,0.00063556945,0.0010153493,0.0002519325,0.00062991236,0.00015568387],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.004696614,0.000070315924,0.00025371875,0.000030592026,0.00006480117,0.000013051575,0.00028647544,0.0002284543,0.000015853975],"category_scores_gemma":[0.011745159,0.00004451613,0.0002627344,0.00011740436,0.0005817815,0.000007757571,0.000055756995,0.00036703606,0.000009790053],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0033999956,0.00033489335,0.63037103,0.000022356431,0.0002998832,0.000022077378,0.00003193842,0.00016983539,0.09912072,0.0021718,0.03373865,0.2303168],"study_design_scores_gemma":[0.0023802645,0.0035091587,0.22586706,0.00005310178,0.00003197579,0.00011158597,0.000051422194,0.00031358405,0.026899146,0.006056217,0.7345897,0.00013675493],"about_ca_topic_score_codex":0.0000034498228,"about_ca_topic_score_gemma":0.000019089477,"teacher_disagreement_score":0.7008511,"about_ca_system_score_codex":0.0000048926545,"about_ca_system_score_gemma":0.00030362507,"threshold_uncertainty_score":0.99657935},"labels":[],"label_agreement":null},{"id":"W4239928813","doi":"10.1172/jci200318397","title":"Salt-sensitive hypertension: if only it were as simple as rocket science","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Sodium Intake and Health","field":"Nursing","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute","funders":"","keywords":"Rocket (weapon); Simple (philosophy); Salt (chemistry); Medicine; Aeronautics; Data science; Computer science; Chemistry; Engineering; Philosophy","score_opus":0.13026708466631967,"score_gpt":0.42635889791319437,"score_spread":0.2960918132468747,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4239928813","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9720406,0.000058018937,0.000059810543,0.020389605,0.002732292,0.00014195382,0.000001348922,0.000021433007,0.0045549194],"genre_scores_gemma":[0.9648473,0.000056607754,0.002415726,0.031530194,0.0009966427,5.558363e-7,0.0000023722746,0.000018643626,0.00013192091],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99621165,0.00052101153,0.0017312439,0.0002918749,0.0008899986,0.00035420997],"domain_scores_gemma":[0.9952595,0.0013062109,0.001268393,0.00025969688,0.001163225,0.0007429344],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.004921669,0.00015660023,0.0005443427,0.00019261679,0.0003630216,0.0000974806,0.00022322139,0.00020792964,0.00011926079],"category_scores_gemma":[0.017407242,0.00012887447,0.00021830936,0.0004724658,0.0006371321,0.00067058334,0.000025514288,0.00087847246,0.0002631892],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0060745007,0.00214299,0.30105177,0.00024426632,0.0002872639,0.0011252789,0.00937716,0.00054411666,0.04976176,0.03233146,0.36666518,0.23039427],"study_design_scores_gemma":[0.006243515,0.009471475,0.44603628,0.0009944527,0.0004160612,0.0050472235,0.0046673506,0.0019709733,0.13083608,0.24653643,0.1468798,0.0009003326],"about_ca_topic_score_codex":0.0000871294,"about_ca_topic_score_gemma":0.000030058853,"teacher_disagreement_score":0.22949393,"about_ca_system_score_codex":0.00013580763,"about_ca_system_score_gemma":0.0018953979,"threshold_uncertainty_score":0.9908696},"labels":[],"label_agreement":null},{"id":"W4239936636","doi":"10.1172/jci200319504","title":"Mammary-specific deletion of parathyroid hormone–related protein preserves bone mass during lactation","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Bone health and treatments","field":"Medicine","cited_by":170,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Cancer Institute; National Institutes of Health; Yale University","keywords":"Lactation; Endocrinology; Internal medicine; Parathyroid hormone-related protein; Mammary gland; Bone resorption; Bone remodeling; Offspring; Biology; Parathyroid hormone; Genetically modified mouse; Transgene; Calcium; Pregnancy; Medicine; Gene; Cancer","score_opus":0.06999822060789593,"score_gpt":0.35805086183207524,"score_spread":0.2880526412241793,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4239936636","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99537206,0.0016520356,0.00050652557,0.0015552299,0.00012819844,0.00042565458,0.0000013884595,0.000014493944,0.0003444146],"genre_scores_gemma":[0.9860007,0.00065628823,0.01278884,0.00007471187,0.00008021647,0.000007736877,0.000013536951,0.000014379022,0.00036359753],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99679875,0.00038406922,0.0020731864,0.00014936006,0.00043352926,0.00016112356],"domain_scores_gemma":[0.9972668,0.00014845292,0.0016161434,0.00017652502,0.00044411665,0.00034791828],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014692401,0.000117870135,0.0005086534,0.00014954574,0.00005217227,0.000013517783,0.00005172918,0.00022010897,0.000017989154],"category_scores_gemma":[0.0014394172,0.00009529176,0.00019555016,0.000247862,0.00009818758,0.00036485493,0.0000065098548,0.00044303742,0.000011424543],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0049851756,0.0018722423,0.2327278,0.00059288647,0.00059578504,0.00038553294,0.0005468456,0.00017717486,0.7407949,0.0077580973,0.0021136135,0.0074499636],"study_design_scores_gemma":[0.008639498,0.0024124153,0.9241101,0.00035899068,0.00013477523,0.00018914102,0.00003988397,0.00021506172,0.050938964,0.012111586,0.0007361199,0.00011342978],"about_ca_topic_score_codex":0.0000066666694,"about_ca_topic_score_gemma":0.000001322643,"teacher_disagreement_score":0.69138235,"about_ca_system_score_codex":0.00006068297,"about_ca_system_score_gemma":0.00031517938,"threshold_uncertainty_score":0.38858852},"labels":[],"label_agreement":null},{"id":"W4240293768","doi":"10.1172/jci200523858","title":"Cholesterol binding, efflux, and a PDZ-interacting domain of scavenger receptor–BI mediate HDL-initiated signaling","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Sphingolipid Metabolism and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"National Institutes of Health; Pfizer; American Heart Association","keywords":"Scavenger receptor; Enos; Cholesterol; PDZ domain; Cell biology; Chemistry; Biochemistry; Receptor; ABCA1; Biophysics; Biology; Lipoprotein; Transporter; Nitric oxide synthase","score_opus":0.0510693684934658,"score_gpt":0.35038913650931597,"score_spread":0.29931976801585014,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4240293768","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978419,0.00040267326,0.00059435505,0.00042211323,0.00058367784,0.00007956296,0.000004940227,0.000004866113,0.00006594076],"genre_scores_gemma":[0.98691773,0.0003414303,0.009862509,0.0004461292,0.0023578217,0.0000014291246,0.000022330434,0.000020003981,0.000030642022],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99752647,0.00033293985,0.0015226476,0.00019898723,0.0002504459,0.00016854076],"domain_scores_gemma":[0.99761164,0.0002788877,0.0014634354,0.00013397046,0.0002860034,0.00022608733],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029555329,0.00014236735,0.00042274024,0.00010733756,0.000057090274,0.000036123965,0.00015014212,0.00022227393,0.00002446523],"category_scores_gemma":[0.002376967,0.00012306563,0.00019107919,0.00010025458,0.00015744645,0.00004143081,0.0000518474,0.0003471881,0.00000391681],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014759813,0.00006134235,0.03043847,0.000031886986,0.00011281966,0.0000011298578,0.0003251364,0.00024080291,0.96308595,0.000021993661,0.00040221118,0.0051306626],"study_design_scores_gemma":[0.0034950937,0.0006221064,0.015999423,0.0005705362,0.00013794992,0.000059972812,0.00032279742,0.00047458676,0.96865886,0.00022582202,0.009170277,0.00026256498],"about_ca_topic_score_codex":0.0000042709967,"about_ca_topic_score_gemma":0.0000039605984,"teacher_disagreement_score":0.014439046,"about_ca_system_score_codex":0.0000093832,"about_ca_system_score_gemma":0.00011765002,"threshold_uncertainty_score":0.5018471},"labels":[],"label_agreement":null},{"id":"W4240575818","doi":"10.1172/jci200215748","title":"Increased ABCA1 activity protects against atherosclerosis","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cholesterol and Lipid Metabolism","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; Xenon Pharmaceuticals (Canada); Children's & Women's Health Centre of British Columbia; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"ABCA1; Efflux; Cholesterol; Reverse cholesterol transport; Apolipoprotein E; Genetically modified mouse; Phospholipid; Transgene; Chemistry; Biology; In vivo; Transporter; Endocrinology; Lipoprotein; Internal medicine; Biochemistry; Medicine; Gene; Genetics","score_opus":0.14440987041581818,"score_gpt":0.35980648760842343,"score_spread":0.21539661719260525,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4240575818","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99426025,0.00010911121,0.0001515945,0.0039999224,0.0005692419,0.00021851962,0.0000015028254,0.000021824633,0.00066800794],"genre_scores_gemma":[0.9918452,0.0002926098,0.0023063004,0.003139143,0.002130045,0.0000035471376,0.0000013213757,0.000017024384,0.0002648115],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99791366,0.0002841503,0.0010529759,0.00014871512,0.00045110765,0.00014938028],"domain_scores_gemma":[0.99780625,0.00026738876,0.00094783684,0.00020615877,0.0002797978,0.0004925731],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015777427,0.00012397749,0.0005878485,0.00010169895,0.000049205606,0.0000273363,0.00009246725,0.00019295864,0.00008776488],"category_scores_gemma":[0.0030520798,0.00009128647,0.00033035988,0.0001952744,0.00016566293,0.00028214243,0.000018934352,0.00072994345,0.000047696496],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008676322,0.0020587104,0.2684181,0.00020566591,0.0003572977,0.00005560855,0.0007019369,0.000032079355,0.3470549,0.000100814475,0.012207147,0.3679401],"study_design_scores_gemma":[0.0043994677,0.0006648696,0.96732897,0.00037835524,0.00013586247,0.00004680568,0.000013829622,0.0015776491,0.014373756,0.00026515135,0.010704785,0.00011051422],"about_ca_topic_score_codex":0.00000862315,"about_ca_topic_score_gemma":0.0000016303854,"teacher_disagreement_score":0.69891083,"about_ca_system_score_codex":0.00003078116,"about_ca_system_score_gemma":0.00009744422,"threshold_uncertainty_score":0.37225544},"labels":[],"label_agreement":null},{"id":"W4240706633","doi":"10.1172/jci200316510","title":"Endothelium-derived Toll-like receptor-4 is the key molecule in LPS-induced neutrophil sequestration into lungs","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Neonatal Respiratory Health Research","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; Fondation pour la Recherche Médicale","keywords":"Toll-like receptor; Endothelium; Receptor; Immunology; Medicine; Chemistry; Innate immune system; Internal medicine","score_opus":0.14493379602832548,"score_gpt":0.44348264421976286,"score_spread":0.29854884819143734,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4240706633","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9764552,0.00047193113,0.00008831319,0.021404518,0.0005432903,0.0004945406,0.0000012113036,0.000011665662,0.0005293466],"genre_scores_gemma":[0.9838727,0.0005874227,0.002670972,0.012137655,0.0005274153,0.000013134567,0.0000037853104,0.000028709528,0.00015820008],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99526334,0.0012403455,0.002034548,0.00024609358,0.0009264722,0.00028920284],"domain_scores_gemma":[0.9966766,0.0009379879,0.00086100865,0.00033277864,0.0006284363,0.0005631412],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0053121266,0.0001606089,0.00051669654,0.0002067318,0.000096782904,0.00004366284,0.00019960036,0.000266921,0.00012384719],"category_scores_gemma":[0.008568457,0.000111043584,0.00020777089,0.00044352518,0.00024134023,0.0003165666,0.00002482873,0.001473246,0.000060780036],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002613361,0.0006266515,0.06353997,0.0005037804,0.00017301741,0.0003517278,0.0025548034,0.000050111554,0.8856887,0.0038068425,0.00526271,0.03482831],"study_design_scores_gemma":[0.016996425,0.010668847,0.18223193,0.0017158648,0.00023128641,0.00042243625,0.0008783425,0.0015456141,0.63399106,0.021865757,0.12878147,0.0006709639],"about_ca_topic_score_codex":0.000056933128,"about_ca_topic_score_gemma":0.000028113014,"teacher_disagreement_score":0.25169766,"about_ca_system_score_codex":0.00022294359,"about_ca_system_score_gemma":0.0021387734,"threshold_uncertainty_score":0.9997828},"labels":[],"label_agreement":null},{"id":"W4240738684","doi":"10.1172/jci200214060","title":"Human sex hormone–binding globulin variants associated with hyperandrogenism and ovarian dysfunction","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Hormonal and reproductive studies","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Institutes of Health Research; Western University","funders":"Canadian Institutes of Health Research; Fondation de France","keywords":"Sex hormone-binding globulin; Hyperandrogenism; Endocrinology; Internal medicine; Biology; Polycystic ovary; Proband; Androgen; Medicine; Genetics; Mutation; Insulin; Hormone; Gene; Insulin resistance","score_opus":0.10517156090991676,"score_gpt":0.338584032913545,"score_spread":0.23341247200362825,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4240738684","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948459,0.00053520856,0.00007217377,0.0031364986,0.0001736143,0.00012891882,0.0000017350097,0.000016090686,0.0010898128],"genre_scores_gemma":[0.9970462,0.00021539707,0.0007377011,0.00027908623,0.0008091017,0.0000013085877,0.0000035939931,0.000012677422,0.00089494867],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982514,0.00016535685,0.000878449,0.00019385671,0.0003773838,0.00013358211],"domain_scores_gemma":[0.9984989,0.00015515315,0.00066018465,0.000095824515,0.00035754874,0.00023237504],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015034075,0.00012168283,0.00053383614,0.000088606495,0.00016955328,0.000022875558,0.000038747065,0.00013709375,0.000025601666],"category_scores_gemma":[0.001555401,0.000078295685,0.000105115956,0.00018044369,0.00027125666,0.00018945489,0.000017664364,0.00047007803,0.0000069873713],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00088857306,0.0012318125,0.89653224,0.00006406251,0.002843164,0.0004626456,0.002459578,0.000029129424,0.06344236,0.00063738134,0.0066565652,0.024752462],"study_design_scores_gemma":[0.004730192,0.0026724818,0.9887113,0.00019941691,0.00046920835,0.00028861527,0.00017522044,0.00029242592,0.0005213429,0.0015188527,0.00030132526,0.0001195984],"about_ca_topic_score_codex":0.0000056247573,"about_ca_topic_score_gemma":0.0000028911745,"teacher_disagreement_score":0.09217905,"about_ca_system_score_codex":0.000039223207,"about_ca_system_score_gemma":0.00004396997,"threshold_uncertainty_score":0.31928053},"labels":[],"label_agreement":null},{"id":"W4240851324","doi":"10.1172/jci200215463","title":"Circulating levels of IGF-1 directly regulate bone growth and density","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Growth Hormone and Insulin-like Growth Factors","field":"Medicine","cited_by":89,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Royal Victoria Hospital","funders":"Novo Nordisk; National Institutes of Health; Aarhus Universitet","keywords":"Endocrinology; Internal medicine; Bone growth; Protein subunit; Pathophysiology; Growth factor; Cortical bone; Osteoporosis; Endocrine system; Biology; Chemistry; Receptor; Gene; Medicine; Anatomy; Biochemistry; Hormone","score_opus":0.12298556000926676,"score_gpt":0.33974059068095425,"score_spread":0.2167550306716875,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4240851324","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99617714,0.0005326145,0.00014826503,0.0021178625,0.0002581636,0.00010693429,0.0000021425426,0.000013310229,0.0006435922],"genre_scores_gemma":[0.994886,0.00026080402,0.0037010417,0.00063097564,0.0004340692,3.714855e-7,0.0000014444875,0.000015222043,0.000070092574],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9970887,0.00017735432,0.0019700492,0.00016312211,0.00044666798,0.00015414515],"domain_scores_gemma":[0.99706715,0.0005223717,0.0013929524,0.00015367375,0.0004815321,0.000382293],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014285411,0.00013251785,0.00076454075,0.00015714431,0.000054068925,0.000014757718,0.00006268255,0.00020541983,0.00003598805],"category_scores_gemma":[0.0051070936,0.00010562712,0.00024102097,0.00023753439,0.00029625933,0.00030115966,0.000029363819,0.00051206513,0.0000040554696],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002136774,0.00026369756,0.8506914,0.00025635553,0.00023755222,0.00016671333,0.00078113476,0.0000053901053,0.12581295,0.00061386847,0.0014340323,0.019523242],"study_design_scores_gemma":[0.0020563072,0.0008192293,0.95976585,0.00035028512,0.00024935344,0.00040159273,0.000041725394,0.0011107068,0.031227894,0.003789717,0.00007443634,0.0001128704],"about_ca_topic_score_codex":0.000012552441,"about_ca_topic_score_gemma":9.915817e-7,"teacher_disagreement_score":0.10907449,"about_ca_system_score_codex":0.00001994985,"about_ca_system_score_gemma":0.000082796854,"threshold_uncertainty_score":0.6114037},"labels":[],"label_agreement":null},{"id":"W4241254331","doi":"10.1172/jci200421846","title":"EphB6-null mutation results in compromised T cell function","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Axon Guidance and Neuronal Signaling","field":"Neuroscience","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal","funders":"Canadian Institutes of Health Research; Université de Montréal; Roche Organ Transplant Research Foundation; Kidney Foundation of Canada; Heart and Stroke Foundation of Canada","keywords":"Biology; Kinase; Immune system; Phosphorylation; T cell; T-cell receptor; Immunology; Cell biology","score_opus":0.1541023220908831,"score_gpt":0.37287259020978414,"score_spread":0.21877026811890105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4241254331","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99461126,0.000026158681,0.0017930478,0.0019901053,0.00076519034,0.00013125617,0.0000019470124,0.000015699881,0.0006653147],"genre_scores_gemma":[0.99595165,0.000053489362,0.001034061,0.0024834592,0.00041946932,0.0000015651267,0.0000021476685,0.000010766873,0.00004336333],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99692386,0.00036456663,0.001873693,0.00023147148,0.000453225,0.00015320104],"domain_scores_gemma":[0.9973481,0.0008996161,0.0013513226,0.0001095999,0.0001270501,0.00016430356],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018248921,0.00010334602,0.0002775979,0.00014940399,0.00006240874,0.000036142264,0.00015878965,0.000120777455,0.000009526667],"category_scores_gemma":[0.0043080817,0.00008977617,0.00013678744,0.0003589109,0.00013268355,0.0005446039,0.00001672669,0.00057372643,0.000044504723],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0031624797,0.0006234127,0.005327139,0.00004293867,0.0000073797682,0.00030369635,0.00058621797,0.047200028,0.932062,0.001893601,0.00061507896,0.008176042],"study_design_scores_gemma":[0.013896913,0.0024439886,0.10041807,0.00034457812,0.000043753687,0.00008192191,0.00008475073,0.0024716835,0.8129837,0.06564251,0.0013218194,0.00026632525],"about_ca_topic_score_codex":0.000011031661,"about_ca_topic_score_gemma":0.000006807123,"teacher_disagreement_score":0.1190783,"about_ca_system_score_codex":0.00005712427,"about_ca_system_score_gemma":0.00024665846,"threshold_uncertainty_score":0.51574874},"labels":[],"label_agreement":null},{"id":"W4241637932","doi":"10.1172/jci200525148","title":"Caffey disease: an unlikely collagenopathy","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Osteomyelitis and Bone Disorders Research","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Shriners Hospitals for Children - Canada; Montreal Children's Hospital","funders":"Shriners Hospitals for Children; McGill University","keywords":"Osteogenesis imperfecta; Missense mutation; Hyperostosis; Dentinogenesis imperfecta; Pathology; Connective tissue; Mutation; Ehlers–Danlos syndrome; Medicine; Genetics; Biology; Anatomy; Gene","score_opus":0.1258456460204865,"score_gpt":0.4478869165702676,"score_spread":0.32204127054978104,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4241637932","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9791688,0.000676252,0.000099424375,0.019019552,0.00020966276,0.00015699887,0.00000394276,0.0000117545815,0.00065362855],"genre_scores_gemma":[0.99024695,0.00033441934,0.004068164,0.002364445,0.002179054,0.0000016819985,0.00001580596,0.000015274582,0.00077420496],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9976879,0.00024149034,0.0011503904,0.00013803132,0.00061834964,0.00016388846],"domain_scores_gemma":[0.9976562,0.00018014407,0.00042223878,0.00019007112,0.00058125757,0.0009700874],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018956524,0.0000872431,0.00037946532,0.000114180075,0.00005361511,0.000036085687,0.00010656157,0.00010134584,0.00018793804],"category_scores_gemma":[0.0023759545,0.00006582241,0.00020307244,0.00017905665,0.00018470267,0.0003352461,0.00001794065,0.000410748,0.000049031394],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024974064,0.0013461694,0.61610925,0.0001422609,0.00013539757,0.0003721862,0.00043449673,0.00015499089,0.0072741173,0.00096813845,0.023127437,0.34743816],"study_design_scores_gemma":[0.0035438547,0.0024076798,0.9361248,0.00022332364,0.0001502034,0.000084438594,0.00015194701,0.0020247286,0.00058386865,0.002023725,0.052559596,0.00012182973],"about_ca_topic_score_codex":0.000005713084,"about_ca_topic_score_gemma":0.000013439642,"teacher_disagreement_score":0.34731632,"about_ca_system_score_codex":0.000041272182,"about_ca_system_score_gemma":0.0008069585,"threshold_uncertainty_score":0.2844411},"labels":[],"label_agreement":null},{"id":"W4243628135","doi":"10.1172/jci200316409","title":"Prediction of spontaneous autoimmune diabetes in NOD mice by quantification of autoreactive T cells in peripheral blood","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Diabetes and associated disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":215,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of Calgary; University of Alberta; Simon Fraser University; University of British Columbia","funders":"Canadian Institutes of Health Research; University of British Columbia; Fondation pour la Recherche Médicale; Children's Hospital Foundation; Michael Smith Health Research BC; Canadian Diabetes Association","keywords":"Immunology; Peripheral blood; NOD mice; Autoimmunity; Type 1 diabetes; Major histocompatibility complex; Autoimmune diabetes; Nod; Avidity; Diabetes mellitus; Autoimmune disease; Medicine; Peripheral; Antigen; Biology; Immune system; Endocrinology; Antibody; Internal medicine","score_opus":0.020659726289164557,"score_gpt":0.2762189708846089,"score_spread":0.2555592445954443,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4243628135","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990683,0.0003972267,0.00003843251,0.0000767616,0.00019796992,0.00008883822,0.000021593132,0.0000013672308,0.00010951338],"genre_scores_gemma":[0.99919534,0.00019938312,0.00044491317,0.000047192276,0.000029430445,0.0000017851247,0.000039642644,0.000008176952,0.000034145145],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981055,0.00030065808,0.0012099571,0.0001261242,0.00014826914,0.000109469605],"domain_scores_gemma":[0.99851084,0.00010343667,0.0010747247,0.00009025757,0.00017381551,0.000046933925],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012631948,0.00008060091,0.0003027702,0.00006561153,0.00000982637,0.0000058982887,0.000088843735,0.00020518406,0.0000052338232],"category_scores_gemma":[0.0011326624,0.000077674886,0.0001171932,0.00014455526,0.00011050608,0.00001619683,0.000008629745,0.00018314387,2.3991407e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004643599,0.0003788677,0.1800747,0.000016783808,0.00004811792,0.0000012576786,0.000056048182,0.00040876417,0.81841123,0.000028627688,0.00013592103,0.00039321466],"study_design_scores_gemma":[0.0020987194,0.00094640884,0.26926604,0.00013270907,0.00005864816,0.0000035654316,0.00017495119,0.00085776445,0.7254923,0.00048114656,0.0003933742,0.00009435774],"about_ca_topic_score_codex":0.00002402036,"about_ca_topic_score_gemma":0.000019931582,"teacher_disagreement_score":0.09291895,"about_ca_system_score_codex":0.000016326505,"about_ca_system_score_gemma":0.0001478496,"threshold_uncertainty_score":0.31674898},"labels":[],"label_agreement":null},{"id":"W4244218181","doi":"10.1172/jci200523219","title":"Effects of the PPARγ agonist pioglitazone on lipoprotein metabolism in patients with type 2 diabetes mellitus","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Peroxisome Proliferator-Activated Receptors","field":"Biochemistry, Genetics and Molecular Biology","cited_by":165,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute","funders":"National Center for Research Resources; National Heart, Lung, and Blood Institute; National Institutes of Health; Deutsches Krebsforschungszentrum; Takeda Pharmaceuticals North America","keywords":"Very low-density lipoprotein; Endocrinology; Lipolysis; Internal medicine; Lipoprotein lipase; Pioglitazone; Chemistry; Apolipoprotein B; Lipoprotein; Insulin resistance; Insulin; Diabetes mellitus; Adipose tissue; Medicine; Type 2 diabetes; Cholesterol","score_opus":0.011448691505976404,"score_gpt":0.26987557982307353,"score_spread":0.25842688831709715,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4244218181","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985343,0.00053137896,0.000007583262,0.00036554525,0.00033248076,0.00019640826,0.0000017753108,0.0000018212062,0.000028707635],"genre_scores_gemma":[0.9982334,0.000099994955,0.0007492201,0.00045731457,0.000418729,0.0000031925815,0.000005856843,0.000013275149,0.00001904486],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984248,0.0003214086,0.0007129114,0.00013750975,0.0002775708,0.00012577989],"domain_scores_gemma":[0.99868,0.0000952079,0.00069928804,0.00017087822,0.00025456134,0.000100047466],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00059183047,0.000112052614,0.0002908808,0.000049687103,0.000027565498,0.000010728808,0.000181733,0.00017232048,0.0000037811872],"category_scores_gemma":[0.0015500018,0.00006674485,0.00010863241,0.00017333167,0.00018249823,0.000015013274,0.00003315411,0.0003161634,0.0000022983168],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014289527,0.0010580459,0.5056158,0.00007692954,0.0002860849,8.960613e-7,0.000094268835,0.00067094096,0.46778145,0.000077032586,0.0007485003,0.02216113],"study_design_scores_gemma":[0.0013829264,0.00084688293,0.31084415,0.000102150014,0.000029196597,2.3730904e-7,0.0000024502813,0.00001174241,0.6851814,0.000096363794,0.001438539,0.00006393643],"about_ca_topic_score_codex":0.0000028549227,"about_ca_topic_score_gemma":0.0000047889866,"teacher_disagreement_score":0.21739995,"about_ca_system_score_codex":0.000018341643,"about_ca_system_score_gemma":0.00015473286,"threshold_uncertainty_score":0.2721776},"labels":[],"label_agreement":null},{"id":"W4244256516","doi":"10.1172/jci200421623","title":"West Nile virus: a growing concern?","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"West Nile virus; Geography; Virology; Virus; Epidemiology; Ecology; Environmental protection; Biology; Medicine","score_opus":0.08991115154285552,"score_gpt":0.4029599011995962,"score_spread":0.3130487496567407,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4244256516","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98781943,0.00058476266,0.00067944877,0.009735505,0.0005932142,0.00012515238,0.0000022784675,0.00001583517,0.00044435184],"genre_scores_gemma":[0.9885396,0.000114250746,0.0013817061,0.007848078,0.002010989,0.0000020929317,0.0000050838094,0.000012806534,0.00008540649],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998017,0.00008230486,0.0012635392,0.00012525942,0.00037898458,0.00013292673],"domain_scores_gemma":[0.99819434,0.00019258489,0.00068352727,0.00014860081,0.00030603437,0.00047489937],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009441813,0.000093171904,0.0004546363,0.000058904843,0.00004194875,0.00002734487,0.000091656555,0.00011452458,0.00012923512],"category_scores_gemma":[0.0020641533,0.000070707785,0.00037365904,0.00011913647,0.00013822003,0.00031309485,0.000014637164,0.00040014856,0.00004822818],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005460541,0.0029687248,0.7525056,0.0004332019,0.0015040825,0.0017225724,0.001185457,0.002230289,0.06537474,0.024111614,0.022260807,0.12024238],"study_design_scores_gemma":[0.02250344,0.0041259117,0.9122918,0.0015854917,0.0013225416,0.00034872262,0.00039023295,0.0008323289,0.0077811284,0.028386155,0.020112114,0.00032013402],"about_ca_topic_score_codex":0.00003939695,"about_ca_topic_score_gemma":0.000008787104,"teacher_disagreement_score":0.15978621,"about_ca_system_score_codex":0.000048273872,"about_ca_system_score_gemma":0.0005839329,"threshold_uncertainty_score":0.28833798},"labels":[],"label_agreement":null},{"id":"W4244341139","doi":"10.1172/jci10088","title":"Airway plumbing","year":2000,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Respiratory Support and Mechanisms","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Airway; Medicine; Biology; Surgery","score_opus":0.2677553386444419,"score_gpt":0.4770366443903058,"score_spread":0.2092813057458639,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4244341139","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00048760825,0.995959,0.000054770746,0.0001387415,0.0013261351,0.0003243497,0.0000024510837,0.000016457358,0.0016905054],"genre_scores_gemma":[0.000010274101,0.99253887,0.0021233803,0.00088539586,0.0032176953,0.0000035878625,0.00002407405,0.000044219018,0.0011525293],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9948184,0.00034515868,0.00393871,0.00020413574,0.0005206651,0.00017291677],"domain_scores_gemma":[0.9956724,0.00041482106,0.002821469,0.00027290755,0.00022177797,0.000596643],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002631896,0.00024540463,0.002954033,0.0002569411,0.000035393536,0.000028694327,0.00017248516,0.0006742261,0.00048481332],"category_scores_gemma":[0.0012837343,0.00016881112,0.0016794299,0.00023855954,0.000119278724,0.00016128736,0.000018074548,0.0014913785,0.00017189619],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022474727,0.00005518591,0.00008655136,0.002512831,0.00017477844,0.00016107016,0.000011337003,1.9287303e-7,9.894098e-7,0.000040472965,0.005172828,0.99176127],"study_design_scores_gemma":[0.00059930887,0.0008138427,0.000032084918,0.019218767,0.0021284604,0.00052741583,0.0000051333745,0.0000033904275,0.0000075133175,0.00043411745,0.9760934,0.00013655929],"about_ca_topic_score_codex":7.938939e-7,"about_ca_topic_score_gemma":3.1215126e-7,"teacher_disagreement_score":0.9916247,"about_ca_system_score_codex":0.000056466608,"about_ca_system_score_gemma":0.0022296417,"threshold_uncertainty_score":0.6883918},"labels":[],"label_agreement":null},{"id":"W4244724776","doi":"10.1172/jci0214817","title":"Parathyroid hormone is essential for normal fetal bone formation","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Bone health and treatments","field":"Medicine","cited_by":235,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital; McGill University; McGill University Health Centre","funders":"Medical Research Council","keywords":"Internal medicine; Endocrinology; Parathyroid hormone; Fetus; Anabolism; Cartilage; Ossification; Long bone; Medicine; Chemistry; Biology; Anatomy; Calcium; Pregnancy","score_opus":0.11568784558306382,"score_gpt":0.39960700421157735,"score_spread":0.2839191586285135,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4244724776","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9850874,0.0010211696,0.002215415,0.010611242,0.00035787694,0.00034352098,0.000007998112,0.000012889556,0.0003424775],"genre_scores_gemma":[0.9857551,0.0005659385,0.009213196,0.002942965,0.0008594584,0.000007550174,0.000024433186,0.000012404986,0.0006189434],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9977168,0.00006504746,0.0015959288,0.00010451148,0.00033760193,0.00018012556],"domain_scores_gemma":[0.99789673,0.00019894695,0.0009984208,0.00011106808,0.00035350263,0.00044133925],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008094456,0.000101672216,0.00043767292,0.00009357422,0.00008168234,0.000018892142,0.000041416995,0.00016644828,0.0000542731],"category_scores_gemma":[0.0007076282,0.0000788246,0.00029486624,0.0001097236,0.00008449821,0.0004574382,0.000007968834,0.00029252796,0.000056213226],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00866339,0.0043963436,0.069755666,0.000638465,0.00096366066,0.0003902013,0.0027098986,0.000042876873,0.02090184,0.00093875657,0.64082235,0.24977654],"study_design_scores_gemma":[0.07771011,0.025618317,0.69877565,0.00061952206,0.0026349567,0.0038889744,0.00021160014,0.075994655,0.023815785,0.0104495175,0.07957694,0.00070397666],"about_ca_topic_score_codex":0.00000588777,"about_ca_topic_score_gemma":0.0000026108366,"teacher_disagreement_score":0.62902,"about_ca_system_score_codex":0.000040000516,"about_ca_system_score_gemma":0.00010498521,"threshold_uncertainty_score":0.32143742},"labels":[],"label_agreement":null},{"id":"W4245234573","doi":"10.1172/jci200319159","title":"Autosomal dominant pseudohypoparathyroidism type Ib is associated with a heterozygous microdeletion that likely disrupts a putative imprinting control element of GNAS","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Genetic Syndromes and Imprinting","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital; McGill University","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"GNAS complex locus; Pseudohypoparathyroidism; Imprinting (psychology); Genomic imprinting; Genetics; Biology; Endocrinology; Internal medicine; Medicine; Gene; Parathyroid hormone","score_opus":0.038505553832486036,"score_gpt":0.3210772784450016,"score_spread":0.28257172461251556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4245234573","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929771,0.0003386095,0.006022773,0.00020492545,0.00022496496,0.00017637249,0.000005386968,0.0000026137964,0.00004726728],"genre_scores_gemma":[0.994885,0.00010353347,0.0044986773,0.00031870644,0.00010178805,0.0000028304066,0.000010091719,0.000017917966,0.000061439976],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977956,0.0003645683,0.001129331,0.0002236312,0.00027872974,0.0002081571],"domain_scores_gemma":[0.9972793,0.00011515055,0.0017842965,0.00015256034,0.0005243608,0.00014437501],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015526358,0.00016134938,0.00044804256,0.00004980002,0.000055747663,0.000026366593,0.00012049535,0.00017865226,0.000007944328],"category_scores_gemma":[0.0013727135,0.0001211571,0.00020447557,0.000110344154,0.00014717059,0.000014148645,0.00002783274,0.00022228115,0.000001892868],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019762747,0.00023390862,0.15691753,0.000022034763,0.00039138668,0.000010377396,0.00029921872,0.00033108713,0.8397293,0.00006293334,0.00028138954,0.0015232305],"study_design_scores_gemma":[0.0067719463,0.005451256,0.29405922,0.00026374348,0.0002917451,0.00027482235,0.0002724117,0.0011077859,0.68958044,0.0009025217,0.00068965583,0.00033447324],"about_ca_topic_score_codex":0.000006116515,"about_ca_topic_score_gemma":0.0000042573106,"teacher_disagreement_score":0.15014887,"about_ca_system_score_codex":0.00001999118,"about_ca_system_score_gemma":0.0002487411,"threshold_uncertainty_score":0.4940643},"labels":[],"label_agreement":null},{"id":"W4245476440","doi":"10.1172/jci200215595","title":"Glucagon-like peptide-1 receptor stimulation increases blood pressure and heart rate and activates autonomic regulatory neurons","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Sleep and Wakefulness Research","field":"Neuroscience","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto","funders":"National Institutes of Health","keywords":"Stimulation; Internal medicine; Endocrinology; Heart rate; Receptor; Blood pressure; Glucagon-like peptide-1; Glucagon; Medicine; Chemistry; Biology; Hormone; Diabetes mellitus","score_opus":0.11063628208817494,"score_gpt":0.35321322626305457,"score_spread":0.24257694417487963,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4245476440","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99726325,0.00040022715,0.000012652816,0.0018030951,0.00028834544,0.00015476478,0.0000055312466,0.0000208879,0.00005123107],"genre_scores_gemma":[0.997737,0.0004519388,0.00035552203,0.0008269579,0.00036410984,0.0000030501667,0.0000010220012,0.000016529782,0.00024389137],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9974439,0.0009014455,0.0008582997,0.0002921388,0.00032363166,0.00018056209],"domain_scores_gemma":[0.9961599,0.0026620566,0.00053452613,0.00016409469,0.00010970529,0.00036973075],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012935366,0.00013041901,0.00033111908,0.00013867217,0.00017000985,0.00012837608,0.00012858545,0.00013489439,0.00008311373],"category_scores_gemma":[0.006823116,0.000109335255,0.00008182949,0.00016186228,0.00049560453,0.00075952103,0.00006594274,0.000497752,0.000009951463],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046211568,0.0007035288,0.24021244,0.00010659764,0.00015785541,0.000029830277,0.00038430706,0.0013160773,0.72977686,0.00075396494,0.008921417,0.017175019],"study_design_scores_gemma":[0.0028397301,0.001051007,0.80898273,0.000182225,0.00029935414,0.00013532843,0.000032244792,0.02491185,0.15205646,0.0025193447,0.006725891,0.00026382093],"about_ca_topic_score_codex":0.00001167908,"about_ca_topic_score_gemma":0.0000012726044,"teacher_disagreement_score":0.5777204,"about_ca_system_score_codex":0.000007494434,"about_ca_system_score_gemma":0.000074818665,"threshold_uncertainty_score":0.81684},"labels":[],"label_agreement":null},{"id":"W4245825595","doi":"10.1172/jci200113397","title":"The multiple contributions of thyroid hormone to heat production","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Adipose Tissue and Metabolism","field":"Medicine","cited_by":66,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital","funders":"","keywords":"Thyroid; Hormone; Endocrinology; Internal medicine; Biology; Medicine","score_opus":0.0740917467028041,"score_gpt":0.39549065093451446,"score_spread":0.32139890423171036,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4245825595","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96345353,0.001731722,0.0009616806,0.032694615,0.00076945656,0.00025419917,0.0000020077748,0.000007832982,0.00012496162],"genre_scores_gemma":[0.9936262,0.001492716,0.0016800412,0.00067679124,0.0018792591,0.000002807583,0.0000037799184,0.0000073831734,0.00063102],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99811214,0.0001450269,0.0012165324,0.00009030856,0.00031649042,0.00011948115],"domain_scores_gemma":[0.99771637,0.0004599474,0.00044761473,0.00018452067,0.0009030851,0.00028845255],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0022270663,0.00006721083,0.00036227255,0.00006487202,0.00008630952,0.000008881716,0.00007544286,0.00008645459,0.0000058176875],"category_scores_gemma":[0.013475846,0.0000407274,0.00016500842,0.00025013325,0.00017261795,0.00012872132,0.000014379648,0.00031845295,0.0000145021995],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0039841942,0.00076315337,0.1330533,0.000030092147,0.00047761982,0.000044377266,0.00080027024,0.0003797952,0.7068142,0.0025421912,0.09014564,0.06096516],"study_design_scores_gemma":[0.0036977374,0.002379002,0.7289256,0.00019167965,0.00048465427,0.00037128216,0.00018255402,0.0002598514,0.062359184,0.0040278253,0.19701314,0.00010749663],"about_ca_topic_score_codex":0.0000142630715,"about_ca_topic_score_gemma":0.000007592145,"teacher_disagreement_score":0.644455,"about_ca_system_score_codex":0.000022413562,"about_ca_system_score_gemma":0.00020124197,"threshold_uncertainty_score":0.99483407},"labels":[],"label_agreement":null},{"id":"W4247220599","doi":"10.1172/jci200420373","title":"Development of antigen-specific ELISA for circulating autoantibodies to extracellular matrix protein 1 in lichen sclerosus","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Genital Health and Disease","field":"Medicine","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SKiN Health; University of New Brunswick","funders":"Menzies Centre for Australian Studies, King's College London, University of London; British Skin Foundation","keywords":"Lichen sclerosus; Autoantibody; Serology; Epitope; Immunology; Medicine; Pathology; Antigen; Antibody","score_opus":0.1774250684095468,"score_gpt":0.43692646583601846,"score_spread":0.25950139742647166,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4247220599","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935506,0.0010428561,0.0028903503,0.0015679772,0.00016166837,0.00075378094,0.0000021532674,0.000007648867,0.00002296693],"genre_scores_gemma":[0.80087066,0.0000123357,0.19868879,0.00014852762,0.00022668573,0.0000091045895,0.00000600264,0.000010327587,0.000027567305],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9970124,0.000052200194,0.0022520314,0.00014209382,0.0003494204,0.00019184903],"domain_scores_gemma":[0.9981251,0.000126017,0.0007512785,0.00011141432,0.0003801191,0.00050609105],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020414724,0.00009961794,0.00045427796,0.0001839221,0.000047573893,0.000011340995,0.000073206655,0.00011210345,0.000008054493],"category_scores_gemma":[0.0018823225,0.00008526723,0.00015327241,0.00020612737,0.00006309264,0.000111124245,0.000015845197,0.00022362701,0.000007449816],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0039292765,0.0018290798,0.41218325,0.0023903388,0.00010077739,0.0001417981,0.005740966,0.0021128873,0.50580907,0.003612493,0.00034763583,0.061802395],"study_design_scores_gemma":[0.0065374686,0.00092497596,0.9475463,0.0017067202,0.00003436024,0.000022691092,0.0004195624,0.00021634885,0.0354539,0.004883668,0.0020887738,0.00016522255],"about_ca_topic_score_codex":0.000004718759,"about_ca_topic_score_gemma":0.0000073206265,"teacher_disagreement_score":0.5353631,"about_ca_system_score_codex":0.00009067727,"about_ca_system_score_gemma":0.0012298757,"threshold_uncertainty_score":0.3477097},"labels":[],"label_agreement":null},{"id":"W4247285076","doi":"10.1172/jci0215336","title":"A translational rheostat for RFLAT-1 regulates RANTES expression in T lymphocytes","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institutes of Health; Elizabeth Glaser Pediatric AIDS Foundation","keywords":"Cell biology; Chemokine; Transcription factor; Biology; T cell; Proinflammatory cytokine; EIF4E; p38 mitogen-activated protein kinases; MAPK/ERK pathway; Effector; Kinase; Inflammation; Translation (biology); Immunology; Immune system; Messenger RNA; Gene; Genetics","score_opus":0.07463683282965859,"score_gpt":0.33247707445285823,"score_spread":0.25784024162319963,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4247285076","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9873446,0.002953643,0.002556007,0.0023669237,0.0042814137,0.00020272232,0.0000027474223,0.000016696347,0.000275239],"genre_scores_gemma":[0.994531,0.00037123714,0.001936133,0.00043830395,0.00019262066,0.0000061069936,0.000034445853,0.000010953813,0.0024792436],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980433,0.0002840506,0.0013610837,0.00012555555,0.000055292316,0.00013071712],"domain_scores_gemma":[0.9977774,0.0012105007,0.0006828956,0.00008164064,0.00021727163,0.000030269786],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010382289,0.00009734277,0.00031943968,0.00016554815,0.00007031773,0.000015496573,0.00009249054,0.00023846672,0.0007497999],"category_scores_gemma":[0.0013002455,0.000077701305,0.00023081717,0.000100986945,0.00013575166,0.0003878272,0.0000071583986,0.00031037614,0.00006092022],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025803281,0.00052514765,0.038392182,0.000050811137,0.00015615804,0.00000389967,0.0013180822,0.00041885735,0.8391668,0.0007202418,0.08071743,0.035950027],"study_design_scores_gemma":[0.02351845,0.0022087859,0.11111643,0.0010450846,0.00014252563,0.00027721433,0.0005508168,0.0067351484,0.62577,0.011315062,0.21684408,0.0004764039],"about_ca_topic_score_codex":0.0000033027125,"about_ca_topic_score_gemma":0.000002584227,"teacher_disagreement_score":0.21339685,"about_ca_system_score_codex":0.000026646716,"about_ca_system_score_gemma":0.00004924227,"threshold_uncertainty_score":0.8209783},"labels":[],"label_agreement":null},{"id":"W4248542691","doi":"10.1172/jci200523683","title":"Differential impact of prostaglandin H synthase 1 knockdown on platelets and parturition","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Inflammatory mediators and NSAID effects","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"National Institutes of Health; Queen's University; University of Pennsylvania","keywords":"ATP synthase; Platelet; Gene knockdown; Prostaglandin; Chemistry; Endocrinology; Medicine; Internal medicine; Cell biology; Biology; Biochemistry; Enzyme; Gene","score_opus":0.050830465635370456,"score_gpt":0.38516132413207393,"score_spread":0.33433085849670346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4248542691","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99869174,0.00006055339,0.00003897593,0.00071525,0.00025044548,0.0001699423,0.000005079531,0.0000063017433,0.000061703235],"genre_scores_gemma":[0.9977913,0.000097388176,0.00048766675,0.00016592715,0.0014157336,0.0000013715147,0.0000071565223,0.000009240881,0.000024202933],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983304,0.00014718134,0.0010181663,0.000097341006,0.00029817133,0.000108736094],"domain_scores_gemma":[0.99815065,0.0005273943,0.00073694374,0.0000936721,0.0001612257,0.0003301198],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00083352334,0.000103564686,0.00047974303,0.00011738302,0.000026114343,0.000010348763,0.0000324945,0.00015403952,0.00009024787],"category_scores_gemma":[0.0017857342,0.00006719087,0.00023051801,0.00006081461,0.00013869622,0.00013745378,0.000008324326,0.0003684085,0.000006000751],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008140648,0.0012034237,0.8263463,0.0003941183,0.00048125448,0.0001720021,0.0006005401,0.00014674263,0.07949433,0.00027409586,0.009050858,0.07369568],"study_design_scores_gemma":[0.0057610124,0.005798611,0.9375092,0.0008411912,0.0002008654,0.00017355505,0.00001010852,0.002127351,0.046662472,0.0005122702,0.00029773696,0.000105646344],"about_ca_topic_score_codex":0.0000033001136,"about_ca_topic_score_gemma":0.0000014079435,"teacher_disagreement_score":0.11116287,"about_ca_system_score_codex":0.0000385195,"about_ca_system_score_gemma":0.00017003962,"threshold_uncertainty_score":0.2739964},"labels":[],"label_agreement":null},{"id":"W4248953039","doi":"10.1172/jci0214596","title":"Defective fatty acid uptake modulates insulin responsiveness and metabolic responses to diet in CD36-null mice","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Metabolism and Genetic Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":233,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Canadian Institutes of Health Research; National Institutes of Health; American Heart Association","keywords":"Internal medicine; Endocrinology; CD36; Insulin resistance; Hyperinsulinemia; Insulin; Biology; Glucose uptake; Fructose; Triglyceride; Glycogen; Glycogen synthase; Fatty acid; Lipotoxicity; Medicine; Cholesterol; Biochemistry","score_opus":0.05133764479509177,"score_gpt":0.33714139656338066,"score_spread":0.28580375176828887,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4248953039","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9910718,0.006900687,0.000369217,0.0011457424,0.0002729475,0.00015269648,0.000008955876,0.0000028258914,0.00007511378],"genre_scores_gemma":[0.990269,0.0031000695,0.0049257856,0.0012954946,0.00028269173,0.000005733765,0.0000050188146,0.00001431434,0.00010190196],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99779356,0.00063316646,0.0009598162,0.000259978,0.00018569303,0.0001677687],"domain_scores_gemma":[0.9987609,0.00018749788,0.00038421422,0.00018219235,0.00023972623,0.00024547335],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001718984,0.00014091785,0.00038927802,0.00014751127,0.000040037383,0.000028935754,0.00015868316,0.00019489265,0.000016601214],"category_scores_gemma":[0.005272169,0.000122773,0.00012474229,0.00018804462,0.00015571229,0.000016671576,0.00006630035,0.00021483442,0.00000943385],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007603401,0.00047770355,0.35314137,0.000046149966,0.00025670906,0.000031554388,0.0012711922,0.00096283545,0.56163025,0.00032959474,0.0023123163,0.0719369],"study_design_scores_gemma":[0.001525452,0.0008722001,0.9266316,0.00004346165,0.00005082211,0.00001852759,0.00012265808,0.00016283346,0.056421876,0.0014746928,0.012510446,0.00016542146],"about_ca_topic_score_codex":0.000009371647,"about_ca_topic_score_gemma":0.000035925306,"teacher_disagreement_score":0.57349026,"about_ca_system_score_codex":0.0000030406038,"about_ca_system_score_gemma":0.0000834605,"threshold_uncertainty_score":0.631166},"labels":[],"label_agreement":null},{"id":"W4249074033","doi":"10.1172/jci200318589","title":"A homozygous mutation in HESX1 is associated with evolving hypopituitarism due to impaired repressor-corepressor interaction","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Growth Hormone and Insulin-like Growth Factors","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"Medical Research Council; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Fundação de Amparo à Pesquisa do Estado de São Paulo; Wellcome Trust","keywords":"Biology; Hypopituitarism; Haploinsufficiency; Genetics; Forebrain; Corepressor; Repressor; Endocrinology; Phenotype; Gene; Transcription factor","score_opus":0.06938387433390723,"score_gpt":0.3538282214987097,"score_spread":0.28444434716480244,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4249074033","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958666,0.000103858576,0.0006363244,0.0018464905,0.0005006976,0.00038648807,0.0000023437326,0.000027053495,0.00063016475],"genre_scores_gemma":[0.99452347,0.000024228948,0.0031095045,0.0019766088,0.00020369378,0.000009824254,0.000012543954,0.000029432425,0.000110676316],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9962838,0.0004505416,0.0020925463,0.00030666884,0.0006074921,0.00025893233],"domain_scores_gemma":[0.9963424,0.000757604,0.0013810649,0.00025623076,0.00080636994,0.00045628884],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0024184817,0.0001985665,0.00080529106,0.00040657516,0.0000618613,0.000051710696,0.000100229525,0.00028603792,0.000051866326],"category_scores_gemma":[0.0156083135,0.0001563447,0.00022091315,0.0006379575,0.0000929522,0.00068127265,0.000016499887,0.0009215301,0.000016727421],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003270917,0.0018777462,0.945161,0.00012005484,0.00084105035,0.0037100657,0.008332688,0.0009842779,0.008567126,0.00027070593,0.013055117,0.013809246],"study_design_scores_gemma":[0.00531395,0.003065674,0.97370434,0.0010016125,0.00029131304,0.0010720991,0.00044330076,0.0016044694,0.009845363,0.003072187,0.0003435737,0.00024213652],"about_ca_topic_score_codex":0.000076933204,"about_ca_topic_score_gemma":0.000035562072,"teacher_disagreement_score":0.028543316,"about_ca_system_score_codex":0.00021344694,"about_ca_system_score_gemma":0.0004101619,"threshold_uncertainty_score":0.99268365},"labels":[],"label_agreement":null},{"id":"W4249844052","doi":"10.1172/jci0215316","title":"Different mechanisms underlying the stimulation of KCa channels by nitric oxide and carbon monoxide","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Ion channel regulation and function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":93,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research; Heart and Stroke Foundation of Canada","keywords":"Nitric oxide; Chemistry; Biophysics; Stimulation; Protein subunit; Carbon monoxide; Pharmacology; Agonist; Biochemistry; Internal medicine; Medicine; Biology; Receptor; Gene","score_opus":0.09247713089352295,"score_gpt":0.3271748391372642,"score_spread":0.23469770824374125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4249844052","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98612905,0.0003560353,0.012285522,0.0007040381,0.00037093993,0.00009702395,0.0000012825365,0.0000029020507,0.00005319868],"genre_scores_gemma":[0.9986838,0.000290985,0.00034320413,0.00024914645,0.00019662862,0.0000016719925,0.000009914683,0.000008767067,0.00021588722],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99867,0.000185737,0.0007440963,0.00011537965,0.00020498988,0.00007980346],"domain_scores_gemma":[0.99880993,0.00011392257,0.0007047331,0.000103757,0.00017702368,0.00009060043],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006631477,0.0000880298,0.00018744844,0.00005171387,0.00004948613,0.00001712034,0.00007205946,0.00015136792,0.000009702626],"category_scores_gemma":[0.0005230896,0.000059879458,0.00009795377,0.00008122931,0.00009263909,0.000011617525,0.00002239395,0.00014318421,4.5155068e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001706871,0.00013945805,0.012273931,0.000029031864,0.00012143391,7.955486e-7,0.00011806239,0.0038957153,0.9715412,0.00049161346,0.0028373024,0.008380724],"study_design_scores_gemma":[0.005077997,0.0025724417,0.22307825,0.0001982124,0.00031039675,0.00007275939,0.00047502306,0.35147086,0.39214256,0.021671245,0.0024257957,0.0005044407],"about_ca_topic_score_codex":0.0000054937063,"about_ca_topic_score_gemma":8.782965e-7,"teacher_disagreement_score":0.5793987,"about_ca_system_score_codex":0.000009253467,"about_ca_system_score_gemma":0.000016257327,"threshold_uncertainty_score":0.24418135},"labels":[],"label_agreement":null},{"id":"W4250041627","doi":"10.1172/jci200318114","title":"The Fgl2/fibroleukin prothrombinase contributes to immunologically mediated thrombosis in experimental and human viral hepatitis","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Hepatitis C virus research","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; McMaster University; University Health Network; Hamilton Health Sciences; University of Toronto; Canada Research Chairs; St. Michael's Hospital","funders":"Canadian Institutes of Health Research; National Natural Science Foundation of China; Heart and Stroke Foundation of Canada","keywords":"Prothrombinase; Virology; Medicine; Thrombosis; Immunology; Viral hepatitis; Thrombin; Internal medicine","score_opus":0.0959930368233978,"score_gpt":0.4329421008410549,"score_spread":0.3369490640176571,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4250041627","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934685,0.0004807698,0.00003911142,0.004845107,0.00014624513,0.0005874483,0.0000019803283,0.000010005399,0.00042082646],"genre_scores_gemma":[0.99752593,0.00033084725,0.0009622054,0.0010178516,0.00007166517,0.000030284124,0.0000042378447,0.000013548225,0.00004340945],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99664485,0.0008710897,0.0015664251,0.00018302273,0.0004758231,0.0002587913],"domain_scores_gemma":[0.9977014,0.0010766843,0.00039524253,0.00017778724,0.0003173935,0.00033150677],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0036889093,0.00012643628,0.0005569794,0.00015063703,0.0001401003,0.00007303567,0.00013234143,0.00018498683,0.000047926183],"category_scores_gemma":[0.0126277525,0.0000820632,0.000113854716,0.0002861599,0.0005542344,0.0001745364,0.000048764956,0.00069458253,0.000015349047],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021526571,0.000277271,0.8830033,0.000011368965,0.0000893202,0.000049021193,0.00016849994,0.0000017135446,0.11049532,0.0035061035,0.00084223354,0.0013405834],"study_design_scores_gemma":[0.004113971,0.0035338071,0.9466699,0.00026151707,0.000029198514,0.000018587076,0.00015410938,0.000086910535,0.03736036,0.0043394635,0.003330066,0.00010212235],"about_ca_topic_score_codex":0.00012971679,"about_ca_topic_score_gemma":0.00009071886,"teacher_disagreement_score":0.07313496,"about_ca_system_score_codex":0.00013369921,"about_ca_system_score_gemma":0.00032687347,"threshold_uncertainty_score":0.99568933},"labels":[],"label_agreement":null},{"id":"W4251638612","doi":"10.1172/jci200317038","title":"Randall’s plaque of patients with nephrolithiasis begins in basement membranes of thin loops of Henle","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Kidney Stones and Urolithiasis Treatments","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"National Institutes of Health","keywords":"Basement membrane; Medicine; Anatomy; Calcium; Pathology; Internal medicine","score_opus":0.03936582350563315,"score_gpt":0.33095617237809266,"score_spread":0.2915903488724595,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4251638612","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99843246,0.0001444469,0.00007693223,0.00069137866,0.00015502432,0.0002743855,0.00001559072,0.0000022714664,0.00020751284],"genre_scores_gemma":[0.992938,0.00015696796,0.0064131543,0.0003814108,0.000047808637,0.0000021088008,0.000012440332,0.000012744959,0.000035399422],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99665284,0.00028710766,0.0021835242,0.00012917248,0.00062253646,0.00012481913],"domain_scores_gemma":[0.99651814,0.00038089094,0.0019611896,0.0001964467,0.00071073935,0.00023257104],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014425478,0.00013307872,0.0009380262,0.00019571184,0.000013540457,0.0000029087587,0.00007900438,0.00013684701,0.00004927],"category_scores_gemma":[0.0020347398,0.00008796149,0.00021856623,0.0002622555,0.0002336712,0.00014873185,0.000010802266,0.00025931827,6.0913925e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001779113,0.0014885372,0.994329,0.00025816282,0.0002550272,0.0000069048506,0.00045759088,0.00012687744,0.000230751,0.00026326478,0.000116897274,0.00068791123],"study_design_scores_gemma":[0.014847982,0.0025321862,0.9646273,0.0007408466,0.00038480802,0.000007834917,0.00017211455,0.00007761683,0.015341313,0.0006962422,0.00049898564,0.00007272301],"about_ca_topic_score_codex":0.000075830874,"about_ca_topic_score_gemma":0.000012293468,"teacher_disagreement_score":0.029701615,"about_ca_system_score_codex":0.000036638623,"about_ca_system_score_gemma":0.00051482685,"threshold_uncertainty_score":0.35869655},"labels":[],"label_agreement":null},{"id":"W4251764915","doi":"10.1172/jci200215506","title":"Deletion of phosphodiesterase 4D in mice shortens α2-adrenoceptor–mediated anesthesia, a behavioral correlate of emesis","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Phosphodiesterase function and regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Merck Canada Inc. (Canada)","funders":"National Institute of Child Health and Human Development","keywords":"Rolipram; Xylazine; Phosphodiesterase; Pentobarbital; Ketamine; Pharmacology; Chemistry; Barbiturate; Endocrinology; Internal medicine; Anesthesia; Medicine; Enzyme; Biochemistry","score_opus":0.05860576188850777,"score_gpt":0.32529729899747234,"score_spread":0.2666915371089646,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4251764915","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99833995,0.00051757344,0.000284474,0.0004234738,0.00029104928,0.000105944964,0.000004555068,0.0000031908924,0.000029769657],"genre_scores_gemma":[0.9979416,0.00035443547,0.0011467206,0.00025646007,0.00014065646,0.0000020377186,0.000043422544,0.000012266168,0.00010236534],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9976151,0.00022274659,0.0016441902,0.00015761425,0.00024330754,0.00011706739],"domain_scores_gemma":[0.997869,0.0001255988,0.0013252668,0.00014242006,0.00041444087,0.00012328496],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008236397,0.00012145727,0.00039414837,0.00011335563,0.000025602647,0.000009465061,0.00011043971,0.00027557308,0.00007124355],"category_scores_gemma":[0.0006503143,0.00010777332,0.00021569499,0.00018404792,0.00026004802,0.000025743864,0.000017443908,0.00020225174,0.0000025053516],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012123737,0.0013581784,0.5668013,0.000088743254,0.00014905834,0.000038560935,0.00073516514,0.0014527106,0.41163906,0.000060281593,0.005880305,0.010584253],"study_design_scores_gemma":[0.0059852144,0.0042567644,0.64089245,0.00049805595,0.0003025656,0.00020652227,0.0003266236,0.0065074954,0.3367572,0.00039385358,0.0034265455,0.00044669097],"about_ca_topic_score_codex":0.000027913984,"about_ca_topic_score_gemma":0.00003231209,"teacher_disagreement_score":0.07488185,"about_ca_system_score_codex":0.000017901175,"about_ca_system_score_gemma":0.00009770857,"threshold_uncertainty_score":0.43948683},"labels":[],"label_agreement":null},{"id":"W4251941545","doi":"10.1172/jci200422831","title":"Persistent improvement in synaptic and cognitive functions in an Alzheimer mouse model after rolipram treatment","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Alzheimer's disease research and treatments","field":"Medicine","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"School of Medicine, New York University; York University; University of Minnesota; National Institutes of Health; Alzheimer's Association","keywords":"Rolipram; Long-term potentiation; CREB; Synaptic plasticity; Neuroscience; Protein kinase A; Neurotransmission; Presenilin; Donepezil; Amyloid precursor protein; Phosphodiesterase; Pharmacology; Alzheimer's disease; Medicine; Chemistry; Biology; Internal medicine; Cell biology; Kinase; Biochemistry; Receptor; Dementia; Disease; Enzyme","score_opus":0.13273456056925528,"score_gpt":0.40745234143284087,"score_spread":0.27471778086358556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4251941545","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966502,0.00174555,0.00005034762,0.0010341317,0.000040218787,0.00043137846,0.000012283475,0.0000052899973,0.00003057858],"genre_scores_gemma":[0.998504,0.00017016786,0.0007609096,0.00038229604,0.00009492805,0.000041839958,0.000019669402,0.000012301882,0.000013886958],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983953,0.00010398212,0.00082135637,0.0001949408,0.00029445533,0.00018992616],"domain_scores_gemma":[0.99879575,0.00010797634,0.00021467655,0.0001029487,0.00018918047,0.0005894834],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044525156,0.00012975256,0.00037439476,0.00020389153,0.000027755364,0.000021622127,0.000028945262,0.00010171956,0.000013006099],"category_scores_gemma":[0.00020680188,0.00009445557,0.00016875971,0.00010893279,0.0001659072,0.0003061082,0.000014713206,0.00027605673,0.000007826387],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005228193,0.0063340734,0.9640802,0.000028953124,0.0069240527,0.00051474717,0.0009161654,0.0028319284,0.00037739443,0.000042639047,0.0000081151,0.012713539],"study_design_scores_gemma":[0.040921688,0.026446909,0.8960158,0.00080197846,0.0054225135,0.00009879239,0.001344342,0.023342958,0.0016144015,0.0036758222,0.000006976382,0.0003077977],"about_ca_topic_score_codex":0.00008726511,"about_ca_topic_score_gemma":0.00018484364,"teacher_disagreement_score":0.06806438,"about_ca_system_score_codex":0.00017959342,"about_ca_system_score_gemma":0.0006057991,"threshold_uncertainty_score":0.38517866},"labels":[],"label_agreement":null},{"id":"W4252720287","doi":"10.1172/jci200112877","title":"The chemokine KC, but not monocyte chemoattractant protein-1, triggers monocyte arrest on early atherosclerotic endothelium","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Chemokine receptors and signaling","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; University of British Columbia; Deutsche Forschungsgemeinschaft; American Heart Association","keywords":"Monocyte; Chemokine; Chemotaxis; CCL2; Immunology; Endothelium; CCR2; Cell biology; Chemokine receptor; Medicine; Chemistry; Biology; Inflammation; Receptor; Internal medicine","score_opus":0.09456878079758113,"score_gpt":0.35152690419764654,"score_spread":0.2569581234000654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4252720287","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9859406,0.00016255428,0.00018585597,0.011600971,0.00080185884,0.0005270704,0.000001864735,0.000031869662,0.0007473526],"genre_scores_gemma":[0.99183077,0.0006897085,0.0010162861,0.0014493099,0.0028946982,0.000011969312,0.0000035467292,0.000049205424,0.002054493],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9960626,0.00021058563,0.0022153836,0.00028249554,0.000866158,0.000362804],"domain_scores_gemma":[0.9959462,0.0010427269,0.0016410142,0.00037657816,0.00044223346,0.0005512093],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0030926354,0.00027193307,0.00079720374,0.000108147105,0.0001893806,0.00010270298,0.0002611447,0.00026194422,0.00005453619],"category_scores_gemma":[0.0033594458,0.0001683045,0.0005802601,0.00027714222,0.00032800017,0.00020962908,0.000029892872,0.001305515,0.00004202039],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.014572339,0.0014769101,0.072602265,0.00018295983,0.0009832339,0.00037760113,0.00063706835,0.0003341097,0.79249,0.0010082632,0.0034559693,0.11187929],"study_design_scores_gemma":[0.011151244,0.0038598466,0.11952947,0.0016380734,0.0004488289,0.0002805321,0.00016394889,0.0026111114,0.82946825,0.0020461096,0.028330272,0.00047231984],"about_ca_topic_score_codex":0.000020695417,"about_ca_topic_score_gemma":0.0000026288567,"teacher_disagreement_score":0.11140697,"about_ca_system_score_codex":0.00014372158,"about_ca_system_score_gemma":0.00038491315,"threshold_uncertainty_score":0.68632585},"labels":[],"label_agreement":null},{"id":"W4252795044","doi":"10.1172/jci0215595","title":"Glucagon-like peptide-1 receptor stimulation increases blood pressure and heart rate and activates autonomic regulatory neurons","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Regulation of Appetite and Obesity","field":"Neuroscience","cited_by":430,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto","funders":"National Institutes of Health","keywords":"Endocrinology; Internal medicine; Glucagon-like peptide-1; Adrenal medulla; Catecholamine; Receptor; Biology; Medicine; Diabetes mellitus; Type 2 diabetes","score_opus":0.06906751738822468,"score_gpt":0.31581175006090023,"score_spread":0.24674423267267553,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4252795044","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971495,0.00029502303,0.000014943655,0.0020304748,0.00027987786,0.00013696593,0.0000042219376,0.000025210793,0.00006376434],"genre_scores_gemma":[0.9966352,0.0005037899,0.00090528483,0.0012201696,0.00036691266,0.0000011257031,0.0000013750445,0.000013966057,0.00035216456],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.997818,0.0005983334,0.00092899887,0.00027704274,0.00024318024,0.00013446483],"domain_scores_gemma":[0.9971102,0.0015420957,0.0007999617,0.00015923675,0.00009390366,0.00029463472],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000990062,0.0001356765,0.00033285154,0.000108883534,0.0001632701,0.00010564849,0.000100439356,0.00013586995,0.000075134754],"category_scores_gemma":[0.0029020188,0.00011833107,0.00009113662,0.00012400711,0.0003902066,0.00085172174,0.00004760498,0.00032232763,0.000009954952],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023975187,0.00043581246,0.21380375,0.000071216564,0.000083155566,0.000010535824,0.00028366005,0.0021066968,0.77045673,0.0010512596,0.007093719,0.004363681],"study_design_scores_gemma":[0.0012952853,0.00048160204,0.88787174,0.00011048076,0.00018657056,0.000064695036,0.000011336016,0.011587297,0.0882367,0.0017989423,0.008198126,0.00015724819],"about_ca_topic_score_codex":0.0000074133645,"about_ca_topic_score_gemma":0.0000012902817,"teacher_disagreement_score":0.68222004,"about_ca_system_score_codex":0.0000066141833,"about_ca_system_score_gemma":0.000053830227,"threshold_uncertainty_score":0.48254007},"labels":[],"label_agreement":null},{"id":"W4253244719","doi":"10.1172/jci0214080","title":"The cardiac phenotype induced by PPARα overexpression mimics that caused by diabetes mellitus","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cardiovascular Function and Risk Factors","field":"Medicine","cited_by":765,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Heart, Lung, and Blood Institute; National Institutes of Health","keywords":"Peroxisome proliferator-activated receptor; Diabetic cardiomyopathy; Endocrinology; Internal medicine; Beta oxidation; Biology; Heart failure; Cardiomyopathy; Fatty acid metabolism; Glucose uptake; Fatty acid; Receptor; Insulin; Medicine; Metabolism; Biochemistry","score_opus":0.07587762791124153,"score_gpt":0.32346502885247663,"score_spread":0.2475874009412351,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4253244719","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98918027,0.004699633,0.00005683631,0.0038421263,0.001793221,0.00017126702,0.000007355807,0.000019990053,0.0002293336],"genre_scores_gemma":[0.9913638,0.0058973646,0.000101123645,0.0012225223,0.0008526462,0.0000024281287,0.000019751047,0.000023323973,0.00051699893],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9974589,0.00044615936,0.0010067497,0.00016364588,0.00072968355,0.00019491126],"domain_scores_gemma":[0.9974674,0.0008409599,0.0007340725,0.0002914516,0.00025870415,0.00040740508],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018004394,0.00014677247,0.0005747813,0.000045595036,0.00015070318,0.000055902136,0.000109729925,0.00026321603,0.000064649066],"category_scores_gemma":[0.0019088918,0.0000854524,0.0006797224,0.00015232165,0.00017904151,0.00018067693,0.000022052509,0.0007651227,0.000028084783],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017507125,0.00023473057,0.27522084,0.000036375284,0.0010063549,0.000004698725,0.00023831794,0.000011793571,0.08592237,0.00003823295,0.58548504,0.051626172],"study_design_scores_gemma":[0.005755557,0.001390006,0.2787486,0.0005792928,0.0012417263,0.000012324682,0.00027083416,0.0014161855,0.10036399,0.00064501155,0.6091578,0.00041868578],"about_ca_topic_score_codex":0.0000083066625,"about_ca_topic_score_gemma":6.362257e-7,"teacher_disagreement_score":0.051207487,"about_ca_system_score_codex":0.000056775818,"about_ca_system_score_gemma":0.000073021525,"threshold_uncertainty_score":0.34846476},"labels":[],"label_agreement":null},{"id":"W4253249668","doi":"10.1172/jci200524186","title":"Lack of MEF2A mutations in coronary artery disease","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cardiovascular, Neuropeptides, and Oxidative Stress Research","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Thrombosis and Atherosclerosis Research Institute","funders":"Joint Genome Institute; Canadian Institutes of Health Research; Lawrence Berkeley National Laboratory; University of Ottawa; Heart and Stroke Foundation of Canada; U.S. Department of Energy","keywords":"Proband; Coronary artery disease; Genetics; CAD; Genotyping; Coding region; Mutation; Biology; Medicine; Internal medicine; Genotype; Gene","score_opus":0.20520920108308602,"score_gpt":0.4549021402352849,"score_spread":0.2496929391521989,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4253249668","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99497515,0.00045450224,0.00013772331,0.0036217005,0.000116575815,0.00015373649,0.0000053923313,0.0000043876153,0.000530819],"genre_scores_gemma":[0.9965923,0.0004678329,0.0015353657,0.0005854986,0.0006130845,0.000001991354,0.000011955601,0.000010278303,0.00018173885],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997514,0.00037132777,0.0013201413,0.000119316894,0.00056093576,0.00011425419],"domain_scores_gemma":[0.9980522,0.000551006,0.00040459176,0.00017779032,0.00043857258,0.00037584652],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014983566,0.0000748031,0.00045995673,0.00019822127,0.000018247327,0.000009067605,0.000081544735,0.000059394868,0.000074127005],"category_scores_gemma":[0.0039374577,0.00006013023,0.00038397723,0.0002163936,0.00032235318,0.00023388249,0.00002247477,0.00046733953,0.000016167647],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012657315,0.000632508,0.93443924,0.0001421223,0.0002742412,0.00054667983,0.00026805716,0.0014718121,0.0033175112,0.00023079736,0.0024721208,0.054939155],"study_design_scores_gemma":[0.0025493521,0.0003497006,0.99162203,0.00031266324,0.00013104819,0.000076240474,0.000058844584,0.0008711458,0.0012104874,0.000869906,0.001896807,0.00005176618],"about_ca_topic_score_codex":0.000004032005,"about_ca_topic_score_gemma":0.000010067493,"teacher_disagreement_score":0.057182774,"about_ca_system_score_codex":0.000035683846,"about_ca_system_score_gemma":0.00044201897,"threshold_uncertainty_score":0.4713789},"labels":[],"label_agreement":null},{"id":"W4253388582","doi":"10.1172/jci200213971","title":"Enhanced ERK-1/2 activation in mice susceptible to coxsackievirus-induced myocarditis","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Viral Infections and Immunology Research","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Amgen (Canada); Hospital for Sick Children; Heart and Stroke Foundation; University of Toronto; University Health Network","funders":"Canadian Institutes of Health Research; University of Toronto; Heart and Stroke Foundation of Canada","keywords":"Myocarditis; Coxsackievirus; Virology; Enterovirus; Immunology; Medicine; Microbiology; Biology; Virus; Internal medicine","score_opus":0.1749567905483057,"score_gpt":0.43113673614328857,"score_spread":0.25617994559498286,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4253388582","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9887159,0.00005695321,0.00077953713,0.00806496,0.00041486238,0.00023511834,5.522629e-7,0.000011553581,0.001720573],"genre_scores_gemma":[0.99602866,0.00023660167,0.0011080536,0.0016898033,0.0005083076,0.0000064968917,0.0000027878466,0.000012147924,0.00040715968],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.997866,0.0002797553,0.001206469,0.00015318148,0.00030900544,0.00018563391],"domain_scores_gemma":[0.99840033,0.00034971352,0.00039075292,0.0001460727,0.00047568447,0.00023741894],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014706928,0.0000947508,0.00045831298,0.00035984808,0.000050565508,0.000023857065,0.00008774501,0.00020739199,0.0002487908],"category_scores_gemma":[0.0042142505,0.00008056184,0.00016867489,0.0006076229,0.000096025295,0.00035073824,0.000023240973,0.00085257523,0.00016420698],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039189262,0.00042778158,0.034045495,0.000027700782,0.000114908595,0.000018573179,0.00033245748,0.00006743127,0.89335346,0.00012814603,0.0075889076,0.06350322],"study_design_scores_gemma":[0.006104096,0.009432668,0.5824404,0.0009015726,0.000093621566,0.00008403182,0.00024841045,0.0012885615,0.39296442,0.0010269711,0.0051706154,0.00024466263],"about_ca_topic_score_codex":0.00003687521,"about_ca_topic_score_gemma":0.000011873609,"teacher_disagreement_score":0.54839486,"about_ca_system_score_codex":0.0001046551,"about_ca_system_score_gemma":0.00012772577,"threshold_uncertainty_score":0.5045156},"labels":[],"label_agreement":null},{"id":"W4254753682","doi":"10.1172/jci45819","title":"Phosducin influences sympathetic activity and prevents stress-induced hypertension in humans and mice","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cancer, Stress, Anesthesia, and Immune Response","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Sympathetic nervous system; Sympathetic activity; Medicine; Endocrinology; Internal medicine; Cell biology; Chemistry; Biology; Blood pressure; Heart rate","score_opus":0.06414447237831229,"score_gpt":0.3673238305480064,"score_spread":0.3031793581696941,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4254753682","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99748266,0.00033757775,0.0000016957032,0.001696015,0.00031662785,0.00013937756,8.646855e-7,0.0000051899124,0.000019984614],"genre_scores_gemma":[0.99821573,0.0007610283,0.00028417428,0.00030967657,0.00038432216,0.0000015830258,8.4118483e-7,0.000008629795,0.000034018696],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985622,0.0002137465,0.0007212797,0.00015941699,0.00023093136,0.000112411486],"domain_scores_gemma":[0.99850595,0.0005212238,0.0005134577,0.0001275964,0.00012558543,0.00020616093],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001327471,0.00010387187,0.00045292568,0.00012725283,0.000043569195,0.000025260877,0.00005601892,0.00017654304,0.000007241703],"category_scores_gemma":[0.0018978759,0.00007908014,0.00007687754,0.00009447288,0.00024777104,0.00026146194,0.00001985244,0.0007038349,9.914987e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006958809,0.00024040173,0.64934415,0.00007630226,0.00002862764,0.000044043645,0.00044948194,0.000002026885,0.31117916,0.000012320216,0.000041563275,0.03788606],"study_design_scores_gemma":[0.0019909472,0.0007529337,0.97727025,0.0005802541,0.00008851224,0.00020292916,0.00010246432,0.000217549,0.018105436,0.0004116829,0.000199851,0.0000772142],"about_ca_topic_score_codex":0.00012717413,"about_ca_topic_score_gemma":0.00011197141,"teacher_disagreement_score":0.3279261,"about_ca_system_score_codex":0.0000141417995,"about_ca_system_score_gemma":0.00022427017,"threshold_uncertainty_score":0.32247946},"labels":[],"label_agreement":null},{"id":"W4255060189","doi":"10.1172/jci200215316","title":"Different mechanisms underlying the stimulation of KCa channels by nitric oxide and carbon monoxide","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Ion channel regulation and function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research; Heart and Stroke Foundation of Canada","keywords":"Nitric oxide; Chemistry; Biophysics; Stimulation; Protein subunit; Carbon monoxide; Agonist; Pharmacology; Cell biology; Biochemistry; Internal medicine; Medicine; Biology; Receptor; Gene","score_opus":0.09247713089352295,"score_gpt":0.3271748391372642,"score_spread":0.23469770824374125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4255060189","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98612905,0.0003560353,0.012285522,0.0007040381,0.00037093993,0.00009702395,0.0000012825365,0.0000029020507,0.00005319868],"genre_scores_gemma":[0.9986838,0.000290985,0.00034320413,0.00024914645,0.00019662862,0.0000016719925,0.000009914683,0.000008767067,0.00021588722],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99867,0.000185737,0.0007440963,0.00011537965,0.00020498988,0.00007980346],"domain_scores_gemma":[0.99880993,0.00011392257,0.0007047331,0.000103757,0.00017702368,0.00009060043],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006631477,0.0000880298,0.00018744844,0.00005171387,0.00004948613,0.00001712034,0.00007205946,0.00015136792,0.000009702626],"category_scores_gemma":[0.0005230896,0.000059879458,0.00009795377,0.00008122931,0.00009263909,0.000011617525,0.00002239395,0.00014318421,4.5155068e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001706871,0.00013945805,0.012273931,0.000029031864,0.00012143391,7.955486e-7,0.00011806239,0.0038957153,0.9715412,0.00049161346,0.0028373024,0.008380724],"study_design_scores_gemma":[0.005077997,0.0025724417,0.22307825,0.0001982124,0.00031039675,0.00007275939,0.00047502306,0.35147086,0.39214256,0.021671245,0.0024257957,0.0005044407],"about_ca_topic_score_codex":0.0000054937063,"about_ca_topic_score_gemma":8.782965e-7,"teacher_disagreement_score":0.5793987,"about_ca_system_score_codex":0.000009253467,"about_ca_system_score_gemma":0.000016257327,"threshold_uncertainty_score":0.24418135},"labels":[],"label_agreement":null},{"id":"W4255156190","doi":"10.1172/jci200318237","title":"The fractalkine receptor CX3CR1 is a key mediator of atherogenesis","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Chemokine receptors and signaling","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Robarts Clinical Trials; Toronto General Hospital; University of Toronto","funders":"","keywords":"CX3CR1; Mediator; Key (lock); Receptor; Cell biology; Medicine; Chemistry; Biology; Chemokine receptor; Chemokine; Internal medicine","score_opus":0.06480258441889247,"score_gpt":0.3698281380249473,"score_spread":0.3050255536060548,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4255156190","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9922285,0.0009450481,0.00016255463,0.0055511617,0.00066905876,0.00010413991,0.00000186592,0.0000054269985,0.0003322443],"genre_scores_gemma":[0.99015653,0.0015291236,0.0059694503,0.000985213,0.001043139,0.0000016296925,0.0000022761026,0.000020354044,0.00029230458],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972344,0.0002264767,0.0017685529,0.00010894747,0.00053106266,0.00013056136],"domain_scores_gemma":[0.9963501,0.0012144758,0.0013651035,0.00018208672,0.00059517735,0.0002930553],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0031889998,0.00010491729,0.0005241214,0.00005595826,0.000059571677,0.000014466502,0.00010418064,0.00016215118,0.0002991295],"category_scores_gemma":[0.0073216856,0.000061771934,0.00040954378,0.0002182489,0.00021992777,0.000091314585,0.000011147034,0.00038591045,0.000012894217],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010612379,0.0007092749,0.7372357,0.00018584685,0.0009422414,0.000017296343,0.001421301,0.00001637646,0.15117644,0.0019144644,0.050412662,0.054907165],"study_design_scores_gemma":[0.004288368,0.0015349134,0.029109685,0.0005853668,0.00049090694,0.00010386472,0.0004497173,0.00022073678,0.71106625,0.0043530585,0.2475987,0.00019845333],"about_ca_topic_score_codex":0.000003541952,"about_ca_topic_score_gemma":9.616385e-7,"teacher_disagreement_score":0.708126,"about_ca_system_score_codex":0.000029662238,"about_ca_system_score_gemma":0.00041878532,"threshold_uncertainty_score":0.8765271},"labels":[],"label_agreement":null},{"id":"W4255918677","doi":"10.1172/jci200214036","title":"Targeted expression of a human pituitary tumor–derived isoform of FGF receptor-4 recapitulates pituitary tumorigenesis","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Fibroblast Growth Factor Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Ontario Institute for Cancer Research; University of Toronto; Mount Sinai Hospital","funders":"Medical Research Council; Medical Research Council Canada","keywords":"Biology; Gene isoform; Fibroblast growth factor receptor 4; Pituitary tumors; Carcinogenesis; Pituitary gland; Receptor; Cancer research; Fibroblast growth factor receptor; Cell biology; Fibroblast growth factor; Endocrinology; Cancer; Genetics; Gene; Hormone","score_opus":0.06421812979329598,"score_gpt":0.34586182030217427,"score_spread":0.2816436905088783,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4255918677","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983538,0.000776732,0.000089917135,0.00023093102,0.00025377973,0.00016303509,0.000016356356,0.000005873026,0.000109577224],"genre_scores_gemma":[0.9951416,0.00032677228,0.0038158647,0.0000917843,0.00046274776,0.0000031540487,0.00004746709,0.00002891987,0.0000816387],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9964196,0.0004336697,0.0021007988,0.00025897563,0.0005466838,0.00024024158],"domain_scores_gemma":[0.9968774,0.00018321842,0.0016444286,0.00035219602,0.0006661886,0.00027658773],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013641067,0.00018624862,0.00059638504,0.00016848985,0.000066564,0.000010652911,0.00039322505,0.00025737224,0.0002420783],"category_scores_gemma":[0.0019143634,0.00015730898,0.00038531373,0.00019881125,0.0004670482,0.000040447972,0.0001241036,0.00038181423,0.000006915918],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020893627,0.00021209511,0.03608841,0.000100811616,0.000075083306,0.000006193939,0.00011649025,0.00004920683,0.9578322,0.000011901607,0.004766177,0.00053245114],"study_design_scores_gemma":[0.0010168965,0.0023249458,0.069203794,0.0002818048,0.000032028383,0.000016049853,0.00008254726,0.00008194283,0.92593735,0.000555559,0.00032214174,0.00014491181],"about_ca_topic_score_codex":0.000021771923,"about_ca_topic_score_gemma":0.000004710565,"teacher_disagreement_score":0.03311538,"about_ca_system_score_codex":0.000020373907,"about_ca_system_score_gemma":0.00014017534,"threshold_uncertainty_score":0.6414874},"labels":[],"label_agreement":null},{"id":"W4256533826","doi":"10.1172/jci200112067","title":"Spontaneous air space enlargement in the lungs of mice lacking tissue inhibitor of metalloproteinases-3 (TIMP-3)","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Protease and Inhibitor Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":229,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Amgen (Canada); Montreal Children's Hospital; University of Toronto; Ontario Institute for Cancer Research","funders":"Canadian Institutes of Health Research; Amgen","keywords":"Matrix metalloproteinase; Lung; Extracellular matrix; Pathology; Fibrosis; Fibroblast; Tissue inhibitor of metalloproteinase; Biology; Immunology; Chemistry; Cell biology; In vitro; Medicine; Internal medicine; Biochemistry","score_opus":0.03458430447292604,"score_gpt":0.33319961969975165,"score_spread":0.2986153152268256,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4256533826","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967235,0.0005211158,0.0010875685,0.0010422294,0.00021989431,0.00022148798,0.0000030623876,0.0000014207973,0.00017976026],"genre_scores_gemma":[0.99550575,0.00021598874,0.0031940262,0.00047432753,0.000526371,0.0000036130837,0.000007799481,0.000009171895,0.000062946],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978966,0.00034213802,0.0011867877,0.0001343108,0.00031759174,0.00012257806],"domain_scores_gemma":[0.998347,0.00009585414,0.0010561544,0.00018988086,0.00023421503,0.00007692764],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023988413,0.00010341397,0.00031550386,0.00006304045,0.00002084658,0.0000068794934,0.0002249396,0.00015901112,0.000013866345],"category_scores_gemma":[0.0012617629,0.00007413956,0.00017610306,0.00013780342,0.00011111314,0.000015647029,0.0000453299,0.00022450619,0.0000014426822],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003038507,0.00019095291,0.0017734102,0.00003489314,0.000050605468,0.00011261913,0.00009977788,0.000076671684,0.99470204,0.0003303603,0.00061152887,0.0017132764],"study_design_scores_gemma":[0.0008353278,0.0016677523,0.001615341,0.0001550184,0.000050360995,0.00028963192,0.00012459054,0.000052142295,0.98782146,0.0019606184,0.005340332,0.00008745185],"about_ca_topic_score_codex":0.00002489872,"about_ca_topic_score_gemma":0.00002411438,"teacher_disagreement_score":0.006880621,"about_ca_system_score_codex":0.000011024782,"about_ca_system_score_gemma":0.00014705752,"threshold_uncertainty_score":0.30233237},"labels":[],"label_agreement":null},{"id":"W4280493604","doi":"10.1172/jci152635","title":"mTORC2 mediates structural plasticity in distal nociceptive endings that contributes to pain hypersensitivity following inflammation","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pain Mechanisms and Treatments","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Neurological Institute and Hospital; Université Laval; McGill University","funders":"Canadian Institutes of Health Research; Louise and Alan Edwards Foundation; Azrieli Foundation; Réseau québécois de recherche sur la douleur; Hebrew University of Jerusalem; Deutsche Forschungsgemeinschaft; International Development Research Centre; McGill University","keywords":"Nociceptor; Nociception; Hyperalgesia; Inflammation; Free nerve ending; Noxious stimulus; Neuroscience; Medicine; Immunology; Anatomy; Receptor; Biology; Internal medicine","score_opus":0.055680168993594556,"score_gpt":0.35464678822299833,"score_spread":0.29896661922940376,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4280493604","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944591,0.000022305743,0.0016761065,0.0028929382,0.0006268168,0.00027071833,0.000010768898,0.000011898282,0.000029334877],"genre_scores_gemma":[0.99647397,0.0000037570676,0.002285216,0.0009162785,0.00025592957,0.000008722146,0.000027637916,0.000010670738,0.00001780574],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9975038,0.00074833294,0.0008969324,0.00015895686,0.00052314164,0.00016884263],"domain_scores_gemma":[0.9972098,0.001774775,0.000600153,0.000066055494,0.00011632466,0.00023289223],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0038002278,0.00011941236,0.0005168,0.00019053003,0.000116584575,0.000022315882,0.00006314356,0.00007719432,0.000021342601],"category_scores_gemma":[0.007269155,0.00009898023,0.00022566877,0.00023731921,0.000052634798,0.00022004332,0.000051060746,0.000509945,0.0000024612084],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00089651276,0.00010997187,0.9611591,0.000022002765,0.00024103998,0.00044784608,0.0011502225,0.00047351292,0.026323749,0.0005303143,0.00018054321,0.00846518],"study_design_scores_gemma":[0.0046150116,0.0013603785,0.9698285,0.00020692674,0.00021214718,0.000047885598,0.0014456484,0.005805795,0.008923547,0.0072342404,0.00018491334,0.00013501181],"about_ca_topic_score_codex":0.000036290494,"about_ca_topic_score_gemma":0.000029670828,"teacher_disagreement_score":0.017400201,"about_ca_system_score_codex":0.00027842817,"about_ca_system_score_gemma":0.0001775652,"threshold_uncertainty_score":0.87023824},"labels":[],"label_agreement":null},{"id":"W4280608996","doi":"10.1172/jci148333","title":"HDAC6 modulates myofibril stiffness and diastolic function of the heart","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Histone Deacetylase Inhibitors Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Heart, Lung, and Blood Institute; National Institute on Aging; American Heart Association; Canadian Institutes of Health Research; Anschutz Medical Campus, University of Colorado; National Center for Advancing Translational Sciences; Italfarmaco; Small Business Innovation Research; Novo Nordisk; National Institutes of Health; Eikonizo Therapeutics; Novo Nordisk Fonden; Boettcher Foundation","keywords":"Titin; Myofibril; Sarcomere; HDAC6; Obscurin; Diastole; Internal medicine; Cardiomyopathy; Myofilament; Myocyte; Chemistry; Histone deacetylase; Cell biology; Heart failure; Medicine; Biology; Biochemistry; Histone","score_opus":0.04543004352491622,"score_gpt":0.34697587371279265,"score_spread":0.30154583018787645,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4280608996","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99774235,0.0003499677,0.000057998877,0.0012566014,0.00047311527,0.0000800133,0.0000051115417,0.0000013721188,0.0000334564],"genre_scores_gemma":[0.998988,0.000033138112,0.00013259971,0.0003013634,0.00036587083,0.0000028308264,0.000005325975,0.000008422478,0.00016248152],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99841124,0.0004422062,0.00062301767,0.00011341086,0.00032776812,0.00008238439],"domain_scores_gemma":[0.999039,0.000089644454,0.0004416966,0.00015899037,0.0001791326,0.00009154771],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012784229,0.000057655743,0.00017373524,0.000042068936,0.0001081829,0.000008698429,0.00012491884,0.00006681508,0.000014459421],"category_scores_gemma":[0.0010225154,0.000043429187,0.00013911574,0.00012528797,0.00025538748,0.00000777027,0.00014224437,0.00028338708,6.2784716e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003668513,0.00008403767,0.03054258,0.00002334963,0.00005752489,0.0000011670114,0.000073568146,0.0012872758,0.95226127,0.00007819321,0.009573959,0.0056502144],"study_design_scores_gemma":[0.0017951562,0.0016843501,0.68857944,0.000052904008,0.000070612325,0.00013793856,0.00017290858,0.0008214631,0.2579088,0.0018180152,0.04679692,0.00016147674],"about_ca_topic_score_codex":0.000009038857,"about_ca_topic_score_gemma":0.0000033537283,"teacher_disagreement_score":0.6943525,"about_ca_system_score_codex":0.000013772008,"about_ca_system_score_gemma":0.0002170675,"threshold_uncertainty_score":0.17709908},"labels":[],"label_agreement":null},{"id":"W4281692879","doi":"10.1172/jci156243","title":"α Cell dysfunction in islets from nondiabetic, glutamic acid decarboxylase autoantibody–positive individuals","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Diabetes and associated disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Nutrition, Metabolism and Diabetes","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Vanderbilt Diabetes Research and Training Center, Vanderbilt University Medical Center; University of Pennsylvania; National Institutes of Health; Vanderbilt University","keywords":"Autoantibody; Glutamate decarboxylase; Islet; Medicine; Cell; Internal medicine; Diabetes mellitus; Endocrinology; Immunology; Biology; Antibody; Biochemistry; Enzyme","score_opus":0.015621731584301628,"score_gpt":0.2915426766168644,"score_spread":0.27592094503256276,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4281692879","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973155,0.00078705,0.00013097402,0.0006770941,0.0006747592,0.00010673178,0.00005261864,0.0000040934974,0.0002511752],"genre_scores_gemma":[0.9971369,0.00015714382,0.00053288334,0.0015329884,0.00029312086,0.0000057037983,0.00025551234,0.000016586613,0.000069141846],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99775946,0.0005425109,0.00097266067,0.00022203867,0.0003203828,0.00018295021],"domain_scores_gemma":[0.9985794,0.00013042447,0.00091717223,0.00013372599,0.00010775276,0.00013151602],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014237425,0.000120978715,0.00029937734,0.000099585544,0.00007959766,0.000027769987,0.00019704424,0.0001598352,0.00006263834],"category_scores_gemma":[0.0006023063,0.00012161943,0.00020526153,0.00018406418,0.00008180498,0.00001734713,0.00010635333,0.00047854445,0.000005880301],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019962987,0.00066103647,0.5487914,0.00000996937,0.00020382571,0.000021169975,0.00026395867,0.002430928,0.43294173,0.000029584031,0.008640112,0.0058066035],"study_design_scores_gemma":[0.008522058,0.0034316212,0.70508796,0.00009175861,0.00024416714,0.000006958714,0.0008634824,0.001455135,0.2625167,0.006382305,0.010854418,0.00054341863],"about_ca_topic_score_codex":0.00002733635,"about_ca_topic_score_gemma":0.000008294287,"teacher_disagreement_score":0.17042504,"about_ca_system_score_codex":0.00004038718,"about_ca_system_score_gemma":0.00025498847,"threshold_uncertainty_score":0.49594966},"labels":[],"label_agreement":null},{"id":"W4282034534","doi":"10.1172/jci160852","title":"Purine nucleoside phosphorylase enables dual metabolic checkpoints that prevent T cell immunodeficiency and TLR7-associated autoimmunity","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Biochemical and Molecular Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pediatric Oncology Group","funders":"National Institute of Allergy and Infectious Diseases; Hirshberg Foundation for Pancreatic Cancer Research; National Cancer Institute; National Institutes of Health; Bristol-Myers Squibb; W. M. Keck Foundation","keywords":"Purine nucleoside phosphorylase; Autoimmunity; Biology; Immune system; TLR7; Cell biology; Immunology; Purine; Biochemistry; Innate immune system; Toll-like receptor; Enzyme","score_opus":0.04301281058107912,"score_gpt":0.32551379596429747,"score_spread":0.28250098538321833,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4282034534","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938504,0.0048714145,0.00006177868,0.00070176355,0.00020350139,0.00013640524,0.00001764939,0.0000056453323,0.00015141952],"genre_scores_gemma":[0.99729407,0.0011887843,0.00038827007,0.00042632764,0.00011005246,0.000008477903,0.00005854501,0.000018156656,0.00050732144],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976274,0.00063308777,0.00081319956,0.00022872284,0.0004688252,0.00022880691],"domain_scores_gemma":[0.99863815,0.00007590008,0.0006590706,0.00022429861,0.00018674598,0.00021584338],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002733964,0.00013808327,0.00032492992,0.00005815064,0.00020504913,0.00003639384,0.0002622754,0.00014527248,0.0000621062],"category_scores_gemma":[0.0011718746,0.00012165272,0.00023303031,0.00014396741,0.00026775038,0.00001363853,0.0004400118,0.000687902,0.000002097925],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023855652,0.00077373424,0.008767923,0.000023302271,0.00013008696,0.000023171353,0.00007885525,0.000058012807,0.98454857,0.00006819952,0.0017984962,0.0034910673],"study_design_scores_gemma":[0.0020172212,0.0012869021,0.047119107,0.00002441649,0.000094371215,0.00008470611,0.00015541688,0.00017132184,0.9301698,0.0014400681,0.017215045,0.00022158855],"about_ca_topic_score_codex":0.000038347,"about_ca_topic_score_gemma":0.000003459214,"teacher_disagreement_score":0.05437876,"about_ca_system_score_codex":0.000022490402,"about_ca_system_score_gemma":0.0002958153,"threshold_uncertainty_score":0.4960854},"labels":[],"label_agreement":null},{"id":"W4282821976","doi":"10.1172/jci155914","title":"Hematopoietic stem cell regeneration through paracrine regulation of the Wnt5a/Prox1 signaling axis","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Hematopoietic Stem Cell Transplantation","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Toronto; Hospital for Sick Children; Université Laval; National Heart, Lung, and Blood Institute; National Cancer Institute; Cincinnati Children's Hospital Medical Center","keywords":"Paracrine signalling; Cell biology; Stem cell; Wnt signaling pathway; Biology; Haematopoiesis; Stromal cell; Downregulation and upregulation; WNT5A; Regeneration (biology); Hematopoietic stem cell; Cancer research; Immunology; Signal transduction; Genetics; Gene","score_opus":0.08673644633285822,"score_gpt":0.34543711336943894,"score_spread":0.25870066703658073,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4282821976","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9894387,0.00022987141,0.0050755665,0.0035889628,0.0008431478,0.00040936517,0.00000529672,0.000013287332,0.00039581562],"genre_scores_gemma":[0.99317586,0.00004742589,0.00542791,0.0005721639,0.00034631742,0.000009544709,0.000018011706,0.00002162038,0.0003811273],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99550855,0.0007100447,0.0024151872,0.00018316218,0.0010478247,0.00013522372],"domain_scores_gemma":[0.9963661,0.0005677496,0.002228347,0.00030234436,0.0004187368,0.00011675012],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0028012642,0.00013128204,0.0005313565,0.00008524565,0.00016353502,0.000014199585,0.00017081012,0.00010695406,0.0001502366],"category_scores_gemma":[0.00023240913,0.00009690475,0.0003503034,0.0004271996,0.00014874592,0.0002192149,0.0000372533,0.00059112743,0.000004026322],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001550171,0.0011643603,0.17590414,0.0017665189,0.00034987315,0.000052812014,0.009156533,0.033498216,0.7609298,0.006764474,0.003972501,0.0048905765],"study_design_scores_gemma":[0.004886645,0.0016568707,0.07240639,0.0007655969,0.0009411925,0.0007087326,0.0013072351,0.006131165,0.89604807,0.013588682,0.0013223079,0.00023709303],"about_ca_topic_score_codex":0.000009545173,"about_ca_topic_score_gemma":0.0000013178937,"teacher_disagreement_score":0.13511828,"about_ca_system_score_codex":0.00008746822,"about_ca_system_score_gemma":0.0004363956,"threshold_uncertainty_score":0.3951661},"labels":[],"label_agreement":null},{"id":"W4282836213","doi":"10.1172/jci157086","title":"Disrupting the DREAM complex enables proliferation of adult human pancreatic β cells","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Nutrition, Metabolism and Diabetes","funders":"National Institute of General Medical Sciences; National Institute of Diabetes and Digestive and Kidney Diseases; National Cancer Institute; National Institutes of Health","keywords":"DYRK1A; Cell biology; Biology; Kinase; Cell growth; Biochemistry","score_opus":0.10252609596712822,"score_gpt":0.376283097642585,"score_spread":0.2737570016754568,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4282836213","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953268,0.000050332706,0.00014133251,0.003029014,0.0002997522,0.00021771145,0.0000038960475,0.00001017087,0.00092096475],"genre_scores_gemma":[0.99534464,0.000020443586,0.0016519005,0.0021231403,0.00058098364,0.000008563016,0.000020283689,0.000008530457,0.00024149807],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99724597,0.0004733487,0.0015399569,0.00009895737,0.0005365503,0.00010523281],"domain_scores_gemma":[0.997028,0.0008308953,0.0014108403,0.00016742107,0.00042625514,0.00013662262],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020945657,0.00008430737,0.00046266027,0.00008318735,0.00020671773,0.00001672121,0.0001011306,0.00004626706,0.00023060745],"category_scores_gemma":[0.0024118146,0.00005444119,0.00021083535,0.00020100093,0.00019168992,0.00010357906,0.00003372623,0.00042788198,0.0000031245002],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00062527426,0.0007744171,0.66663766,0.0002896611,0.0003820653,0.000016229316,0.0014381901,0.0012164454,0.30031362,0.0055579804,0.018493438,0.004255003],"study_design_scores_gemma":[0.011589167,0.0093677305,0.8107225,0.00079920655,0.0020087422,0.0002677983,0.0053416053,0.024904884,0.10650232,0.018215166,0.009892929,0.00038797682],"about_ca_topic_score_codex":0.000016961361,"about_ca_topic_score_gemma":0.0000015252054,"teacher_disagreement_score":0.19381131,"about_ca_system_score_codex":0.00003970738,"about_ca_system_score_gemma":0.00021147117,"threshold_uncertainty_score":0.28873417},"labels":[],"label_agreement":null},{"id":"W4282946071","doi":"10.1172/jci154317","title":"The neuronal tyrosine kinase receptor ligand ALKAL2 mediates persistent pain","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pain Mechanisms and Treatments","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotchkiss Brain Institute; University of Calgary; Alberta Children's Hospital","funders":"Alberta Children's Hospital Research Institute; Canada Research Chairs; Crohn's and Colitis Canada; Canadian Institutes of Health Research; Agence de la Biomédecine; University of Calgary","keywords":"Receptor tyrosine kinase; Tyrosine kinase; ROR1; Tropomyosin receptor kinase C; Receptor; Receptor Protein-Tyrosine Kinases; Ligand (biochemistry); Medicine; Chemistry; Cell biology; Biology; Internal medicine; Platelet-derived growth factor receptor","score_opus":0.07057905906645386,"score_gpt":0.3428778714697414,"score_spread":0.27229881240328757,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4282946071","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9637856,0.0007732217,0.000053455333,0.034034573,0.001119381,0.00015551323,0.0000054278335,0.000009567191,0.00006330081],"genre_scores_gemma":[0.9919686,0.0003492003,0.0016399836,0.004619846,0.00080076983,0.000010082419,0.00002044999,0.000015012044,0.0005760736],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9973771,0.00078485295,0.00095407217,0.00012268037,0.0006199082,0.00014136799],"domain_scores_gemma":[0.9972921,0.0013794822,0.00070694723,0.00014387448,0.0001809612,0.00029664254],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.006162359,0.00009442779,0.00029563918,0.0000509388,0.00029524017,0.000025398573,0.00012063526,0.000049432503,0.00009718715],"category_scores_gemma":[0.003968594,0.000057938036,0.00034894815,0.00013698296,0.00012771609,0.00006860175,0.00004566443,0.0005515276,0.0000087889775],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0059466274,0.0037660063,0.5172956,0.00014004316,0.0023504598,0.00070260064,0.0015841348,0.0007207555,0.05722045,0.004946013,0.21239631,0.19293101],"study_design_scores_gemma":[0.028231215,0.044628497,0.42723408,0.00068963383,0.0026314699,0.00085578725,0.004143345,0.017632892,0.019199776,0.041178703,0.41276127,0.0008133217],"about_ca_topic_score_codex":0.0000043493774,"about_ca_topic_score_gemma":0.0000013168313,"teacher_disagreement_score":0.20036498,"about_ca_system_score_codex":0.00007173715,"about_ca_system_score_gemma":0.00027684213,"threshold_uncertainty_score":0.47510648},"labels":[],"label_agreement":null},{"id":"W4283715614","doi":"10.1172/jci151666","title":"Reversal of viral and epigenetic HLA class I repression in Merkel cell carcinoma","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Polyomavirus and related diseases","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"National Institute of General Medical Sciences; National Cancer Institute; National Institutes of Health; Provincial Health Services Authority; Maze Therapeutics; BeiGene; Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology; National Human Genome Research Institute; Agios Pharmaceuticals; Foghorn Therapeutics; Parker Institute for Cancer Immunotherapy; Leukemia and Lymphoma Society; G. Harold and Leila Y. Mathers Foundation; BC Children’s Hospital Foundation; BC Children's Hospital; Howard Hughes Medical Institute; Biogen; Dana-Farber/Harvard Cancer Center; Children's Hospital Foundation; Conquer Cancer Foundation; National Heart, Lung, and Blood Institute; Pfizer; Cancer Research Institute","keywords":"Psychological repression; Merkel cell carcinoma; Epigenetics; Human leukocyte antigen; Biology; Carcinoma; Cancer research; Merkel cell; Virology; Immunology; Genetics; Antigen; Gene","score_opus":0.052087356600831226,"score_gpt":0.35607881277838294,"score_spread":0.3039914561775517,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283715614","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99598247,0.002172283,0.000008272125,0.0011295286,0.00028328437,0.000095230615,0.000004173375,0.0000026889052,0.00032206954],"genre_scores_gemma":[0.9985471,0.00025095916,0.00048124927,0.000413722,0.00013673233,0.0000013773849,0.0000039459032,0.000007732478,0.00015717697],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99798113,0.00032206022,0.0011616792,0.000115654235,0.0003305162,0.00008898769],"domain_scores_gemma":[0.9985713,0.0002499493,0.00076650426,0.000113827504,0.00007515043,0.00022332069],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011136453,0.000065794666,0.00036399605,0.00012955906,0.000037777383,0.000003770885,0.00006188529,0.000089287954,0.0000497856],"category_scores_gemma":[0.00065968983,0.00005129438,0.0001368617,0.00013311619,0.00015007936,0.000069012174,0.000054697593,0.00054937275,7.285674e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00081361376,0.00042703518,0.9679665,0.000089659334,0.000029041836,0.00012835767,0.00027049883,0.00038573795,0.02430691,0.00005563755,0.0019318509,0.0035951699],"study_design_scores_gemma":[0.0039048046,0.0015979066,0.9838283,0.0001620459,0.00020877556,0.00006859029,0.0002005554,0.0017535919,0.006084516,0.0013994044,0.00072326907,0.000068213514],"about_ca_topic_score_codex":0.00003686363,"about_ca_topic_score_gemma":0.0000011292223,"teacher_disagreement_score":0.018222395,"about_ca_system_score_codex":0.00003018751,"about_ca_system_score_gemma":0.00030703528,"threshold_uncertainty_score":0.23867817},"labels":[],"label_agreement":null},{"id":"W4283726838","doi":"10.1172/jci161070","title":"TGF-β1–induced endothelial-mesenchymal transition: a potential contributor to fibrotic remodeling in atrial fibrillation?","year":2022,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Cardiac Fibrosis and Remodeling","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Heart Institute","funders":"National Heart, Lung, and Blood Institute; National Institutes of Health; Deutsche Forschungsgemeinschaft; European Commission","keywords":"Atrial fibrillation; Fibrosis; Cardiac fibrosis; Epithelial–mesenchymal transition; Mesenchymal stem cell; Transforming growth factor; Medicine; Myofibroblast; Cardiology; Internal medicine; Function (biology); Heart failure; Transition (genetics); Regulator; Pathology; Biology; Cell biology","score_opus":0.07343482893537602,"score_gpt":0.3604289174561574,"score_spread":0.2869940885207814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283726838","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5199088,0.00036179202,0.0011557309,0.47210348,0.0052945404,0.0009973999,0.00008405655,0.000029767007,0.00006444969],"genre_scores_gemma":[0.5754729,0.0003946365,0.009859943,0.2812219,0.13185368,0.000009951686,0.00065986614,0.00019839179,0.00032871848],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9919979,0.00096344895,0.004392289,0.0005340124,0.0016634021,0.00044894664],"domain_scores_gemma":[0.9957599,0.00094889716,0.0017452249,0.0003750168,0.00074718514,0.00042376705],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.003824685,0.0003908688,0.0020917952,0.00070143386,0.000134794,0.00009653166,0.00020594642,0.0011634253,0.00022357152],"category_scores_gemma":[0.0028773907,0.00034803487,0.0023119769,0.00048875686,0.00008572009,0.00025383764,0.00006665771,0.0043300865,0.00001732385],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.016767418,0.00020460117,0.0057917107,0.0014481506,0.00211463,0.0031803849,0.0024339096,0.43552294,0.0322543,0.000046596855,0.47962314,0.020612212],"study_design_scores_gemma":[0.053219073,0.017102154,0.021265214,0.01197035,0.0075992267,0.005843106,0.0006284285,0.2222107,0.001082541,0.0059791584,0.6497928,0.0033072478],"about_ca_topic_score_codex":0.000060663806,"about_ca_topic_score_gemma":0.0000029745258,"teacher_disagreement_score":0.21331224,"about_ca_system_score_codex":0.0003705522,"about_ca_system_score_gemma":0.0015912153,"threshold_uncertainty_score":0.9998972},"labels":[],"label_agreement":null},{"id":"W4285385793","doi":"10.1172/jci161979","title":"Genetic mechanism for the loss of PRAME in B cell lymphomas. Reply.","year":2022,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Spinal Cord Injury BC","funders":"","keywords":"Mechanism (biology); Biology; Cancer research; Lymphoma; Computational biology; Genetics; Immunology; Epistemology; Philosophy","score_opus":0.07895625948709005,"score_gpt":0.35606782101422313,"score_spread":0.27711156152713307,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285385793","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.22904432,0.0013247973,0.00012827937,0.7661876,0.0019063896,0.0011853358,0.000040686038,0.000007596178,0.00017496319],"genre_scores_gemma":[0.13512999,0.0023454833,0.007901282,0.8474922,0.005919925,0.00014926212,0.00008728944,0.00007556762,0.000898998],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9960082,0.00031688254,0.0025373688,0.00023728165,0.00071060687,0.00018966648],"domain_scores_gemma":[0.99286115,0.0033955413,0.00286635,0.00039229405,0.00039009834,0.0000945435],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001663461,0.00019874929,0.0009931647,0.00016976669,0.00004682287,0.00001732825,0.00023471887,0.00041551972,0.00011273071],"category_scores_gemma":[0.0018957952,0.00012383047,0.0007096512,0.00016838385,0.00016793942,0.000052039006,0.00004815641,0.0009937352,0.0000030716367],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00059562834,0.00080595823,0.06854069,0.00064830895,0.00058531796,0.0012415387,0.0002079245,0.00007502973,0.00006150351,0.00038680478,0.92263204,0.0042192717],"study_design_scores_gemma":[0.01891877,0.008739047,0.13166116,0.0012594104,0.003495879,0.00072861154,0.00011138499,0.0009301206,0.003075727,0.031580374,0.7991186,0.00038094478],"about_ca_topic_score_codex":0.000062089675,"about_ca_topic_score_gemma":0.0000037007508,"teacher_disagreement_score":0.12351345,"about_ca_system_score_codex":0.00023002308,"about_ca_system_score_gemma":0.0010726933,"threshold_uncertainty_score":0.50496596},"labels":[],"label_agreement":null},{"id":"W4285388603","doi":"10.1172/jci159876","title":"Frequent detection but lack of infectivity of SARS-CoV-2 RNA in presymptomatic, infected blood donor plasma","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; National Heart, Lung, and Blood Institute; Centers for Disease Control and Prevention; National Institutes of Health; Grifols; U.S. Department of Health and Human Services","keywords":"Viremia; Infectivity; Medicine; Population; Virology; Virus; Immunology; Whole blood","score_opus":0.1603804722911355,"score_gpt":0.4321814778785529,"score_spread":0.2718010055874174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285388603","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99853665,0.00006248246,0.0001645211,0.0002740964,0.00031705582,0.00039180677,0.0000069964276,0.000015030663,0.00023135974],"genre_scores_gemma":[0.9973694,0.000011976335,0.0004019522,0.0019914529,0.00018641217,0.000015866972,0.0000017511594,0.00001782667,0.0000033383708],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99543035,0.0008935493,0.0023480835,0.00019439629,0.0009366096,0.00019701262],"domain_scores_gemma":[0.9959973,0.0013509808,0.001766485,0.00026174443,0.0005542561,0.00006922212],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003997678,0.00014140936,0.00083265756,0.0005274442,0.000048689188,0.000011966891,0.00017774603,0.00017434462,0.000012386248],"category_scores_gemma":[0.0073622153,0.00012555542,0.00032960955,0.00073370413,0.00027396722,0.00023945022,0.00010610609,0.001168156,0.000002953677],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006564321,0.00086904364,0.41605327,0.00017977804,0.00014346477,0.000027829401,0.00020242337,0.000044701068,0.5781879,0.000033807864,0.000038753416,0.0035626139],"study_design_scores_gemma":[0.004747189,0.0030825045,0.22265653,0.0001992478,0.00016156222,0.000090648246,0.000059173177,0.003038783,0.7639641,0.0016286505,0.00028698557,0.00008458219],"about_ca_topic_score_codex":0.0004109008,"about_ca_topic_score_gemma":0.0001642144,"teacher_disagreement_score":0.19339673,"about_ca_system_score_codex":0.00014692669,"about_ca_system_score_gemma":0.000883026,"threshold_uncertainty_score":0.8813791},"labels":[],"label_agreement":null},{"id":"W4288434347","doi":"10.1172/jci154571","title":"Small-molecule eRF3a degraders rescue CFTR nonsense mutations by promoting premature termination codon readthrough","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cystic Fibrosis Research Advances","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Center for Advancing Translational Sciences; National Institute of General Medical Sciences; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; McGill University; Georgetown University; National Institutes of Health; Cystic Fibrosis Foundation","keywords":"Cystic fibrosis; ΔF508; Nonsense mutation; Cell biology; Cell culture; Mutation; Biology; Telomerase reverse transcriptase; Cystic fibrosis transmembrane conductance regulator; Cancer research; Molecular biology; Chemistry; Genetics; Gene; Telomerase; Missense mutation","score_opus":0.09750121278110492,"score_gpt":0.41086115391218375,"score_spread":0.31335994113107885,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4288434347","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98044586,0.00042615732,0.0011390579,0.016806815,0.00039364304,0.0005378326,0.000024271692,0.0000320054,0.00019435931],"genre_scores_gemma":[0.97186685,0.000056584493,0.025993159,0.0009974305,0.00039355134,0.000026953292,0.00014089856,0.000034074223,0.00049049425],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9956397,0.001088912,0.0017213975,0.00025656624,0.0010463891,0.00024705028],"domain_scores_gemma":[0.9962466,0.0014079124,0.0011353202,0.00022816868,0.0005785363,0.00040348838],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.004211635,0.00014482051,0.00047759846,0.00019010626,0.00026185007,0.000050374547,0.00017587384,0.00012183985,0.000076458426],"category_scores_gemma":[0.017163202,0.00012724019,0.00024196116,0.0004916424,0.00030477578,0.00028828948,0.00007088774,0.0014669975,0.0000058971905],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00412054,0.002756887,0.05748472,0.0010530405,0.0006973723,0.0009590051,0.0063923164,0.002011203,0.7596444,0.00067977497,0.10161838,0.06258239],"study_design_scores_gemma":[0.036337856,0.03760777,0.32279676,0.0055770655,0.0026813494,0.009012457,0.01348572,0.12702394,0.33514267,0.03014357,0.07799218,0.0021986682],"about_ca_topic_score_codex":0.000019796033,"about_ca_topic_score_gemma":0.000012709683,"teacher_disagreement_score":0.42450172,"about_ca_system_score_codex":0.00019109095,"about_ca_system_score_gemma":0.0006821142,"threshold_uncertainty_score":0.9911156},"labels":[],"label_agreement":null},{"id":"W4288447650","doi":"10.1172/jci161908","title":"SPTLC1 variants associated with ALS produce distinct sphingolipid signatures through impaired interaction with ORMDL proteins","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Lysosomal Storage Disorders Research","field":"Medicine","cited_by":61,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"National Institute of Neurological Disorders and Stroke; Canadian Institutes of Health Research; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Stiftung für die Erforschung der Muskelkrankheiten; National Science Foundation","keywords":"Sphingolipid; Biology; Serine; Phenotype; HEK 293 cells; Transmembrane protein; Protein subunit; Cell biology; Genetics; Molecular biology; Gene; Phosphorylation; Receptor","score_opus":0.09747993868324506,"score_gpt":0.39382650525099827,"score_spread":0.2963465665677532,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4288447650","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9913213,0.000090267626,0.0004724655,0.0065267617,0.00030564473,0.0008494102,0.000008633067,0.00003859033,0.0003869033],"genre_scores_gemma":[0.99605036,0.000012460237,0.0020796023,0.0008412419,0.0005910721,0.00003608028,0.0000538405,0.000040886956,0.00029445172],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9958521,0.0007934981,0.0012264206,0.00031378306,0.0015319373,0.00028226222],"domain_scores_gemma":[0.996261,0.0005904872,0.0017258067,0.00026042177,0.0008680511,0.0002942421],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029033907,0.00019122692,0.0006600307,0.00014104898,0.00024746527,0.00005819059,0.00021428108,0.00012120678,0.00019651126],"category_scores_gemma":[0.008132653,0.0001257228,0.00016490396,0.00071953493,0.00025609313,0.00059038756,0.0000777873,0.0018856352,0.0000045744305],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.030640911,0.0068640593,0.8991266,0.0004025869,0.00307526,0.002032369,0.00526311,0.0037950273,0.020511048,0.00031868476,0.017355712,0.010614613],"study_design_scores_gemma":[0.010781474,0.018479189,0.95753527,0.0009971918,0.0004991169,0.0007863155,0.00084712455,0.0021402691,0.0028792652,0.0022262833,0.0024603475,0.0003681455],"about_ca_topic_score_codex":0.000086692904,"about_ca_topic_score_gemma":0.0000597972,"teacher_disagreement_score":0.05840866,"about_ca_system_score_codex":0.0003104576,"about_ca_system_score_gemma":0.0011254174,"threshold_uncertainty_score":0.97361326},"labels":[],"label_agreement":null},{"id":"W4292065316","doi":"10.1172/jci159283","title":"HDACi promotes inflammatory remodeling of the tumor microenvironment to enhance epitope spreading and antitumor immunity","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Histone Deacetylase Inhibitors Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Discovery Centre; McMaster University Medical Centre","funders":"Canadian Institutes of Health Research; Government of Ontario; Terry Fox Research Institute; Canadian Cancer Society; Ontario Institute for Cancer Research","keywords":"Epitope; Immunity; Tumor microenvironment; Inflammation; Cancer research; Immunology; Immune system; Cell biology; Biology; Chemistry; Antigen","score_opus":0.0292737729577458,"score_gpt":0.34655608990629405,"score_spread":0.31728231694854825,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4292065316","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983689,0.0002841748,0.0001550778,0.0008255665,0.00018144143,0.00016017894,0.0000049781065,0.0000011940423,0.00001846138],"genre_scores_gemma":[0.997713,0.00006548784,0.0016744953,0.00026373327,0.00018981297,0.000004382573,0.0000025038394,0.000009808552,0.00007674309],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981492,0.0004960826,0.0008055788,0.00013655948,0.0003057939,0.000106785534],"domain_scores_gemma":[0.99892455,0.000074442934,0.0005622403,0.00022237303,0.000100074634,0.00011628962],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002366965,0.00007064043,0.00018606414,0.000044048298,0.00014309757,0.00001017597,0.00023952484,0.00003874267,0.000008187339],"category_scores_gemma":[0.0016508403,0.000056956847,0.0001060738,0.00008524611,0.00020389135,0.000008979808,0.00032793652,0.00040066073,9.1612606e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008994995,0.000046700174,0.012095029,0.000019829222,0.000017113358,0.0000026633286,0.00012502502,0.0009005556,0.98498,0.000007093917,0.00041113948,0.0013049059],"study_design_scores_gemma":[0.00024933362,0.0005330518,0.016590014,0.00007682938,0.000014261236,0.000052026837,0.00010080131,0.0003000869,0.97814476,0.00013545057,0.0037301327,0.000073244686],"about_ca_topic_score_codex":0.000008579307,"about_ca_topic_score_gemma":0.0000036595065,"teacher_disagreement_score":0.006835229,"about_ca_system_score_codex":0.00003347274,"about_ca_system_score_gemma":0.0002015976,"threshold_uncertainty_score":0.23226328},"labels":[],"label_agreement":null},{"id":"W4293582093","doi":"10.1172/jci157074","title":"Predicting cognitive decline in Parkinson’s disease using FDG-PET–based supervised learning","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Dementia and Cognitive Impairment Research","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Health Sciences Centre","funders":"Natural Sciences and Engineering Research Council of Canada; Max Rady College of Medicine, University of Manitoba; University of Manitoba; Manitoba Medical Service Foundation","keywords":"Parkinson's disease; Cognitive decline; Disease; Cognition; Medicine; Positron emission tomography; Psychology; Machine learning; Neuroscience; Internal medicine; Computer science; Dementia; Nuclear medicine","score_opus":0.11170715323788596,"score_gpt":0.4238099032803553,"score_spread":0.31210275004246935,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4293582093","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957879,0.00012659935,0.00083997066,0.0025518914,0.00023305796,0.00032375532,0.0000059588933,0.000014125911,0.000116696145],"genre_scores_gemma":[0.9957832,0.000030672218,0.0013225842,0.0023275588,0.00039066482,0.000013747727,0.000039569502,0.000019825206,0.00007216974],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99582183,0.0012335791,0.001425606,0.000211322,0.0010629338,0.00024474753],"domain_scores_gemma":[0.9970459,0.0011547816,0.0007001539,0.00008092389,0.0004972812,0.00052096864],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0054250876,0.00011671279,0.0004214299,0.0003368295,0.00017669902,0.000033436583,0.00010434982,0.000037338243,0.00039283035],"category_scores_gemma":[0.008461807,0.00010765873,0.0002476091,0.00045468012,0.0001530932,0.00021350813,0.0001083678,0.0014035213,0.0000035484848],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023117475,0.00050571974,0.9897329,0.00005273386,0.00005430202,0.00069555396,0.0000927047,0.0017667947,0.0007647149,0.0000041986013,0.000028021166,0.0039906166],"study_design_scores_gemma":[0.0070771733,0.0015407536,0.86641634,0.00042081712,0.0002193913,0.000057717134,0.00068642834,0.12224095,0.00029155303,0.00042146357,0.0005362979,0.00009111897],"about_ca_topic_score_codex":0.000026244144,"about_ca_topic_score_gemma":0.0000051909437,"teacher_disagreement_score":0.12331656,"about_ca_system_score_codex":0.0001298306,"about_ca_system_score_gemma":0.0012628209,"threshold_uncertainty_score":0.9998903},"labels":[],"label_agreement":null},{"id":"W4295423187","doi":"10.1172/jci159579","title":"Immune dysfunction signatures predict outcomes and define checkpoint blockade–unresponsive microenvironments in acute myeloid leukemia","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cancer Immunotherapy and Biomarkers","field":"Medicine","cited_by":92,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre","funders":"National Cancer Institute; Huntsman Cancer Foundation; Genentech; National Institutes of Health; Technische Universität Dresden; Fonds National de la Recherche Luxembourg; Johns Hopkins University; American Society for Transplantation and Cellular Therapy; Qatar National Research Fund; American Society of Clinical Oncology; Huntsman Cancer Institute; National Heart, Lung, and Blood Institute; John and Lucille Van Geest Foundation; Gabrielle's Angel Foundation for Cancer Research; American Association for Cancer Research; St. Baldrick's Foundation; Trent University; Ladies Leukemia League; Leukemia and Lymphoma Society; Stand Up To Cancer; Entertainment Industry Foundation; U.S. Department of Defense; Rally Foundation; Children's Hospital of Philadelphia; Nottingham Trent University; Conquer Cancer Foundation","keywords":"Myeloid leukemia; Medicine; Immune checkpoint; Blockade; Immunotherapy; Oncology; CD8; Immune system; Leukemia; Effector; Internal medicine; Immunology; Cancer research; Receptor","score_opus":0.030171004445256167,"score_gpt":0.3197234006004307,"score_spread":0.28955239615517453,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4295423187","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9920165,0.001493478,0.000028784732,0.0055407826,0.00064515305,0.00022878646,0.000009932838,0.000008260593,0.000028318764],"genre_scores_gemma":[0.99581164,0.0009201238,0.0009204864,0.0017655578,0.00015632622,0.000009977613,0.000021854978,0.000015922156,0.00037812674],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9973664,0.00033647523,0.0015251492,0.00017782707,0.00045058187,0.00014353178],"domain_scores_gemma":[0.9983861,0.0003523864,0.0009201987,0.00014367893,0.000057923105,0.00013974754],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022383304,0.00013530615,0.0005323471,0.00020935382,0.000088961024,0.000015051809,0.000077029,0.00011943665,0.00014776616],"category_scores_gemma":[0.0005935045,0.000108227076,0.00024408066,0.00019504318,0.00021048721,0.00013789232,0.00006752384,0.0008748621,0.0000015528212],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.016173229,0.00028656365,0.5885846,0.000037739388,0.00078195013,0.00027003846,0.0004581181,0.0002806698,0.3796631,0.000011220828,0.0011845051,0.012268256],"study_design_scores_gemma":[0.008073449,0.0017831987,0.9798788,0.0000960967,0.00022373784,0.00042140248,0.00019865573,0.00021075996,0.006319815,0.00040509558,0.0022899092,0.0000991224],"about_ca_topic_score_codex":0.00003804641,"about_ca_topic_score_gemma":0.0000036749025,"teacher_disagreement_score":0.39129415,"about_ca_system_score_codex":0.0003325676,"about_ca_system_score_gemma":0.00034078085,"threshold_uncertainty_score":0.4413372},"labels":[],"label_agreement":null},{"id":"W4295787604","doi":"10.1172/jci160565","title":"Durability of protection and immunogenicity of AZD1222 (ChAdOx1 nCoV-19) COVID-19 vaccine over 6 months","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"AstraZeneca (Canada)","funders":"National Institutes of Health; AstraZeneca; National Institute of Allergy and Infectious Diseases; Bill and Melinda Gates Foundation; Pfizer; Gilead Sciences; BioFire Diagnostics; Sanofi","keywords":"Medicine; Vaccination; Placebo; Incidence (geometry); Clinical endpoint; Immunogenicity; Coronavirus disease 2019 (COVID-19); Randomized controlled trial; Internal medicine; Vaccine efficacy; Immunology; Antibody; Disease; Infectious disease (medical specialty); Pathology","score_opus":0.14637918739366124,"score_gpt":0.44182263025039664,"score_spread":0.2954434428567354,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4295787604","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99265003,0.00027445785,0.00077125203,0.0053113787,0.0002395418,0.00068485155,0.000013382493,0.000010918861,0.000044177406],"genre_scores_gemma":[0.9848045,0.000016437825,0.0007259038,0.014203378,0.00020351922,0.000019994086,0.0000017942702,0.000013195966,0.000011292455],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9958486,0.0006993008,0.0021085273,0.0002384398,0.0009454669,0.00015966003],"domain_scores_gemma":[0.99666655,0.0008839364,0.0013263192,0.00031624243,0.0005362212,0.000270701],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.006882838,0.0001225404,0.00074165454,0.00029236567,0.00010909251,0.000009580213,0.00017754872,0.0001267185,0.000057949055],"category_scores_gemma":[0.01634904,0.00010336831,0.0002983292,0.0005819842,0.00021732812,0.00015392234,0.0001572,0.00085719983,0.0000013051487],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008372099,0.00070786895,0.74214154,0.0005298717,0.00019943787,0.000028861346,0.00065941154,0.00013667715,0.24174069,0.00011923788,0.00091029564,0.0044540297],"study_design_scores_gemma":[0.010960786,0.008838843,0.8383039,0.00016530616,0.0002745671,0.00026445475,0.0004038731,0.0027357335,0.10373174,0.011478414,0.022635473,0.00020690273],"about_ca_topic_score_codex":0.00062931405,"about_ca_topic_score_gemma":0.000033529544,"teacher_disagreement_score":0.13800895,"about_ca_system_score_codex":0.00024422308,"about_ca_system_score_gemma":0.001453124,"threshold_uncertainty_score":0.9919367},"labels":[],"label_agreement":null},{"id":"W4295907188","doi":"10.1172/jci152961","title":"Haploinsufficiency of CYP8B1 associates with increased insulin sensitivity in humans","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Drug Transport and Resistance Mechanisms","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Biomedical Research Council; National Medical Research Council; Medical Research Council; Public Health England","keywords":"Internal medicine; Insulin; Endocrinology; Insulin resistance; Insulin receptor; Biology; Chemistry; Medicine","score_opus":0.045259975679720725,"score_gpt":0.33021660335115244,"score_spread":0.2849566276714317,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4295907188","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997599,0.00008279503,0.000304327,0.0014582301,0.00016888768,0.0001350188,0.000006813636,0.0000075941502,0.00023733238],"genre_scores_gemma":[0.99696225,0.000036293717,0.0023951402,0.00042583275,0.000109956265,0.0000019330125,0.00001086995,0.000010719403,0.00004699489],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99753135,0.00030452522,0.0012836249,0.00012105648,0.0006393806,0.000120048455],"domain_scores_gemma":[0.99808663,0.00033089917,0.001079936,0.000110542744,0.00024759318,0.00014439994],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0043874686,0.00008542715,0.0005847795,0.00016999518,0.000055922967,0.0000045122297,0.00006629464,0.0000700188,0.000044239674],"category_scores_gemma":[0.0006302931,0.00006376759,0.00016335642,0.00037420887,0.00015535686,0.000093390314,0.000014235342,0.0006778203,7.3634544e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010900215,0.0011083805,0.9840959,0.00006074558,0.00006838247,0.00032583185,0.0005461328,0.0007456092,0.010561833,0.0006663839,0.00007372592,0.0006571009],"study_design_scores_gemma":[0.003625562,0.0019491524,0.98746794,0.00023274781,0.00012700306,0.000037413625,0.0004841005,0.00048013273,0.0032214685,0.0021299631,0.00016494478,0.00007954143],"about_ca_topic_score_codex":0.000055768316,"about_ca_topic_score_gemma":0.00009907988,"teacher_disagreement_score":0.0073403646,"about_ca_system_score_codex":0.00006861905,"about_ca_system_score_gemma":0.0005766632,"threshold_uncertainty_score":0.29448298},"labels":[],"label_agreement":null},{"id":"W4296685469","doi":"10.1172/jci146095","title":"Neonatal hyperoxia in mice triggers long-term cognitive deficits via impairments in cerebrovascular function and neurogenesis","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Neonatal Respiratory Health Research","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Thermo Fisher Scientific (Canada); Children's Hospital of Eastern Ontario; Ottawa Hospital; University of Ottawa","funders":"Canadian Institutes of Health Research; University of Texas Health Science Center at San Antonio; Ontario Institute for Regenerative Medicine; Fundação de Amparo à Pesquisa do Estado de São Paulo; Génome Québec; Ottawa Hospital Research Institute; McMaster University; Texas Biomedical Research Institute; Stem Cell Network; University of Ottawa","keywords":"Neurogenesis; Bronchopulmonary dysplasia; Hyperoxia; Neuroscience; Medicine; Neural stem cell; Population; Cognitive decline; Progenitor cell; Psychology; Stem cell; Pathology; Internal medicine; Biology; Disease; Lung; Gestational age; Pregnancy; Dementia","score_opus":0.09102071060534352,"score_gpt":0.4050582111634092,"score_spread":0.3140375005580657,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4296685469","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99656737,0.0017669073,0.00010317939,0.00073389267,0.00030273318,0.00050185114,0.000004297018,0.000006303579,0.0000134912725],"genre_scores_gemma":[0.9974991,0.00031911192,0.000121609264,0.0018398003,0.00014466207,0.00001922744,0.000013128564,0.000020619265,0.000022753236],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9960447,0.0010265008,0.0015321102,0.00026451776,0.0008804569,0.0002517186],"domain_scores_gemma":[0.99778366,0.0009250939,0.00054127135,0.00010228165,0.00022170617,0.00042600665],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004179148,0.00012545618,0.0005095346,0.00051258836,0.00007648402,0.000014156527,0.00009370818,0.000111452406,0.00008943734],"category_scores_gemma":[0.0025294276,0.000118642034,0.00014846427,0.00058991666,0.00015451628,0.0002536861,0.00008625868,0.0012865072,0.000007316202],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027594515,0.00027882832,0.91933984,0.0001729738,0.000048746842,0.00060178246,0.00009685725,0.000029020966,0.001460609,0.000003458362,0.000015898167,0.07519254],"study_design_scores_gemma":[0.007926101,0.0028849496,0.98692846,0.0002005126,0.000079247344,0.0005466437,0.00012925114,0.00039095315,0.00046539522,0.00024850568,0.00011336155,0.000086599],"about_ca_topic_score_codex":0.000051315885,"about_ca_topic_score_gemma":0.000044905377,"teacher_disagreement_score":0.07510594,"about_ca_system_score_codex":0.00021387078,"about_ca_system_score_gemma":0.0007114234,"threshold_uncertainty_score":0.5589305},"labels":[],"label_agreement":null},{"id":"W4296687832","doi":"10.1172/jci160101","title":"Mesenchymal cell replacement corrects thymic hypoplasia in murine models of 22q11.2 deletion syndrome","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Congenital heart defects research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; National Institute of Allergy and Infectious Diseases; National Institutes of Health; University of Texas Southwestern Medical Center; Jeffrey Modell Foundation","keywords":"Mesenchymal stem cell; Mesenchyme; Biology; Embryonic stem cell; Cell biology; Extracellular matrix; DiGeorge syndrome; Pathology; Immunology; Genetics; Medicine; Gene","score_opus":0.055268725461283176,"score_gpt":0.35187864918323086,"score_spread":0.29660992372194767,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4296687832","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99832267,0.00037503717,0.00025979936,0.000245039,0.00032960594,0.00018136256,0.000006730018,0.0000021144613,0.00027763098],"genre_scores_gemma":[0.99858,0.00012753498,0.00070708175,0.00012028171,0.000099775556,0.000008423344,0.000024010624,0.000012718504,0.00032021743],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974185,0.000590961,0.0011407707,0.0001929173,0.00049582485,0.00016097547],"domain_scores_gemma":[0.9987519,0.00014877785,0.0005550118,0.00020438213,0.00019910242,0.0001408222],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026470865,0.00009071909,0.0002924759,0.00014599948,0.00004419215,0.000008652835,0.00018950157,0.0000969279,0.000050196144],"category_scores_gemma":[0.00063915184,0.00008874298,0.0001684419,0.00020682544,0.00009511852,0.0000155845,0.00017761363,0.0004660158,0.0000023444475],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004535378,0.0015656761,0.21494547,0.00028674756,0.00020380488,0.00026896843,0.00034747797,0.058058776,0.7023499,0.00017535259,0.0066900766,0.010572381],"study_design_scores_gemma":[0.02025376,0.048090417,0.29989833,0.00042585048,0.00024411087,0.0031999717,0.0010754345,0.10163687,0.49565625,0.016597042,0.011632339,0.0012896276],"about_ca_topic_score_codex":0.000021466692,"about_ca_topic_score_gemma":0.00002072557,"teacher_disagreement_score":0.20669365,"about_ca_system_score_codex":0.000048212154,"about_ca_system_score_gemma":0.00039871273,"threshold_uncertainty_score":0.36188334},"labels":[],"label_agreement":null},{"id":"W4300003374","doi":"10.1172/jci163553","title":"GIGYF1-disturbed IGF-1R recycling: a potential contributor to autism spectrum disorder pathogenesis?","year":2022,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Genetics and Neurodevelopmental Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Institute of Aging","funders":"China Postdoctoral Science Foundation","keywords":"Autism spectrum disorder; Pathogenesis; Autism; Neurodevelopmental disorder; Disease; Neuroscience; Psychology; Genetics; Medicine; Biology; Psychiatry; Immunology; Pathology","score_opus":0.028471252196197123,"score_gpt":0.30568361349643397,"score_spread":0.27721236130023685,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4300003374","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6310068,0.0006115338,0.0007787589,0.36306053,0.003848837,0.000442793,0.00012010459,0.000011159908,0.000119516015],"genre_scores_gemma":[0.41741595,0.0010592038,0.003134127,0.56805056,0.0051115532,0.000049571503,0.0014753166,0.00019751348,0.0035061897],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9955766,0.00062817027,0.0020634574,0.0005987856,0.00071300333,0.0004199702],"domain_scores_gemma":[0.99746186,0.000103564314,0.0015531831,0.00041372387,0.00015322707,0.00031446118],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00117379,0.0003875997,0.00074807816,0.00017172407,0.00016691169,0.000083167804,0.0006026803,0.0008105232,0.000115495226],"category_scores_gemma":[0.0010215398,0.0003709678,0.00067688565,0.00016309731,0.00015033229,0.000007104759,0.00029845606,0.0015058722,0.000015637579],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00056544313,0.00018020972,0.0036619229,0.000075517375,0.00045890082,0.00034455903,0.00006261286,0.00045949648,0.056759603,0.000019507428,0.9341968,0.0032154259],"study_design_scores_gemma":[0.0015875284,0.0021342486,0.034734294,0.00005792902,0.0001948583,0.00010092437,0.00002515981,0.000026306687,0.001995303,0.001385714,0.95722896,0.00052879873],"about_ca_topic_score_codex":0.0000114595505,"about_ca_topic_score_gemma":0.000015306994,"teacher_disagreement_score":0.2135908,"about_ca_system_score_codex":0.00004679811,"about_ca_system_score_gemma":0.00072926236,"threshold_uncertainty_score":0.99987423},"labels":[],"label_agreement":null},{"id":"W4306360085","doi":"10.1172/jci164219","title":"The curious case of tryptophan in pregnancy","year":2022,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Pregnancy and preeclampsia studies","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"University of Toronto; Heart and Stroke Foundation of Canada","keywords":"Preeclampsia; Pregnancy; Kynurenine; Medicine; Fetus; Kidney; Kynurenine pathway; Ischemia; Tryptophan; Physiology; Immunology; Endocrinology; Bioinformatics; Internal medicine; Biology; Genetics","score_opus":0.1089360297782825,"score_gpt":0.3951994232567567,"score_spread":0.28626339347847424,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4306360085","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.117900476,0.027993504,0.000016475886,0.8483198,0.003125009,0.00069009484,0.000021985838,0.000012953097,0.0019196749],"genre_scores_gemma":[0.27797866,0.032184567,0.002975134,0.66548884,0.01646276,0.00011411231,0.00010818168,0.00017433357,0.004513417],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.995526,0.0008283653,0.0027360127,0.00017443082,0.0005379852,0.00019718501],"domain_scores_gemma":[0.9937812,0.00293446,0.002606637,0.00034209093,0.00024685264,0.000088773835],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0020654143,0.00017928869,0.0010180979,0.00015684115,0.00010979564,0.000012803263,0.00022387771,0.0004587104,0.000053647484],"category_scores_gemma":[0.0039251396,0.00011444844,0.000503117,0.00023772281,0.00043055913,0.00009294048,0.00008210649,0.0042768344,0.000001855801],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005953668,0.00019651973,0.036397383,0.0010152654,0.0006957827,0.03375641,0.0011858635,0.000015032175,0.000018013165,0.00022675998,0.8922044,0.03369318],"study_design_scores_gemma":[0.007235515,0.0049202763,0.02939412,0.01301109,0.0013028625,0.012450834,0.00038948233,0.00011752624,0.00019878724,0.036574826,0.89396435,0.0004403149],"about_ca_topic_score_codex":0.00002736019,"about_ca_topic_score_gemma":0.000028683231,"teacher_disagreement_score":0.18283099,"about_ca_system_score_codex":0.000060600454,"about_ca_system_score_gemma":0.0005800834,"threshold_uncertainty_score":0.99802035},"labels":[],"label_agreement":null},{"id":"W4307407906","doi":"10.1172/jci154684","title":"Mitochondrial dysfunction reactivates α-fetoprotein expression that drives copper-dependent immunosuppression in mitochondrial disease models","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Inflammasome and immune disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of Saskatchewan","funders":"Canadian Institutes of Health Research; National Institute of General Medical Sciences; Alabama Agricultural Experiment Station; National Institutes of Health; National Institute of Diabetes and Digestive and Kidney Diseases; McGill University","keywords":"Biology; Mitochondrion; Immunology; Immune system; Cell biology","score_opus":0.03587115929542393,"score_gpt":0.3032968487810136,"score_spread":0.26742568948558965,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4307407906","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946124,0.0007922133,0.0008140966,0.0006571868,0.0026706976,0.00033327116,0.000010492549,0.000007053305,0.00010257589],"genre_scores_gemma":[0.9970505,0.00033701284,0.0009200879,0.00025491114,0.00097406324,0.000045888773,0.0001451673,0.000025827148,0.00024649524],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99691284,0.0007852459,0.0012067662,0.0003217369,0.0005624072,0.00021100698],"domain_scores_gemma":[0.9982728,0.00008703209,0.0010104595,0.00031474905,0.00014363157,0.00017132278],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008003837,0.0001814862,0.00033660867,0.00014229995,0.00018341081,0.000039069673,0.00030714448,0.00017773465,0.000058295984],"category_scores_gemma":[0.0007475148,0.0001608471,0.0003048524,0.00010054297,0.000117041796,0.000081874045,0.00021812433,0.000632572,0.0000028178526],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0047886358,0.00026293332,0.009815371,0.0000136959225,0.000039532406,0.000015887956,0.00016026814,0.010011012,0.96964973,0.000029063493,0.0033858942,0.0018279635],"study_design_scores_gemma":[0.013183704,0.0027711433,0.030827353,0.00032767013,0.00011400326,0.000042014435,0.0014290342,0.0023280233,0.92202026,0.011186435,0.015081494,0.0006888908],"about_ca_topic_score_codex":0.000017806313,"about_ca_topic_score_gemma":0.00000514725,"teacher_disagreement_score":0.04762951,"about_ca_system_score_codex":0.00004793009,"about_ca_system_score_gemma":0.00034384028,"threshold_uncertainty_score":0.6559155},"labels":[],"label_agreement":null},{"id":"W4307717490","doi":"10.1172/jci163670","title":"Epigenetics in glaucoma: a link between DNA methylation and neurodegeneration","year":2022,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Glaucoma and retinal disorders","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Center for Advancing Translational Sciences; National Eye Institute; School of Medicine, Stanford University; National Institutes of Health; Children's Health Research Institute; U.S. Department of Veterans Affairs; American Glaucoma Society; Research to Prevent Blindness","keywords":"Optic nerve; Epigenetics; Neurodegeneration; Haploinsufficiency; Biology; Glaucoma; Normal tension glaucoma; Retinal degeneration; Genetics; DNA methylation; Protein arginine methyltransferase 5; Methyltransferase; Histone; Cell biology; Neuroscience; Methylation; Medicine; Gene; Pathology; Open angle glaucoma; Phenotype; Gene expression","score_opus":0.07509897116984104,"score_gpt":0.3561838916366371,"score_spread":0.28108492046679606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4307717490","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.56931925,0.00039871945,0.00008171331,0.42943555,0.00049911684,0.00019646657,0.0000041291414,0.000006141579,0.000058934656],"genre_scores_gemma":[0.30449507,0.0023228861,0.0050483355,0.65263164,0.03330285,0.000019989373,0.001115765,0.00016411774,0.00089932024],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99558765,0.0009053822,0.0023771387,0.0002365243,0.00070763007,0.00018566605],"domain_scores_gemma":[0.9967912,0.0009348697,0.0016657516,0.00019267332,0.00024415003,0.00017139968],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0020836594,0.0002153034,0.00094687706,0.0004164656,0.000061011964,0.00003369756,0.00011894771,0.0007714734,0.0000573297],"category_scores_gemma":[0.002043513,0.00018485828,0.0002773758,0.00028459626,0.00018365713,0.00012147593,0.00004886126,0.003792647,0.0000031819313],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002043426,0.000055075583,0.76941144,0.00034179876,0.00015725344,0.0004039966,0.00022352068,0.000010546674,0.00063379866,0.000023544073,0.19442993,0.034104735],"study_design_scores_gemma":[0.0016433669,0.0016753186,0.75071967,0.00018385115,0.00049976277,0.00008925124,0.000019695495,0.00023746786,0.00019780874,0.0032173682,0.24134925,0.00016722138],"about_ca_topic_score_codex":0.00001614722,"about_ca_topic_score_gemma":0.000006566434,"teacher_disagreement_score":0.26482418,"about_ca_system_score_codex":0.00006599666,"about_ca_system_score_gemma":0.00040459074,"threshold_uncertainty_score":0.99850565},"labels":[],"label_agreement":null},{"id":"W4308054132","doi":"10.1172/jci153943","title":"SCF-SKP2 E3 ubiquitin ligase links mTORC1/ER stress/ISR with YAP activation in murine renal cystogenesis","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Genetic and Kidney Cyst Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research; National Institute of Diabetes and Digestive and Kidney Diseases; Kidney Foundation of Canada","keywords":"mTORC1; SKP2; Tauroursodeoxycholic acid; Biology; Cell biology; Ubiquitin ligase; Kinase; PI3K/AKT/mTOR pathway; Ribosomal protein s6; Unfolded protein response; Cancer research; Chemistry; Signal transduction; Ubiquitin; Biochemistry; P70-S6 Kinase 1; Endoplasmic reticulum","score_opus":0.031850899587604044,"score_gpt":0.3188883993612825,"score_spread":0.28703749977367843,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4308054132","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99741143,0.00017590322,0.0005736442,0.0013787635,0.00016163502,0.00014415194,0.000021571672,0.0000050432686,0.00012784151],"genre_scores_gemma":[0.99584126,0.000073461415,0.0014074144,0.0015281219,0.0007810237,0.00001709632,0.00012534438,0.000021659416,0.00020462323],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977479,0.00040749015,0.0009990574,0.00025317323,0.00041433924,0.00017805696],"domain_scores_gemma":[0.99839425,0.000086157874,0.0008004725,0.00021394623,0.00021645635,0.0002887369],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010306975,0.0001454938,0.00028929446,0.00011064107,0.00009516664,0.00002395363,0.00021242545,0.00017620696,0.00007399937],"category_scores_gemma":[0.00085334893,0.00012455779,0.00015949382,0.00019222392,0.00012979451,0.000016306405,0.00009709323,0.00048224177,0.0000020592504],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0030666576,0.00096798496,0.24410167,0.00008098664,0.00024122906,0.00007733396,0.00018377235,0.013872248,0.7224198,0.00007882146,0.009757812,0.0051516867],"study_design_scores_gemma":[0.005202636,0.0043513076,0.25434378,0.0002319656,0.00016252276,0.00008533236,0.00043430788,0.0003687842,0.7199214,0.001137673,0.0133192325,0.00044105557],"about_ca_topic_score_codex":0.000019614701,"about_ca_topic_score_gemma":0.00001896036,"teacher_disagreement_score":0.013503464,"about_ca_system_score_codex":0.000034483623,"about_ca_system_score_gemma":0.0006521228,"threshold_uncertainty_score":0.5079319},"labels":[],"label_agreement":null},{"id":"W4308992051","doi":"10.1172/jci159348","title":"Human Dectin-1 deficiency impairs macrophage-mediated defense against phaeohyphomycosis","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity; McGill University Health Centre","funders":"Medical Research Council; NIH Clinical Center; National Cancer Institute; U.S. Department of Health and Human Services; National Institutes of Health; Hackensack Meridian Health; NHLBI Division of Intramural Research; National Institute on Deafness and Other Communication Disorders; Wellcome Trust; National Institute of Allergy and Infectious Diseases; Division of Intramural Research, National Institute of Allergy and Infectious Diseases","keywords":"Phaeohyphomycosis; Immunology; Macrophage; Biology; Immunologic Deficiency Syndromes; Medicine; Immune system; Microbiology; Genetics","score_opus":0.07757930275382934,"score_gpt":0.3798325641240747,"score_spread":0.30225326137024533,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4308992051","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99381304,0.0007382233,0.00005402865,0.0018386232,0.0010149168,0.00016287462,0.000008340206,0.000033652774,0.0023363323],"genre_scores_gemma":[0.99616164,0.00015296078,0.00091721537,0.001999344,0.00048345403,0.000010095379,0.00001273689,0.000018580788,0.00024394953],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997083,0.00037050576,0.0016177417,0.00017783053,0.00055352197,0.00019736707],"domain_scores_gemma":[0.99757415,0.0005282023,0.0009819381,0.00017277143,0.00042461793,0.00031832943],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026284298,0.00013481967,0.0005506652,0.00023194661,0.0005228755,0.000021390444,0.000109292494,0.00008340076,0.0001926329],"category_scores_gemma":[0.0030247318,0.00011035097,0.00042814575,0.00053055584,0.00022822905,0.00012725174,0.00008547439,0.0010494221,0.000016828737],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004933146,0.0018234913,0.91837144,0.000109258,0.00046265638,0.0005469051,0.0011322129,0.0012582375,0.029053189,0.0006635844,0.037061173,0.009024563],"study_design_scores_gemma":[0.008851788,0.01035648,0.9458631,0.0002075807,0.00079953176,0.0012055412,0.0026451212,0.0014315497,0.0028528282,0.002843789,0.02247245,0.0004702009],"about_ca_topic_score_codex":0.000018369043,"about_ca_topic_score_gemma":0.0000058596424,"teacher_disagreement_score":0.027491722,"about_ca_system_score_codex":0.00014411015,"about_ca_system_score_gemma":0.00029749318,"threshold_uncertainty_score":0.4559275},"labels":[],"label_agreement":null},{"id":"W4308992074","doi":"10.1172/jci164747","title":"Does treating with anti–PD-1 to improve glomerular health come without a cost?","year":2022,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Renal Diseases and Glomerulopathies","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Medicine; Urology; Chemistry; Intensive care medicine","score_opus":0.05180032849622195,"score_gpt":0.3846905068450426,"score_spread":0.3328901783488206,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4308992074","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.23726487,0.00061406667,0.00015709763,0.75917464,0.0014800455,0.0010466641,0.00010761681,0.00003420073,0.00012079714],"genre_scores_gemma":[0.029351592,0.00085495214,0.0058595487,0.9496958,0.012084122,0.000049300157,0.00029591614,0.00012728552,0.001681437],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99411225,0.0006779642,0.0028151274,0.00046305335,0.0015038354,0.00042779298],"domain_scores_gemma":[0.9939776,0.0006354394,0.0034760777,0.0004521032,0.0005749646,0.0008837979],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.002262178,0.0003906822,0.0020817264,0.00038184537,0.00017099301,0.00008962211,0.00023541276,0.00038141338,0.00015199494],"category_scores_gemma":[0.002000863,0.00020819246,0.00061751646,0.00043432313,0.00025603198,0.00020241085,0.00007678665,0.0035811209,0.000013537043],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023063922,0.0003282802,0.25677073,0.0026524381,0.0010544099,0.0024157765,0.00047304085,0.00011181514,0.00018510401,0.000020220683,0.7104523,0.023229472],"study_design_scores_gemma":[0.005301268,0.015442864,0.1092067,0.0055480013,0.0013328916,0.0004893275,0.00028840837,0.00013429599,0.000111556255,0.00060655,0.86091787,0.0006202715],"about_ca_topic_score_codex":0.000084606196,"about_ca_topic_score_gemma":0.0000072587545,"teacher_disagreement_score":0.20791328,"about_ca_system_score_codex":0.00023999566,"about_ca_system_score_gemma":0.0019236449,"threshold_uncertainty_score":0.99871767},"labels":[],"label_agreement":null},{"id":"W4309202711","doi":"10.1172/jci159344","title":"Parvalbumin interneuron loss mediates repeated anesthesia-induced memory deficits in mice","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Anesthesia and Neurotoxicity Research","field":"Neuroscience","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University; Université de Montréal; Montreal Neurological Institute and Hospital; Canadian Sleep & Circadian Network; McGill University","funders":"Canadian Institutes of Health Research","keywords":"Parvalbumin; Interneuron; Neuroscience; Hippocampus; Memory consolidation; Excitatory postsynaptic potential; Inhibitory postsynaptic potential; Biology","score_opus":0.16125083708484184,"score_gpt":0.39029504350244354,"score_spread":0.2290442064176017,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309202711","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934889,0.000024485576,0.000004878108,0.0057869367,0.00028481052,0.00026738635,9.608599e-7,0.00002344084,0.00011817103],"genre_scores_gemma":[0.9957183,0.000069902686,0.000055745524,0.0037142318,0.00018788931,0.000015654605,0.0000014046544,0.000026306769,0.0002105526],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9932791,0.0031550876,0.0018077492,0.0003768558,0.0010768668,0.00030434894],"domain_scores_gemma":[0.995333,0.0029531594,0.0010903821,0.00021722415,0.00011564232,0.0002905706],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.004193386,0.00015816471,0.00049401674,0.0003399652,0.00014112657,0.000052066433,0.0006859906,0.00010569578,0.000113357804],"category_scores_gemma":[0.009234165,0.00014200341,0.0002114049,0.00073872914,0.00025333214,0.00036812376,0.000118722564,0.0016211867,0.000030362162],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015734428,0.0009113166,0.14054096,0.000049943,0.00001263615,0.0070924917,0.0012482946,0.0008713628,0.8408332,0.00037944873,0.0009017932,0.0055851424],"study_design_scores_gemma":[0.0028135,0.0034053426,0.115030795,0.00011422697,0.00003190865,0.0037832048,0.00037466397,0.0039105034,0.86630297,0.00256139,0.0013130679,0.00035844627],"about_ca_topic_score_codex":0.000022990409,"about_ca_topic_score_gemma":0.00000579995,"teacher_disagreement_score":0.025510166,"about_ca_system_score_codex":0.00007480769,"about_ca_system_score_gemma":0.00034605205,"threshold_uncertainty_score":0.9991115},"labels":[],"label_agreement":null},{"id":"W4312001791","doi":"10.1172/jci164915","title":"Loss of LGR4/GPR48 causes severe neonatal salt wasting due to disrupted WNT signaling altering adrenal zonation","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Hormonal Regulation and Hypertension","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Société Française d’Endocrinologie; Ligue Contre le Cancer; Recordati Rare Diseases; National Science Foundation","keywords":"Wnt signaling pathway; Endocrinology; Internal medicine; Aldosterone; Adrenal cortex; Biology; Signal transduction; Cell biology; Medicine","score_opus":0.09386215309204636,"score_gpt":0.3704240081121999,"score_spread":0.2765618550201535,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4312001791","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99351686,0.00014359067,0.0019084521,0.0036222246,0.00056921697,0.00017518036,0.0000060582634,0.000015964684,0.00004245862],"genre_scores_gemma":[0.9923968,0.000014559412,0.0056322394,0.0011427351,0.0006880531,0.000003046496,0.000027976794,0.00001993694,0.00007465137],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9966657,0.00025500805,0.0017807428,0.0001746778,0.0009715041,0.0001523787],"domain_scores_gemma":[0.99719244,0.0005718494,0.001096916,0.00011720043,0.00065679767,0.00036477193],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021544718,0.00012275462,0.0005798114,0.0002571198,0.00014027553,0.000019066443,0.0001095058,0.000082576684,0.00015519929],"category_scores_gemma":[0.0030307097,0.000106582534,0.0002352269,0.00035585187,0.00008410947,0.00020592942,0.00008976886,0.0005738669,0.000004498677],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005579067,0.0009403195,0.2980135,0.0004959848,0.0007171445,0.0021080244,0.0039948183,0.115626335,0.3766608,0.002379967,0.0023800207,0.19110402],"study_design_scores_gemma":[0.010496514,0.0068053566,0.8360617,0.0024825186,0.0008089569,0.009098994,0.0018419825,0.06304331,0.05342229,0.0042251586,0.0110040475,0.00070913153],"about_ca_topic_score_codex":0.000013918081,"about_ca_topic_score_gemma":0.0000033176823,"teacher_disagreement_score":0.5380482,"about_ca_system_score_codex":0.00011491236,"about_ca_system_score_gemma":0.00040324556,"threshold_uncertainty_score":0.43463096},"labels":[],"label_agreement":null},{"id":"W4313427324","doi":"10.1172/jci154754","title":"Canagliflozin primes antitumor immunity by triggering PD-L1 degradation in endocytic recycling","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Adenosine and Purinergic Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":75,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Artificial Intelligence in Medicine (Canada)","funders":"National Natural Science Foundation of China","keywords":"Immunity; Endocytic cycle; Canagliflozin; Degradation (telecommunications); Chemistry; Immunology; Biology; Immune system; Endocytosis; Computer science; Biochemistry; Cell; Endocrinology","score_opus":0.05954777369941462,"score_gpt":0.3626706859830168,"score_spread":0.3031229122836022,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313427324","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978663,0.00074890256,0.00041634365,0.00045297184,0.0003355573,0.000073898,0.0000025518411,0.000008126097,0.000095377654],"genre_scores_gemma":[0.9974416,0.0007296573,0.0007519027,0.00023427047,0.00049961737,0.000002104872,0.00007228372,0.000013221387,0.00025535174],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981877,0.00025948728,0.0010760278,0.00014262347,0.0001789881,0.00015517832],"domain_scores_gemma":[0.9988833,0.00018789087,0.0005671314,0.00013044164,0.00011888401,0.00011235717],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002027972,0.000095708245,0.0002529834,0.000116636664,0.000049748378,0.000024475341,0.00015381366,0.0001349803,0.000006789333],"category_scores_gemma":[0.0023206195,0.00008739146,0.000119907636,0.00027721675,0.000065055436,0.000021885524,0.000042329466,0.000307501,0.000005252576],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00049120735,0.00016817801,0.22602946,0.00009483824,0.00017102601,0.00007877252,0.0001987998,0.0052893166,0.7075091,0.000097779455,0.051055357,0.008816179],"study_design_scores_gemma":[0.006383811,0.0015087075,0.2203147,0.0007512701,0.000156005,0.00012090653,0.0007021012,0.007339221,0.7345014,0.0031557896,0.024328576,0.00073750847],"about_ca_topic_score_codex":0.00007941646,"about_ca_topic_score_gemma":0.000015590804,"teacher_disagreement_score":0.026992323,"about_ca_system_score_codex":0.000021209533,"about_ca_system_score_gemma":0.0002478049,"threshold_uncertainty_score":0.35637206},"labels":[],"label_agreement":null},{"id":"W4313427367","doi":"10.1172/jci158903","title":"Longitudinal liver sampling in patients with chronic hepatitis B starting antiviral therapy reveals hepatotoxic CD8+ T cells","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":80,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Toronto General Hospital; University Health Network","funders":"Deutsche Forschungsgemeinschaft; Gilead Sciences","keywords":"CD8; Immunology; Immune system; Cytotoxic T cell; Pathogenesis; T cell; Population; Cirrhosis; Hepatocyte; Biology; Hepatitis; Medicine; Internal medicine; In vitro","score_opus":0.15512810928406745,"score_gpt":0.41680328430164176,"score_spread":0.2616751750175743,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313427367","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987568,0.00014002963,0.00010176664,0.00034147003,0.00023531493,0.00036199327,0.000002926686,0.000024498604,0.00003520276],"genre_scores_gemma":[0.9939256,0.00014278009,0.00080847484,0.0045003737,0.00058101,0.000005179643,0.0000048075185,0.000023169368,0.00000862515],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.996891,0.00028288187,0.0014093828,0.00024110993,0.0008414812,0.000334134],"domain_scores_gemma":[0.9977955,0.0007338214,0.00072129816,0.00018855164,0.00045455186,0.00010624951],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0028504846,0.00015059274,0.0005743255,0.000342172,0.000063946914,0.00004467672,0.00013809105,0.00015122983,0.000010204699],"category_scores_gemma":[0.0011760907,0.000110855624,0.00017643794,0.00073971116,0.00019452903,0.00034353466,0.00003895771,0.000797438,0.000046264784],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006496892,0.00016282321,0.97783947,0.000068542875,0.000061525214,0.000114201874,0.00012784149,0.000015665222,0.009334529,0.000008887393,0.00021315811,0.011403692],"study_design_scores_gemma":[0.004495889,0.0025615965,0.9753491,0.00072641874,0.0000281227,0.000004086349,0.000011714193,0.0015105214,0.014140032,0.0005110767,0.00054385496,0.00011757435],"about_ca_topic_score_codex":0.00011943481,"about_ca_topic_score_gemma":0.000087105545,"teacher_disagreement_score":0.011286118,"about_ca_system_score_codex":0.00016508062,"about_ca_system_score_gemma":0.0006411867,"threshold_uncertainty_score":0.45205614},"labels":[],"label_agreement":null},{"id":"W4313545883","doi":"10.1172/jci160036","title":"A systems biology approach identifies the role of dysregulated PRDM6 in the development of hypertension","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Renin-Angiotensin System Studies","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"National Heart, Lung, and Blood Institute; Korea National Institute of Health; Cleveland Clinic; National Center for Advancing Translational Sciences; Yale University","keywords":"Biology; Renin–angiotensin system; Neural crest; Enhancer; Cell biology; Kidney development; Gene expression; Gene; Endocrinology; Internal medicine; Molecular biology; Genetics; Blood pressure; Medicine; Embryonic stem cell","score_opus":0.2012056382384472,"score_gpt":0.385608956401252,"score_spread":0.18440331816280478,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313545883","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99662775,0.000875952,0.00006152215,0.0015619108,0.00037129084,0.000333996,7.4592026e-7,0.0000069383455,0.00015990945],"genre_scores_gemma":[0.998733,0.00005913395,0.0008943671,0.00006830679,0.00018950526,0.000005792215,0.000006498856,0.0000076032206,0.000035819794],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9962711,0.00069100136,0.0023887018,0.000109601286,0.00042437253,0.0001152302],"domain_scores_gemma":[0.99652106,0.0011756477,0.001459559,0.00020702183,0.0005908339,0.00004587282],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.006590001,0.00008991273,0.0007127468,0.00017763033,0.00004626877,0.000008296085,0.00016572904,0.00013598891,7.2990343e-7],"category_scores_gemma":[0.0027075445,0.000041545532,0.00015852833,0.0005364192,0.0003278651,0.000050812872,0.000046096924,0.00026688425,0.0000035117812],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004484474,0.00033186298,0.8751012,0.00027021166,0.00085192936,0.000020627145,0.01413548,0.0005792596,0.096893474,0.0011146949,0.0034051526,0.006847639],"study_design_scores_gemma":[0.00096272444,0.00028132333,0.98454577,0.0006769461,0.00014252079,0.00011157409,0.0041157925,0.0034820247,0.0039563463,0.0011547543,0.00051825616,0.000051986168],"about_ca_topic_score_codex":0.000023790826,"about_ca_topic_score_gemma":0.0000057734046,"teacher_disagreement_score":0.10944453,"about_ca_system_score_codex":0.000018934916,"about_ca_system_score_gemma":0.00022942766,"threshold_uncertainty_score":0.3241379},"labels":[],"label_agreement":null},{"id":"W4313545983","doi":"10.1172/jci165245","title":"Clonally expanded HIV-1 proviruses with 5′-leader defects can give rise to nonsuppressible residual viremia","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":93,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal; Clinique Paro Excellence","funders":"National Institute of General Medical Sciences; NIH Office of the Director; National Heart, Lung, and Blood Institute; Center for AIDS Research, University of Washington; National Institutes of Health; National Institute of Allergy and Infectious Diseases; Johns Hopkins University; Howard Hughes Medical Institute","keywords":"Viremia; Virology; Biology; Viral load; Antiretroviral therapy; Viral replication; Human immunodeficiency virus (HIV); Virus","score_opus":0.0885554254870092,"score_gpt":0.3778661466894443,"score_spread":0.28931072120243506,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313545983","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99373,0.00016965301,0.00004428135,0.005175414,0.00028617674,0.00028875642,0.00005641975,0.000039039034,0.00021025841],"genre_scores_gemma":[0.99591017,0.00007546408,0.00093754666,0.0005407039,0.00021424891,0.000022493481,0.00009102321,0.00001914812,0.0021891855],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978351,0.000596232,0.00082592503,0.00022329536,0.000176737,0.000342738],"domain_scores_gemma":[0.99789697,0.00094236876,0.00041951725,0.0001887768,0.0003213267,0.00023105132],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0012330081,0.00014779613,0.00041645174,0.00023297223,0.00013726534,0.00003357043,0.00020984914,0.00021002827,0.00011705407],"category_scores_gemma":[0.00170423,0.00009795634,0.0001236062,0.0003449,0.000337074,0.00015673343,0.000058851787,0.0006073791,0.0012752297],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0042553125,0.0004618431,0.68566877,0.000060457136,0.001065594,0.00044652147,0.002145212,0.0003468082,0.10167825,0.00016921501,0.19697791,0.006724084],"study_design_scores_gemma":[0.009577917,0.0059005744,0.82005984,0.0005147296,0.00025672518,0.00021459552,0.00064589275,0.000011564712,0.13361728,0.0011927497,0.027657665,0.0003504927],"about_ca_topic_score_codex":0.000033086093,"about_ca_topic_score_gemma":0.00013096567,"teacher_disagreement_score":0.16932024,"about_ca_system_score_codex":0.000045887133,"about_ca_system_score_gemma":0.00079909165,"threshold_uncertainty_score":0.9995024},"labels":[],"label_agreement":null},{"id":"W4316661361","doi":"10.1172/jci167444","title":"Lessons learned: from mentored to mentor","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; National Institute of Allergy and Infectious Diseases; Astellas Pharma; Canadian Institute for Advanced Research","keywords":"Excellence; Medical education; Engineering ethics; Medical school; Medicine; Political science; Engineering","score_opus":0.3014432722189833,"score_gpt":0.46270229151794223,"score_spread":0.16125901929895892,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4316661361","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.941299,0.00003976723,0.00012235342,0.05635305,0.0009919917,0.00008918382,0.0000048647394,0.00003628952,0.0010635033],"genre_scores_gemma":[0.97756886,0.00020065438,0.0059816977,0.00912056,0.002253916,0.0000048619245,0.000042279313,0.000019447578,0.0048077037],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9982965,0.00012244609,0.0009314745,0.00012496304,0.00040285394,0.00012176781],"domain_scores_gemma":[0.99806875,0.0006746365,0.00037061507,0.00014315151,0.00020386788,0.00053898135],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014831533,0.00007222866,0.00039485394,0.00014883299,0.000031890475,0.00002165673,0.00006527048,0.000095088755,0.00021528802],"category_scores_gemma":[0.0067370185,0.00005465441,0.00017312737,0.0003236227,0.00005535969,0.00009874132,0.000021526706,0.00023745913,0.00044325975],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010357347,0.00029320468,0.30855817,0.000043465574,0.0005896762,0.00008848845,0.0010719304,0.00015334753,0.12310369,0.0010129745,0.48160422,0.08244511],"study_design_scores_gemma":[0.0043749018,0.0014804825,0.8270656,0.0004402819,0.00038438468,0.000007864406,0.0004186227,0.0015035585,0.017722307,0.018761642,0.12769428,0.00014606985],"about_ca_topic_score_codex":0.000015016239,"about_ca_topic_score_gemma":0.0000012004109,"teacher_disagreement_score":0.5185074,"about_ca_system_score_codex":0.00003418141,"about_ca_system_score_gemma":0.0002031203,"threshold_uncertainty_score":0.8065327},"labels":[],"label_agreement":null},{"id":"W4316661384","doi":"10.1172/jci163498","title":"BMX controls 3βHSD1 and sex steroid biosynthesis in cancer","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"IONICS Mass Spectrometry (Canada)","funders":"U.S. Army Medical Research and Development Command; Astellas Pharma; National Cancer Institute; National Institutes of Health; Case Western Reserve University; Prostate Cancer Foundation; U.S. Department of Defense","keywords":"Aromatase; Androgen; Endocrinology; Prostate cancer; Androgen receptor; Internal medicine; Testosterone (patch); Intracrine; Cancer research; Biology; Cancer; Medicine; Hormone; Receptor; Breast cancer; Paracrine signalling","score_opus":0.19641566806755484,"score_gpt":0.47652843413848117,"score_spread":0.28011276607092633,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4316661384","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98161507,0.0007859752,0.0000043092477,0.01712364,0.00018123147,0.00016009007,0.000003882668,0.00000953285,0.00011627808],"genre_scores_gemma":[0.99358416,0.0042838138,0.00018840395,0.0006767376,0.00040496173,0.0000073748456,0.0000035720134,0.000009007296,0.00084197737],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986166,0.00014173357,0.0007310942,0.00010505166,0.00026852978,0.00013704094],"domain_scores_gemma":[0.9986803,0.000650897,0.00025416195,0.000071418704,0.00011487491,0.00022835653],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016365066,0.000065259956,0.0003822768,0.00018745456,0.00002275516,0.000017520877,0.00004232046,0.00009359226,0.000031882355],"category_scores_gemma":[0.0010596595,0.000043493365,0.000080177146,0.00025616845,0.00015941125,0.00011607761,0.000017355613,0.00030359472,0.00000877539],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041655172,0.00006915013,0.94176984,0.000059617185,0.000102110214,0.00012233337,0.00020591995,0.000012004056,0.0058535677,0.000021150334,0.0022755954,0.04909217],"study_design_scores_gemma":[0.0054759537,0.0007629654,0.98100275,0.0005327675,0.000090608955,0.000019964344,0.0001701169,0.001268016,0.0061959093,0.001887151,0.002528796,0.00006500095],"about_ca_topic_score_codex":0.000028810116,"about_ca_topic_score_gemma":0.000018126213,"teacher_disagreement_score":0.049027167,"about_ca_system_score_codex":0.000048614347,"about_ca_system_score_gemma":0.00030089615,"threshold_uncertainty_score":0.17736079},"labels":[],"label_agreement":null},{"id":"W4316928297","doi":"10.1172/jci166710","title":"BosR and PlzA reciprocally regulate RpoS function to sustain Borrelia burgdorferi in ticks and mammals","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institutes of Health; National Institute of Allergy and Infectious Diseases; Steven and Alexandra Cohen Foundation; Connecticut Children's Medical Center; Global Lyme Alliance; East Carolina University","keywords":"rpoS; Biology; Borrelia burgdorferi; Regulon; Sigma factor; rpoN; Psychological repression; Transcription (linguistics); RNA polymerase; Microbiology; Cell biology; Genetics; Regulation of gene expression; Gene; Gene expression; RNA; Promoter","score_opus":0.03920791187023144,"score_gpt":0.3353410682005961,"score_spread":0.2961331563303647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4316928297","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958969,0.0004543644,0.00011686493,0.0023861309,0.00084411487,0.00019723165,0.0000039390325,0.000036555473,0.000063933774],"genre_scores_gemma":[0.99812305,0.00026467984,0.00011195003,0.0008741983,0.0001591685,0.0000063081716,0.000013040542,0.0000138681335,0.00043375435],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99798,0.0004426244,0.0010939377,0.00021350544,0.00005926763,0.00021064642],"domain_scores_gemma":[0.9984332,0.00068231404,0.00043135358,0.00011886393,0.00020209247,0.0001321855],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020921698,0.0001226917,0.00039123438,0.00029379968,0.000070750546,0.000031769185,0.0000755664,0.00028076913,0.00003846042],"category_scores_gemma":[0.0038046986,0.00010691955,0.00007452322,0.0002957077,0.00022640888,0.00021329409,0.00006276696,0.0004350239,0.00006179421],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024114929,0.0002063818,0.8439715,0.000105497325,0.0003248809,0.000079624304,0.0006431003,0.0003697978,0.07076843,0.0026613988,0.023234379,0.055223547],"study_design_scores_gemma":[0.00163409,0.0011907226,0.9763867,0.00015155613,0.00008290276,0.00007842018,0.00015300377,0.00006283766,0.0012649128,0.013800671,0.005063769,0.00013039086],"about_ca_topic_score_codex":0.000034197106,"about_ca_topic_score_gemma":0.000031666208,"teacher_disagreement_score":0.13241525,"about_ca_system_score_codex":0.000035517474,"about_ca_system_score_gemma":0.00016167418,"threshold_uncertainty_score":0.45548546},"labels":[],"label_agreement":null},{"id":"W4319656188","doi":"10.1172/jci161944","title":"A terpene nucleoside from M. tuberculosis induces lysosomal lipid storage in foamy macrophages","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Calcium signaling and nucleotide metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"National Institute of Allergy and Infectious Diseases; Medical Research Council; Université de Lausanne; Wellcome Trust; Francis Crick Institute; Cancer Research UK","keywords":"Tuberculosis; Chemistry; Terpene; Nucleoside; Biochemistry; Pathology; Medicine","score_opus":0.04568441172932159,"score_gpt":0.3413257984592113,"score_spread":0.2956413867298897,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319656188","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997011,0.00047031333,0.000057952497,0.001383974,0.00092695124,0.00006711323,0.000013775682,0.000012473761,0.000056439945],"genre_scores_gemma":[0.9952317,0.00057647965,0.0011083572,0.0007374678,0.0021924933,0.00000271209,0.00004412227,0.00002314556,0.00008356158],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99776417,0.00035944243,0.0011785006,0.00024398844,0.00026742296,0.00018646118],"domain_scores_gemma":[0.9987181,0.00021167519,0.00054385175,0.00019681457,0.00013212091,0.00019743034],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016518747,0.00013641342,0.00039288178,0.00014973208,0.000041844294,0.00004475398,0.00022226381,0.00025714736,0.000029578641],"category_scores_gemma":[0.0017692033,0.000119536664,0.0002592686,0.00027864164,0.00012936957,0.000020550278,0.000080813064,0.0003643546,0.000032905158],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002223985,0.00009600055,0.07710648,0.000011781813,0.000107804786,0.000053255382,0.0001383791,0.00047788303,0.90672225,0.000022815526,0.00556077,0.00948015],"study_design_scores_gemma":[0.0019005558,0.0004434026,0.7798218,0.0001403449,0.000083640094,0.000016342537,0.00011525918,0.0005527836,0.20914088,0.001522983,0.006028567,0.00023343612],"about_ca_topic_score_codex":0.00007205274,"about_ca_topic_score_gemma":0.000038145998,"teacher_disagreement_score":0.70271534,"about_ca_system_score_codex":0.000010970842,"about_ca_system_score_gemma":0.00013061859,"threshold_uncertainty_score":0.48745635},"labels":[],"label_agreement":null},{"id":"W4320709587","doi":"10.1172/jci159757","title":"Early-life peripheral infections reprogram retinal microglia and aggravate neovascular age-related macular degeneration in later life","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Neuroinflammation and Neurodegeneration Mechanisms","field":"Neuroscience","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Université de Montréal; Montreal Clinical Research Institute; Hôpital Maisonneuve-Rosemont","funders":"Alcon Research Institute; Japan Society for the Promotion of Science; Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Diabetes Canada; Natural Sciences and Engineering Research Council of Canada; Foundation Fighting Blindness; BrightFocus Foundation; Université de Montréal","keywords":"Macular degeneration; Microglia; Retinal degeneration; Medicine; Retinal; Peripheral; Biology; Immunology; Ophthalmology; Internal medicine; Inflammation","score_opus":0.087388646728236,"score_gpt":0.34476825249636417,"score_spread":0.2573796057681282,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4320709587","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949654,0.00003089644,0.00028699837,0.0033793931,0.00092031,0.00027188673,0.0000020682269,0.00009964195,0.00004341505],"genre_scores_gemma":[0.9962316,0.000409501,0.0007962183,0.0019288728,0.0002934816,0.000010337588,0.000009824006,0.00002859202,0.00029154023],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9958254,0.0010984356,0.001954158,0.00040358986,0.00048562567,0.00023279671],"domain_scores_gemma":[0.9980343,0.00031651102,0.00086976815,0.00021798829,0.00016190216,0.00039955933],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002333013,0.00017790933,0.0003899376,0.00036491436,0.00017961854,0.00022071422,0.0001459773,0.00019976836,0.000050513565],"category_scores_gemma":[0.0067335023,0.0001631517,0.00021325005,0.0008424401,0.00022644507,0.0005559145,0.000051748022,0.0006703762,0.000045875528],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000090403504,0.00009835769,0.028702928,0.000020283553,0.000018530176,0.00026839576,0.00042112378,0.003491468,0.96242976,0.0021141693,0.0007593782,0.0015852187],"study_design_scores_gemma":[0.005982088,0.0015845766,0.2644035,0.00020036669,0.00012874977,0.00034353882,0.000060031893,0.04954263,0.6575522,0.016029257,0.0035351124,0.00063797255],"about_ca_topic_score_codex":0.0000058128867,"about_ca_topic_score_gemma":0.000011735585,"teacher_disagreement_score":0.30487755,"about_ca_system_score_codex":0.000022736964,"about_ca_system_score_gemma":0.0001694274,"threshold_uncertainty_score":0.80611175},"labels":[],"label_agreement":null},{"id":"W4320709875","doi":"10.1172/jci165654","title":"Molecular pathways that drive diabetic kidney disease","year":2023,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Chronic Kidney Disease and Diabetes","field":"Medicine","cited_by":315,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Nutrition, Metabolism and Diabetes","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institutes of Health","keywords":"Kidney; Albuminuria; Kidney disease; Endocrinology; Diabetes mellitus; Podocyte; Internal medicine; Oxidative stress; Renal function; Diabetic nephropathy; Fibrosis; Medicine; Biology; Actin cytoskeleton; Proteinuria; Cell; Cytoskeleton; Biochemistry","score_opus":0.19213020124247868,"score_gpt":0.4263697159941644,"score_spread":0.23423951475168572,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4320709875","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0032911825,0.9932506,0.000022376387,0.0011747924,0.0012900096,0.00066446443,0.000091595604,0.00005885195,0.00015610947],"genre_scores_gemma":[0.00037367624,0.9941268,0.00020993227,0.0028205975,0.0018634512,0.000024388326,0.0003444263,0.00010469163,0.00013202745],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99483675,0.00058530795,0.002974372,0.0003798493,0.0008976594,0.00032608476],"domain_scores_gemma":[0.9911589,0.0012677748,0.0027866974,0.00054038275,0.00034387613,0.0039023424],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0017438971,0.00041286828,0.0030826728,0.00034512344,0.000048144666,0.000055773,0.00028027347,0.0004743743,0.000088568064],"category_scores_gemma":[0.017725768,0.00029545912,0.002695197,0.00043853107,0.00024545356,0.00016425837,0.000090710615,0.0012487076,0.0002722696],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017219438,0.00085916335,0.0077056903,0.08928492,0.0037502123,0.0036435006,0.00006892462,0.000006751027,0.000012647479,0.0009772236,0.092564665,0.8009541],"study_design_scores_gemma":[0.0022617923,0.0005500098,0.0018333193,0.10957558,0.016509088,0.00004304534,0.00001430359,0.00009733582,0.000019516345,0.007457169,0.86116517,0.00047370017],"about_ca_topic_score_codex":0.0000011164001,"about_ca_topic_score_gemma":1.09989976e-7,"teacher_disagreement_score":0.8004804,"about_ca_system_score_codex":0.00015466475,"about_ca_system_score_gemma":0.009091851,"threshold_uncertainty_score":0.99994975},"labels":[],"label_agreement":null},{"id":"W4321004502","doi":"10.1172/jci162324","title":"Coordinated activation of c-Src and FOXM1 drives tumor cell proliferation and breast cancer progression","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"FOXO transcription factor regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; McGill Genome Centre; McGill University","funders":"Canadian Institutes of Health Research; Canada Research Chairs; Fondation du cancer du sein du Québec; Fonds de Recherche du Québec - Santé; Stand Up To Cancer Canada; Stand Up To Cancer; U.S. Department of Defense; McGill University; Congressionally Directed Medical Research Programs; Breast Cancer Research Foundation","keywords":"FOXM1; Proto-oncogene tyrosine-protein kinase Src; Cancer research; Breast cancer; Biology; Cell cycle; Metastasis; Cancer; Cell growth; Tumor progression; Cell biology; Signal transduction; Genetics","score_opus":0.03762494615914933,"score_gpt":0.35626242710783873,"score_spread":0.3186374809486894,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4321004502","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980023,0.000095887546,0.00038709823,0.0011986737,0.00014247114,0.00014487159,0.000008212491,0.000006802078,0.000013675413],"genre_scores_gemma":[0.9988085,0.0002421143,0.0005376706,0.00010860361,0.00020492954,0.000004039449,0.000041280655,0.000009270561,0.000043593278],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99886835,0.00013855008,0.00062577886,0.00013309917,0.00016364892,0.00007059526],"domain_scores_gemma":[0.9988092,0.00004190714,0.00066107506,0.000065963526,0.00032980318,0.00009203365],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006273017,0.00007712565,0.00017033589,0.00008524551,0.000040319177,0.000019039377,0.000041434734,0.00011729648,0.000003880081],"category_scores_gemma":[0.00019613857,0.000063903906,0.00004897104,0.00012328615,0.0001505651,0.00003908803,0.000017724604,0.00010772732,4.913354e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022178375,0.000035355424,0.19011916,0.00006188657,0.000022543576,4.6255005e-7,0.00006965164,0.00012344624,0.80162287,0.000027890703,0.00058936974,0.0071055754],"study_design_scores_gemma":[0.0010206649,0.00039659088,0.70054466,0.00012168606,0.00003114203,0.000010761822,0.00004808015,0.0018310334,0.29524586,0.00040586028,0.00027075314,0.00007290859],"about_ca_topic_score_codex":0.0000038569488,"about_ca_topic_score_gemma":0.000002822229,"teacher_disagreement_score":0.5104255,"about_ca_system_score_codex":0.000006933219,"about_ca_system_score_gemma":0.00009890791,"threshold_uncertainty_score":0.26059258},"labels":[],"label_agreement":null},{"id":"W4321445548","doi":"10.1172/jci162685","title":"Pathogenic human variant that dislocates GATA2 zinc fingers disrupts hematopoietic gene expression and signaling networks","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Allergy and Infectious Diseases; National Cancer Institute; National Institutes of Health; Wellcome Trust; National Human Genome Research Institute; Leukemia and Lymphoma Society","keywords":"GATA2; Haematopoiesis; Gene; Biology; Zinc finger; Signal transduction; Gene expression; Genetics; Regulation of gene expression; Cancer research; Cell biology; Transcription factor; Stem cell","score_opus":0.06980995491278112,"score_gpt":0.35300984374592376,"score_spread":0.2831998888331426,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4321445548","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.989859,0.0008739139,0.00843403,0.0004556515,0.00026833772,0.00007805494,0.0000036211438,0.000008793134,0.000018639385],"genre_scores_gemma":[0.9959804,0.0011213941,0.001818316,0.00021762602,0.0006827195,0.0000062651256,0.00006628677,0.000017057679,0.00008994106],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99858636,0.00016830306,0.00071132206,0.00021052243,0.00017514722,0.00014833541],"domain_scores_gemma":[0.99885434,0.00009244615,0.0005664581,0.00019325179,0.00011342896,0.00018004961],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012684893,0.00010849981,0.00022069814,0.00004914016,0.00013470925,0.0000495564,0.00013781086,0.00017684676,0.000008626433],"category_scores_gemma":[0.00028853337,0.000087285094,0.00013516669,0.00011689419,0.00015200285,0.000017417824,0.000063748965,0.00019361857,0.0000023854213],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004932889,0.000039407598,0.020985257,0.000022744192,0.000052692187,0.00001609869,0.00008781422,0.0033246987,0.9710078,0.00009252224,0.0020308404,0.00229075],"study_design_scores_gemma":[0.0039876173,0.0015758125,0.24088615,0.0008442982,0.00036998562,0.00027507587,0.000651618,0.016005099,0.7176463,0.012361164,0.004459725,0.00093712995],"about_ca_topic_score_codex":0.000002529214,"about_ca_topic_score_gemma":0.0000018745184,"teacher_disagreement_score":0.25336152,"about_ca_system_score_codex":0.000007800302,"about_ca_system_score_gemma":0.000070534596,"threshold_uncertainty_score":0.3559383},"labels":[],"label_agreement":null},{"id":"W4322616560","doi":"10.1172/jci163239","title":"Epsilon toxin–producing Clostridium perfringens colonize the multiple sclerosis gut microbiome overcoming CNS immune privilege","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hatch (Canada)","funders":"National Institute of Allergy and Infectious Diseases; National Institute of Neurological Disorders and Stroke; National Institute of General Medical Sciences; National Institute of Mental Health; National Institutes of Health; York University; Multiple Sclerosis Society; Weill Cornell Medical College; National Multiple Sclerosis Society","keywords":"Clostridium perfringens; Microbiology; Immune system; Microbiome; Biology; Multiple sclerosis; Gut microbiome; Toxin; Microbial toxins; Immunology; Bacteria; Bioinformatics; Genetics","score_opus":0.1651832658942822,"score_gpt":0.3751648304845719,"score_spread":0.2099815645902897,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4322616560","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9751998,0.000662488,0.00002600559,0.021935005,0.0013756242,0.0005882449,0.000022818414,0.000078863166,0.000111146044],"genre_scores_gemma":[0.9938087,0.0016582819,0.0009526279,0.0005878429,0.0021840236,0.000012598383,0.000040077965,0.000060992115,0.0006948767],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9947791,0.00045863696,0.0026411763,0.00045298322,0.0010422182,0.0006258906],"domain_scores_gemma":[0.99443823,0.0023430742,0.0011764094,0.0006927803,0.0008323056,0.00051722134],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.006269106,0.00029798647,0.000961957,0.0004084683,0.00037702132,0.00012564645,0.000463064,0.00033600908,0.000114808136],"category_scores_gemma":[0.011022195,0.00021191168,0.00075806427,0.0014161274,0.00051352155,0.00026936483,0.0002514259,0.0017241796,0.00020486869],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007702896,0.00029863417,0.061238438,0.00014546484,0.00029776062,0.0001144656,0.00068169995,0.0001756097,0.91232383,0.000030318219,0.017781477,0.0061420025],"study_design_scores_gemma":[0.005475288,0.0016680978,0.47590202,0.0012230722,0.00045159904,0.0002925938,0.00056891725,0.0034157722,0.49852428,0.00015272833,0.011962227,0.0003633899],"about_ca_topic_score_codex":0.000080394566,"about_ca_topic_score_gemma":0.000019789979,"teacher_disagreement_score":0.41466358,"about_ca_system_score_codex":0.00023460962,"about_ca_system_score_gemma":0.0008672531,"threshold_uncertainty_score":0.9973084},"labels":[],"label_agreement":null},{"id":"W4322624753","doi":"10.1172/jci159940","title":"CRISPR/Cas9 screen uncovers functional translation of cryptic lncRNA-encoded open reading frames in human cancer","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cancer-related molecular mechanisms research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"IONICS Mass Spectrometry (Canada)","funders":"Congressionally Directed Medical Research Programs; National Institute of Neurological Disorders and Stroke; National Institute of General Medical Sciences; U.S. Department of Defense; National Heart, Lung, and Blood Institute; National Cancer Institute; National Institutes of Health; Cancer Prevention and Research Institute of Texas; Bristol-Myers Squibb","keywords":"Biology; GATA3; Ribosome profiling; Transcription factor; CRISPR; Computational biology; Genetics; Gene; Cancer research; Translation (biology); Messenger RNA","score_opus":0.1593472197911574,"score_gpt":0.4538938274257359,"score_spread":0.2945466076345785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4322624753","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.990628,0.00021345082,0.0068210843,0.0013229806,0.00039723032,0.00026876736,0.000013089731,0.0000054765756,0.00032991735],"genre_scores_gemma":[0.996817,0.00052064174,0.0016540643,0.00026856645,0.00040474132,0.000011138181,0.00008186673,0.000022151218,0.00021983235],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977015,0.0003171838,0.0011417833,0.0002255065,0.00043677998,0.00017722178],"domain_scores_gemma":[0.9985769,0.00013254164,0.0006311774,0.0001752192,0.00034041452,0.0001437699],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023992884,0.00010764581,0.00032359664,0.0002149451,0.000053851465,0.000037107304,0.00028962697,0.00028171838,0.00006554807],"category_scores_gemma":[0.0010097272,0.00010374715,0.00017699582,0.00043463946,0.00014327023,0.00003706471,0.00008603165,0.0004216525,0.0000039331644],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052897254,0.000065928645,0.009409544,0.00003911861,0.00015240087,0.000012039162,0.00008967726,0.01831796,0.96053225,0.00039387823,0.0041760416,0.006282217],"study_design_scores_gemma":[0.0066512194,0.0019485343,0.065371424,0.0007219002,0.00014330666,0.000016835384,0.0002848655,0.006681681,0.8968684,0.015448436,0.0054744547,0.0003889668],"about_ca_topic_score_codex":0.00023712375,"about_ca_topic_score_gemma":0.0001575762,"teacher_disagreement_score":0.06366384,"about_ca_system_score_codex":0.000049566752,"about_ca_system_score_gemma":0.00059130025,"threshold_uncertainty_score":0.4230686},"labels":[],"label_agreement":null},{"id":"W4322624768","doi":"10.1172/jci168070","title":"Chronic pain and premature mortality in men and women, using data from UK Biobank. Reply.","year":2023,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Musculoskeletal pain and rehabilitation","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Biobank; Medicine; Chronic pain; Internal medicine; Physical therapy; Bioinformatics; Biology","score_opus":0.14885249776265558,"score_gpt":0.4212355286330922,"score_spread":0.27238303087043664,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4322624768","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.80914706,0.0009931257,0.000045101584,0.18890652,0.00047607737,0.0003555866,0.00004129027,0.000013253484,0.000021968715],"genre_scores_gemma":[0.3280382,0.0033826984,0.012363896,0.6037851,0.04833497,0.000021301099,0.00311059,0.00022563346,0.00073762314],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9954669,0.001280157,0.0020431536,0.00045897422,0.0005434389,0.00020739729],"domain_scores_gemma":[0.9950727,0.0026187939,0.0013592549,0.00056990015,0.0001550953,0.00022423182],"candidate_categories":["metaresearch","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.010307577,0.00020994044,0.0009982592,0.00021651467,0.000035539808,0.00004729441,0.0001620761,0.000869774,0.000032982676],"category_scores_gemma":[0.011278419,0.00015757026,0.00011457068,0.00021746894,0.00040522078,0.00022553823,0.00011753725,0.002521964,0.0000021050516],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014766377,0.000058726553,0.45706135,0.003962898,0.00054232444,0.00026041627,0.00071206974,0.0000131167635,0.0013422631,0.000003475969,0.52999747,0.0058982074],"study_design_scores_gemma":[0.0022248023,0.0009963657,0.9517349,0.0051469076,0.00033004177,0.000019983238,0.00020314722,0.010943629,0.000007778764,0.009039304,0.019103307,0.00024983342],"about_ca_topic_score_codex":0.0001757799,"about_ca_topic_score_gemma":0.00003951939,"teacher_disagreement_score":0.5108942,"about_ca_system_score_codex":0.00017401727,"about_ca_system_score_gemma":0.000524688,"threshold_uncertainty_score":0.9997793},"labels":[],"label_agreement":null},{"id":"W4322758311","doi":"10.1172/jci163627","title":"A parathyroid hormone/salt-inducible kinase signaling axis controls renal vitamin D activation and organismal calcium homeostasis","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Parathyroid Disorders and Treatments","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; National Cancer Institute; National Institutes of Health; Canadian Institutes of Health Research; Massachusetts General Hospital; Dr. Miriam and Sheldon G. Adelson Medical Research Foundation; Harrington Discovery Institute, University Hospitals","keywords":"Parathyroid hormone; Endocrinology; Internal medicine; Vitamin D and neurology; Kidney; Calcitriol receptor; Chemistry; Homeostasis; Vitamin; Secondary hyperparathyroidism; Calcium; Biology; Medicine","score_opus":0.09807925881092149,"score_gpt":0.3800781152713157,"score_spread":0.2819988564603942,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4322758311","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941189,0.001180758,0.00074952154,0.003448621,0.00013051149,0.00026659828,0.000007656967,0.000036554644,0.00006085911],"genre_scores_gemma":[0.9964936,0.0004929832,0.0016009923,0.00073912786,0.00047433842,0.000007505947,0.000043404823,0.000024246508,0.00012382733],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99761707,0.00016791622,0.0012832804,0.00024851516,0.0004483573,0.00023486627],"domain_scores_gemma":[0.9976862,0.00054867263,0.0008371703,0.00016495687,0.0003134598,0.00044953887],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014801553,0.0001775355,0.000635179,0.0002505573,0.000114701936,0.00005371662,0.00006926476,0.00021431046,0.0000076154224],"category_scores_gemma":[0.00186653,0.00014020225,0.00019091395,0.00047867376,0.0001527004,0.00035050412,0.00002877348,0.00044523104,0.00003838532],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017273832,0.00052012055,0.05597753,0.000024808516,0.00057985215,0.0003013846,0.0005662319,0.00017323735,0.91357243,0.00022442457,0.01998203,0.0063505555],"study_design_scores_gemma":[0.021340648,0.005204676,0.80097616,0.00019628718,0.00084653613,0.0001714324,0.0004984107,0.0024554082,0.16019526,0.006214587,0.0015577967,0.00034280488],"about_ca_topic_score_codex":0.0000242513,"about_ca_topic_score_gemma":0.0000022672386,"teacher_disagreement_score":0.7533772,"about_ca_system_score_codex":0.00005441787,"about_ca_system_score_gemma":0.00034338888,"threshold_uncertainty_score":0.57172817},"labels":[],"label_agreement":null},{"id":"W4327574674","doi":"10.1172/jci166647","title":"RB1-deficient prostate tumor growth and metastasis are vulnerable to ferroptosis induction via the E2F/ACSL4 axis","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cancer, Lipids, and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":102,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia; BC Cancer Agency","funders":"National Cancer Institute; National Institutes of Health; DOD Prostate Cancer Research Program; Beth Israel Deaconess Medical Center; School of Medicine, Duke University; U.S. Department of Defense","keywords":"Prostate cancer; Cancer research; Metastasis; Prostate; E2F; Cancer; Biology; Medicine; Internal medicine; Cell cycle","score_opus":0.05225788885575229,"score_gpt":0.33901913911457865,"score_spread":0.2867612502588264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4327574674","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9890304,0.00040185748,0.00036734095,0.005844314,0.00412158,0.00017827499,0.000011723795,0.000008507666,0.000036003963],"genre_scores_gemma":[0.9893144,0.0009751635,0.0007891387,0.0018555314,0.0067970213,0.000016057154,0.00001571847,0.000018212424,0.00021878867],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99827874,0.00031786854,0.00074964133,0.00021959607,0.00026086936,0.000173308],"domain_scores_gemma":[0.9986794,0.000092369206,0.00055018335,0.00017405744,0.00028555997,0.0002184147],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021744675,0.000117558826,0.0002782539,0.00008973542,0.00015200464,0.000059831113,0.00013370122,0.00009299046,0.000005106452],"category_scores_gemma":[0.0020802869,0.0000803504,0.0001489026,0.00031335058,0.00014922085,0.000019051928,0.00007327733,0.0002962357,0.0000079660485],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007942609,0.00019264098,0.060325637,0.00012752303,0.0003873077,0.0000022308895,0.00094718434,0.0016563693,0.727846,0.00032528423,0.17120068,0.03619484],"study_design_scores_gemma":[0.0032020397,0.0023569453,0.31462473,0.00021646178,0.0005231767,0.00017028376,0.0019671828,0.0006644446,0.27162817,0.0047025676,0.3992943,0.0006497339],"about_ca_topic_score_codex":0.000035234814,"about_ca_topic_score_gemma":0.000021959931,"teacher_disagreement_score":0.45621789,"about_ca_system_score_codex":0.000010364,"about_ca_system_score_gemma":0.00012724778,"threshold_uncertainty_score":0.3276594},"labels":[],"label_agreement":null},{"id":"W4361190175","doi":"10.1172/jci165019","title":"CERT1 mutations perturb human development by disrupting sphingolipid homeostasis","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Sphingolipid Metabolism and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Hospital for Sick Children; University of Alberta; University of Victoria; University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Vagelos College of Physicians and Surgeons, Columbia University; Children's Health Foundation; Ministero della Salute; National Institutes of Health; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; École Polytechnique Fédérale de Lausanne; National Natural Science Foundation of China; Institut National de la Santé et de la Recherche Médicale; Deutsche Forschungsgemeinschaft; National Institute of Neurological Disorders and Stroke; Narodowym Centrum Nauki; Stiftung für die Erforschung der Muskelkrankheiten; National Institute for Health and Care Research; National Institute of Diabetes and Digestive and Kidney Diseases; Instituto de Salud Carlos III; Simons Foundation Autism Research Initiative; Uniwersytet Medyczny im. Piastów Slaskich we Wroclawiu; Wellcome Trust; Stiftelsen Kristian Gerhard Jebsen; National Science Foundation","keywords":"Sphingolipid; Homeostasis; Cell biology; Biology; Mutation; Computational biology; Genetics; Gene","score_opus":0.07409829802251386,"score_gpt":0.38048519157149946,"score_spread":0.30638689354898563,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4361190175","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978031,0.00028166277,0.0007139169,0.00051394943,0.00047465484,0.000064789696,0.000004095648,0.000015953836,0.00012789921],"genre_scores_gemma":[0.99491477,0.00017466935,0.0023504514,0.00056608074,0.0014905352,0.000003878562,0.00017788987,0.000021861842,0.00029985813],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99792296,0.00015576415,0.0012484471,0.00019329062,0.00028652814,0.00019301819],"domain_scores_gemma":[0.99857086,0.00012475299,0.0007051751,0.00014164187,0.00023162288,0.00022595545],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001956424,0.00012256483,0.00027740002,0.00009995659,0.00018708437,0.000050976767,0.00019216642,0.0001612749,0.00001296591],"category_scores_gemma":[0.0019621993,0.00010704621,0.00018206981,0.00022493639,0.00010944409,0.000019725547,0.000060641887,0.00023693107,0.00001625552],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000090631685,0.00015407767,0.07232682,0.00006287578,0.00028474897,0.000013433563,0.0010709418,0.00061858445,0.8453632,0.00023992133,0.045653284,0.03412145],"study_design_scores_gemma":[0.0057693403,0.0009646297,0.22059281,0.00030635472,0.00025160876,0.000071948496,0.0011339447,0.00095281826,0.4664441,0.0028440552,0.29975674,0.0009116414],"about_ca_topic_score_codex":0.000005226896,"about_ca_topic_score_gemma":0.0000041583817,"teacher_disagreement_score":0.37891912,"about_ca_system_score_codex":0.000011542906,"about_ca_system_score_gemma":0.0001966471,"threshold_uncertainty_score":0.43652177},"labels":[],"label_agreement":null},{"id":"W4362509514","doi":"10.1172/jci168595","title":"Seeking neuroprotection in multiple sclerosis: an ongoing challenge","year":2023,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Multiple Sclerosis Research Studies","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"","keywords":"Multiple sclerosis; Neuroprotection; Neuroscience; Medicine; Experimental autoimmune encephalomyelitis; Oligodendrocyte; Inflammation; Disease; Myelin sheath; Demyelinating disease; Demyelinating Disorder; Myelin; Immunology; Bioinformatics; Central nervous system; Biology; Pathology","score_opus":0.4557205031992891,"score_gpt":0.43014328022397713,"score_spread":0.025577222975311953,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4362509514","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.42819118,0.00022390926,0.000110624715,0.56831014,0.0020980549,0.00084925786,0.000008711951,0.0000949574,0.00011316187],"genre_scores_gemma":[0.5982687,0.011111426,0.005442834,0.32197434,0.061863255,0.00012363413,0.00018743532,0.00043016017,0.0005982189],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9933013,0.0012796775,0.0029859128,0.0004849891,0.0014886281,0.0004595176],"domain_scores_gemma":[0.994306,0.0022775058,0.0019024182,0.00041644103,0.0007698617,0.00032776917],"candidate_categories":["metaresearch","metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0054173917,0.00031709127,0.0013827304,0.000876795,0.00011563017,0.000077566765,0.00027503108,0.0010257065,0.000017841998],"category_scores_gemma":[0.022584455,0.00026771327,0.00048960245,0.00055936724,0.00032187832,0.00044349107,0.0001110634,0.0074777175,0.00004598475],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012727965,0.00087182806,0.18304145,0.0028533828,0.0009540067,0.0031901526,0.0018531719,0.00044913832,0.012666562,0.000005847146,0.6550299,0.13781177],"study_design_scores_gemma":[0.006927865,0.004143575,0.90065116,0.010507813,0.00027344422,0.00008688976,0.00024103865,0.013973575,0.0003107884,0.00063711585,0.061732072,0.00051465386],"about_ca_topic_score_codex":0.00012488016,"about_ca_topic_score_gemma":0.00015504357,"teacher_disagreement_score":0.7176097,"about_ca_system_score_codex":0.00021490932,"about_ca_system_score_gemma":0.00046940203,"threshold_uncertainty_score":0.9999775},"labels":[],"label_agreement":null},{"id":"W4362510201","doi":"10.1172/jci168662","title":"Glutamate shall not pass: a mechanistic role for astrocytic O-GlcNAc transferase in stress and depression","year":2023,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Fonds de Recherche du Québec - Santé; Canada First Research Excellence Fund; Canadian Institutes of Health Research; Université Laval","keywords":"Glutamatergic; Prefrontal cortex; Antidepressant; Glutamate receptor; Transferase; Neuroscience; Depression (economics); Excitatory postsynaptic potential; Biology; Biochemistry; Hippocampus; Enzyme; Receptor","score_opus":0.06713327157220897,"score_gpt":0.3711085766001823,"score_spread":0.3039753050279733,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4362510201","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9010531,0.000387159,0.004830736,0.09160955,0.0008040838,0.0010317782,0.00023586368,0.00001417876,0.000033592383],"genre_scores_gemma":[0.8898323,0.0013309905,0.004822016,0.09059833,0.010595353,0.00014902228,0.0013169335,0.00017704343,0.0011779953],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99731004,0.0003616711,0.0012927222,0.0003553285,0.0004100542,0.00027018916],"domain_scores_gemma":[0.9983535,0.00037665325,0.0005447539,0.00020080857,0.000348403,0.0001758728],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014719486,0.00020392347,0.00049757236,0.00020096148,0.000050982886,0.00006384693,0.00022701848,0.00092052645,0.000008637366],"category_scores_gemma":[0.0029161356,0.00017521901,0.00023550043,0.00010453259,0.00011007836,0.000013356637,0.0000562802,0.0011288314,0.00000442183],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0078047947,0.00060248404,0.030915283,0.005147401,0.0011317866,0.0012121409,0.00045632297,0.0018289323,0.3825702,0.00017310918,0.50745195,0.06070558],"study_design_scores_gemma":[0.033248547,0.012596502,0.06489601,0.007931441,0.0009513209,0.0003099929,0.0004391029,0.03349059,0.34529573,0.027647281,0.47020993,0.002983561],"about_ca_topic_score_codex":0.000015973175,"about_ca_topic_score_gemma":0.000068117675,"teacher_disagreement_score":0.057722017,"about_ca_system_score_codex":0.000024964178,"about_ca_system_score_gemma":0.00034017587,"threshold_uncertainty_score":0.7145224},"labels":[],"label_agreement":null},{"id":"W4367320450","doi":"10.1172/jci161453","title":"Pressure overload induces ISG15 to facilitate adverse ventricular remodeling and promote heart failure","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Signaling Pathways in Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital; McGill University; Ted Rogers Centre for Heart Research; University Health Network; University of Toronto; Toronto General Hospital; St. Michael's Hospital","funders":"Biotechnology and Biological Sciences Research Council; Heart and Stroke Foundation of Canada; Banting and Best Diabetes Centre, University of Toronto; Canadian Institutes of Health Research; University of Toronto; Diabetes Canada","keywords":"Downregulation and upregulation; Ventricular remodeling; ISG15; Pressure overload; Heart failure; Inflammation; Internal medicine; Endocrinology; Cardiomyopathy; Cell biology; Filamin; Myocyte; Diabetic cardiomyopathy; Ubiquitin; Biology; Chemistry; Medicine; Cell; Biochemistry","score_opus":0.09130328682495234,"score_gpt":0.3491667649176099,"score_spread":0.2578634780926575,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4367320450","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996712,0.00031501582,0.00024201062,0.0022741314,0.000271991,0.00014895634,0.000014682366,0.000012340832,0.000008841519],"genre_scores_gemma":[0.994607,0.000039604063,0.004004342,0.0006744224,0.0005114703,0.0000031650334,0.000020293599,0.000012912781,0.0001268441],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984591,0.00019037939,0.0007122306,0.00022518207,0.00026509515,0.00014800215],"domain_scores_gemma":[0.99887824,0.0000690631,0.00029723195,0.00017497085,0.00024549573,0.00033497528],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015460801,0.00010649558,0.00022424241,0.00006531049,0.000051988576,0.000022824872,0.00013090107,0.00017717699,0.0000049163746],"category_scores_gemma":[0.0032683674,0.00009357845,0.00014917659,0.00017906049,0.00007899376,0.000016546102,0.00008374576,0.00021578831,0.000014370458],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003451321,0.00008843791,0.047596775,0.00011183021,0.00020900738,0.00005427186,0.00033535104,0.015591068,0.89015776,0.000024294442,0.041719794,0.0037662853],"study_design_scores_gemma":[0.0050305245,0.0036800771,0.1404241,0.0009935658,0.00054925034,0.00018974717,0.0005924633,0.0075913174,0.51234394,0.006940091,0.3206509,0.0010140168],"about_ca_topic_score_codex":0.0000035906628,"about_ca_topic_score_gemma":0.0000015638724,"teacher_disagreement_score":0.37781382,"about_ca_system_score_codex":0.0000055060777,"about_ca_system_score_gemma":0.00015892826,"threshold_uncertainty_score":0.3912777},"labels":[],"label_agreement":null},{"id":"W4376643537","doi":"10.1172/jci167824","title":"Back to the future: evolutionary biology reveals a key regulatory switch in neuroblastoma pathogenesis","year":2023,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Neuroblastoma Research and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Eastern Ontario; University of Ottawa; Izaak Walton Killam Health Centre","funders":"Canadian Institutes of Health Research; Killam Trusts","keywords":"Zebrafish; Neuroblastoma; Biology; Gene; Metastasis; Cancer research; Genetics; Cell culture; Cancer","score_opus":0.08392086371767962,"score_gpt":0.38280903520516374,"score_spread":0.29888817148748414,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4376643537","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3710232,0.00019733985,0.000009598549,0.6266032,0.0015651698,0.0005123403,0.000027765742,0.000013978884,0.00004740627],"genre_scores_gemma":[0.05276978,0.0009119703,0.0028307156,0.89792436,0.03984032,0.00006810049,0.00022681282,0.00020218582,0.00522576],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9944996,0.0015223501,0.002239351,0.00044913677,0.0008396637,0.0004498772],"domain_scores_gemma":[0.9957427,0.001649302,0.0011121978,0.0005614024,0.0004903542,0.00044404456],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.002104699,0.0002998334,0.001046485,0.00058397703,0.000067589506,0.000026767546,0.0003786036,0.0008368321,0.00007688326],"category_scores_gemma":[0.0027496573,0.00019022994,0.00054367183,0.0007920975,0.00024780232,0.00010680736,0.0001248472,0.0028100025,0.00054675975],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043546496,0.00009366002,0.021340704,0.00011528865,0.00016964601,0.0017303248,0.000041006282,0.000011976304,0.0013763683,0.00001571124,0.9726152,0.00205466],"study_design_scores_gemma":[0.002223499,0.003301418,0.6457975,0.0008937899,0.00020651084,0.0006334227,0.000020002904,0.000052720705,0.000103802624,0.003699316,0.34286284,0.00020516901],"about_ca_topic_score_codex":0.000012608192,"about_ca_topic_score_gemma":0.000031638647,"teacher_disagreement_score":0.62975234,"about_ca_system_score_codex":0.00018064404,"about_ca_system_score_gemma":0.00107901,"threshold_uncertainty_score":0.99949056},"labels":[],"label_agreement":null},{"id":"W4377094281","doi":"10.1172/jci149310","title":"Atrx deletion impairs CGAS/STING signaling and increases sarcoma response to radiation and oncolytic herpesvirus","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto; University Health Network","funders":"National Institute of General Medical Sciences; National Cancer Institute; National Institutes of Health","keywords":"ATRX; Oncolytic virus; Cancer research; Biology; Telomere; Cancer; Mutation; Gene; Genetics","score_opus":0.05448702553684602,"score_gpt":0.36080234072865763,"score_spread":0.3063153151918116,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4377094281","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99597347,0.00097470294,0.00013324908,0.0022780667,0.00045852276,0.0001306837,0.0000037713608,0.00003340402,0.000014107255],"genre_scores_gemma":[0.9983095,0.00026154213,0.00037058728,0.0006743876,0.0001378413,0.0000027595336,0.0000089288615,0.000012439006,0.0002219976],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9970318,0.0014788435,0.0010742004,0.00016152738,0.00007054253,0.00018305496],"domain_scores_gemma":[0.9956594,0.003426275,0.00055528485,0.000093049886,0.000161685,0.000104268256],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.005004783,0.00011703019,0.00036113616,0.00030316605,0.00015118431,0.000038645838,0.00008460321,0.00020968237,0.000028516592],"category_scores_gemma":[0.010057387,0.000100438796,0.00009231852,0.00022781605,0.00023901106,0.00022648604,0.000059052316,0.00037766524,0.00006727873],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009443314,0.00007315625,0.037934642,0.00003210467,0.00017126102,0.000029571233,0.0011998754,0.00010218702,0.8703893,0.00011097614,0.0034711896,0.077042446],"study_design_scores_gemma":[0.004733388,0.004915167,0.8660724,0.00067258556,0.00018278556,0.0005612997,0.0015649253,0.0006142102,0.10333993,0.0012884805,0.015719596,0.0003352242],"about_ca_topic_score_codex":0.00004046667,"about_ca_topic_score_gemma":0.000005299642,"teacher_disagreement_score":0.82813776,"about_ca_system_score_codex":0.000040396437,"about_ca_system_score_gemma":0.00017834155,"threshold_uncertainty_score":0.9982813},"labels":[],"label_agreement":null},{"id":"W4378901208","doi":"10.1172/jci170643","title":"Two to tango: endothelial cell TMEM16 scramblases drive coagulation and thrombosis","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Venomous Animal Envenomation and Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Maisonneuve-Rosemont; Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Phospholipid scramblase; Phosphatidylserine; Thrombus; Coagulation; Platelet; Endothelial stem cell; Thrombosis; Fibrin; Immunology; Cell biology; Platelet activation; Biology; Medicine; Internal medicine; Biochemistry; Phospholipid; In vitro","score_opus":0.07921616306726385,"score_gpt":0.3855916389039084,"score_spread":0.30637547583664454,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378901208","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971725,0.00007020994,0.00051012787,0.0014818326,0.00022746732,0.00008370668,0.000008434331,0.0000081100325,0.00043761564],"genre_scores_gemma":[0.9957428,0.00032414048,0.002154378,0.00090615964,0.00061770563,0.0000023448538,0.000014565544,0.000009476024,0.00022844199],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99895453,0.00010203828,0.0005691498,0.00013096895,0.00014787009,0.00009543038],"domain_scores_gemma":[0.9991946,0.000084668376,0.0003205163,0.00007794753,0.00017600306,0.0001462614],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006746067,0.00007774949,0.0002020091,0.00006314196,0.00006974457,0.000024860017,0.00006615933,0.00007325191,0.000006304778],"category_scores_gemma":[0.0007902815,0.00006577022,0.00009151925,0.00011571504,0.000090644324,0.000010273803,0.000052967935,0.00008590057,0.000021319585],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023766761,0.000121356614,0.12904817,0.00003765523,0.00014642302,0.000007789006,0.00050586055,0.0013456015,0.8407372,0.0007797205,0.020127257,0.0069052572],"study_design_scores_gemma":[0.0029687225,0.0029150615,0.8427732,0.00009494733,0.000121967096,0.000021893653,0.0007181873,0.001319237,0.122878954,0.003287236,0.022564711,0.0003358787],"about_ca_topic_score_codex":0.000007289451,"about_ca_topic_score_gemma":0.000015967715,"teacher_disagreement_score":0.7178583,"about_ca_system_score_codex":0.0000065332283,"about_ca_system_score_gemma":0.000063829175,"threshold_uncertainty_score":0.26820317},"labels":[],"label_agreement":null},{"id":"W4380685105","doi":"10.1172/jci168553","title":"Tau pathology in neurodegenerative disease: disease mechanisms and therapeutic avenues","year":2023,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Alzheimer's disease research and treatments","field":"Medicine","cited_by":120,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Boehringer Ingelheim (Canada)","funders":"National Institute of Neurological Disorders and Stroke; National Institute on Aging","keywords":"Disease; Tau pathology; Clinical trial; Tauopathy; Mechanism (biology); Tau protein; Neuroscience; Medicine; Drug development; Neurodegeneration; Bioinformatics; Psychology; Drug; Alzheimer's disease; Biology; Pathology; Psychiatry","score_opus":0.28050285302383055,"score_gpt":0.4913206773068054,"score_spread":0.21081782428297485,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4380685105","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0045739496,0.99356383,0.000018563174,0.0007787678,0.00029667618,0.00068018655,0.00006806405,0.000014517307,0.000005459633],"genre_scores_gemma":[0.002721201,0.9960101,0.00020766238,0.00030371035,0.0005026023,0.00004354898,0.00011311273,0.00005210416,0.000045938188],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9960367,0.001233643,0.0016606622,0.0003363544,0.0004966955,0.00023591077],"domain_scores_gemma":[0.996262,0.0009194404,0.0010178278,0.00024628575,0.00018037428,0.0013740498],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012359772,0.00027335083,0.0016964619,0.0003372575,0.000046468147,0.000031012587,0.00011702345,0.00020226394,0.000014532492],"category_scores_gemma":[0.0021871696,0.00018595911,0.00057615805,0.00030192974,0.00028266935,0.00009256415,0.000059505648,0.00084846484,0.000038827104],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010345115,0.00118541,0.013571894,0.013330088,0.007963517,0.018385729,0.00009037436,0.0000072833677,0.0000014937705,0.0018480817,0.00066452165,0.9419171],"study_design_scores_gemma":[0.01601101,0.0070396545,0.44313776,0.12640883,0.06431859,0.0008249704,0.00009346688,0.0011339231,0.000007059021,0.23663051,0.1025645,0.0018296954],"about_ca_topic_score_codex":0.000001782319,"about_ca_topic_score_gemma":0.0000019186257,"teacher_disagreement_score":0.9400874,"about_ca_system_score_codex":0.000064381304,"about_ca_system_score_gemma":0.0020210927,"threshold_uncertainty_score":0.75831926},"labels":[],"label_agreement":null},{"id":"W4381682806","doi":"10.1172/jci166248","title":"Chemokine receptor CXCR7 activates Aurora Kinase A and promotes neuroendocrine prostate cancer growth","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"National Institutes of Health; National Institute of General Medical Sciences; Northwestern University; National Cancer Institute; Prostate Cancer Foundation","keywords":"Cell biology; Mitosis; Aurora A kinase; Aurora kinase; Biology; Cancer research; Microtubule; Mitotic catastrophe; Kinase; Aurora inhibitor; Signal transduction; Cell cycle; Cell; Genetics","score_opus":0.042031984336666356,"score_gpt":0.3437467991179001,"score_spread":0.30171481478123374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4381682806","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952031,0.00024357408,0.00008167427,0.0038541227,0.00046384044,0.00012166568,0.0000075965672,0.000011601316,0.000012842955],"genre_scores_gemma":[0.99422026,0.0023261358,0.00159101,0.0005070664,0.00094532856,0.000008440953,0.000031141015,0.000023562345,0.00034705317],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986424,0.00013042144,0.00068345823,0.00020345006,0.00017798512,0.00016232135],"domain_scores_gemma":[0.99885863,0.00007667422,0.00052007893,0.000092967806,0.00025422007,0.00019740808],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00071976543,0.00011887651,0.00025126387,0.00006338338,0.000054933324,0.000037476828,0.00010171551,0.00007407236,0.00004342503],"category_scores_gemma":[0.0015060889,0.00009400624,0.00010824648,0.000168814,0.00010103255,0.000019873829,0.00006196242,0.00021843782,0.0000041534736],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001710449,0.00003245198,0.017380344,0.000039413168,0.0000534936,0.000012630629,0.00004357489,0.000030774154,0.9704703,0.000079184014,0.003221552,0.008465217],"study_design_scores_gemma":[0.0009537999,0.0008863056,0.007874401,0.000099880104,0.000033274795,0.00002397847,0.000041141495,0.00038667556,0.981221,0.0027980627,0.005549867,0.000131568],"about_ca_topic_score_codex":0.000009215706,"about_ca_topic_score_gemma":0.000001963216,"teacher_disagreement_score":0.010750725,"about_ca_system_score_codex":0.0000065263785,"about_ca_system_score_gemma":0.00012402062,"threshold_uncertainty_score":0.38334632},"labels":[],"label_agreement":null},{"id":"W4382893715","doi":"10.1172/jci163333","title":"Net39 protects muscle nuclei from mechanical stress during the pathogenesis of Emery-Dreifuss muscular dystrophy","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Nuclear Structure and Function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Heart, Lung, and Blood Institute; University of California, San Diego; National Institutes of Health; University of Texas Southwestern Medical Center; Canadian Institutes of Health Research; Welch Foundation","keywords":"Muscular dystrophy; Skeletal muscle; Biology; Myopathy; Myocyte; Muscle disorder; Emerin; Contractility; Pathology; Cell biology; Genetics; Anatomy; Medicine; Gene; Endocrinology; Internal medicine; Nuclear protein","score_opus":0.02746087857523786,"score_gpt":0.29063404626953565,"score_spread":0.26317316769429777,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382893715","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983916,0.00008363334,0.000339251,0.00040530786,0.0006013446,0.00013058598,0.000021696942,0.00000867481,0.000017905766],"genre_scores_gemma":[0.99723685,0.00016993155,0.0010128286,0.00014018653,0.0013543539,0.0000030408225,0.000028163164,0.000020128695,0.00003454401],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99826866,0.00027042566,0.00085604814,0.0001851686,0.00028968143,0.00013002886],"domain_scores_gemma":[0.99864554,0.00007609449,0.0006964836,0.00027043573,0.00019968027,0.000111787274],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00071110367,0.00010712811,0.00026078435,0.000046582056,0.00007850693,0.000019174193,0.00021568793,0.00022320944,0.000025078956],"category_scores_gemma":[0.0008240156,0.00007374593,0.00028540895,0.00017578152,0.00012056575,0.000012507842,0.00008147283,0.0002535686,0.0000068416307],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017565512,0.00003088935,0.0060104807,0.00002504608,0.0001227452,0.000009762315,0.0000467478,0.00037503472,0.9867468,0.000049098184,0.00043269168,0.0059750625],"study_design_scores_gemma":[0.0010542037,0.0006664716,0.8088603,0.00008424992,0.000111284506,0.0000106332955,0.00016194968,0.00053490716,0.18337137,0.002211244,0.0027911693,0.00014223039],"about_ca_topic_score_codex":0.000020983338,"about_ca_topic_score_gemma":0.000011208555,"teacher_disagreement_score":0.8033754,"about_ca_system_score_codex":0.000007275161,"about_ca_system_score_gemma":0.00007159025,"threshold_uncertainty_score":0.30072716},"labels":[],"label_agreement":null},{"id":"W4382893784","doi":"10.1172/jci171431","title":"Biomarkers in acute kidney injury: On the cusp of a new era?","year":2023,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Nephrotoxicity and Medicinal Plants","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"University of Ottawa","keywords":"Acute kidney injury; Medicine; Biomarker; Etiology; Intensive care medicine; Internal medicine; Creatinine; Kidney disease; Nephrology; Pathology; Bioinformatics; Biology","score_opus":0.14233907859359884,"score_gpt":0.4110829690892371,"score_spread":0.26874389049563824,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382893784","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17972885,0.000023439954,0.000009353888,0.8179909,0.0014884727,0.0004324221,0.000039097762,0.0000107346905,0.00027670304],"genre_scores_gemma":[0.007939178,0.0005884395,0.0006256325,0.98012406,0.008573047,0.000005083206,0.00011155952,0.000048693382,0.001984328],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99554837,0.00046416844,0.0024730735,0.0002137652,0.0010650747,0.0002355315],"domain_scores_gemma":[0.99508566,0.0016871041,0.0022321367,0.00032980987,0.00022110726,0.00044420292],"candidate_categories":["metaresearch","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0036303578,0.00022813362,0.001212275,0.0005049719,0.000024846842,0.000014052638,0.0002850511,0.0008889049,0.00006690042],"category_scores_gemma":[0.011343379,0.00013526315,0.00047330075,0.0005390249,0.0003024368,0.000093276416,0.000033507797,0.004699249,0.000053684562],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010023137,0.000055707198,0.0034374748,0.00015642498,0.00069405924,0.00075726496,0.000100455385,4.683782e-7,0.0008945513,0.000022560951,0.9906209,0.0022577874],"study_design_scores_gemma":[0.0066856844,0.0074380967,0.05034374,0.019445203,0.0021673574,0.0003623736,0.00010326558,0.0001195646,0.0061516105,0.011921324,0.8948635,0.0003983138],"about_ca_topic_score_codex":0.00006677173,"about_ca_topic_score_gemma":0.0000037933396,"teacher_disagreement_score":0.17178968,"about_ca_system_score_codex":0.000070177804,"about_ca_system_score_gemma":0.0021880628,"threshold_uncertainty_score":0.997597},"labels":[],"label_agreement":null},{"id":"W4384627195","doi":"10.1172/jci171554","title":"The latent reservoir of inducible, infectious HIV-1 does not decrease despite decades of antiretroviral therapy","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":132,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Maple Leaf Medical Clinic","funders":"National Institute of General Medical Sciences; Center for AIDS Research, University of Washington; National Institutes of Health; Center for AIDS Research, Johns Hopkins University; Philadelphia Foundation; Bill and Melinda Gates Foundation; Johns Hopkins University; Delaney AIDS Research Enterprise; NIH Office of the Director; U.S. Department of Energy; National Institute of Allergy and Infectious Diseases; Howard Hughes Medical Institute","keywords":"Antiretroviral therapy; Viral replication; Biology; Virology; Human immunodeficiency virus (HIV); DNA replication; Viral load; DNA; Immunology; Virus; Genetics","score_opus":0.09817220153950623,"score_gpt":0.38694240138840014,"score_spread":0.2887701998488939,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4384627195","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967915,0.00063441787,0.000011482424,0.0018695808,0.000455858,0.00014744312,0.000028946193,0.000011920722,0.00004888754],"genre_scores_gemma":[0.99598247,0.0033296347,0.00009052698,0.00008479736,0.00007932324,0.0000043065256,0.000025880641,0.0000085616775,0.0003944958],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997411,0.00082569534,0.0012897602,0.00011977558,0.00014567467,0.00020806324],"domain_scores_gemma":[0.9961811,0.002129108,0.0009825134,0.00021459883,0.000392953,0.00009977602],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0031210606,0.00009860399,0.00039229039,0.00017377383,0.00012418043,0.00001424509,0.00023493916,0.00019839808,0.00003869056],"category_scores_gemma":[0.004350025,0.00004955754,0.00025758764,0.0003209114,0.00073602685,0.00013012136,0.000052090505,0.0004764157,0.000071176364],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012428958,0.00025286587,0.85176265,0.000021744103,0.00060525903,0.000016351014,0.00026118945,0.000043851986,0.12214141,0.0004238482,0.0029957208,0.020232184],"study_design_scores_gemma":[0.003301677,0.0026896582,0.72614783,0.000109525274,0.00004787423,0.000017781567,0.0000942373,0.00001697867,0.26195174,0.0033327392,0.0022223874,0.00006755184],"about_ca_topic_score_codex":0.00008411241,"about_ca_topic_score_gemma":0.000023787352,"teacher_disagreement_score":0.13981032,"about_ca_system_score_codex":0.00001880416,"about_ca_system_score_gemma":0.00036968634,"threshold_uncertainty_score":0.5207701},"labels":[],"label_agreement":null},{"id":"W4384922338","doi":"10.1172/jci164599","title":"Tumors produce glucocorticoids by metabolite recycling, not synthesis, and activate Tregs to promote growth","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Hormonal Regulation and Hypertension","field":"Medicine","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Cancer Institute; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Metabolite; Chemistry; Cancer research; Pharmacology; Biochemistry; Biology","score_opus":0.08880090991125407,"score_gpt":0.37482790206814354,"score_spread":0.2860269921568895,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4384922338","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96845955,0.000117714124,0.00005884324,0.030755099,0.00020331603,0.00026229993,0.0000031832158,0.00003811343,0.00010191441],"genre_scores_gemma":[0.9934439,0.00045580638,0.002821391,0.0020742363,0.00058445404,0.0000061767323,0.000007821032,0.000024331679,0.00058189436],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9975122,0.00017881133,0.0013427922,0.00023764317,0.000550507,0.00017802264],"domain_scores_gemma":[0.9976439,0.00046253958,0.00061285857,0.00015263296,0.0004918424,0.00063622644],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0026285013,0.00013310801,0.00065126567,0.00022197668,0.000064792424,0.000032794516,0.00007144721,0.00012706373,0.000011815403],"category_scores_gemma":[0.01474866,0.00009639027,0.00015449335,0.00045934826,0.00011706391,0.00022677924,0.00003282531,0.0003755939,0.000032963937],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00162292,0.00025151836,0.062270418,0.00012876798,0.00023950181,0.0001454294,0.00046657768,0.000013595188,0.7088179,0.0005435034,0.012933439,0.21256642],"study_design_scores_gemma":[0.0013329412,0.000718316,0.7478764,0.0005019636,0.00028831477,0.00015905182,0.00006377441,0.0011534631,0.22822951,0.0014034028,0.018118626,0.00015424556],"about_ca_topic_score_codex":0.000008614035,"about_ca_topic_score_gemma":8.453406e-7,"teacher_disagreement_score":0.685606,"about_ca_system_score_codex":0.000026169626,"about_ca_system_score_gemma":0.00020548896,"threshold_uncertainty_score":0.99355054},"labels":[],"label_agreement":null},{"id":"W4384926342","doi":"10.1172/jci165370","title":"Cell-free, high-density lipoprotein–specific phospholipid efflux assay predicts incident cardiovascular disease","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Lipoproteins and Cardiovascular Health","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"NIH Clinical Center; Department of Medicine, Georgetown University; National Institutes of Health; NHLBI Division of Intramural Research; McGill University; McGill University Health Centre; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; Hjärt-Lungfonden; Karolinska Institutet; Georgetown University; George Washington University; AstraZeneca","keywords":"Phospholipid; Disease; Cholesterol; Tangier disease; High-density lipoprotein; Lipoprotein; Efflux; Reverse cholesterol transport; Cell; Chemistry; ABCA1; Medicine; Biochemistry; Internal medicine; Membrane","score_opus":0.053473355394074606,"score_gpt":0.31273144003463843,"score_spread":0.2592580846405638,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4384926342","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98785716,0.0035069445,0.0015845167,0.0034468991,0.002441585,0.0008280892,0.000012171023,0.000117043215,0.00020559588],"genre_scores_gemma":[0.9854586,0.0039923466,0.0023189748,0.00091996114,0.0068649515,0.000022106466,0.000053558208,0.000060374714,0.0003091279],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9931599,0.000956333,0.0022479724,0.00047520705,0.0027360031,0.00042461706],"domain_scores_gemma":[0.99455017,0.00037180033,0.00094467617,0.0015666871,0.0009238589,0.0016427861],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.013908844,0.00028121046,0.0014379093,0.00026586873,0.00016235646,0.00006359956,0.00034349094,0.00032254038,0.000059605052],"category_scores_gemma":[0.005858817,0.00022523686,0.0022454888,0.00076182437,0.00026277287,0.00029242306,0.00017063244,0.0011667132,0.00016854472],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0046208138,0.0021572232,0.250556,0.0033977674,0.009402745,0.0071524335,0.0010288749,0.0066271606,0.0025037513,0.0011413522,0.29649037,0.41492152],"study_design_scores_gemma":[0.0071930666,0.0007833671,0.9480981,0.00059704215,0.0014270941,0.00014254716,0.000075884804,0.0005125084,0.004916863,0.0036736657,0.03230335,0.00027647585],"about_ca_topic_score_codex":0.0003301389,"about_ca_topic_score_gemma":0.00000437414,"teacher_disagreement_score":0.69754213,"about_ca_system_score_codex":0.00017736426,"about_ca_system_score_gemma":0.0010762713,"threshold_uncertainty_score":0.9184892},"labels":[],"label_agreement":null},{"id":"W4385232871","doi":"10.1172/jci166275","title":"Loss of Mtm1 causes cholestatic liver disease in a model of X-linked myotubular myopathy","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Genetics and Neurodevelopmental Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Canadian Institutes of Health Research; National Institutes of Health; Astellas Pharma US; Hospital for Sick Children; Astellas Pharma; Audentes Therapeutics","keywords":"Medicine; Pathology","score_opus":0.07087734435940388,"score_gpt":0.33822137069501473,"score_spread":0.26734402633561083,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385232871","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99913585,0.00018786335,0.00025782068,0.00020888346,0.00009809359,0.0000863287,0.000012980855,0.0000017735751,0.00001039063],"genre_scores_gemma":[0.9971521,0.001402047,0.0011408261,0.00020357879,0.000026065907,0.0000019785502,0.00002359704,0.0000115041885,0.000038338596],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99838734,0.0001130013,0.0010497738,0.00013339403,0.0002128992,0.00010361065],"domain_scores_gemma":[0.99892664,0.000056380446,0.0005712739,0.00013397053,0.00017223177,0.00013948619],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006632219,0.00008412389,0.00024771574,0.00010117856,0.000012140376,0.0000043557234,0.00014036147,0.00008632891,0.0000026540997],"category_scores_gemma":[0.001034466,0.00007663823,0.00014016993,0.00016834146,0.00018092009,0.0000073610145,0.000054964024,0.00011916398,0.0000017344955],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003713064,0.00028541498,0.5520209,0.00019103604,0.00006266229,0.000027166368,0.0002739345,0.053410623,0.39161235,0.00009949693,0.0005493291,0.0010957646],"study_design_scores_gemma":[0.0011229524,0.00037925405,0.9465269,0.00012780947,0.00003959908,0.0000017348752,0.0000390402,0.02042637,0.027542347,0.003631379,0.000058373233,0.00010425052],"about_ca_topic_score_codex":0.000006408307,"about_ca_topic_score_gemma":0.000013142164,"teacher_disagreement_score":0.39450598,"about_ca_system_score_codex":0.0000046243126,"about_ca_system_score_gemma":0.00030300414,"threshold_uncertainty_score":0.31252164},"labels":[],"label_agreement":null},{"id":"W4385302461","doi":"10.1172/jci168597","title":"Genetic modification of inflammation- and clonal hematopoiesis–associated cardiovascular risk","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Acute Myeloid Leukemia Research","field":"Medicine","cited_by":75,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"National Human Genome Research Institute; National Institute of Mental Health; National Heart, Lung, and Blood Institute; Ludwig Center at Harvard; Genentech; National Institutes of Health; XBiotech; Burroughs Wellcome Fund; Ludwig Institute for Cancer Research; NIH Office of the Director; Japan Society for the Promotion of Science; Boston Scientific Corporation; Novo Nordisk; Massachusetts General Hospital; Celgene; Eli Lilly and Company; AstraZeneca; Knut och Alice Wallenbergs Stiftelse; Fondation Leducq; National Institute of Diabetes and Digestive and Kidney Diseases; Stanley Center for Psychiatric Research, Broad Institute; Amgen","keywords":"Inflammasome; Biology; Inflammation; AIM2; Gene; Gene expression; Genetics; Haematopoiesis; Immunology; Cancer research; Bioinformatics; Stem cell","score_opus":0.0974407511545383,"score_gpt":0.38314511979098087,"score_spread":0.28570436863644255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385302461","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971965,0.0003275599,0.00050553714,0.0015766689,0.000117566226,0.00019363746,0.000005024726,0.000018894929,0.00005860153],"genre_scores_gemma":[0.9948071,0.0015893048,0.0030314294,0.000045707046,0.00042974265,0.0000037281359,0.00001725171,0.000014769334,0.00006094066],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99695456,0.00045710383,0.00154814,0.0001395572,0.00076817576,0.00013245046],"domain_scores_gemma":[0.9967457,0.0008897346,0.0010640904,0.00021680632,0.000842776,0.00024090434],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.00507421,0.00008696955,0.00059511454,0.00025256118,0.000050533854,0.000014238203,0.000091144546,0.00019258786,0.00001126245],"category_scores_gemma":[0.011700652,0.00007152222,0.00034274114,0.0005130351,0.0002665684,0.00014137328,0.000035697773,0.00050065084,0.0000165807],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003548702,0.00009926351,0.94015616,0.00028780624,0.0019671675,0.000073919386,0.00061153295,0.002767188,0.012774449,0.00036293935,0.0038318934,0.036712818],"study_design_scores_gemma":[0.0022011653,0.00031239237,0.96992296,0.00016934106,0.00043167052,0.00004477334,0.00008859014,0.01834052,0.003498763,0.004565699,0.00036108107,0.0000630164],"about_ca_topic_score_codex":0.000026359357,"about_ca_topic_score_gemma":0.000002126517,"teacher_disagreement_score":0.0366498,"about_ca_system_score_codex":0.00007051974,"about_ca_system_score_gemma":0.00049989746,"threshold_uncertainty_score":0.99662423},"labels":[],"label_agreement":null},{"id":"W4385737830","doi":"10.1172/jci168601","title":"Insulin B peptide-MHC class II-specific chimeric antigen receptor-Tregs prevent autoimmune diabetes in mice","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"Breakthrough T1D Canada; National Institute of Allergy and Infectious Diseases; BC Children's Hospital; University of Minnesota; National Institutes of Health; Leona M. and Harry B. Helmsley Charitable Trust","keywords":"NOD mice; Immunology; Adoptive cell transfer; Nod; Antigen; Insulitis; Biology; T cell; Cancer research; Immune system; Autoimmunity; Endocrinology; Diabetes mellitus","score_opus":0.049638271726872775,"score_gpt":0.3159860001277476,"score_spread":0.2663477284008748,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385737830","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9857669,0.0018085564,0.000015452853,0.0024573558,0.009223658,0.00016322291,0.0000019128108,0.000055263838,0.0005077004],"genre_scores_gemma":[0.99022484,0.0031434894,0.0001321541,0.0004400395,0.00028988504,0.0000070325746,0.00012172344,0.000022482773,0.0056183673],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99630886,0.00085101527,0.0021999974,0.00023864114,0.00010556746,0.0002959019],"domain_scores_gemma":[0.99757665,0.00063840114,0.0013068515,0.00019388257,0.0002290133,0.00005519766],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0026223175,0.00017889598,0.0005781736,0.00039903107,0.0001525487,0.00002574104,0.00024553895,0.00038092906,0.0006404639],"category_scores_gemma":[0.001236371,0.0001561922,0.00030469045,0.0006229593,0.00024388035,0.000422224,0.00008079498,0.0011501785,0.0012806476],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003893992,0.00042990042,0.059687108,0.00002176448,0.00021674957,0.000005231794,0.00065547286,0.00016230495,0.7953921,0.0001363177,0.12774196,0.015161716],"study_design_scores_gemma":[0.0026469426,0.0011835755,0.55267006,0.0003867333,0.00003692153,0.000020893192,0.0004950099,0.00023140282,0.089019336,0.00062747806,0.35242003,0.00026164888],"about_ca_topic_score_codex":0.000018074388,"about_ca_topic_score_gemma":0.0000059527924,"teacher_disagreement_score":0.70637274,"about_ca_system_score_codex":0.00007688304,"about_ca_system_score_gemma":0.00015165833,"threshold_uncertainty_score":0.999497},"labels":[],"label_agreement":null},{"id":"W4385741022","doi":"10.1172/jci169823","title":"Clinical-genomic determinants of immune checkpoint blockade response in head and neck squamous cell carcinoma","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cancer Immunotherapy and Biomarkers","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Dental and Craniofacial Research; National Cancer Institute; Pfizer Canada; Allos Therapeutics; Genentech; National Institutes of Health; Celldex Therapeutics; Astellas Pharma; Eisai; Memorial Sloan-Kettering Cancer Center; Geoffrey Beene Cancer Research Center; Fundación Alfonso Martín Escudero; Pfizer; AstraZeneca; Eli Lilly and Company; Bristol-Myers Squibb; Daiichi Sankyo Europe; U.S. Department of Defense","keywords":"Head and neck squamous-cell carcinoma; Medicine; Blockade; Immune checkpoint; Oncology; Internal medicine; Adverse effect; Head and neck cancer; Head and neck; Disease; Cancer; Surgery; Receptor","score_opus":0.09400576823591318,"score_gpt":0.39880115054653764,"score_spread":0.3047953823106245,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385741022","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99653333,0.00089326204,0.0000024676694,0.0017875906,0.0005302461,0.00020528123,0.0000038427384,0.000009075097,0.000034876935],"genre_scores_gemma":[0.9978117,0.0006830637,0.0007369379,0.00030990178,0.00026654167,0.0000019068817,0.000002697349,0.000018302953,0.00016898365],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9950016,0.00056726066,0.0037904475,0.00018772724,0.00027263185,0.00018032728],"domain_scores_gemma":[0.996283,0.0015048148,0.0015980575,0.00023129827,0.00015874195,0.00022411463],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.008621067,0.00012660521,0.00084751105,0.00027168044,0.000027827873,0.000010548258,0.0001157403,0.00024263939,0.000024923833],"category_scores_gemma":[0.0029730054,0.000102532154,0.00039414922,0.00037058126,0.00038417047,0.00009747327,0.000043537544,0.00053393445,0.0000071753575],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.018706247,0.00020002807,0.86958486,0.000111929796,0.000023515253,0.00012498623,0.00027758107,0.00000677683,0.0997107,5.701936e-7,0.000120890225,0.011131924],"study_design_scores_gemma":[0.009960712,0.0039649284,0.960442,0.0003428192,0.00007658605,0.000080566926,0.0001238335,0.0006584076,0.023722785,0.00018475305,0.0003519749,0.00009061319],"about_ca_topic_score_codex":0.00008534777,"about_ca_topic_score_gemma":0.000023947448,"teacher_disagreement_score":0.09085717,"about_ca_system_score_codex":0.000051531177,"about_ca_system_score_gemma":0.0005868876,"threshold_uncertainty_score":0.41811398},"labels":[],"label_agreement":null},{"id":"W4385741569","doi":"10.1172/jci162120","title":"Specific quinone reductase 2 inhibitors reduce metabolic burden and reverse Alzheimer’s disease phenotype in mice","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Aldose Reductase and Taurine","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital; Western University; University of Windsor","funders":"","keywords":"Hippocampal formation; Cognition; Disease; Oxidative stress; Phenotype; Microinjection; Reductase; Alzheimer's disease; Biology; Neuroscience; Gene; Medicine; Enzyme; Genetics; Cell biology; Biochemistry; Internal medicine","score_opus":0.07181842405704446,"score_gpt":0.358132448356502,"score_spread":0.2863140242994575,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385741569","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98922926,0.0062316107,0.0000052131104,0.003732124,0.0006239547,0.000111789035,0.000009193557,0.0000065150175,0.00005032299],"genre_scores_gemma":[0.9885618,0.0070367306,0.0007171137,0.00022790064,0.0032464147,0.0000027281583,0.00007618242,0.0000184139,0.00011268594],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99822485,0.00022160137,0.0009451007,0.00024287782,0.00020022095,0.00016535663],"domain_scores_gemma":[0.9988238,0.000057166617,0.00046427475,0.00017607374,0.00013191838,0.00034672307],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012291869,0.00012617132,0.0002939778,0.00013018497,0.00003792851,0.000021786187,0.00011724136,0.00013030283,0.000009770815],"category_scores_gemma":[0.00088879676,0.00011253833,0.0001269472,0.00028480683,0.00021201487,0.000024189294,0.00007038924,0.0002560167,0.000017051148],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012667482,0.00021015794,0.031961743,0.000055915494,0.00037051772,0.00034921378,0.00034029657,0.00038628513,0.8480536,0.00043983015,0.0767611,0.039804615],"study_design_scores_gemma":[0.0076059937,0.0011616703,0.36059442,0.00054169504,0.0007835609,0.00018044443,0.0007946528,0.0004152901,0.3486571,0.010773511,0.26746318,0.0010284736],"about_ca_topic_score_codex":0.000015895688,"about_ca_topic_score_gemma":0.000002303869,"teacher_disagreement_score":0.49939647,"about_ca_system_score_codex":0.0000061503915,"about_ca_system_score_gemma":0.00023212217,"threshold_uncertainty_score":0.45891798},"labels":[],"label_agreement":null},{"id":"W4385835251","doi":"10.1172/jci167053","title":"RUNX1 loss renders hematopoietic and leukemic cells dependent on IL-3 and sensitive to JAK inhibition","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Acute Myeloid Leukemia Research","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Stanford Bio-X; Nakayama Foundation for Human Science; Alex's Lemonade Stand Foundation for Childhood Cancer; School of Medicine, Stanford University; American Society of Hematology; Ludwig Center at Harvard; National Institutes of Health; National Science Foundation","keywords":"RUNX1; Haematopoiesis; Cancer research; Biology; Leukemia; Immunology; Stem cell; Cell biology","score_opus":0.07849238685559991,"score_gpt":0.3869725904824171,"score_spread":0.3084802036268172,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385835251","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98385775,0.000018965178,0.00015974711,0.015238318,0.00021670385,0.00027028774,0.0000061864957,0.000023537461,0.00020852243],"genre_scores_gemma":[0.9945361,0.00047309144,0.001032591,0.0031328578,0.0004700613,0.0000028467216,0.00000936337,0.000021167407,0.00032190807],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99771136,0.00025454324,0.0009582849,0.0002466209,0.000613547,0.00021564652],"domain_scores_gemma":[0.9975159,0.001007657,0.00036077556,0.00014611665,0.0003065571,0.0006629781],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0027061803,0.00013088422,0.00045938962,0.0003285944,0.000066815854,0.000037322377,0.00004420778,0.0001884017,0.0000082257],"category_scores_gemma":[0.002388375,0.00010606828,0.0000920053,0.00033561367,0.00027288188,0.00014808416,0.00006947269,0.00078507053,0.000074085714],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0069601713,0.0004605695,0.06287117,0.0010090349,0.00077003165,0.006023655,0.0074047353,0.00097587146,0.75390935,0.0018100672,0.092162065,0.06564326],"study_design_scores_gemma":[0.01748636,0.009586665,0.43345606,0.0036364354,0.0005760289,0.0032806098,0.0036981998,0.006821611,0.5046608,0.014528975,0.0015645932,0.0007036729],"about_ca_topic_score_codex":0.000011630113,"about_ca_topic_score_gemma":0.0000030753752,"teacher_disagreement_score":0.37058488,"about_ca_system_score_codex":0.00018056165,"about_ca_system_score_gemma":0.00037786094,"threshold_uncertainty_score":0.4325339},"labels":[],"label_agreement":null},{"id":"W4385840249","doi":"10.1172/jci167517","title":"Chronic kidney disease promotes atrial fibrillation via inflammasome pathway activation","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Atrial Fibrillation Management and Outcomes","field":"Medicine","cited_by":71,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Heart Institute","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; National Cancer Institute; National Institutes of Health; European Commission; National Human Genome Research Institute; American Heart Association","keywords":"Inflammasome; Atrial fibrillation; Kidney disease; Medicine; Kidney; Internal medicine; Cardiology; Pharmacology; Inflammation","score_opus":0.1299424610619286,"score_gpt":0.3986886791641275,"score_spread":0.2687462181021989,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385840249","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96231276,0.000071702736,0.0010227722,0.03449614,0.0013893862,0.000500383,0.000003050913,0.00009837228,0.00010541563],"genre_scores_gemma":[0.9735731,0.00016856099,0.00076757505,0.00035816536,0.02404408,5.8774896e-7,0.00015925351,0.000025803229,0.00090285926],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997124,0.00021563347,0.0016635944,0.00018076622,0.00064515905,0.00017083492],"domain_scores_gemma":[0.9969632,0.0006376308,0.0012940085,0.00018435832,0.00035638138,0.00056444085],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0020277256,0.00013932225,0.00046854,0.0003236236,0.00008439572,0.000044626435,0.00007454645,0.00014905739,0.00009132428],"category_scores_gemma":[0.009472569,0.000111807974,0.0006002065,0.0006062271,0.0000971481,0.00060255924,0.000038742273,0.0002641151,0.00011724317],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011620452,0.0000053683243,0.91137713,0.0002141899,0.00025265125,0.000029150022,0.00009681809,0.0023922645,0.006839754,0.0008847264,0.0036376226,0.073108256],"study_design_scores_gemma":[0.0041983384,0.0006898273,0.92118466,0.00038427723,0.000298107,0.000005942465,0.000014484834,0.015019089,0.001880307,0.009344896,0.046821892,0.00015820286],"about_ca_topic_score_codex":0.0000024047322,"about_ca_topic_score_gemma":6.825811e-7,"teacher_disagreement_score":0.07295006,"about_ca_system_score_codex":0.000099799385,"about_ca_system_score_gemma":0.0007951846,"threshold_uncertainty_score":0.9988711},"labels":[],"label_agreement":null},{"id":"W4386083973","doi":"10.1172/jci168192","title":"HDAC11 inhibition triggers bimodal thermogenic pathways to circumvent adipocyte catecholamine resistance","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Adipose Tissue and Metabolism","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"NHLBI Division of Intramural Research; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; Canadian Institutes of Health Research; National Institutes of Health; Eikonizo Therapeutics; Italfarmaco; National Jewish Health; American Heart Association","keywords":"Thermogenin; Adipocyte; Cell biology; Biology; Thermogenesis; Signal transduction; Adipose tissue; Endocrinology","score_opus":0.117522494726675,"score_gpt":0.3792125601357577,"score_spread":0.2616900654090827,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386083973","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9892546,0.00050446606,0.00037267583,0.008151638,0.00087410863,0.00030876143,0.000007195854,0.00006255058,0.00046402382],"genre_scores_gemma":[0.99222106,0.00046231327,0.0014839687,0.00233672,0.0017143021,0.000008304632,0.000027610151,0.000031683587,0.0017140552],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9970468,0.00020968018,0.0016683211,0.0002242575,0.00060584926,0.00024504785],"domain_scores_gemma":[0.9976404,0.00029472922,0.0007673281,0.00025454877,0.000428026,0.00061497383],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029162592,0.00014949165,0.0006253512,0.0003386456,0.00006840426,0.000021978538,0.00010438657,0.00020174931,0.000054287117],"category_scores_gemma":[0.00293733,0.00012080382,0.0003339695,0.00079566194,0.0001258032,0.0002223149,0.000028983888,0.0005554329,0.00023083061],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0034327481,0.00063978723,0.01877463,0.00034663823,0.000745363,0.0014820602,0.0029358033,0.000219119,0.78812146,0.0069287657,0.06724355,0.109130085],"study_design_scores_gemma":[0.008544303,0.002174749,0.68684727,0.00150854,0.0009866344,0.00023820596,0.00024199004,0.00022209567,0.13984865,0.020018233,0.13889922,0.00047011688],"about_ca_topic_score_codex":0.000005011714,"about_ca_topic_score_gemma":0.0000062226873,"teacher_disagreement_score":0.66807264,"about_ca_system_score_codex":0.000069575566,"about_ca_system_score_gemma":0.0004282491,"threshold_uncertainty_score":0.4926237},"labels":[],"label_agreement":null},{"id":"W4386117018","doi":"10.1172/jci170341","title":"Endogenous adenine mediates kidney injury in diabetic models and predicts diabetic kidney disease in patients","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Chronic Kidney Disease and Diabetes","field":"Medicine","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"National Institute on Minority Health and Health Disparities; National Center for Advancing Translational Sciences; National Institute of General Medical Sciences; National Heart, Lung, and Blood Institute; National Center for Research Resources; National Institute of Allergy and Infectious Diseases; Clinical and Translational Science Collaborative of Cleveland, School of Medicine, Case Western Reserve University; University of Texas Health Science Center at San Antonio; Perelman School of Medicine, University of Pennsylvania; Centers for Disease Control and Prevention; National Institutes of Health; George Institute for Global Health; Idorsia Pharmaceuticals; University of Pennsylvania; Novo Nordisk; Bristol-Myers Squibb; Cleveland Clinic; Rijksuniversiteit Groningen; Maze Therapeutics; University of California, San Francisco; Horizon Pharma; Deutsches Krebsforschungszentrum; Johns Hopkins University; Eidgenössische Technische Hochschule Zürich; National University of Singapore; Lee Kong Chian School of Medicine, Nanyang Technological University; Michigan Institute for Clinical and Health Research; Eli Lilly and Company; Kaiser Permanente; Georgia Clinical and Translational Science Alliance; Gilead Sciences; Boettcher Foundation; Pacific Northwest National Laboratory; Universitair Medisch Centrum Groningen; University of Colorado School of Medicine, Anschutz Medical Campus; University of Illinois at Urbana-Champaign; European Molecular Biology Laboratory; CSL Behring; AstraZeneca; National Institute of Diabetes and Digestive and Kidney Diseases; Sanofi; American Heart Association; American Diabetes Association","keywords":"Medicine; Kidney disease; Albuminuria; Diabetes mellitus; Diabetic nephropathy; Kidney; Internal medicine; Endocrinology; Renal function; Biomarker; Microalbuminuria; PI3K/AKT/mTOR pathway; Biology; Apoptosis","score_opus":0.06025230152040864,"score_gpt":0.32870586562594956,"score_spread":0.2684535641055409,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386117018","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934248,0.00033364893,0.0000024295646,0.005246998,0.00043156862,0.00039596792,0.00007071424,0.00002994125,0.00006393713],"genre_scores_gemma":[0.9946849,0.00073801324,0.000117144606,0.003789151,0.00040590885,0.000016531034,0.00019182272,0.000029132925,0.00002741436],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9966396,0.0002776354,0.0018126011,0.00028445435,0.0006161522,0.00036953838],"domain_scores_gemma":[0.99562204,0.00052115234,0.0005382175,0.00022414813,0.00021105469,0.0028834073],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0014472066,0.0001973166,0.0007407465,0.000523876,0.00003207029,0.000027377513,0.00012341524,0.00017498204,0.00003466721],"category_scores_gemma":[0.017288191,0.00016657202,0.00016911025,0.0006178193,0.0002129655,0.0004156182,0.000076305085,0.00055681093,0.000017896476],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004429467,0.00046417527,0.99017066,0.00029963962,0.000047559573,0.00009404679,0.00020267916,0.00010385058,0.00032211238,0.000028524884,0.0062145125,0.0016092705],"study_design_scores_gemma":[0.008520586,0.0008071723,0.96262866,0.0016075508,0.00022833924,0.0000016020659,0.000018131565,0.013462719,0.00031772337,0.012100649,0.00014925245,0.00015763706],"about_ca_topic_score_codex":0.000012781899,"about_ca_topic_score_gemma":0.0000011075994,"teacher_disagreement_score":0.027542045,"about_ca_system_score_codex":0.00009708664,"about_ca_system_score_gemma":0.0016835909,"threshold_uncertainty_score":0.9909896},"labels":[],"label_agreement":null},{"id":"W4386117213","doi":"10.1172/jci166644","title":"Peroxisome disruption alters lipid metabolism and potentiates antitumor response with MAPK-targeted therapy in melanoma","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune cells in cancer","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; McGill University Health Centre; Jewish General Hospital; McGill University","funders":"Canadian Institutes of Health Research; McGill University; Massachusetts General Hospital","keywords":"Biology; Melanoma; Cancer research; Lipid metabolism; Biogenesis; Peroxisome; Cell biology; Biochemistry; Gene","score_opus":0.04409990182193112,"score_gpt":0.33180167152671497,"score_spread":0.28770176970478384,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386117213","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935504,0.0024668453,0.00002309371,0.002362692,0.0014269954,0.0001342437,0.0000040118775,0.000022637105,0.000009054082],"genre_scores_gemma":[0.9969637,0.0018297324,0.0003729819,0.0004019405,0.0001297832,0.000004575601,0.000020054315,0.000017063563,0.00026019532],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9975492,0.0009891327,0.0009981138,0.00017925094,0.00008072047,0.0002035835],"domain_scores_gemma":[0.9982524,0.0007495026,0.0006737011,0.00014160061,0.00013807122,0.000044721262],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003104734,0.00013130107,0.00044819337,0.00028979985,0.00006774259,0.000023224547,0.00013797436,0.0002066092,0.00005491779],"category_scores_gemma":[0.0008011356,0.00009355786,0.00009611423,0.00032161627,0.00041934408,0.00029058292,0.000030864267,0.0005515112,0.000046771613],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.01104996,0.00012813167,0.24645707,0.000021731585,0.00030149493,0.000050396215,0.0011962441,0.00012949806,0.72874486,0.000130684,0.0016039582,0.01018599],"study_design_scores_gemma":[0.0038042073,0.00087447127,0.93612885,0.00011281057,0.00003746634,0.00009056015,0.00022127024,0.000035717465,0.054574944,0.0006092485,0.0033882463,0.00012219646],"about_ca_topic_score_codex":0.000014500894,"about_ca_topic_score_gemma":0.000006112517,"teacher_disagreement_score":0.6896718,"about_ca_system_score_codex":0.000023341167,"about_ca_system_score_gemma":0.00015504353,"threshold_uncertainty_score":0.3815179},"labels":[],"label_agreement":null},{"id":"W4386325060","doi":"10.1172/jci171723","title":"Effects of AFQ056 on language learning in fragile X syndrome","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Genetics and Neurodevelopmental Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; Shionogi; Azrieli Foundation; Zynerba Pharmaceuticals; Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Fragile X Foundation; Biogen; National Institute of Neurological Disorders and Stroke; Massachusetts General Hospital; China Scholarship Council; Novartis; University of California, Davis; F. Hoffmann-La Roche; FRAXA Research Foundation; Ultragenyx Pharmaceutical; Autism Speaks","keywords":"Fragile X syndrome; Computer science; Medicine; Biology; Genetics","score_opus":0.024224364192408615,"score_gpt":0.33062507154164256,"score_spread":0.30640070734923397,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386325060","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99932694,0.00009859099,0.000017482158,0.00022182935,0.00019780175,0.00005587038,4.901539e-7,0.0000028619531,0.00007813726],"genre_scores_gemma":[0.9991225,0.00027658028,0.00019037817,0.00022151115,0.000030446316,0.0000013117723,0.0000094859215,0.0000085861575,0.00013918814],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99903905,0.00013421482,0.0005106885,0.00009580044,0.00013794522,0.00008232667],"domain_scores_gemma":[0.9994314,0.00012131505,0.00028974182,0.000057754118,0.000039356164,0.00006046063],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005735324,0.000057051646,0.00016345883,0.00008336643,0.0000126948025,0.0000044659596,0.00008376128,0.00008993975,0.0000030178403],"category_scores_gemma":[0.0012829493,0.000050654657,0.000083775834,0.00014446779,0.00005175386,0.0000028638688,0.000030228995,0.00018106739,0.000007732816],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000099012876,0.00010535994,0.06948188,0.00007278624,0.00003582865,0.000068291636,0.00018727162,0.0030851113,0.92057997,0.000023251068,0.0010616324,0.0051996205],"study_design_scores_gemma":[0.00084731646,0.0011476388,0.8362175,0.00010321217,0.00000840432,0.00000635543,0.00007492558,0.00014645988,0.160613,0.00025486865,0.0005152053,0.00006510603],"about_ca_topic_score_codex":0.0000021291698,"about_ca_topic_score_gemma":0.0000024890405,"teacher_disagreement_score":0.7667356,"about_ca_system_score_codex":0.0000034129237,"about_ca_system_score_gemma":0.00006376044,"threshold_uncertainty_score":0.2065637},"labels":[],"label_agreement":null},{"id":"W4386525605","doi":"10.1172/jci170420","title":"Multiscale genetic architecture of donor-recipient differences reveals intronic LIMS1 mismatches associated with kidney transplant survival","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Renal Transplantation Outcomes and Treatments","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Allergy and Infectious Diseases; Natera; National Center for Advancing Translational Sciences; CSL Behring; National Institutes of Health; Alexion Pharmaceuticals","keywords":"Biology; Expression quantitative trait loci; Human leukocyte antigen; Single-nucleotide polymorphism; Haplotype; Genome-wide association study; Genetics; Allele; Locus (genetics); SNP; Gene; Genotype; Antigen","score_opus":0.0813089496246744,"score_gpt":0.35245922644358246,"score_spread":0.2711502768189081,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386525605","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962829,0.0000613639,0.0005354839,0.0024812846,0.00031634752,0.00020555219,0.00004776144,0.000019980534,0.00004932246],"genre_scores_gemma":[0.9966292,0.00049655675,0.0021108494,0.0002460855,0.00016577878,0.0000037207376,0.000084392486,0.00001544323,0.00024796653],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99740016,0.00028726447,0.0014081143,0.0001576534,0.00056857837,0.00017821495],"domain_scores_gemma":[0.99723154,0.001062479,0.00095701515,0.00012236879,0.00022754156,0.00039905304],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008504249,0.00015252236,0.00078207697,0.0001545159,0.000039118804,0.000013040901,0.00009946913,0.00014106788,0.000026175987],"category_scores_gemma":[0.00069906854,0.00009124406,0.00026560904,0.00030958475,0.00019104751,0.0000622594,0.000006242399,0.0003680068,0.0000063141615],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006778062,0.00022418589,0.99350613,0.0001805015,0.0006478709,0.00010431878,0.0006370942,0.00028143596,0.0015889273,0.000024730654,0.00008473223,0.0020422824],"study_design_scores_gemma":[0.0047733127,0.0015994976,0.9878522,0.0024715904,0.00060781586,0.000054487165,0.00005589368,0.00030040133,0.0011732515,0.000994461,0.000028189279,0.000088877416],"about_ca_topic_score_codex":0.000017785771,"about_ca_topic_score_gemma":0.000027068838,"teacher_disagreement_score":0.005653892,"about_ca_system_score_codex":0.000029282935,"about_ca_system_score_gemma":0.0002717722,"threshold_uncertainty_score":0.37208247},"labels":[],"label_agreement":null},{"id":"W4387033134","doi":"10.1172/jci169200","title":"The catalytic subunit of DNA-PK regulates transcription and splicing of AR in advanced prostate cancer","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; Genentech; Sierra Oncology; Astellas Pharma; Eisai; Newcastle University; Prostate Cancer UK; National Institute for Health and Care Research; Wellcome Trust; JGW Patterson Foundation; Prostate Cancer Foundation; Movember Foundation; AstraZeneca; Pfizer; Amgen; Sanofi; Cancer Research UK; Vertex Pharmaceuticals","keywords":"Prostate cancer; Androgen receptor; RNA splicing; Signalling; Cancer research; Protein subunit; Alternative splicing; Function (biology); Prostate; Receptor; Medicine; Cancer; Cell biology; Chemistry; Biology; Computational biology; Internal medicine; Genetics; Gene isoform; Gene","score_opus":0.10274179390173648,"score_gpt":0.42657928142334484,"score_spread":0.32383748752160835,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387033134","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99209666,0.0010790701,0.000001861528,0.0064073806,0.00013985191,0.0002376609,0.0000043934915,0.0000041719363,0.000028918774],"genre_scores_gemma":[0.99036735,0.0090324115,0.00009696687,0.000037642538,0.00007462699,0.000005513378,0.00000779036,0.000007882295,0.00036981786],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984201,0.0000992897,0.0009930141,0.00008595412,0.00028227936,0.00011935598],"domain_scores_gemma":[0.9985642,0.00045379292,0.0005135063,0.000092507355,0.00027418789,0.00010181899],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017042629,0.00006247091,0.00033687122,0.00013755867,0.000031827803,0.0000067267915,0.000051723528,0.000060108894,0.0000028941258],"category_scores_gemma":[0.00056124973,0.000037169804,0.00007973178,0.00037667408,0.00032549925,0.00013615093,0.000011236886,0.0002429987,5.626706e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002978436,0.00011570378,0.60547,0.00056540477,0.00018189315,0.000030071407,0.0024638078,0.00057809724,0.32035217,0.00013333972,0.000310574,0.066820495],"study_design_scores_gemma":[0.004416373,0.0009928943,0.8394975,0.0014500003,0.00011587164,0.000009915419,0.00059412414,0.0018589677,0.14688863,0.0038571926,0.00026505537,0.00005347195],"about_ca_topic_score_codex":0.000061780906,"about_ca_topic_score_gemma":0.000064641914,"teacher_disagreement_score":0.2340275,"about_ca_system_score_codex":0.00003758967,"about_ca_system_score_gemma":0.00028322198,"threshold_uncertainty_score":0.15157406},"labels":[],"label_agreement":null},{"id":"W4387033187","doi":"10.1172/jci173495","title":"Glucagon-like peptide-1 receptor blockade impairs islet secretion and glucose metabolism in humans","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's & Women's Health Centre of British Columbia","funders":"National Institutes of Health; Ministero dell’Istruzione, dell’Università e della Ricerca; National Institute of Diabetes and Digestive and Kidney Diseases; Novo Nordisk; National Center for Advancing Translational Sciences; Dipartimenti di Eccellenza","keywords":"Internal medicine; Endocrinology; Islet; Glucagon; Proglucagon; Glucagon-like peptide-1; Insulin; Type 2 diabetes; Carbohydrate metabolism; Diabetes mellitus; Glucose clamp technique; Endogeny; Blockade; Biology; Blood sugar regulation; Pancreatic hormone; Receptor; Medicine; Insulin resistance","score_opus":0.0639552403383433,"score_gpt":0.3571097830082488,"score_spread":0.2931545426699055,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387033187","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99286556,0.0003755195,0.000034746055,0.005208973,0.0009964752,0.00015444294,0.0000030464075,0.000037757294,0.0003234607],"genre_scores_gemma":[0.99283934,0.0013444339,0.0018385348,0.001912244,0.0012916834,0.0000055005235,0.000036770965,0.000019398156,0.0007120841],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99763733,0.00025146562,0.0013849502,0.000177624,0.00036829614,0.00018032396],"domain_scores_gemma":[0.99806374,0.00065117865,0.00057773996,0.00014080408,0.00020565045,0.00036090304],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0028623093,0.00012394178,0.0005929524,0.00033095406,0.000044898676,0.000025987027,0.00005763427,0.00018986152,0.00011260913],"category_scores_gemma":[0.0042652297,0.00009826407,0.00017510442,0.00046876827,0.00018496256,0.0002290126,0.000024657833,0.0005102771,0.00006415365],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011552672,0.0004020917,0.76980376,0.00025248952,0.00031683274,0.00009105941,0.0017521672,0.00011529939,0.14978027,0.0008119756,0.06238021,0.013138596],"study_design_scores_gemma":[0.0055987868,0.00082213804,0.95490855,0.0005074699,0.0002578741,0.00003164455,0.00057106605,0.002301444,0.0077435584,0.0043421714,0.022753717,0.00016159653],"about_ca_topic_score_codex":0.000015945823,"about_ca_topic_score_gemma":0.0000037652194,"teacher_disagreement_score":0.18510479,"about_ca_system_score_codex":0.000034757242,"about_ca_system_score_gemma":0.0002052312,"threshold_uncertainty_score":0.5106186},"labels":[],"label_agreement":null},{"id":"W4387653137","doi":"10.1172/jci174319","title":"Chemical carcinogens: implications for cancer treatment","year":2023,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Immune cells in cancer","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Princess Margaret Cancer Centre; University Health Network","funders":"Canadian Institutes of Health Research; Cancer Research Institute","keywords":"Carcinogen; Immunogenicity; Cancer; Tumor microenvironment; Cancer research; Immune system; Reprogramming; Immunotherapy; Cancer immunotherapy; Lung cancer; Immunology; Carcinogenesis; Biology; Medicine; Cell; Oncology; Genetics","score_opus":0.18491450813477303,"score_gpt":0.41939149949033266,"score_spread":0.23447699135555963,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387653137","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.03408652,0.005955664,0.00013329647,0.94432354,0.014211762,0.00070504966,0.00044349942,0.000057716636,0.00008293264],"genre_scores_gemma":[0.010701424,0.01133727,0.0034151203,0.88400507,0.044040915,0.0009783219,0.0040640472,0.00043866129,0.041019168],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9968457,0.0003062147,0.0021141896,0.0003236928,0.000068726345,0.0003414548],"domain_scores_gemma":[0.99419117,0.002638451,0.0021237954,0.0003722581,0.0006318921,0.00004244413],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0008192925,0.00027769766,0.0010220499,0.0001592589,0.00009364315,0.000020295778,0.0003988159,0.0018397172,0.00010961071],"category_scores_gemma":[0.0011981255,0.00021875284,0.0008405857,0.00014500058,0.00045983854,0.00007789704,0.00004009823,0.0017235605,0.00012266329],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007247041,0.000038748156,0.0021834516,0.000055656434,0.0007943813,0.000005677082,0.00006808746,0.000007648747,0.017338797,0.000028062621,0.9686441,0.010762924],"study_design_scores_gemma":[0.001697883,0.00038848777,0.0027040807,0.00020263181,0.0007207032,0.00004657267,0.000008760854,0.0000023389555,0.019338865,0.002898905,0.97177285,0.00021790864],"about_ca_topic_score_codex":0.000052195865,"about_ca_topic_score_gemma":0.000008324054,"teacher_disagreement_score":0.060318485,"about_ca_system_score_codex":0.00030863745,"about_ca_system_score_gemma":0.001084208,"threshold_uncertainty_score":0.9994561},"labels":[],"label_agreement":null},{"id":"W4388041029","doi":"10.1172/jci166884","title":"Human intestinal organoids from Cronkhite-Canada syndrome patients reveal link between serotonin and proliferation","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Genetic factors in colorectal cancer","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Allergy and Infectious Diseases; National Center for Research Resources; National Chemical Laboratory; National Cancer Institute; National Institutes of Health; Alkek Center for Metagenomics and Microbiome Research, Baylor College of Medicine; John S. Dunn Gulf Coast Consortium for Chemical Genomics; National Institute of Environmental Health Sciences; Leona M. and Harry B. Helmsley Charitable Trust; Cancer Prevention and Research Institute of Texas","keywords":"Organoid; Enteroendocrine cell; Biology; Pathogenesis; Stem cell; Cell growth; Etiology; Disease; Bioinformatics; Cancer research; Medicine; Pathology; Cell biology; Endocrine system; Endocrinology; Hormone; Immunology; Genetics","score_opus":0.07566925136771158,"score_gpt":0.35942408292581357,"score_spread":0.283754831558102,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388041029","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99532473,0.000024019568,0.000018507142,0.003703223,0.00056822516,0.00029873016,0.00001397883,0.000020857928,0.000027740862],"genre_scores_gemma":[0.9957417,0.000009417337,0.0021920085,0.0006024894,0.0012135414,0.0000049563446,0.00009057783,0.000021484315,0.00012381023],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99735415,0.00019649317,0.0014512109,0.00020389145,0.0006344708,0.00015975897],"domain_scores_gemma":[0.9976672,0.0005273814,0.0007695606,0.00014349296,0.0005000024,0.00039236987],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000981217,0.00013571713,0.0005157853,0.00010409475,0.00007967199,0.000030856943,0.000099496894,0.00017758894,0.000058638827],"category_scores_gemma":[0.003423232,0.00011419064,0.00007467303,0.0002677704,0.00015268968,0.00012624222,0.000051929324,0.000641959,0.0000086620585],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056490546,0.000017586222,0.9901674,0.00003771918,0.000059488266,0.00003110903,0.00008861918,0.000011541025,0.0018042984,0.00000253779,0.0030662832,0.0046569216],"study_design_scores_gemma":[0.0017507832,0.0016407463,0.99184275,0.0003346898,0.00014086206,0.000025459505,0.000023502063,0.00018655944,0.002202956,0.0014118543,0.00033795848,0.00010186664],"about_ca_topic_score_codex":0.0016228341,"about_ca_topic_score_gemma":0.0016170372,"teacher_disagreement_score":0.004555055,"about_ca_system_score_codex":0.00013844908,"about_ca_system_score_gemma":0.00088079466,"threshold_uncertainty_score":0.46565592},"labels":[],"label_agreement":null},{"id":"W4388042143","doi":"10.1172/jci157165","title":"Single-cell transcriptomics and chromatin accessibility profiling elucidate the kidney-protective mechanism of mineralocorticoid receptor antagonists","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Hormonal Regulation and Hypertension","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Nutrition, Metabolism and Diabetes","funders":"Perelman School of Medicine, University of Pennsylvania; National Institutes of Health; OeAD-GmbH; Medizinische Universität Graz; National Institute of Diabetes and Digestive and Kidney Diseases; Karl-Franzens-Universität Graz; Deutsche Forschungsgemeinschaft; University of Pennsylvania","keywords":"Mineralocorticoid receptor; Endocrinology; Epithelial sodium channel; Internal medicine; Mineralocorticoid; Kidney; Albuminuria; Aldosterone; Kidney disease; Distal convoluted tubule; Biology; Medicine; Chemistry; Reabsorption; Sodium","score_opus":0.10269165817528444,"score_gpt":0.35746890793722147,"score_spread":0.25477724976193705,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388042143","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9897455,0.00006196553,0.0007361424,0.008716119,0.00028764078,0.0003605967,0.0000059394406,0.000018011897,0.00006810012],"genre_scores_gemma":[0.99336725,0.00012474252,0.005335547,0.00080845994,0.00026421802,0.0000029730118,0.000014096151,0.000013277046,0.00006943673],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976687,0.0002483879,0.0014089824,0.00015528662,0.00040359964,0.00011503768],"domain_scores_gemma":[0.9977584,0.00035129997,0.00096297706,0.00015541413,0.0004955732,0.00027635644],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025448527,0.0001039392,0.00047463176,0.0001003918,0.000069451395,0.000022034836,0.00008398515,0.00014405676,0.000015103734],"category_scores_gemma":[0.003556877,0.0000639124,0.000171096,0.00028798476,0.00025793948,0.00017508786,0.000023851693,0.00038127817,0.000004445643],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041266778,0.00011536608,0.0056520808,0.00011258012,0.000045040902,0.000008634943,0.00027328893,0.000006200103,0.9858504,0.0003445973,0.00042747072,0.0067517073],"study_design_scores_gemma":[0.0038109373,0.0016905967,0.17248836,0.00050556083,0.00029940924,0.0000883397,0.00036613934,0.019056864,0.7874633,0.013314399,0.0007746669,0.00014140384],"about_ca_topic_score_codex":0.0000065078607,"about_ca_topic_score_gemma":0.0000013008929,"teacher_disagreement_score":0.19838704,"about_ca_system_score_codex":0.000031157753,"about_ca_system_score_gemma":0.00034411845,"threshold_uncertainty_score":0.42581707},"labels":[],"label_agreement":null},{"id":"W4388048581","doi":"10.1172/jci166740","title":"Breast cancer immunopeptidomes contain numerous shared tumor antigens","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immunotherapy and Immune Responses","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer","funders":"Canadian Cancer Society","keywords":"Breast cancer; Immunogenicity; Triple-negative breast cancer; Cancer immunotherapy; Antigen; Immunotherapy; Cancer research; Cancer; Immune checkpoint; Blockade; Biology; Oncology; Medicine; Immunology; Internal medicine; Receptor","score_opus":0.05626000602586655,"score_gpt":0.36244685979737995,"score_spread":0.3061868537715134,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388048581","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98930234,0.0041919597,0.000027865528,0.0032333804,0.0029411612,0.00013541353,0.000051771836,0.000059191752,0.00005692599],"genre_scores_gemma":[0.99379295,0.0021365436,0.00008987973,0.0009600967,0.00028193212,0.000007741986,0.000039623785,0.000026888147,0.0026643227],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.997126,0.0006431346,0.0016531653,0.00017282185,0.000095877636,0.00030899746],"domain_scores_gemma":[0.99731594,0.00094708207,0.0011652268,0.00021727492,0.0003023114,0.000052184103],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024018933,0.00017130197,0.0006364913,0.00022193839,0.00017646968,0.000035390574,0.0003281821,0.00023798713,0.0007932166],"category_scores_gemma":[0.00071600423,0.00013305008,0.0003623407,0.00038197957,0.000421849,0.0003366118,0.000049800536,0.000676337,0.00055170996],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005045871,0.0002703052,0.1290028,0.000042149502,0.0015632731,0.000097437674,0.0011508858,0.00007399607,0.75208193,0.0005813177,0.054164965,0.055925086],"study_design_scores_gemma":[0.0056307996,0.0007940068,0.90109146,0.0004629136,0.00013590089,0.0010538645,0.00049417035,0.000032318243,0.047987226,0.0016150121,0.040370118,0.0003322119],"about_ca_topic_score_codex":0.00008639513,"about_ca_topic_score_gemma":0.0000058737455,"teacher_disagreement_score":0.77208865,"about_ca_system_score_codex":0.000037897567,"about_ca_system_score_gemma":0.00046330938,"threshold_uncertainty_score":0.8685165},"labels":[],"label_agreement":null},{"id":"W4388654287","doi":"10.1172/jci171235","title":"Spliceosome malfunction causes neurodevelopmental disorders with overlapping features","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; Centre Hospitalier Universitaire Sainte-Justine; London Health Sciences Centre; McMaster University; McMaster Children's Hospital; SickKids Foundation; University of Toronto; University Health Network; Children's Hospital of Eastern Ontario; University of Ottawa","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Neurological Disorders and Stroke; NIH Office of the Director; National Human Genome Research Institute; National Institutes of Health; Novo Nordisk Fonden; Eagles Autism Foundation; Common Fund; Wellcome Trust; University of Rochester; Pennsylvania Department of Health","keywords":"Medicine; Spliceosome; Genetics; Bioinformatics; Biology; RNA splicing; RNA","score_opus":0.04362714930798609,"score_gpt":0.34867146070193994,"score_spread":0.3050443113939538,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388654287","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980361,0.000053959473,0.00025869635,0.0011922711,0.000254556,0.0000705481,0.0000011996747,0.000008888104,0.0001238024],"genre_scores_gemma":[0.9967561,0.00047392907,0.00076980924,0.0004489501,0.00048387825,0.0000024122344,0.0000276812,0.0000137796105,0.0010234608],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99866796,0.00010361401,0.00066111924,0.00014387003,0.00027129284,0.00015212894],"domain_scores_gemma":[0.9989549,0.000070901355,0.0005952657,0.00009906039,0.00012279293,0.00015708226],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010089217,0.00008106826,0.00016993388,0.0000839578,0.000069883594,0.000032964133,0.00010445275,0.000092884264,0.0000050135022],"category_scores_gemma":[0.0013868853,0.00005963533,0.00009699572,0.00019624237,0.00010677032,0.000018497456,0.000038647693,0.00023899358,0.000008463111],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005843698,0.000051656825,0.45753732,0.000034744375,0.00015114051,0.000022985481,0.00005084255,0.0009931333,0.5147346,0.00007943742,0.013866179,0.01189357],"study_design_scores_gemma":[0.00084356987,0.0009448179,0.98237485,0.000059926886,0.000016075048,0.0000410435,0.00011610053,0.00016688593,0.010451578,0.0002830898,0.004596863,0.00010518076],"about_ca_topic_score_codex":0.0000092473,"about_ca_topic_score_gemma":0.000044208697,"teacher_disagreement_score":0.52483755,"about_ca_system_score_codex":0.000008591061,"about_ca_system_score_gemma":0.00019553317,"threshold_uncertainty_score":0.24318583},"labels":[],"label_agreement":null},{"id":"W4388859922","doi":"10.1172/jci173299","title":"AEP-cleaved DDX3X induces alternative RNA splicing events to mediate cancer cell adaptation in harsh microenvironments","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pancreas Centre (Canada)","funders":"National Natural Science Foundation of China; Shanghai Association for Science and Technology","keywords":"Alternative splicing; RNA splicing; Exon; Biology; RNA-binding protein; Cancer cell; Gene isoform; Frameshift mutation; Cell biology; Cancer research; RNA; Chemistry; Cancer; Gene; Biochemistry; Genetics","score_opus":0.09944095742426691,"score_gpt":0.38665435179305485,"score_spread":0.28721339436878796,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388859922","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99775743,0.0001867981,0.00039830842,0.00091340585,0.0005353151,0.00013442495,0.000009388255,0.00000311737,0.00006180907],"genre_scores_gemma":[0.99556947,0.002219435,0.00068736053,0.0006681219,0.0005439247,0.00001685133,0.000027922133,0.000014764359,0.00025215078],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984205,0.0001599717,0.00085216033,0.0001970973,0.00022798461,0.00014228153],"domain_scores_gemma":[0.9989584,0.000047131183,0.00060984894,0.00012808286,0.00010176847,0.00015476381],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009504337,0.00009467555,0.00019570875,0.00008081217,0.000036160298,0.0000147500705,0.00017105795,0.00011435163,0.000021200507],"category_scores_gemma":[0.00029861738,0.00008709088,0.00008967091,0.0001709878,0.000042066637,0.000021301876,0.000045073015,0.00016559874,0.0000205932],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010291103,0.00007263062,0.04195897,0.000012528762,0.000051022816,0.0000040088207,0.0004769238,0.015577844,0.9216654,0.000008502496,0.0019768004,0.018092504],"study_design_scores_gemma":[0.0018747261,0.0004856695,0.5825044,0.0001903113,0.000044756456,0.0000020714604,0.00043528684,0.0022440602,0.40830642,0.0007927953,0.0028901543,0.00022936257],"about_ca_topic_score_codex":0.00013139175,"about_ca_topic_score_gemma":0.00014029258,"teacher_disagreement_score":0.5405454,"about_ca_system_score_codex":0.00005623827,"about_ca_system_score_gemma":0.00014219152,"threshold_uncertainty_score":0.3551463},"labels":[],"label_agreement":null},{"id":"W4389166145","doi":"10.1172/jci175288","title":"Human brown adipose tissue is not enough to combat cardiometabolic diseases","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Adipose Tissue and Metabolism","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire de Sherbrooke","funders":"Canadian Institutes of Health Research; Université de Sherbrooke; GlaxoSmithKline","keywords":"Adipose tissue; Brown adipose tissue; Medicine; Bioinformatics; Physiology; Biology; Endocrinology","score_opus":0.1254477990649705,"score_gpt":0.4312979823160772,"score_spread":0.3058501832511067,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389166145","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9777487,0.0009427295,0.000048367474,0.019325208,0.0012192178,0.00029234387,0.000021202815,0.00006407114,0.00033819457],"genre_scores_gemma":[0.97965115,0.0003331101,0.0012000703,0.009810115,0.004254468,0.000006166305,0.00002768032,0.000038485658,0.004678723],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99692094,0.00021376633,0.0016180882,0.00023846848,0.0007328264,0.00027592882],"domain_scores_gemma":[0.99719316,0.00027440453,0.00060918374,0.0003449171,0.00046375958,0.0011145573],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013830779,0.00017611783,0.0010390589,0.00041248766,0.0001019356,0.000036780817,0.00018463652,0.00017751074,0.00015320521],"category_scores_gemma":[0.0026189124,0.00014179347,0.00038601356,0.0008341787,0.00016975617,0.00023992878,0.000064473104,0.00047767573,0.0005120271],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00075843185,0.0007139791,0.095876984,0.00030360784,0.001523633,0.00095193845,0.002936337,0.0001434233,0.10241527,0.0046988786,0.52302015,0.26665738],"study_design_scores_gemma":[0.0018719359,0.00082139944,0.6560987,0.00018514598,0.0009202727,0.000067501125,0.000056177872,0.000024154897,0.010316749,0.0013767484,0.32811227,0.00014890719],"about_ca_topic_score_codex":0.000027521697,"about_ca_topic_score_gemma":0.0000022765455,"teacher_disagreement_score":0.56022173,"about_ca_system_score_codex":0.000024615427,"about_ca_system_score_gemma":0.0002807544,"threshold_uncertainty_score":0.6581244},"labels":[],"label_agreement":null},{"id":"W4389166181","doi":"10.1172/jci174952","title":"The gift of preexisting immunity for developing an alternative vaccine strategy","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"Canadian Institutes of Health Research; National Institutes of Health; Fonds de Recherche du Québec - Santé; Bill and Melinda Gates Foundation","keywords":"Immunity; Medicine; Vaccination; Immunology; Pandemic; Adjuvant; Virology; Disease; Influenza vaccine; Immune system; Infectious disease (medical specialty); Coronavirus disease 2019 (COVID-19); Internal medicine","score_opus":0.5310517054774201,"score_gpt":0.5648715451551933,"score_spread":0.033819839677773245,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389166181","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995947,0.0001615231,0.0006290062,0.002577166,0.00023302594,0.00028292913,0.0000043529644,0.000012588155,0.00015240339],"genre_scores_gemma":[0.99181247,0.0006412044,0.0062706433,0.00029450512,0.0008189794,0.000009012235,0.000008076094,0.000014453459,0.00013064024],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9975266,0.00031343178,0.0014672955,0.000089322886,0.00042552166,0.00017783842],"domain_scores_gemma":[0.9931985,0.0037601863,0.0010912135,0.00015700681,0.001662093,0.00013100817],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0070864977,0.00007961442,0.00039981876,0.00010480281,0.00019296886,0.000022008626,0.00017700308,0.00006727004,0.0000022792883],"category_scores_gemma":[0.02470252,0.00004815123,0.00014909927,0.00028025953,0.00020563652,0.00020091402,0.00005692432,0.00044807038,0.0000027016067],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010346952,0.0005224794,0.5398075,0.0015660056,0.0034581542,0.00008774905,0.0057011754,0.003115268,0.04252492,0.032069582,0.011484553,0.34931564],"study_design_scores_gemma":[0.0043136985,0.003967417,0.911009,0.00071649934,0.00014082385,0.000017627504,0.0015978426,0.011523669,0.017851077,0.046128057,0.002608265,0.00012599844],"about_ca_topic_score_codex":0.00002596722,"about_ca_topic_score_gemma":0.000022239694,"teacher_disagreement_score":0.37120152,"about_ca_system_score_codex":0.00004066017,"about_ca_system_score_gemma":0.000565716,"threshold_uncertainty_score":0.9835128},"labels":[],"label_agreement":null},{"id":"W4389802235","doi":"10.1172/jci163470","title":"Foxp3-mediated blockage of ryanodine receptor 2 underlies contact-based suppression by regulatory T cells","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Libin Cardiovascular Institute of Alberta; University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Jiangsu Science and Technology Department; Tsinghua University; National Natural Science Foundation of China; University of Calgary","keywords":"FOXP3; Ryanodine receptor; Immunology; Autoimmunity; Immune system; Cell biology; Biology; Effector; Ryanodine receptor 2","score_opus":0.041345501750492016,"score_gpt":0.3040037429278679,"score_spread":0.2626582411773759,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389802235","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99391955,0.0008454001,0.00006453828,0.001966362,0.0028841174,0.00013243822,0.000051566672,0.000050990828,0.000085036525],"genre_scores_gemma":[0.99710274,0.00033812926,0.00019603413,0.00044435175,0.000112427355,0.0000026146745,0.00029129026,0.000018080946,0.0014943624],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99660164,0.0008489904,0.0019425878,0.00021295501,0.0001228173,0.00027101234],"domain_scores_gemma":[0.9955877,0.0020053228,0.0017475664,0.00025352172,0.00032298962,0.00008291687],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017972817,0.00018202155,0.00074006506,0.0002203955,0.00009671418,0.000010091449,0.00030238132,0.00066025625,0.00046488756],"category_scores_gemma":[0.0012296519,0.00014258761,0.00029262502,0.00029171255,0.00067033904,0.00014174849,0.000057209923,0.0007413941,0.0003432342],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003948161,0.0001790538,0.0044067283,0.00002984952,0.00014109617,0.0000042120155,0.00007118863,0.000021292484,0.84879714,0.000065612425,0.14510947,0.00077952666],"study_design_scores_gemma":[0.003735102,0.0011182826,0.0048594847,0.00017194755,0.00008502408,0.000007934527,0.00012685044,0.000050427087,0.9415522,0.00040659803,0.047742136,0.0001439902],"about_ca_topic_score_codex":0.000016740083,"about_ca_topic_score_gemma":0.000002893626,"teacher_disagreement_score":0.09736734,"about_ca_system_score_codex":0.000028824663,"about_ca_system_score_gemma":0.0002924722,"threshold_uncertainty_score":0.5814554},"labels":[],"label_agreement":null},{"id":"W4389947337","doi":"10.1172/jci170594","title":"Bik promotes proteasomal degradation to control low-grade inflammation","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cell death mechanisms and regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases; National Institute of Environmental Health Sciences; Ohio State University; University of North Carolina at Chapel Hill; National Institutes of Health; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; Brigham and Women's Hospital; Cystic Fibrosis Foundation","keywords":"Inflammation; Immunology; Medicine","score_opus":0.04320515226955572,"score_gpt":0.33869690389015367,"score_spread":0.29549175162059793,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389947337","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9831644,0.000027541539,0.012996993,0.0029235885,0.00048165588,0.00036309438,0.000002747143,0.0000147753735,0.000025166168],"genre_scores_gemma":[0.9946764,0.000056094737,0.0030818896,0.0002547256,0.0015078795,0.000011902037,0.00007576231,0.000014796882,0.00032056737],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99834824,0.00018720161,0.00090518093,0.00015968445,0.00027190466,0.00012781016],"domain_scores_gemma":[0.9987177,0.000059929826,0.0005949614,0.0001357266,0.000312307,0.00017937332],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016728385,0.00009555819,0.00019581121,0.00012025048,0.000058458827,0.000035104797,0.00010785072,0.00019256164,0.0000063017956],"category_scores_gemma":[0.0015844961,0.000078326295,0.00014459291,0.00022652936,0.000043535387,0.000021630105,0.000024617695,0.00013165633,0.000026967193],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015704775,0.00003652796,0.006095864,0.00002555234,0.000047348294,0.0000036125732,0.000049651193,0.0021463626,0.9624024,0.00035338206,0.001619445,0.027062804],"study_design_scores_gemma":[0.0032485996,0.0023081857,0.22403467,0.00021139707,0.000096110234,0.000034474895,0.000065980246,0.013612071,0.73629004,0.007947361,0.011826207,0.00032490102],"about_ca_topic_score_codex":0.0000023921493,"about_ca_topic_score_gemma":0.000005735935,"teacher_disagreement_score":0.22611235,"about_ca_system_score_codex":0.000011396518,"about_ca_system_score_gemma":0.00014173385,"threshold_uncertainty_score":0.31940535},"labels":[],"label_agreement":null},{"id":"W4390120447","doi":"10.1172/jci174508","title":"Mechanosensitive channels TMEM63A and TMEM63B mediate lung inflation–induced surfactant secretion","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Neonatal Respiratory Health Research","field":"Medicine","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Aging","funders":"Natural Science Foundation of Sichuan Province; National Natural Science Foundation of China","keywords":"Lamellar granule; Mechanosensitive channels; Pulmonary surfactant; Cell biology; Secretion; Lung; Alveolar cells; Chemistry; Biology; Endocrinology; Internal medicine; Medicine; Biochemistry; Receptor; Ion channel","score_opus":0.16207765356327236,"score_gpt":0.4745671265137018,"score_spread":0.31248947295042945,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390120447","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98624116,0.0020955538,0.00047686487,0.009200079,0.0014249047,0.0003924657,0.000004843627,0.00003465572,0.00012949297],"genre_scores_gemma":[0.99517983,0.0011213764,0.0007379036,0.0012162399,0.0016028313,0.0000039175407,0.000012061621,0.000026731315,0.00009908653],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9966456,0.00043878,0.0015676471,0.00024893926,0.00086915656,0.00022987588],"domain_scores_gemma":[0.99616235,0.0016954294,0.00047311457,0.00013906875,0.0007451755,0.0007848274],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0051398147,0.00014373237,0.0005178413,0.00034714333,0.00007157916,0.00007375988,0.00006123253,0.00027538923,0.000053901244],"category_scores_gemma":[0.0066022673,0.000110631816,0.00015971305,0.0003829944,0.00016599966,0.00048112674,0.000039090683,0.0011449468,0.0000286387],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004869472,0.00038319835,0.049016315,0.0060975477,0.0013635263,0.0040153973,0.004241621,0.00013665523,0.38462,0.01026112,0.0047178143,0.5302773],"study_design_scores_gemma":[0.012131898,0.012497333,0.52980745,0.01153703,0.0013043359,0.00201808,0.00071070465,0.22136399,0.12671039,0.049017694,0.031839333,0.0010617602],"about_ca_topic_score_codex":0.000010984797,"about_ca_topic_score_gemma":0.0000042372394,"teacher_disagreement_score":0.5292156,"about_ca_system_score_codex":0.0001351732,"about_ca_system_score_gemma":0.0012472012,"threshold_uncertainty_score":0.79040074},"labels":[],"label_agreement":null},{"id":"W4390875529","doi":"10.1172/jci169241","title":"FGFR inhibition augments anti–PD-1 efficacy in murine FGFR3-mutant bladder cancer by abrogating immunosuppression","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Bladder and Urothelial Cancer Treatments","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Japan Society for the Promotion of Science; Gillings School of Public Health; York University; National Cancer Institute; University of North Carolina at Chapel Hill; National Institutes of Health; Uehara Memorial Foundation","keywords":"Fibroblast growth factor receptor; Cancer research; Fibroblast growth factor; In vivo; Immunosuppression; Biology; Receptor; Immunology","score_opus":0.061160462635822935,"score_gpt":0.41870732933391624,"score_spread":0.3575468666980933,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390875529","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99012285,0.0033579103,0.00009141178,0.0044833263,0.0013351246,0.0003013342,0.000019553645,0.000033205706,0.0002552946],"genre_scores_gemma":[0.9952831,0.0018367019,0.00059195387,0.00097398006,0.00094192394,0.000011372243,0.00004178938,0.000034035438,0.00028511853],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9970198,0.00020113638,0.0017314787,0.00026806485,0.00055945315,0.00022005376],"domain_scores_gemma":[0.9985828,0.00032059965,0.00049991487,0.0001471377,0.0001821966,0.0002673432],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010183837,0.00018995698,0.00055515906,0.00018531123,0.00005292133,0.000067635425,0.00007336999,0.00020163026,0.00030261392],"category_scores_gemma":[0.00055764674,0.00014048231,0.00024107167,0.0003553137,0.000121296165,0.00045405477,0.000032166656,0.0007987261,0.00002111628],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002298751,0.0031449033,0.31109765,0.0011933127,0.0013270471,0.0015486801,0.0018111691,0.00044846404,0.4913831,0.00017771246,0.0482949,0.1372743],"study_design_scores_gemma":[0.03014388,0.0039084675,0.67985255,0.021392277,0.0015095634,0.00050063257,0.00026400137,0.0049636276,0.23517174,0.001812695,0.019814702,0.00066590373],"about_ca_topic_score_codex":0.00013906445,"about_ca_topic_score_gemma":0.0000075524604,"teacher_disagreement_score":0.3687549,"about_ca_system_score_codex":0.00019063403,"about_ca_system_score_gemma":0.0005226948,"threshold_uncertainty_score":0.57287025},"labels":[],"label_agreement":null},{"id":"W4391231869","doi":"10.1172/jci172760","title":"p40 homodimers bridge ischemic tissue inflammation and heterologous alloimmunity in mice via IL-15 transpresentation","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Alloimmunity; Effector; CD8; Memory T cell; Heterologous; Biology; T cell; Cytotoxic T cell; Cell biology; Inflammation; Immunology; Immune system; In vitro","score_opus":0.0467201214674135,"score_gpt":0.3443934038866525,"score_spread":0.297673282419239,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391231869","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.990228,0.0017111979,0.0018439194,0.0020215253,0.0038519793,0.0001337813,0.0000017539685,0.00002712504,0.00018071507],"genre_scores_gemma":[0.998378,0.0004812528,0.00014368816,0.00023772694,0.00016505587,0.0000035461987,0.00007936989,0.000011567423,0.0004998347],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99781144,0.00055935787,0.0012773682,0.00015824885,0.00006226973,0.00013132038],"domain_scores_gemma":[0.99880046,0.00054549443,0.0004000824,0.000086732456,0.00012970377,0.0000375415],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014194024,0.00011966717,0.0002967705,0.00024336204,0.000058633,0.000041550527,0.00009174049,0.00031178782,0.0001307941],"category_scores_gemma":[0.00042551936,0.000107458836,0.00010926127,0.0001644334,0.00020191465,0.0007146494,0.000016279715,0.0009569301,0.000102654805],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035330234,0.000048822436,0.0030123978,0.000053700922,0.00011085761,0.00000971899,0.0009031191,0.00006546192,0.9491001,0.00005431252,0.004903984,0.04138423],"study_design_scores_gemma":[0.003367991,0.0013934949,0.20455244,0.0004981536,0.00024048475,0.0007176212,0.00032128222,0.0018659162,0.7061882,0.0016727154,0.078855775,0.00032589727],"about_ca_topic_score_codex":0.0001185271,"about_ca_topic_score_gemma":0.000036013258,"teacher_disagreement_score":0.24291188,"about_ca_system_score_codex":0.000043308533,"about_ca_system_score_gemma":0.000079204525,"threshold_uncertainty_score":0.4382044},"labels":[],"label_agreement":null},{"id":"W4391340227","doi":"10.1172/jci173782","title":"mTORC1 controls murine postprandial hepatic glycogen synthesis via Ppp1r3b","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Genetics and Neurodevelopmental Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Nutrition, Metabolism and Diabetes","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institutes of Health; Novo Nordisk Foundation Center for Basic Metabolic Research; Novo Nordisk Fonden; Novo Nordisk; University of Pennsylvania","keywords":"Postprandial; Glycogen; Liver metabolism; mTORC1; Glycogen synthase; Chemistry; Endocrinology; Biochemistry; Gluconeogenesis; Internal medicine; Biology; Metabolism; Medicine; Insulin; Phosphorylation","score_opus":0.028430970165913144,"score_gpt":0.32095518718512117,"score_spread":0.29252421701920805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391340227","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99460477,0.0012286336,0.0017593572,0.0011517105,0.0009166697,0.000103459686,0.0000066737543,0.0000069358834,0.00022177225],"genre_scores_gemma":[0.9966339,0.0008432055,0.0011792053,0.0007525914,0.00045668424,0.000004595075,0.000014866173,0.0000210042,0.00009398676],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99833024,0.00017259743,0.00093784655,0.00019953758,0.00022247362,0.00013729047],"domain_scores_gemma":[0.99911976,0.00017788759,0.00026726042,0.00012545753,0.00012571749,0.00018393352],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008715953,0.00012414606,0.0002609378,0.00006378936,0.00003803892,0.000050438335,0.00015238606,0.00014971563,0.00003435132],"category_scores_gemma":[0.0011225602,0.000101938014,0.00025601493,0.00008983387,0.00011630765,0.000009919306,0.000040980874,0.00019140745,0.000022739701],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000831008,0.00014877683,0.018960362,0.00009591176,0.00043810077,0.00006430139,0.00006851978,0.00017559231,0.9278203,0.00011731641,0.0051671527,0.04611265],"study_design_scores_gemma":[0.005059728,0.008280755,0.33931178,0.0007200875,0.0008294935,0.00051242526,0.0000893044,0.0045137685,0.47654203,0.013293255,0.14969899,0.0011483831],"about_ca_topic_score_codex":0.000004344545,"about_ca_topic_score_gemma":0.0000073743377,"teacher_disagreement_score":0.4512783,"about_ca_system_score_codex":0.000009621624,"about_ca_system_score_gemma":0.00023271714,"threshold_uncertainty_score":0.41569114},"labels":[],"label_agreement":null},{"id":"W4391430175","doi":"10.1172/jci176454","title":"HER2 heterogeneity and treatment response–associated profiles in HER2-positive breast cancer in the NCT02326974 clinical trial","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"HER2/EGFR in Cancer Research","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Genentech; Astellas Pharma; Eisai; Knight Cancer Institute, Oregon Health and Science University; G1 Therapeutics; MacroGenics; Puma Biotechnology; Incyte; National Cancer Institute; Natera; Genomic Health; Daiichi Sankyo Europe; Sanofi; Oregon Health and Science University; Gilead Sciences; University of Texas Southwestern Medical Center; Amgen; Pfizer; Susan G. Komen for the Cure; AstraZeneca; Eli Lilly and Company","keywords":"Breast cancer; Trastuzumab; Medicine; Pertuzumab; Lapatinib; Oncology; Internal medicine; KRAS; Neoadjuvant therapy; ErbB; Cancer research; Cancer; Colorectal cancer","score_opus":0.25934820909865275,"score_gpt":0.5403783004386817,"score_spread":0.281030091340029,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391430175","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95783967,0.0009855087,0.0000035328744,0.039251953,0.00095297204,0.0008623131,0.000044842196,0.000011551599,0.000047630278],"genre_scores_gemma":[0.99439454,0.0023041563,0.00013611685,0.001090894,0.0019019662,0.00005227523,0.000007296697,0.000021801276,0.00009093874],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9923057,0.0041119712,0.002311567,0.00032213135,0.00068651774,0.0002621066],"domain_scores_gemma":[0.99417984,0.004580426,0.0004475474,0.00019391668,0.00024109652,0.00035714108],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.015737036,0.00016736545,0.000771936,0.00022018525,0.00004079983,0.0000890507,0.00014247485,0.00033089353,0.000048483675],"category_scores_gemma":[0.0065240236,0.00010001372,0.0003106065,0.00052764564,0.00045711952,0.0001688051,0.00003224652,0.0013521174,0.0000069170205],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.07342274,0.0013367034,0.84551316,0.000066206696,0.00035684236,0.0008786658,0.0011785028,0.000019086203,0.00031130182,0.000048608366,0.0022145947,0.074653566],"study_design_scores_gemma":[0.021574613,0.005534036,0.9680168,0.001486914,0.00013902098,0.00012732176,0.00016831033,0.0008537507,0.00020268603,0.0003855653,0.0014155618,0.00009542706],"about_ca_topic_score_codex":0.00034713297,"about_ca_topic_score_gemma":0.0010351782,"teacher_disagreement_score":0.12250361,"about_ca_system_score_codex":0.00051715865,"about_ca_system_score_gemma":0.0025399677,"threshold_uncertainty_score":0.7810337},"labels":[],"label_agreement":null},{"id":"W4391805863","doi":"10.1172/jci174824","title":"A metabolic signature for NADSYN1-dependent congenital NAD deficiency disorder","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto; Mount Sinai Hospital","funders":"National Center for Advancing Translational Sciences; National Heart, Lung, and Blood Institute; National Institutes of Health; Medical Research Council; NSW Ministry of Health; National Institute for Health and Care Research; National Health and Medical Research Council; Broad Institute","keywords":"NAD+ kinase; Nicotinamide adenine dinucleotide; Nicotinamide; Metabolome; Nicotinamide mononucleotide; Biology; Newborn screening; Phenotype; Biochemistry; Genetics; Enzyme; Gene; Metabolite","score_opus":0.04280033503312107,"score_gpt":0.36905041256544086,"score_spread":0.32625007753231977,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391805863","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9514935,0.026156295,0.019140791,0.0015954402,0.0012297462,0.00015433243,0.000030005203,0.0000062147856,0.00019367794],"genre_scores_gemma":[0.9947551,0.0011530103,0.0016949361,0.00045313622,0.0011122245,0.000013841681,0.00003372489,0.000015293597,0.0007687677],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988019,0.00007128065,0.0006722326,0.00017961198,0.00016670601,0.00010828714],"domain_scores_gemma":[0.9991702,0.000081774386,0.00023024937,0.00013079982,0.0002735557,0.00011341637],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000907905,0.000086358916,0.00017233986,0.00004931952,0.000048313563,0.000058151556,0.00013276482,0.00017670466,0.000021577342],"category_scores_gemma":[0.0006494023,0.00006611707,0.00025632442,0.00009479023,0.000104119674,0.000015702393,0.000018138579,0.00020378001,0.0000052874493],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00050280715,0.00042423702,0.012276328,0.00018558015,0.00079497887,0.000016929776,0.000248575,0.0015675129,0.6738916,0.012298165,0.079436295,0.21835695],"study_design_scores_gemma":[0.002276303,0.0017704638,0.021273829,0.00012135054,0.0005092471,0.00010639359,0.00022920365,0.0020541241,0.07917717,0.009918278,0.88209695,0.0004666936],"about_ca_topic_score_codex":0.0000041326152,"about_ca_topic_score_gemma":0.000018480503,"teacher_disagreement_score":0.80266064,"about_ca_system_score_codex":0.0000075888624,"about_ca_system_score_gemma":0.0003809505,"threshold_uncertainty_score":0.2696176},"labels":[],"label_agreement":null},{"id":"W4392032909","doi":"10.1172/jci170559","title":"Comparative genomics incorporating translocation renal cell carcinoma mouse model reveals molecular mechanisms of tumorigenesis","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Renal cell carcinoma treatment","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Microsemi (Canada)","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Cancer Institute; National Institutes of Health; University of Texas Southwestern Medical Center; Cancer Prevention and Research Institute of Texas; U.S. Department of Defense","keywords":"TFEB; Biology; TFE3; Carcinogenesis; Cancer research; mTORC1; Cell biology; Cancer; Genetics; Autophagy; Signal transduction; Gene; PI3K/AKT/mTOR pathway; Gene expression; Apoptosis","score_opus":0.11307634480716948,"score_gpt":0.3587772021913969,"score_spread":0.24570085738422742,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392032909","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8942879,0.0007919597,0.103605926,0.00060370046,0.00017775527,0.00030407615,0.00001044842,0.000015542866,0.00020270662],"genre_scores_gemma":[0.93300784,0.00005711122,0.066356145,0.00019150926,0.00019537857,0.0000056910776,0.000024271974,0.000028551418,0.00013353578],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9964348,0.00027947625,0.0023301763,0.0002458947,0.00056694495,0.00014268814],"domain_scores_gemma":[0.9974342,0.00030286983,0.0011406383,0.000221368,0.0005836075,0.00031728824],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001823095,0.00019471032,0.00087161193,0.00023232722,0.00003590919,0.000028574188,0.000118582284,0.00016950448,0.000008274156],"category_scores_gemma":[0.00018103233,0.00015613488,0.00044312817,0.00026378917,0.00015126035,0.0002132457,0.000018179544,0.00045297714,0.000006988605],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026037294,0.0002103978,0.0010407949,0.0002762187,0.0001419962,0.000110892,0.00066142186,0.0107547175,0.9838071,0.0018620929,0.0001497727,0.0007242319],"study_design_scores_gemma":[0.0010929469,0.0014051363,0.0026104513,0.00031872006,0.00051928754,0.000067920875,0.00012292745,0.07466387,0.8959649,0.02311035,0.0000065515014,0.00011690387],"about_ca_topic_score_codex":0.000012066367,"about_ca_topic_score_gemma":0.0000019361287,"teacher_disagreement_score":0.08784216,"about_ca_system_score_codex":0.00017748568,"about_ca_system_score_gemma":0.0010605336,"threshold_uncertainty_score":0.63669956},"labels":[],"label_agreement":null},{"id":"W4393189196","doi":"10.1172/jci178351","title":"IgG hexamers initiate complement-dependent acute lung injury","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier de l'Université Laval; Centre hospitalier universitaire de Québec","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; AABB Foundation; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; National Blood Foundation; University of California, San Francisco; National Institutes of Health","keywords":"Complement system; Antibody; Immunology; Medicine; Blocking antibody; Random hexamer; Cancer research; Biology; Molecular biology","score_opus":0.14414094659320312,"score_gpt":0.48469307831616787,"score_spread":0.3405521317229647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393189196","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97869235,0.0010824043,0.00032543478,0.016514573,0.0015926437,0.00018357701,0.00002966318,0.000027553027,0.001551781],"genre_scores_gemma":[0.9874255,0.0021210383,0.0019257388,0.0040244535,0.0021843328,0.0000029808705,0.00003659191,0.00002381829,0.00225552],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99700344,0.00021840753,0.001537646,0.00018200374,0.00083161297,0.00022689666],"domain_scores_gemma":[0.9980606,0.0006537213,0.00031729508,0.00012915698,0.00032228918,0.0005169753],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022220544,0.00013156839,0.0004894851,0.00021826859,0.000058334463,0.00007274897,0.00013720662,0.00011649727,0.00045563557],"category_scores_gemma":[0.0006869375,0.000091415255,0.00037605883,0.00023028669,0.00025181109,0.00026765137,0.00006448486,0.0010259526,0.00010053038],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0048641153,0.0006417847,0.35157567,0.0016558031,0.005269402,0.0046154875,0.0009554852,0.000020243995,0.045726042,0.010456965,0.3838122,0.1904068],"study_design_scores_gemma":[0.008574845,0.016276814,0.42558149,0.007242145,0.0035881097,0.003827118,0.0004769672,0.020378243,0.029781021,0.047059923,0.43614414,0.0010691817],"about_ca_topic_score_codex":0.000023312105,"about_ca_topic_score_gemma":0.0000028045008,"teacher_disagreement_score":0.18933761,"about_ca_system_score_codex":0.0000623132,"about_ca_system_score_gemma":0.00058591197,"threshold_uncertainty_score":0.498889},"labels":[],"label_agreement":null},{"id":"W4393189307","doi":"10.1172/jci169470","title":"Oncogenic ETS fusions promote DNA damage and proinflammatory responses via pericentromeric RNAs in extracellular vesicles","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Extracellular vesicles in disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University of British Columbia; Programs for Assessment of Technology in Health Research Institute; University of Toronto; University Health Network; Ontario Institute for Cancer Research","funders":"Ministerio de Economía y Competitividad; Deutsche Forschungsgemeinschaft; Canadian Institutes of Health Research; Government of Ontario; Conquer Cancer Foundation","keywords":"Biology; Cell biology; Proinflammatory cytokine; Cancer research; Extracellular vesicle; DNA damage; ETS transcription factor family; Ectopic expression; Innate immune system; Transcription factor; DNA; Genetics; Inflammation; microRNA; Gene; Immunology; Immune system; Microvesicles","score_opus":0.03041822540590592,"score_gpt":0.3389200280306967,"score_spread":0.30850180262479077,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393189307","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9867101,0.011026743,0.00060114905,0.0010552634,0.00035255207,0.00020110863,0.000004699176,0.000011924007,0.000036474936],"genre_scores_gemma":[0.9949019,0.00080128433,0.0031920103,0.00016642609,0.00057202374,0.000005443505,0.00001385275,0.000029994091,0.0003170909],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975254,0.0005211252,0.0012088809,0.0002998883,0.0002558045,0.00018893425],"domain_scores_gemma":[0.9987824,0.00017239312,0.00039987237,0.00023210177,0.00010873052,0.00030450488],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002212939,0.00015677394,0.000277807,0.00013675139,0.00005058008,0.00006908999,0.00018063921,0.00021172053,0.000020018413],"category_scores_gemma":[0.0015407647,0.00013888214,0.00019289232,0.00018756885,0.00030984342,0.00003816443,0.00008750273,0.00041506143,0.00001249065],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002407975,0.00010507565,0.01054587,0.000082200066,0.000057704296,0.00027578115,0.000117366966,0.000024600755,0.9765123,0.0000726737,0.00067023543,0.011295409],"study_design_scores_gemma":[0.0030420811,0.002178205,0.33420375,0.0010099213,0.0003485916,0.0006028487,0.00025984042,0.008156645,0.576552,0.008360465,0.06452377,0.00076191063],"about_ca_topic_score_codex":0.0000020285408,"about_ca_topic_score_gemma":0.00000403787,"teacher_disagreement_score":0.3999603,"about_ca_system_score_codex":0.000025269928,"about_ca_system_score_gemma":0.00049066497,"threshold_uncertainty_score":0.566345},"labels":[],"label_agreement":null},{"id":"W4393930112","doi":"10.1172/jci171002","title":"Neutrophil-mediated innate immune resistance to bacterial pneumonia is dependent on Tet2 function","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Neutrophil, Myeloperoxidase and Oxidative Mechanisms","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University; McMaster University; St. Joseph’s Healthcare Hamilton","funders":"Canadian Institutes of Health Research; McMaster University","keywords":"Innate immune system; Biology; Immune system; Immunology; Inflammation; Haematopoiesis; Neutrophil extracellular traps; Pneumonia; Myeloid; Streptococcus pneumoniae; Medicine; Microbiology; Cell biology; Internal medicine; Stem cell","score_opus":0.04209777068351203,"score_gpt":0.31730763087559066,"score_spread":0.2752098601920786,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393930112","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98165876,0.0007437968,0.00033480782,0.008844285,0.007920713,0.00020524867,0.00003639246,0.00005184858,0.00020413975],"genre_scores_gemma":[0.99421775,0.00020673969,0.00020120984,0.0026709957,0.00079280016,0.0000074834484,0.00005192714,0.000030047531,0.0018210367],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970091,0.00059720705,0.0016344256,0.0003508787,0.00015180922,0.0002565851],"domain_scores_gemma":[0.9981943,0.00061316346,0.00053622475,0.00024034237,0.00029076493,0.00012525679],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0016413198,0.00022025747,0.0005422414,0.00029126264,0.000115487965,0.00007606682,0.00024241662,0.00034452477,0.00040630696],"category_scores_gemma":[0.00077298307,0.00016978232,0.0002662198,0.00033327006,0.00014586413,0.00029970048,0.0000548016,0.0009914322,0.0013414731],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019168005,0.00009010095,0.00016373713,0.000024773337,0.0002451554,0.00005572002,0.00015743605,0.000011597715,0.98579264,0.0020446407,0.0056671463,0.0038302315],"study_design_scores_gemma":[0.0023090525,0.004322159,0.030443216,0.00080607395,0.00022432048,0.000060014925,0.00006198612,0.000010889255,0.81904745,0.0091152,0.13324746,0.00035219017],"about_ca_topic_score_codex":0.00000490634,"about_ca_topic_score_gemma":0.000008529846,"teacher_disagreement_score":0.16674523,"about_ca_system_score_codex":0.00007360063,"about_ca_system_score_gemma":0.00022561998,"threshold_uncertainty_score":0.9994361},"labels":[],"label_agreement":null},{"id":"W4393993383","doi":"10.1172/jci173537","title":"Satellite glial GPR37L1 and its ligand maresin 1 regulate potassium channel signaling and pain homeostasis","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pain Mechanisms and Treatments","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"National Institute of Dental and Craniofacial Research; National Institute on Drug Abuse; National Institute of Neurological Disorders and Stroke; Pfizer Canada; Canada Excellence Research Chairs, Government of Canada; National Institutes of Health; Pfizer","keywords":"Neuropathic pain; Potassium channel; Cell biology; Pharmacology; Chronic pain; Chemistry; Endocrinology; Medicine; Neuroscience; Internal medicine; Biology","score_opus":0.07369710703688231,"score_gpt":0.3584973057605149,"score_spread":0.2848001987236326,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393993383","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9818684,0.010329815,0.00042141255,0.00672733,0.00043821154,0.00015320256,0.000006864178,0.000020697074,0.00003406667],"genre_scores_gemma":[0.9926542,0.0031808724,0.0022691546,0.0008835184,0.00077119813,0.0000016638322,0.000009075853,0.000019891224,0.00021042727],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99816227,0.00028853022,0.0009070716,0.00020455667,0.0002897699,0.00014779253],"domain_scores_gemma":[0.9983657,0.00071544445,0.00029600965,0.00007642158,0.00014707824,0.00039933386],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0039372165,0.00013782422,0.0004426083,0.00014862814,0.00006017123,0.00008551728,0.00003489218,0.00017429402,0.000009928528],"category_scores_gemma":[0.0013243498,0.0000999992,0.00012413046,0.00014314167,0.00008914403,0.00021681593,0.000022234,0.00035623653,0.0000044038006],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0028564855,0.0006505333,0.058708347,0.0026929707,0.0026239452,0.004280725,0.003326899,0.000052841777,0.11879525,0.0043657767,0.0046886215,0.7969576],"study_design_scores_gemma":[0.01959039,0.014580409,0.43366647,0.018660577,0.0050477767,0.0028298025,0.00076669885,0.06465098,0.16435525,0.2577511,0.016709818,0.0013907171],"about_ca_topic_score_codex":0.0000036596298,"about_ca_topic_score_gemma":0.0000015859015,"teacher_disagreement_score":0.79556686,"about_ca_system_score_codex":0.000026487804,"about_ca_system_score_gemma":0.00013935701,"threshold_uncertainty_score":0.4077849},"labels":[],"label_agreement":null},{"id":"W4394792404","doi":"10.1172/jci168536","title":"Hyperactive STAT5 hijacks T cell receptor signaling and drives immature T cell acute lymphoblastic leukemia","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Acute Lymphoblastic Leukemia research","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Veterinärmedizinische Universität Wien; St. Jude Children's Research Hospital; Academy of Finland; Austrian Science Fund; European Commission; Syöpäjärjestöt; Lymphoma Research Foundation","keywords":"T-cell receptor; T cell; Biology; STAT5; Cancer research; T-cell leukemia; Cell biology; ZAP70; Leukemia; Signal transduction; Immunology","score_opus":0.03173571434599548,"score_gpt":0.35226380040656247,"score_spread":0.320528086060567,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394792404","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9918238,0.0012385433,0.0025027548,0.0023540484,0.0011105175,0.0002572198,0.000019509427,0.000046513072,0.0006470775],"genre_scores_gemma":[0.97370404,0.001120218,0.020970056,0.0007655168,0.0018520869,0.0000047045305,0.00002581777,0.00006173256,0.0014958458],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99641454,0.00032400308,0.0016448483,0.00039126436,0.00088642153,0.00033890366],"domain_scores_gemma":[0.99440587,0.003371107,0.0006342955,0.00020733218,0.00057838013,0.0008030144],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017637349,0.00026178712,0.00076548493,0.0003090017,0.00008890254,0.00015918213,0.00016973304,0.00041571743,0.00013097041],"category_scores_gemma":[0.0017795457,0.00019266889,0.00031098028,0.0004036037,0.0004421092,0.00057153497,0.00008257241,0.0015470326,0.0001021495],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0042457846,0.00033906667,0.0084211,0.0014782309,0.0011781639,0.002403075,0.0028642376,0.00047697106,0.91326207,0.00029127038,0.052857786,0.012182271],"study_design_scores_gemma":[0.039541908,0.015136569,0.05183221,0.011685233,0.007731708,0.0074840044,0.0042136246,0.1521319,0.6532931,0.014349871,0.040421985,0.0021778904],"about_ca_topic_score_codex":0.0000103967095,"about_ca_topic_score_gemma":4.1995267e-7,"teacher_disagreement_score":0.25996894,"about_ca_system_score_codex":0.00075587066,"about_ca_system_score_gemma":0.0040845084,"threshold_uncertainty_score":0.78568095},"labels":[],"label_agreement":null},{"id":"W4394853712","doi":"10.1172/jci170809","title":"The estrogen signaling pathway reprograms prostate cancer cell metabolism and supports proliferation and disease progression","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Hôtel-Dieu de Québec","funders":"Canadian Institutes of Health Research","keywords":"Prostate cancer; Estrogen receptor; Cancer research; Biology; Estrogen receptor beta; Cell growth; Androgen receptor; Estrogen; Estrogen receptor alpha; Nuclear receptor; Cancer; Endocrinology; Breast cancer; Transcription factor; Genetics","score_opus":0.06051771547079411,"score_gpt":0.4157072906028091,"score_spread":0.355189575132015,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394853712","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.930051,0.057165608,0.00001599276,0.0118644675,0.00030559607,0.0005499617,0.000005324104,0.000018308512,0.000023700997],"genre_scores_gemma":[0.9865328,0.011385692,0.0007237552,0.00017715202,0.0007242598,0.000044818,0.000015068727,0.000016417851,0.0003800348],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99836636,0.0001616879,0.0007274363,0.0001975537,0.00039260252,0.00015436897],"domain_scores_gemma":[0.9985684,0.00024760357,0.0002724677,0.00009833327,0.00025018377,0.000562981],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018758216,0.00010246025,0.00023530172,0.000039714912,0.00013910815,0.000200461,0.000035135832,0.00006687904,0.0000068851014],"category_scores_gemma":[0.00049237546,0.000051839164,0.00009378874,0.00010807809,0.00027481248,0.0003141982,0.00002684477,0.00034199262,7.798184e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002098342,0.00017334057,0.39072266,0.0006435328,0.0002587796,0.00038201996,0.0010128422,0.000010216524,0.009291665,0.0005548278,0.0011668168,0.593685],"study_design_scores_gemma":[0.018832045,0.008314255,0.5478918,0.011930241,0.004568458,0.00064217206,0.0014854736,0.025905643,0.16001672,0.06688679,0.15246718,0.0010592603],"about_ca_topic_score_codex":0.000006886011,"about_ca_topic_score_gemma":0.00000245312,"teacher_disagreement_score":0.5926257,"about_ca_system_score_codex":0.000034434663,"about_ca_system_score_gemma":0.00096741185,"threshold_uncertainty_score":0.21139398},"labels":[],"label_agreement":null},{"id":"W4395031928","doi":"10.1172/jci166085","title":"Human NLRC4 expression promotes cancer survival and associates with type I interferon signaling and immune infiltration","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sante Montreal; Institut National de la Recherche Scientifique; McGill University","funders":"National Institute on Aging; Institut National Du Cancer; Université de Bordeaux","keywords":"Immune system; Infiltration (HVAC); Interferon; Cancer research; Signal transduction; Biology; Immunology; Interferon type I; Cancer; Cell biology; Genetics","score_opus":0.07714908873826772,"score_gpt":0.3681700378857463,"score_spread":0.2910209491474786,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4395031928","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9923347,0.0039746896,0.00013290453,0.0005962846,0.0027455764,0.00007421765,7.034452e-7,0.000021908803,0.00011899628],"genre_scores_gemma":[0.99842787,0.00028615992,0.00011025848,0.000067456596,0.00018062569,0.0000018617982,0.000017022536,0.000010519387,0.00089820626],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99873763,0.0002818058,0.00070877525,0.00013280274,0.000051885123,0.000087124914],"domain_scores_gemma":[0.9989828,0.00031343164,0.00041870543,0.00005131962,0.0002043301,0.000029399198],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009897837,0.000096886586,0.0002555083,0.0000884396,0.000106024694,0.000073777584,0.000041310243,0.00017887577,0.00014334571],"category_scores_gemma":[0.00031244726,0.000066753484,0.00004860826,0.00008064457,0.00015898353,0.0004223144,0.000019350211,0.0005405775,0.000007526575],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025955887,0.00003208973,0.0149843795,0.000041616644,0.00014947056,0.000002031559,0.000456653,0.0000085504025,0.97954535,0.00020836202,0.0010095579,0.003302398],"study_design_scores_gemma":[0.0023235201,0.004748877,0.1291612,0.0027843234,0.00033512208,0.00012933518,0.0010379594,0.00024942931,0.84987056,0.0018012478,0.0072453343,0.00031306714],"about_ca_topic_score_codex":0.000033611406,"about_ca_topic_score_gemma":0.000010447714,"teacher_disagreement_score":0.12967475,"about_ca_system_score_codex":0.000024513929,"about_ca_system_score_gemma":0.0000777196,"threshold_uncertainty_score":0.2722128},"labels":[],"label_agreement":null},{"id":"W4395050642","doi":"10.1172/jci167371","title":"Sedentary behavior in mice induces metabolic inflexibility by suppressing skeletal muscle pyruvate metabolism","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Adipose Tissue and Metabolism","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Nutrition, Metabolism and Diabetes; Athletic Edge Sports Medicine","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institutes of Health; National Cancer Institute; National Institute on Aging; National Institute of General Medical Sciences; American Heart Association; Howard Hughes Medical Institute","keywords":"Metabolism; Skeletal muscle; Endocrinology; Internal medicine; Chemistry; Energy metabolism; Biology; Medicine","score_opus":0.08233400625998226,"score_gpt":0.40860817939056776,"score_spread":0.3262741731305855,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4395050642","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9736838,0.021339688,0.000052328465,0.002504179,0.001968786,0.0002679824,0.0000144850255,0.000038226215,0.00013056073],"genre_scores_gemma":[0.99342114,0.0009595238,0.0023672676,0.0012014757,0.0017137253,0.000008299431,0.000030584488,0.000033644053,0.00026435836],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9961282,0.000410912,0.0022750217,0.0003237915,0.00059244205,0.0002696358],"domain_scores_gemma":[0.998107,0.00044169434,0.0005555401,0.00021200521,0.00022433532,0.00045941045],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0031314017,0.00021376196,0.0009602286,0.0003151008,0.00004613057,0.00008304213,0.00016693099,0.0002911421,0.000117803844],"category_scores_gemma":[0.0013954213,0.00016788852,0.00041977587,0.0004892708,0.00029289047,0.0009416738,0.00004831537,0.0013576582,0.000027664042],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030135177,0.001126074,0.053805728,0.0003134779,0.00051978807,0.00092164194,0.0018202616,0.00001887645,0.62933826,0.0008045359,0.009122055,0.30190793],"study_design_scores_gemma":[0.0022815927,0.00024443207,0.849062,0.00048361623,0.0016073575,0.00018860943,0.0001427827,0.00021588287,0.050423715,0.0022788919,0.09283388,0.0002372229],"about_ca_topic_score_codex":0.000096812815,"about_ca_topic_score_gemma":0.000011535155,"teacher_disagreement_score":0.7952563,"about_ca_system_score_codex":0.000035896897,"about_ca_system_score_gemma":0.0005125651,"threshold_uncertainty_score":0.6846295},"labels":[],"label_agreement":null},{"id":"W4396507749","doi":"10.1172/jci176640","title":"Integrated longitudinal multiomics study identifies immune programs associated with acute COVID-19 severity and mortality","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"COVID-19 epidemiological studies","field":"Mathematics","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Prevention of Organ Failure; University of British Columbia","funders":"National Center for Advancing Translational Sciences; National Institute on Drug Abuse; National Institute on Alcohol Abuse and Alcoholism; National Institute of Allergy and Infectious Diseases; Bill and Melinda Gates Foundation; National Institutes of Health; National Science Foundation","keywords":"Coronavirus disease 2019 (COVID-19); 2019-20 coronavirus outbreak; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Medicine; Immune system; Pandemic; Immunology; Virology; Intensive care medicine; Internal medicine; Disease; Infectious disease (medical specialty); Outbreak","score_opus":0.49407827762245166,"score_gpt":0.5325399380350666,"score_spread":0.03846166041261495,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396507749","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9918753,0.00024296787,0.0041011325,0.0026475033,0.00042748122,0.00055257714,0.000013815597,0.00012798478,0.000011253082],"genre_scores_gemma":[0.9958673,0.00014377992,0.0033258393,0.00036652587,0.00016872317,0.000016628628,0.000012787741,0.000019209418,0.00007918581],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99512076,0.0012285718,0.0025044966,0.00037533604,0.0005434608,0.00022735471],"domain_scores_gemma":[0.9889033,0.008624842,0.0013521484,0.00021803957,0.00051677134,0.0003849264],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.011690164,0.0002500253,0.0011030642,0.00010246439,0.00017875593,0.0001986467,0.00020938665,0.00021537508,0.000014737416],"category_scores_gemma":[0.05478132,0.00015439386,0.00025032248,0.00049781264,0.00072587584,0.00038820415,0.00013238624,0.0009884753,0.0000025338734],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020468503,0.00071925326,0.9915739,0.00015545727,0.0024980751,0.00034469517,0.0010223105,0.000021450267,0.000051953557,0.0007643774,0.0009408202,0.0017029706],"study_design_scores_gemma":[0.0013278811,0.0013450846,0.8769262,0.00037205222,0.0013131748,0.000047876794,0.0006628631,0.0032082703,0.000024877869,0.11437727,0.00017728779,0.00021718183],"about_ca_topic_score_codex":0.00021491657,"about_ca_topic_score_gemma":0.00067451905,"teacher_disagreement_score":0.11464777,"about_ca_system_score_codex":0.00022952573,"about_ca_system_score_gemma":0.00046905805,"threshold_uncertainty_score":0.9531807},"labels":[],"label_agreement":null},{"id":"W4396529686","doi":"10.1172/jci180512","title":"Enhancing anticancer activity of macrophages through rational drug combinations","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune cells in cancer","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire de Sherbrooke; Université de Sherbrooke","funders":"National Cancer Institute; Fonds de Recherche du Québec - Santé; Natural Sciences and Engineering Research Council of Canada; Université de Sherbrooke","keywords":"Drug; Anticancer drug; Pharmacology; Chemistry; Computational biology; Biology","score_opus":0.05411144145638554,"score_gpt":0.38596242424813554,"score_spread":0.33185098279175,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396529686","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9819308,0.005228459,0.0034417831,0.002867614,0.00590036,0.00009258997,0.000011001775,0.000018442632,0.0005089566],"genre_scores_gemma":[0.99644166,0.00050646183,0.001516414,0.00021586697,0.00023021668,0.0000024084468,0.0000091705815,0.000011540943,0.0010662364],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980369,0.00040940504,0.0011854769,0.00013903936,0.00010714909,0.00012199863],"domain_scores_gemma":[0.99719507,0.0016354341,0.0006784514,0.00012760045,0.000341323,0.000022138142],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016571668,0.00009758086,0.00037972597,0.00008804394,0.00006945298,0.000020725302,0.00015843408,0.00017182878,0.00037851866],"category_scores_gemma":[0.0010088914,0.00008049557,0.00022902276,0.00020012437,0.00054623233,0.00045597693,0.000035284767,0.00068195816,0.00005891934],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015719119,0.0002651785,0.0034635677,0.00016048916,0.0005122831,0.000009953748,0.0011053002,0.00010239797,0.9561783,0.012279354,0.016015276,0.009750725],"study_design_scores_gemma":[0.0010357914,0.0002141776,0.018736256,0.00044384977,0.00013715083,0.000043055057,0.0000731139,0.00007817694,0.95239395,0.015261042,0.011478451,0.00010501314],"about_ca_topic_score_codex":0.000020280218,"about_ca_topic_score_gemma":0.000007660396,"teacher_disagreement_score":0.015272688,"about_ca_system_score_codex":0.000049776158,"about_ca_system_score_gemma":0.0005599952,"threshold_uncertainty_score":0.4144514},"labels":[],"label_agreement":null},{"id":"W4396530381","doi":"10.1172/jci176474","title":"Induction of antiviral interferon-stimulated genes by neuronal STING promotes the resolution of pain in mice","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotchkiss Brain Institute; Alberta Children's Hospital; University of Calgary","funders":"Canadian Institutes of Health Research; Alberta Children's Hospital Research Institute; Crohn's and Colitis Canada; Agence Nationale de la Recherche; Canadian Association of Gastroenterology","keywords":"Sting; Stimulator of interferon genes; Nociceptor; Inflammation; Dorsal root ganglion; Hyperalgesia; Nociception; Interferon; Cell biology; Medicine; Immunology; Neuroscience; Biology; Receptor; Spinal cord; Innate immune system; Immune system; Internal medicine","score_opus":0.06284313801702422,"score_gpt":0.3483504577478099,"score_spread":0.2855073197307857,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396530381","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99392605,0.003334617,0.00045524267,0.0011204932,0.0010254127,0.00009866558,0.000005914214,0.000008040145,0.000025566253],"genre_scores_gemma":[0.9994694,0.00014431599,0.00012057417,0.000062096056,0.00006676186,9.4522625e-7,0.000012302253,0.000008118966,0.0001155137],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9963707,0.0017917734,0.00154688,0.00011247803,0.0000653682,0.00011281831],"domain_scores_gemma":[0.99750787,0.0015179919,0.000701341,0.00008057336,0.00017930112,0.000012950564],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0043469197,0.00009079037,0.00032279434,0.00015995656,0.000030681596,0.00001142676,0.00015107433,0.00020319958,0.000024186475],"category_scores_gemma":[0.002736751,0.000060487517,0.0001480771,0.00020807322,0.0004142929,0.00019765826,0.000033335986,0.0006540163,0.000005143821],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00081100076,0.000096507094,0.003921374,0.00005464658,0.00010182477,0.0000016203479,0.00037440026,0.000059080623,0.9562422,0.000114320406,0.001513508,0.036709495],"study_design_scores_gemma":[0.0011610015,0.003908174,0.03823124,0.0013923505,0.00009036034,0.000059502054,0.00037351093,0.0034969274,0.94801563,0.0008166647,0.0023366108,0.00011803695],"about_ca_topic_score_codex":0.000042111318,"about_ca_topic_score_gemma":0.0000061705155,"teacher_disagreement_score":0.036591455,"about_ca_system_score_codex":0.000021648675,"about_ca_system_score_gemma":0.000159879,"threshold_uncertainty_score":0.32763442},"labels":[],"label_agreement":null},{"id":"W4396530801","doi":"10.1172/jci177726","title":"Gravi-D peptide disrupts HDAC11 association with an AKAP to stimulate adipocyte thermogenic signaling","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Adipose Tissue and Metabolism","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; National Institutes of Health; Colorado Clinical and Translational Sciences Institute; American Heart Association","keywords":"Adipocyte; Association (psychology); Cell biology; Internal medicine; Chemistry; Endocrinology; Biology; Psychology; Medicine; Adipose tissue","score_opus":0.07358004837821382,"score_gpt":0.4000688432518195,"score_spread":0.3264887948736057,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396530801","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9922339,0.0008291134,0.001423023,0.0042720344,0.0007510505,0.00023716185,0.0000036680824,0.000047709444,0.00020238073],"genre_scores_gemma":[0.98551476,0.00008774052,0.008115499,0.0019707405,0.002559789,0.0000030405527,0.000013635242,0.00003968242,0.0016951237],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9973276,0.00025554682,0.0012625117,0.00023168305,0.0007037103,0.00021891028],"domain_scores_gemma":[0.99754417,0.00055753207,0.0005731924,0.00018078426,0.00046691962,0.0006774319],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029897739,0.00015882571,0.0005795453,0.00018580684,0.00005500476,0.00008025077,0.0001045767,0.00019205287,0.00008102477],"category_scores_gemma":[0.0015594754,0.000109417546,0.00023460196,0.00035946487,0.000055595443,0.00045070134,0.000015773545,0.0007049834,0.00006366457],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006368972,0.0011245778,0.43676105,0.00065246515,0.0053028585,0.0023470374,0.009809695,0.0058282823,0.28030443,0.00450842,0.017408129,0.22958408],"study_design_scores_gemma":[0.0073425868,0.012542586,0.8075039,0.00458092,0.00676,0.0007722912,0.00034577606,0.00911972,0.042644065,0.015181992,0.09232934,0.00087686646],"about_ca_topic_score_codex":0.00001287651,"about_ca_topic_score_gemma":0.000009683526,"teacher_disagreement_score":0.37074283,"about_ca_system_score_codex":0.00010471785,"about_ca_system_score_gemma":0.00048214948,"threshold_uncertainty_score":0.44619182},"labels":[],"label_agreement":null},{"id":"W4396905245","doi":"10.1172/jci176910","title":"Fibulin-2 is an extracellular matrix inhibitor of oligodendrocytes relevant to multiple sclerosis","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotchkiss Brain Institute; University of Toronto; University of Victoria; University of Saskatchewan; University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Remyelination; Multiple sclerosis; Oligodendrocyte; Myelin; Biology; Neuroscience; Extracellular matrix; Regeneration (biology); Immunology; Medicine; Central nervous system; Cell biology","score_opus":0.09745320419922626,"score_gpt":0.383863121787192,"score_spread":0.28640991758796575,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396905245","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934143,0.002484172,0.0023952273,0.0012666755,0.00031445216,0.00009708225,0.000011707387,0.0000052081596,0.000011193033],"genre_scores_gemma":[0.9894948,0.0005466483,0.008100151,0.00018783456,0.0009856505,0.0000018661289,0.000011214138,0.00001718667,0.00065464847],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99813205,0.00015480808,0.0010411943,0.00020143029,0.00031792914,0.00015260444],"domain_scores_gemma":[0.99876404,0.00014964488,0.0002519829,0.00019232015,0.00028286633,0.00035916307],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015855546,0.000094707044,0.0002505285,0.00009849542,0.00003231251,0.000049070237,0.0001849112,0.0001687528,0.000017274286],"category_scores_gemma":[0.0018426647,0.000076687,0.00021671967,0.00014444986,0.00009728931,0.000023464645,0.00005271567,0.00025565145,0.000013949767],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001772212,0.00005192157,0.0051633455,0.0000523753,0.000054501885,0.000009657825,0.000076103905,0.00016446257,0.98403025,0.00006315085,0.0043663234,0.0057906597],"study_design_scores_gemma":[0.0005431913,0.002059096,0.006673286,0.0003928575,0.000036221394,0.000020986583,0.000073069605,0.005651938,0.97496504,0.00030453247,0.009157974,0.00012183515],"about_ca_topic_score_codex":0.000015355663,"about_ca_topic_score_gemma":0.000009556615,"teacher_disagreement_score":0.009065265,"about_ca_system_score_codex":0.000012301561,"about_ca_system_score_gemma":0.00024684766,"threshold_uncertainty_score":0.3127205},"labels":[],"label_agreement":null},{"id":"W4398155824","doi":"10.1172/jci180012","title":"Unveiling the proteome-wide autoreactome enables enhanced evaluation of emerging CAR T cell therapies in autoimmunity","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Center for Advancing Translational Sciences; Janssen Biotech; National Institute of Neurological Disorders and Stroke; National Institute of General Medical Sciences; Gilead Sciences; National Cancer Institute; National Institute on Aging; Eurostars; Larry L. Hillblom Foundation; Genentech; Celgene; Centers for Disease Control and Prevention; University of California, San Francisco; Swedish Orphan Biovitrum; Springworks Therapeutics; Rare Diseases Clinical Research Network; National Institute of Allergy and Infectious Diseases; Angiocrine Bioscience; Alexion Pharmaceuticals; Kite Pharma; Bristol-Myers Squibb; National Institutes of Health; Legend Biotech; Argenx; GlaxoSmithKline; Amgen; National Institute of Child Health and Human Development; National Institute of Arthritis and Musculoskeletal and Skin Diseases; Sanofi; MorphoSys; Juno Therapeutics","keywords":"Autoantibody; Autoimmunity; Immunology; Proteome; Computational biology; Epitope; Medicine; Disease; Antibody; Biology; Bioinformatics; Internal medicine","score_opus":0.14900847362975833,"score_gpt":0.45288601287909586,"score_spread":0.3038775392493375,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4398155824","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98781437,0.003715304,0.000102382364,0.006901651,0.0003708296,0.00036263478,0.0000019252332,0.000009966493,0.0007209402],"genre_scores_gemma":[0.99772376,0.00061895803,0.0007153674,0.00020174943,0.0003890733,0.000009024821,0.0000063220523,0.000012146892,0.00032360488],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9963646,0.00082703563,0.001460901,0.00012813053,0.001060868,0.00015844546],"domain_scores_gemma":[0.99679935,0.0017562244,0.00047338623,0.00015780618,0.00070375315,0.000109492175],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.01106293,0.00010730969,0.00042106098,0.00022298894,0.000055367687,0.000032757733,0.00015060657,0.000112350055,0.00012543758],"category_scores_gemma":[0.003221398,0.00006161235,0.0002410625,0.0004231681,0.00028582386,0.00022159818,0.000033832977,0.0009562065,0.0000086103955],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015888647,0.00075291796,0.19681941,0.0019808202,0.0007442895,0.00008902524,0.015333023,0.003006906,0.60275865,0.00096535584,0.0017456212,0.17421512],"study_design_scores_gemma":[0.0025396957,0.0012670328,0.7343392,0.002991102,0.00039334016,0.000041206542,0.0016019293,0.058237143,0.17521793,0.017160514,0.006016814,0.00019410554],"about_ca_topic_score_codex":0.00010433827,"about_ca_topic_score_gemma":0.000016695923,"teacher_disagreement_score":0.53751975,"about_ca_system_score_codex":0.00007822572,"about_ca_system_score_gemma":0.0011166146,"threshold_uncertainty_score":0.41542947},"labels":[],"label_agreement":null},{"id":"W4398765485","doi":"10.1172/jci180080","title":"Spatial and functional targeting of intratumoral Tregs reverses CD8+ T cell exhaustion and promotes cancer immunotherapy","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cancer, Stress, Anesthesia, and Immune Response","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Cancer Institute; National Institutes of Health; National Institute of Allergy and Infectious Diseases; Pelotonia; Eli Lilly and Company","keywords":"Immunotherapy; Cancer immunotherapy; CD8; Cancer research; Cytotoxic T cell; Immunology; Cancer; Medicine; Biology; Immune system; Internal medicine; Genetics","score_opus":0.04793135724547782,"score_gpt":0.3479394220882325,"score_spread":0.30000806484275466,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4398765485","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9836424,0.012866437,0.00021584911,0.0023624434,0.000747412,0.00012011401,0.0000029592707,0.000014697766,0.00002770872],"genre_scores_gemma":[0.9911324,0.0057740873,0.0009496177,0.00016433443,0.0017815777,0.0000027401063,0.000005470905,0.000017776187,0.0001720462],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984689,0.00013558065,0.0009243939,0.00013552286,0.00024493516,0.00009066894],"domain_scores_gemma":[0.9987484,0.00041605215,0.00045540664,0.000061435436,0.00020434943,0.00011432336],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010532549,0.00010155719,0.0003889281,0.000115344694,0.00003369626,0.00003394208,0.00002622509,0.00011138452,0.000050576902],"category_scores_gemma":[0.0005219432,0.000077040444,0.00012212383,0.000109998895,0.0002980553,0.00022456067,0.000009305843,0.0003576683,5.7032696e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009060971,0.00034832757,0.2524694,0.0017456685,0.00044698428,0.00010130883,0.0019552654,0.0000592447,0.495002,0.0001967975,0.011244908,0.22736911],"study_design_scores_gemma":[0.006104177,0.00417582,0.868871,0.004207714,0.0006898311,0.00059505575,0.0007259014,0.005924724,0.08930395,0.0019192629,0.017167425,0.00031518537],"about_ca_topic_score_codex":0.000102317026,"about_ca_topic_score_gemma":0.000006605887,"teacher_disagreement_score":0.61640155,"about_ca_system_score_codex":0.000032013715,"about_ca_system_score_gemma":0.00047454183,"threshold_uncertainty_score":0.3141618},"labels":[],"label_agreement":null},{"id":"W4399391820","doi":"10.1172/jci177142","title":"Off-target autophagy inhibition by SHP2 allosteric inhibitors contributes to their antitumor activity in RAS-driven cancers","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Cancer Research","funders":"National Cancer Institute; National Institutes of Health","keywords":"Allosteric regulation; Autophagy; MAPK/ERK pathway; Cancer research; Kinase; Signal transduction; Cancer; Biology; Enzyme; Cell biology; Biochemistry; Genetics","score_opus":0.040283755030534614,"score_gpt":0.36921816522349443,"score_spread":0.3289344101929598,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399391820","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.986037,0.002310992,0.0006418532,0.009274102,0.0012480516,0.00034621824,0.000024010698,0.000037853217,0.000079914535],"genre_scores_gemma":[0.99492633,0.00047255424,0.00039334933,0.0032888781,0.00074636075,0.000010641591,0.000023592964,0.00002391058,0.00011436344],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977287,0.0002635685,0.0012213272,0.00024329095,0.0003337033,0.00020940148],"domain_scores_gemma":[0.9984721,0.00044658154,0.0003873935,0.0001398484,0.00018116273,0.00037289798],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013565056,0.00017134378,0.0006333426,0.0002682376,0.000036998586,0.000056991536,0.000080510996,0.00018728532,0.00004980449],"category_scores_gemma":[0.00075105875,0.000131309,0.0002782066,0.00049068365,0.0001529586,0.00040891144,0.000026402871,0.00062325835,0.000017458362],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003888759,0.0012397266,0.12425887,0.00054569024,0.0010922021,0.0012034732,0.0012881455,0.0008842827,0.67646927,0.001028185,0.09476052,0.09334086],"study_design_scores_gemma":[0.008035557,0.003198212,0.34293562,0.004805043,0.00032682496,0.00010668801,0.00015654096,0.013752751,0.57552296,0.012039048,0.038656197,0.00046455688],"about_ca_topic_score_codex":0.000026161119,"about_ca_topic_score_gemma":0.000012619693,"teacher_disagreement_score":0.21867676,"about_ca_system_score_codex":0.0002775994,"about_ca_system_score_gemma":0.00083383365,"threshold_uncertainty_score":0.53546256},"labels":[],"label_agreement":null},{"id":"W4399625542","doi":"10.1172/jci165814","title":"C16ORF70/MYTHO promotes healthy aging in C.elegans and prevents cellular senescence in mammals","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Medical Research Council; Associazione Italiana per la Ricerca sul Cancro; NextGenerationEU; Ministero della Salute; National Institute on Aging; Deutsche Forschungsgemeinschaft; Wellcome Trust; Francis Crick Institute; National Institutes of Health; Cancer Research UK; Fondazione AIRC per la ricerca sul cancro ETS","keywords":"Autophagy; Biology; Caenorhabditis elegans; Downregulation and upregulation; Cell biology; Senescence; Gene; Ageing; Oxidative stress; Autophagosome; Genetics; Apoptosis; Biochemistry","score_opus":0.04318521805413236,"score_gpt":0.3534587506719208,"score_spread":0.31027353261778845,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399625542","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9917252,0.0025203768,0.0032967348,0.0018945527,0.00041367847,0.0001275611,0.0000015149253,0.000004205336,0.00001617121],"genre_scores_gemma":[0.9946718,0.00092611497,0.0033198113,0.0005554934,0.00044751033,0.000001839418,0.000006011147,0.000015302889,0.000056115234],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99816597,0.0002810526,0.0009829428,0.00023872631,0.00016539273,0.00016590381],"domain_scores_gemma":[0.9993715,0.00007746499,0.0002350821,0.000121718505,0.000060151055,0.0001340577],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021562607,0.0001098149,0.00024820195,0.000111725574,0.000021320004,0.00004875791,0.000118326556,0.00017831089,0.0000031297113],"category_scores_gemma":[0.0004779702,0.00010092973,0.00007567501,0.00012283488,0.00012273896,0.000020018531,0.00004696414,0.0003575857,0.0000019286413],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000076166485,0.00016318998,0.47938603,0.00034699554,0.000043827724,0.00010305284,0.0013300542,0.00036201626,0.508591,0.0001423534,0.0002819063,0.0091734305],"study_design_scores_gemma":[0.0036551333,0.0031032793,0.4166287,0.0023730262,0.00012687822,0.00026378152,0.0004178831,0.013945036,0.5291968,0.021641865,0.007808328,0.00083930045],"about_ca_topic_score_codex":0.000022483102,"about_ca_topic_score_gemma":0.00006375428,"teacher_disagreement_score":0.06275734,"about_ca_system_score_codex":0.000017174669,"about_ca_system_score_gemma":0.00023735836,"threshold_uncertainty_score":0.4115795},"labels":[],"label_agreement":null},{"id":"W4399727957","doi":"10.1172/jci171136","title":"Triptolide and its prodrug Minnelide target high-risk MYC-amplified medulloblastoma in preclinical models","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Natural Compounds in Disease Treatment","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children’s Health Research Institute","funders":"National Institute of Neurological Disorders and Stroke; National Cancer Institute; Vince Lombardi Cancer Foundation; Hollings Cancer Center, Medical University of South Carolina; National Institutes of Health; Southeastern Brain Tumor Foundation; American Lebanese Syrian Associated Charities; Foundation for the National Institutes of Health; American Cancer Society; Alex's Lemonade Stand Foundation for Childhood Cancer; V Foundation for Cancer Research; College of Graduate Studies, Medical University of South Carolina; Rally Foundation; Southern Regional Education Board","keywords":"Triptolide; Medulloblastoma; Cancer research; In vivo; Medicine; Drug; Pharmacology; Toxicity; Oncology; Internal medicine; Biology; Apoptosis","score_opus":0.10741417624192191,"score_gpt":0.41141428999345653,"score_spread":0.30400011375153463,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399727957","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9813263,0.0058286595,0.00022989103,0.010941848,0.0011268894,0.0003748942,0.000014440422,0.00004690672,0.00011021189],"genre_scores_gemma":[0.9864518,0.0008485552,0.010720578,0.0006687974,0.0009624858,0.0000108187005,0.000016276446,0.00003059757,0.0002900868],"study_design_codex":"observational","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9957449,0.0005029285,0.0025052356,0.00039173884,0.0006217859,0.00023342835],"domain_scores_gemma":[0.99624926,0.0019484657,0.0006729982,0.00022000218,0.0002680408,0.0006412616],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0030803918,0.00022356222,0.00088332477,0.0003709571,0.000040139737,0.00006695269,0.00013439562,0.0002869956,0.00004397097],"category_scores_gemma":[0.0050737136,0.00015960162,0.00032874788,0.00043206222,0.00017354487,0.0005186501,0.000057244393,0.0013835888,0.00001819304],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.027196992,0.007076707,0.56353235,0.003636084,0.0061492533,0.008817932,0.0044923155,0.009063494,0.0071339305,0.03823871,0.07486067,0.24980155],"study_design_scores_gemma":[0.015135219,0.005023652,0.3772804,0.00488785,0.0020600036,0.00077267137,0.0001168942,0.1155964,0.005753846,0.46979582,0.0029517254,0.0006255008],"about_ca_topic_score_codex":0.000015367608,"about_ca_topic_score_gemma":0.000009319222,"teacher_disagreement_score":0.43155712,"about_ca_system_score_codex":0.00013881252,"about_ca_system_score_gemma":0.0006116918,"threshold_uncertainty_score":0.6508365},"labels":[],"label_agreement":null},{"id":"W4401169155","doi":"10.1172/jci168789","title":"Human milk antibodies to global pathogens reveal geographic and interindividual variations in IgA and IgG","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"National Institute of Environmental Health Sciences; National Institute of Allergy and Infectious Diseases; Medical Center, University of Rochester; University of Rochester; Bill and Melinda Gates Foundation","keywords":"Antibody; Immunology; Immunoglobulin A; Immunoglobulin G; Biology; Virology","score_opus":0.10409614740750149,"score_gpt":0.451682176189402,"score_spread":0.3475860287819005,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401169155","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9847665,0.00061230623,0.00024133812,0.013961187,0.00021250358,0.00011692876,0.000020477004,0.000008965992,0.000059820744],"genre_scores_gemma":[0.9933515,0.0004396591,0.00471137,0.0010812568,0.00037420535,0.0000022778431,0.000008404484,0.0000055187616,0.000025815205],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981959,0.00028129536,0.0010034755,0.00016823508,0.00017686885,0.00017423111],"domain_scores_gemma":[0.9991682,0.00011962505,0.00012976008,0.00006866299,0.00010473162,0.00040899758],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021953657,0.000081908176,0.00040741175,0.00020663257,0.0000367936,0.00004537017,0.000049702947,0.0001002563,0.000009464473],"category_scores_gemma":[0.0026446308,0.00006460418,0.00009017516,0.00019103449,0.00024415358,0.00014832811,0.00006381311,0.00042119925,0.0000025661536],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010432958,0.00004161115,0.98321396,0.000085674255,0.00007165024,0.00017277632,0.00010956773,0.0000034612049,0.0028788473,0.0007832817,0.002166663,0.010368186],"study_design_scores_gemma":[0.0007274686,0.0016896231,0.9872652,0.0006505376,0.000048509162,0.00036637622,0.000048437843,0.0002887499,0.000009687578,0.008258011,0.0006037036,0.000043638796],"about_ca_topic_score_codex":0.000043653832,"about_ca_topic_score_gemma":0.00009641204,"teacher_disagreement_score":0.0128799295,"about_ca_system_score_codex":0.000025428135,"about_ca_system_score_gemma":0.000088172215,"threshold_uncertainty_score":0.3166061},"labels":[],"label_agreement":null},{"id":"W4401169446","doi":"10.1172/jci176344","title":"Convergent generation of atypical prions in knockin mouse models of genetic prion disease","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Prion Diseases and Protein Misfolding","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada; University of Toronto","funders":"National Institute of Neurological Disorders and Stroke; Canadian Institutes of Health Research","keywords":"Disease; Biology; Virology; Genetics; Medicine; Pathology","score_opus":0.09644045760926259,"score_gpt":0.36954299019667064,"score_spread":0.273102532587408,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401169446","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98171324,0.0084191505,0.0090732165,0.00036932394,0.00027008832,0.00013465756,0.000012828166,0.0000024741155,0.0000050320637],"genre_scores_gemma":[0.9921241,0.004462545,0.0028886439,0.00008809579,0.00037715404,0.0000033385045,0.000025312263,0.0000105412,0.000020281092],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980956,0.00020587508,0.0012507272,0.00015430004,0.00020889183,0.000084629464],"domain_scores_gemma":[0.9990184,0.000053395488,0.00041380382,0.00014768861,0.00017864634,0.0001880691],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00072123605,0.000081530525,0.00022149672,0.000087319146,0.000013354867,0.000012360095,0.000111258734,0.00012458651,0.000016723696],"category_scores_gemma":[0.0006930943,0.0000710649,0.00022943894,0.00010843986,0.00010173114,0.000018757517,0.00003923613,0.00014485515,9.43593e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010292163,0.00043134196,0.07387686,0.00040132963,0.00017656585,0.000028079061,0.00012853589,0.043225367,0.82805157,0.0020228713,0.0016735375,0.048954703],"study_design_scores_gemma":[0.0031701315,0.0021581734,0.24626595,0.0012853809,0.00039308,0.000024737157,0.00005812952,0.30382717,0.4147469,0.022823798,0.0047343625,0.00051216595],"about_ca_topic_score_codex":0.000005640985,"about_ca_topic_score_gemma":0.000006735799,"teacher_disagreement_score":0.4133047,"about_ca_system_score_codex":0.000013461583,"about_ca_system_score_gemma":0.00045045413,"threshold_uncertainty_score":0.28979424},"labels":[],"label_agreement":null},{"id":"W4401567774","doi":"10.1172/jci168393","title":"MNK-driven eIF4E phosphorylation regulates the fibrogenic transformation of mesenchymal cells and chronic lung allograft dysfunction","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Transplantation: Methods and Outcomes","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"NIH Office of the Director; National Cancer Institute; National Heart, Lung, and Blood Institute; Cystic Fibrosis Foundation","keywords":"Mesenchymal stem cell; Phosphorylation; Lung; Transformation (genetics); Cancer research; Cell biology; Medicine; Biology; Immunology; Internal medicine; Gene; Biochemistry","score_opus":0.047008966133106705,"score_gpt":0.3711199469621919,"score_spread":0.3241109808290852,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401567774","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9770043,0.0026303774,0.014302885,0.0048127836,0.00086328696,0.0002779536,0.0000058410083,0.000022155264,0.00008043529],"genre_scores_gemma":[0.9911434,0.0017955541,0.006285663,0.00014812898,0.000513864,0.0000024383437,0.000019495063,0.00001287456,0.00007860022],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99776095,0.0002535486,0.0013856499,0.0001279329,0.00036765108,0.000104270555],"domain_scores_gemma":[0.9981995,0.0008985283,0.0004696947,0.00010714441,0.0002043631,0.000120753415],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020163595,0.00011274383,0.00037142448,0.00013145134,0.00005843375,0.00003764372,0.000057944595,0.00016190662,0.0000315978],"category_scores_gemma":[0.00020333924,0.00006998851,0.00027609768,0.0002448178,0.00020972168,0.00042009188,0.000005601227,0.00040134828,0.000002487395],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026544947,0.000265777,0.16182224,0.0053706784,0.0022438036,0.000066517285,0.010686482,0.005153739,0.4963801,0.016189253,0.0030362513,0.29613066],"study_design_scores_gemma":[0.0038229995,0.0020111285,0.6434057,0.00236702,0.0024997587,0.00038815464,0.00037154078,0.13615829,0.1972737,0.00787072,0.0035889505,0.00024207958],"about_ca_topic_score_codex":0.000008535762,"about_ca_topic_score_gemma":0.0000075333705,"teacher_disagreement_score":0.48158342,"about_ca_system_score_codex":0.000046403937,"about_ca_system_score_gemma":0.00028134204,"threshold_uncertainty_score":0.28540486},"labels":[],"label_agreement":null},{"id":"W4402042938","doi":"10.1172/jci180983","title":"Parkin activates innate immunity and promotes antitumor immune responses","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune cells in cancer","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"U.S. National Library of Medicine; National Cancer Institute; National Institutes of Health","keywords":"Parkin; Biology; Ubiquitin ligase; Tumor microenvironment; Innate immune system; Cell biology; Cytotoxic T cell; Immune system; Cancer research; Immunology; Ubiquitin; Medicine","score_opus":0.06627815754238557,"score_gpt":0.37380248209177835,"score_spread":0.30752432454939277,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402042938","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.968538,0.025557995,0.00004741745,0.0023978995,0.0031659673,0.000103493854,0.0000053795397,0.00003469105,0.00014915846],"genre_scores_gemma":[0.99660796,0.001544766,0.0005424585,0.00018776796,0.00017711139,0.0000025326815,0.000009021464,0.000017277831,0.0009110976],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99734575,0.00092521805,0.0013270119,0.00016464965,0.000064310574,0.00017309161],"domain_scores_gemma":[0.9969931,0.0020708202,0.0005501666,0.00017892146,0.00016689677,0.000040073202],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0035861598,0.00013845188,0.00044734965,0.00016696811,0.0001099063,0.000064426284,0.00019336739,0.00026773207,0.00013326653],"category_scores_gemma":[0.0031410623,0.000104486324,0.00016350894,0.0001844724,0.0007597142,0.00038871783,0.000083408675,0.0011657208,0.000059757673],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00075475633,0.0001007182,0.01566152,0.00012272516,0.0005482309,0.000045480578,0.00064247753,0.0000028439324,0.94575346,0.000857139,0.0031651002,0.03234554],"study_design_scores_gemma":[0.001397751,0.0010011353,0.17738506,0.0010422476,0.0002038429,0.0005469118,0.00015643012,0.000046832676,0.7545201,0.010069376,0.053391498,0.00023880006],"about_ca_topic_score_codex":0.000022148655,"about_ca_topic_score_gemma":0.000001466662,"teacher_disagreement_score":0.19123335,"about_ca_system_score_codex":0.000029239134,"about_ca_system_score_gemma":0.00033894897,"threshold_uncertainty_score":0.5064541},"labels":[],"label_agreement":null},{"id":"W4402124489","doi":"10.1172/jci178573","title":"Increased risk of kidney failure in patients with genetic kidney disorders","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Renal Diseases and Glomerulopathies","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Center for Advancing Translational Sciences; U.S. National Library of Medicine; Nephcure Foundation; National Human Genome Research Institute; National Institutes of Health; National Institute of Diabetes and Digestive and Kidney Diseases; U.S. Department of Defense","keywords":"Kidney; Medicine; Bioinformatics; Internal medicine; Biology; Intensive care medicine","score_opus":0.015145127358249572,"score_gpt":0.30380907595398515,"score_spread":0.2886639485957356,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402124489","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959666,0.00036302183,0.0001047595,0.0030852086,0.00021176664,0.00016751184,0.000026397998,0.000008144884,0.0000665707],"genre_scores_gemma":[0.99621904,0.0004418293,0.0021217493,0.0009630169,0.00019998102,0.0000016751023,0.00002170515,0.000014890445,0.000016123668],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979124,0.00020596135,0.0011907399,0.00013484685,0.00044921366,0.00010681879],"domain_scores_gemma":[0.9980645,0.0002127607,0.0005442455,0.000128882,0.00022979506,0.00081977743],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006836711,0.000105745785,0.0004289188,0.00020605678,0.000015663607,0.000018017357,0.00006301478,0.00010151046,0.00003769414],"category_scores_gemma":[0.0070689395,0.000067339206,0.000214226,0.00033964874,0.00019714872,0.00016129186,0.000012912498,0.0004452647,0.000005335175],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006272714,0.00023185553,0.98854536,0.00035742755,0.00013573104,0.000019333407,0.0000775265,0.00004272075,0.000045968623,0.000037150647,0.0046829022,0.0051967795],"study_design_scores_gemma":[0.0029939665,0.0015740738,0.9875471,0.0026647996,0.00040066335,0.0000043391597,0.000027606646,0.00060926244,0.00005538782,0.002367982,0.0016822004,0.000072622126],"about_ca_topic_score_codex":0.000049987848,"about_ca_topic_score_gemma":0.000012062469,"teacher_disagreement_score":0.0063852686,"about_ca_system_score_codex":0.000023382056,"about_ca_system_score_gemma":0.0010193174,"threshold_uncertainty_score":0.8462692},"labels":[],"label_agreement":null},{"id":"W4402759024","doi":"10.1172/jci181095","title":"Stimulation of an entorhinal-hippocampal extinction circuit facilitates fear extinction in a post-traumatic stress disorder model","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Memory and Neural Mechanisms","field":"Neuroscience","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mental Health Research Canada; Hospital for Sick Children; University of Toronto","funders":"Science and Technology Commission of Shanghai Municipality; National Natural Science Foundation of China; Shanghai Municipal Health Commission","keywords":"Extinction (optical mineralogy); Neuroscience; Stimulation; Hippocampal formation; Traumatic stress; Psychology; Entorhinal cortex; Medicine; Clinical psychology; Physics; Optics","score_opus":0.21751263165042653,"score_gpt":0.4092692012938647,"score_spread":0.19175656964343815,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402759024","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99218374,0.000074162555,0.006156666,0.00029204256,0.00096349337,0.00023289284,0.000014001801,0.000032771768,0.000050227427],"genre_scores_gemma":[0.9989575,0.000078595134,0.00052716775,0.00016181407,0.00019231203,0.000004651347,0.000008218642,0.00001627753,0.000053421503],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99639165,0.0007563742,0.0018001246,0.0003089382,0.0005768981,0.00016600231],"domain_scores_gemma":[0.997728,0.0010430714,0.0007095002,0.00016561456,0.00017223212,0.0001816097],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020653268,0.00015292683,0.00037082622,0.00030999552,0.00006024688,0.00007567981,0.00017686101,0.00016826269,0.000090577814],"category_scores_gemma":[0.0037323232,0.00012879202,0.00018033508,0.00039886197,0.00013388944,0.0015276208,0.000020879395,0.0005720766,0.000014952699],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042966745,0.0005590046,0.0034854386,0.00031848872,0.000015858566,0.000036644273,0.0037911872,0.06746688,0.87652934,0.00113122,0.000015104537,0.046221152],"study_design_scores_gemma":[0.00083253614,0.0017510753,0.02019625,0.0004438719,0.000060679944,0.00004920886,0.0006065443,0.71734136,0.2016221,0.056908425,0.000014199955,0.00017376304],"about_ca_topic_score_codex":0.000009313228,"about_ca_topic_score_gemma":0.000033792236,"teacher_disagreement_score":0.67490727,"about_ca_system_score_codex":0.00004838975,"about_ca_system_score_gemma":0.00017820526,"threshold_uncertainty_score":0.52519864},"labels":[],"label_agreement":null},{"id":"W4402968553","doi":"10.1172/jci178604","title":"Genomic and transcriptomic features of androgen receptor signaling inhibitor resistance in metastatic castration-resistant prostate cancer","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Movember Foundation; National Cancer Institute; Stand Up To Cancer; Prostate Cancer Foundation","keywords":"Prostate cancer; Androgen receptor; Transcriptome; Cancer research; Medicine; Receptor; Castration; Biology; Bioinformatics; Oncology; Internal medicine; Cancer; Genetics; Gene; Hormone; Gene expression","score_opus":0.08180279273391518,"score_gpt":0.39974987060513373,"score_spread":0.31794707787121856,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402968553","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96556747,0.029449197,0.000009624812,0.0042651277,0.00029892716,0.00032777627,0.000033463017,0.000007012403,0.00004141475],"genre_scores_gemma":[0.9923495,0.0038006173,0.0030099421,0.000088788285,0.0002551642,0.000011145893,0.000011866469,0.000016986942,0.0004560112],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99794227,0.00017397945,0.001233459,0.00017890117,0.00032747476,0.00014394609],"domain_scores_gemma":[0.9988846,0.0003286705,0.00031677552,0.000075668286,0.00020840722,0.00018583515],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014210021,0.0001124751,0.0004812773,0.00021919615,0.000027638536,0.000040536983,0.000049624232,0.00007396973,0.000024410207],"category_scores_gemma":[0.0002630636,0.00007937479,0.00013278582,0.00027006285,0.00023332094,0.00020785678,0.000007928179,0.00043983568,0.0000010371473],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005798401,0.0001843243,0.07913361,0.0020317778,0.0005859943,0.00028818194,0.0035573295,0.00006631727,0.89378864,0.00040305965,0.0026116536,0.01155075],"study_design_scores_gemma":[0.016077138,0.0036455004,0.5834237,0.015216304,0.001378135,0.0001239194,0.0013403283,0.0006058619,0.35778117,0.012836883,0.007079711,0.0004913978],"about_ca_topic_score_codex":0.000040427938,"about_ca_topic_score_gemma":0.00013051544,"teacher_disagreement_score":0.53600746,"about_ca_system_score_codex":0.00011422352,"about_ca_system_score_gemma":0.0012021994,"threshold_uncertainty_score":0.323681},"labels":[],"label_agreement":null},{"id":"W4403382149","doi":"10.1172/jci172887","title":"Cannabis use disorder: from neurobiology to treatment","year":2024,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Cannabis and Cannabinoid Research","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Ontario Brain Institute; Centre for Addiction and Mental Health","funders":"University of Toronto; Indivior","keywords":"Cannabis; Neuroscience; Psychiatry; Medicine; Psychology; Bioinformatics; Biology","score_opus":0.21595075491610885,"score_gpt":0.48844354856617617,"score_spread":0.2724927936500673,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403382149","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.007769283,0.9724979,0.000013972917,0.016607756,0.0020759688,0.00084984454,0.00012625856,0.000020711903,0.00003830545],"genre_scores_gemma":[0.000015555435,0.98444486,0.00041783304,0.00089671544,0.002857358,0.00004336297,0.00013951032,0.000070103335,0.011114724],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99529403,0.00060819555,0.0029510753,0.00043625117,0.00043451396,0.00027595632],"domain_scores_gemma":[0.9969739,0.00025615192,0.0009595601,0.00042137122,0.00041121768,0.0009778438],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009845904,0.00037652146,0.0030628892,0.00044856372,0.000037958234,0.00010386638,0.00020800333,0.0005703984,0.000107633554],"category_scores_gemma":[0.003032432,0.00021808996,0.0018191673,0.00048490238,0.00019596617,0.00010043684,0.000085237225,0.0013379822,0.00020896706],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008069243,0.00015790273,0.00034601582,0.0012837253,0.00056667137,0.00021409514,0.00004797921,0.0000013312674,0.000002289065,0.000028619923,0.1848682,0.8124025],"study_design_scores_gemma":[0.0005513334,0.0030372564,0.000979563,0.0069388933,0.003537905,0.00016692169,0.000008553898,0.000008053889,0.0000024310048,0.00016626895,0.9844371,0.00016569276],"about_ca_topic_score_codex":0.0003361112,"about_ca_topic_score_gemma":0.000092446884,"teacher_disagreement_score":0.8122368,"about_ca_system_score_codex":0.00029778638,"about_ca_system_score_gemma":0.003177634,"threshold_uncertainty_score":0.88934505},"labels":[],"label_agreement":null},{"id":"W4403638688","doi":"10.1172/jci183984","title":"Attenuated kidney oxidative metabolism in young adults with type 1 diabetes","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Diabetes and associated disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Population and Public Health; University of Toronto; Centre Hospitalier Universitaire de Sherbrooke; Université de Sherbrooke","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; University of Michigan; Centers for Disease Control and Prevention; Boettcher Foundation; American Heart Association","keywords":"Oxidative metabolism; Oxidative phosphorylation; Diabetes mellitus; Metabolism; Medicine; Type 2 diabetes; Kidney; Endocrinology; Internal medicine; Biology; Physiology; Biochemistry","score_opus":0.017754214758441342,"score_gpt":0.30440841718025924,"score_spread":0.2866542024218179,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403638688","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99690497,0.0011754258,0.000025416608,0.0010096611,0.0005278542,0.00006496519,0.0000062885442,0.0000054664583,0.00027996316],"genre_scores_gemma":[0.9979382,0.00039131285,0.00049635104,0.00066047086,0.00033594997,0.0000017721219,0.000059738384,0.0000140440425,0.00010212677],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988422,0.00014180712,0.000577261,0.00015374729,0.0001514435,0.00013357484],"domain_scores_gemma":[0.9992293,0.0000621062,0.00025914045,0.00007825946,0.00022236245,0.00014880051],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007833698,0.00009246458,0.00022445449,0.00006614723,0.00001581294,0.00003896221,0.000095472125,0.00014194606,0.000011158167],"category_scores_gemma":[0.001432444,0.00006692182,0.0000945253,0.00024676498,0.000095580246,0.000019949366,0.00001895547,0.00025252454,0.0000065367935],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00060789974,0.0002926269,0.8051573,0.00012994515,0.0009680244,0.000029403707,0.000518928,0.00029427215,0.14502378,0.00030220908,0.030117258,0.01655834],"study_design_scores_gemma":[0.008328584,0.0048745577,0.78685975,0.0030390928,0.00055366504,0.000017232125,0.0007804274,0.004540297,0.13777485,0.0054472056,0.046846077,0.0009382755],"about_ca_topic_score_codex":0.000008015611,"about_ca_topic_score_gemma":0.00002632928,"teacher_disagreement_score":0.018297592,"about_ca_system_score_codex":0.000008233709,"about_ca_system_score_gemma":0.00027725534,"threshold_uncertainty_score":0.27289927},"labels":[],"label_agreement":null},{"id":"W4403852334","doi":"10.1172/jci179501","title":"Immunological and molecular features of the tumor microenvironment of long-term survivors of ovarian cancer","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cancer Immunotherapy and Biomarkers","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Women's Health Research Institute; BC Cancer Agency; Foothills Medical Centre; Vancouver General Hospital; University of Calgary; University of Victoria; University of British Columbia","funders":"Medical Research and Materiel Command; Congressionally Directed Medical Research Programs; National Cancer Institute; Instituto de Salud Carlos III; Cancer Council Tasmania; Cancer Council Victoria; National Center for Advancing Translational Sciences; Medical Research Council; Foundation Medicine; National Institutes of Health; Peter MacCallum Foundation; Canadian Institutes of Health Research; Cancer Institute NSW; Terry Fox Research Institute; Cancer Council Western Australia; Cancer Australia; Bundesministerium für Bildung und Forschung; National Institute for Health and Care Research; Cancer Council NSW; Marshfield Clinic Research Foundation; Ovarian Cancer Australia; Genome British Columbia; Fred C. and Katherine B. Andersen Foundation; Mayo Foundation for Medical Education and Research; Deutsche Forschungsgemeinschaft; VGH and UBC Hospital Foundation; Friedrich-Alexander-Universität Erlangen-Nürnberg; Cancer Council South Australia; Deutsches Krebsforschungszentrum; Cancer Council Queensland; Ministerio de Economía y Competitividad; University of Pittsburgh; Victorian Cancer Agency; National Health and Medical Research Council; AstraZeneca; Pfizer; National Center for Research Resources; BC Cancer Foundation; Oak Foundation; Cancer Research UK; Minnesota Ovarian Cancer Alliance; U.S. Department of Defense","keywords":"Term (time); Cancer; Ovarian cancer; Tumor microenvironment; Cancer research; Medicine; Oncology; Biology; Immunology; Bioinformatics; Internal medicine","score_opus":0.03837565036358295,"score_gpt":0.35037581692255637,"score_spread":0.31200016655897345,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403852334","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9841081,0.01192785,0.000042649943,0.0033683279,0.00039768545,0.00011949621,0.0000071137088,0.0000018981384,0.000026908236],"genre_scores_gemma":[0.9971042,0.0020724603,0.0003494604,0.0003446449,0.00007855308,0.000001058132,0.000001126268,0.000006494956,0.000041961055],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984464,0.00015149287,0.0009986489,0.00008733589,0.00025394495,0.00006218578],"domain_scores_gemma":[0.99889505,0.0001970683,0.0006552867,0.00012539457,0.000075820455,0.0000513948],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008804167,0.000071946924,0.00037388125,0.000051061674,0.00001163114,0.0000053769163,0.00008787245,0.00008663577,0.000051244457],"category_scores_gemma":[0.00022864097,0.000040261948,0.00026436488,0.00012396008,0.00063083327,0.000043282093,0.000027524991,0.00027821586,1.1799022e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012728422,0.00012831796,0.29697755,0.00033797824,0.00054947706,0.000026971944,0.00019968976,0.00000826561,0.6752661,0.0001279391,0.00016921165,0.024935683],"study_design_scores_gemma":[0.0008241082,0.0005059241,0.81088185,0.0010787384,0.00018809475,0.000063028565,0.000025861113,0.000012235561,0.18601415,0.0002468407,0.00012836902,0.000030774532],"about_ca_topic_score_codex":0.00007782727,"about_ca_topic_score_gemma":0.000012324828,"teacher_disagreement_score":0.51390433,"about_ca_system_score_codex":0.000025311736,"about_ca_system_score_gemma":0.00018608324,"threshold_uncertainty_score":0.23243314},"labels":[],"label_agreement":null},{"id":"W4403925108","doi":"10.1172/jci186744","title":"Hidradenitis suppurativa: key insights into treatment success and failure","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Hidradenitis Suppurativa and Treatments","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women's College Hospital; University of Toronto","funders":"Galderma; Celgene; Sanofi; Pfizer; Eli Lilly and Company","keywords":"Hidradenitis suppurativa; Key (lock); Medicine; Intensive care medicine; Computer science; Pathology; Disease; Computer security","score_opus":0.06206884094687373,"score_gpt":0.3902539223013143,"score_spread":0.3281850813544406,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403925108","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9408936,0.0023596096,0.00012661892,0.0553463,0.0006147157,0.00022096738,0.0000033896931,0.00003436204,0.00040045814],"genre_scores_gemma":[0.99438864,0.0009538576,0.0029792776,0.00005191779,0.0009896664,0.000006386173,0.000026222295,0.000022355987,0.0005817014],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99789566,0.00020780855,0.0011778668,0.00022986565,0.0003530802,0.00013570122],"domain_scores_gemma":[0.99834836,0.0005745008,0.00027721238,0.00013316037,0.0001930659,0.0004737007],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004079732,0.00019262444,0.00060472934,0.00020735658,0.00008056733,0.00011724353,0.000057227142,0.00019408116,0.00008723746],"category_scores_gemma":[0.00044386103,0.00012137736,0.00024074563,0.00023180459,0.0002667499,0.0006540824,0.000017328837,0.00037938665,0.000041929987],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009507234,0.0014901444,0.5826277,0.00077183143,0.0034191108,0.14435928,0.01908301,0.0000017912251,0.012230228,0.010305864,0.010807539,0.21395276],"study_design_scores_gemma":[0.028036922,0.034761816,0.3397935,0.008366798,0.006203133,0.26314643,0.002329426,0.0044738674,0.045654368,0.097636,0.1681421,0.0014556381],"about_ca_topic_score_codex":0.000029569625,"about_ca_topic_score_gemma":0.00004569272,"teacher_disagreement_score":0.24283421,"about_ca_system_score_codex":0.00011479142,"about_ca_system_score_gemma":0.00047461948,"threshold_uncertainty_score":0.4949625},"labels":[],"label_agreement":null},{"id":"W4404350023","doi":"10.1172/jci170669","title":"Defects in meiosis I contribute to the genesis of androgenetic hydatidiform moles","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Prenatal Screening and Diagnostics","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique; Ottawa Fertility Centre; Centre Hospitalier de l’Université de Montréal; McGill University; Concordia University; McGill University Health Centre","funders":"Faculty of Medicine and Health, University of Sydney; Hunter Medical Research Institute; Strong; Qingdao Agricultural University; Canadian Institutes of Health Research; Mitacs; McGill University Health Centre; Baystate Health; McGill University","keywords":"Meiosis; Disorders of sex development; Biology; Computational biology; Bioinformatics; Genetics; Medicine; Gene","score_opus":0.07156748703026831,"score_gpt":0.37835556330152725,"score_spread":0.3067880762712589,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404350023","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9889631,0.0025337415,0.00092451985,0.007064805,0.00028518913,0.00013436606,0.000009568707,0.000007225197,0.00007745494],"genre_scores_gemma":[0.99634445,0.0003867282,0.0020161953,0.00090091827,0.00032159037,0.0000023765103,0.0000048069965,0.0000074237705,0.000015500726],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99844843,0.00011670306,0.0009935795,0.00008770224,0.00025661616,0.00009695223],"domain_scores_gemma":[0.99764776,0.0016391036,0.00023014416,0.00011581808,0.0001657571,0.00020139458],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018221906,0.000065989065,0.00032811548,0.00011555855,0.000014821887,0.000016870981,0.00008996444,0.00008620243,0.000008248686],"category_scores_gemma":[0.0076074647,0.000039257997,0.00016081252,0.0003092424,0.0000743192,0.00006702812,0.000027149063,0.00025508017,0.000013077741],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040684154,0.00016396353,0.91894466,0.00023650519,0.00021450705,0.00013433905,0.00060096907,0.0014618171,0.0039172205,0.00079293514,0.0106393555,0.062486894],"study_design_scores_gemma":[0.0012204897,0.0013048493,0.9677148,0.0021588262,0.00035611633,0.00009407076,0.00010732702,0.0043056393,0.017434752,0.0024544762,0.0027661554,0.000082519255],"about_ca_topic_score_codex":0.00004483934,"about_ca_topic_score_gemma":0.00002757078,"teacher_disagreement_score":0.06240437,"about_ca_system_score_codex":0.000024568824,"about_ca_system_score_gemma":0.00023497341,"threshold_uncertainty_score":0.91073954},"labels":[],"label_agreement":null},{"id":"W4404745306","doi":"10.1172/jci183873","title":"Neuropilin-1 inhibition suppresses nerve growth factor signaling and nociception in pain models","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pain Mechanisms and Treatments","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Dental and Craniofacial Research; National Institute of Neurological Disorders and Stroke; National Institute of General Medical Sciences; National Institutes of Health; York University; University of Cincinnati; National Institute on Drug Abuse; National Institute of Diabetes and Digestive and Kidney Diseases; U.S. Department of Defense","keywords":"Nociceptor; Nerve growth factor; Tropomyosin receptor kinase A; Neuropilin 1; Low-affinity nerve growth factor receptor; Cell biology; Signal transduction; Nociception; Chemistry; Endosome; Receptor; Endocrinology; Internal medicine; Biology; Medicine","score_opus":0.1246719968110394,"score_gpt":0.3737778605214032,"score_spread":0.2491058637103638,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404745306","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9861613,0.00042627667,0.010928062,0.002029674,0.00026396892,0.00013117376,0.0000034452155,0.000018048679,0.000038073715],"genre_scores_gemma":[0.99420935,0.00032293133,0.0044341474,0.0005875524,0.00039181017,0.0000022596828,0.000011745166,0.000013550054,0.000026683485],"study_design_codex":"observational","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9982166,0.00036881736,0.00091296225,0.00015447683,0.00024920458,0.00009788614],"domain_scores_gemma":[0.9987288,0.0006695638,0.000229558,0.000056194254,0.00014311491,0.00017274774],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001927341,0.0000965751,0.00030057185,0.00017206889,0.000023136563,0.000047180252,0.000023365676,0.00012454634,0.000017424492],"category_scores_gemma":[0.0012611002,0.00007275987,0.00011639216,0.00015012806,0.00005614376,0.00044903462,0.000011363918,0.00039253116,0.0000032278742],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017384896,0.0016231192,0.4279596,0.0028445253,0.00073801755,0.0046745464,0.004286393,0.0029874095,0.38725743,0.015930135,0.0019184529,0.14804187],"study_design_scores_gemma":[0.00889654,0.005889002,0.20816739,0.008125137,0.00073783426,0.00050055457,0.00042815853,0.32317552,0.05581545,0.38743454,0.00032148534,0.0005083714],"about_ca_topic_score_codex":0.0000145541635,"about_ca_topic_score_gemma":0.0000028118595,"teacher_disagreement_score":0.37150443,"about_ca_system_score_codex":0.000035998375,"about_ca_system_score_gemma":0.0001476905,"threshold_uncertainty_score":0.29670614},"labels":[],"label_agreement":null},{"id":"W4405235989","doi":"10.1172/jci177429","title":"C2230, a preferential use- and state-dependent CaV2.2 channel blocker, mitigates pain behaviors across multiple pain models","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pain Mechanisms and Treatments","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Dental and Craniofacial Research; National Institute of Neurological Disorders and Stroke; National Institutes of Health; National Institute on Drug Abuse; Texas Biomedical Research Institute; Education Department of Hunan Province; York University; University of Texas Health Science Center at San Antonio; University of Florida","keywords":"Neuropathic pain; Excitatory postsynaptic potential; Medicine; Gabapentin; Calcium channel blocker; Pharmacology; Nociception; Voltage-dependent calcium channel; Neuroscience; Anesthesia; Analgesic; Chronic pain; Calcium channel; Nerve injury; Inhibitory postsynaptic potential; Internal medicine; Calcium; Psychology; Receptor","score_opus":0.12391078188786772,"score_gpt":0.3860840147306143,"score_spread":0.26217323284274663,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405235989","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98445636,0.0006102796,0.012685095,0.0012589028,0.0005769128,0.00031984143,0.000038942027,0.000049717513,0.000003940264],"genre_scores_gemma":[0.99322,0.00043934703,0.0049111275,0.0006769372,0.00038263958,0.000011657154,0.00003296765,0.000038167418,0.000287214],"study_design_codex":"observational","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9967648,0.0007651407,0.0013648447,0.00030324137,0.00052501867,0.00027696352],"domain_scores_gemma":[0.9970368,0.0015411876,0.00042111945,0.00016457823,0.00027873035,0.0005575866],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.006767948,0.00021321175,0.0005629859,0.0001150857,0.00009137884,0.00017555749,0.000079473066,0.00022448743,0.000013763084],"category_scores_gemma":[0.0027118707,0.0001580102,0.00026230243,0.00012943774,0.00016088088,0.0005139286,0.000045352837,0.00061426125,0.0000058002024],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023525804,0.002964855,0.71652013,0.0012792309,0.002886352,0.0029794523,0.0084886,0.0019494629,0.027705729,0.00053310324,0.007143608,0.2251969],"study_design_scores_gemma":[0.014534076,0.0073020696,0.16132121,0.00544264,0.0018455528,0.0005241346,0.0012316018,0.7192794,0.020315131,0.066312745,0.0010435891,0.000847852],"about_ca_topic_score_codex":0.00011011549,"about_ca_topic_score_gemma":0.00006613476,"teacher_disagreement_score":0.7173299,"about_ca_system_score_codex":0.00006359181,"about_ca_system_score_gemma":0.00022609788,"threshold_uncertainty_score":0.6443469},"labels":[],"label_agreement":null},{"id":"W4405318361","doi":"10.1172/jci178722","title":"Estimation of prevalence of autoimmune diseases in the United States using electronic health record data","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Diabetes and associated disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Population and Public Health","funders":"National Center for Advancing Translational Sciences; University of Southern California; National Institute of Environmental Health Sciences; National Institutes of Health; National Heart, Lung, and Blood Institute; Massachusetts General Hospital","keywords":"Estimation; Electronic health record; Medicine; Health records; Environmental health; Statistics; Data science; Computer science; Mathematics; Political science; Health care; Law","score_opus":0.06678148431522449,"score_gpt":0.40076999035724853,"score_spread":0.333988506042024,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405318361","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9936864,0.004043612,0.0010148349,0.0010414312,0.00010235128,0.000070584196,0.000036330155,0.0000015704783,0.0000029197545],"genre_scores_gemma":[0.9954951,0.0033570852,0.00063916907,0.0002285291,0.0000516473,4.372637e-7,0.0002165078,0.000005213638,0.00000632517],"study_design_codex":"observational","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9984629,0.00032053806,0.0008803365,0.00009740021,0.00014594027,0.000092840164],"domain_scores_gemma":[0.99887186,0.00018461909,0.00065968937,0.00017302176,0.00007892816,0.00003187301],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019241102,0.00005128163,0.00017095033,0.00006214936,0.000014903065,0.000013020671,0.00022779561,0.000054006236,0.000002551336],"category_scores_gemma":[0.0011609491,0.000036491165,0.00006762356,0.00022112396,0.00009672452,0.000019504023,0.00003399042,0.00015125755,1.454357e-7],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00062250724,0.00168025,0.4853095,0.003978725,0.0010748622,0.000007477101,0.0014352052,0.12895964,0.03827797,0.0018292334,0.013149754,0.32367486],"study_design_scores_gemma":[0.0016174179,0.003338209,0.27011162,0.0024069897,0.00037481874,0.00000815547,0.0005789501,0.69490814,0.0037252842,0.017796999,0.0048907944,0.0002426278],"about_ca_topic_score_codex":0.00006474543,"about_ca_topic_score_gemma":0.000010849631,"teacher_disagreement_score":0.5659485,"about_ca_system_score_codex":0.000012103532,"about_ca_system_score_gemma":0.0005021985,"threshold_uncertainty_score":0.14880665},"labels":[],"label_agreement":null},{"id":"W4405407735","doi":"10.1172/jci187783","title":"The paradox of eGFR trends and kidney failure incidence in patients without monogenic kidney disorders. Reply.","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Renal Diseases and Glomerulopathies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Incidence (geometry); Kidney; Medicine; Internal medicine; Bioinformatics; Intensive care medicine; Biology; Mathematics","score_opus":0.02329240711761159,"score_gpt":0.34449302441156043,"score_spread":0.32120061729394883,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405407735","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97314286,0.0019529704,0.000026433976,0.024314865,0.000359963,0.00010129854,0.000008656271,0.000007402293,0.00008551992],"genre_scores_gemma":[0.9954961,0.002228463,0.00046718723,0.0014521359,0.00020035642,0.0000024937083,0.00000968652,0.000011066752,0.00013252786],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99777484,0.00017871888,0.0013655733,0.00015470834,0.00040608333,0.0001200872],"domain_scores_gemma":[0.998253,0.00040323724,0.0005121242,0.00016135808,0.00016421457,0.000506055],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012855304,0.00010512327,0.00038831434,0.00016224437,0.000039674505,0.00004005122,0.000087270986,0.000090624286,0.000013694413],"category_scores_gemma":[0.006412656,0.00006188531,0.00020981509,0.00035857127,0.00032936584,0.00023875541,0.00003070708,0.00043752577,0.0000020328366],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038981938,0.00009024719,0.94970775,0.00016988347,0.000077196455,0.000010596622,0.00017978696,0.0000049657356,0.00009131284,0.00020346853,0.010346752,0.038728233],"study_design_scores_gemma":[0.0014918381,0.0008963469,0.9776951,0.0016356504,0.00018510214,0.000014204827,0.000053330088,0.0011239934,0.000086939544,0.0052195364,0.011525189,0.00007277572],"about_ca_topic_score_codex":0.000022856908,"about_ca_topic_score_gemma":0.000013185389,"teacher_disagreement_score":0.03865546,"about_ca_system_score_codex":0.000024308569,"about_ca_system_score_gemma":0.00043640667,"threshold_uncertainty_score":0.76770115},"labels":[],"label_agreement":null},{"id":"W4405407747","doi":"10.1172/jci184790","title":"Immune-molecular interactions in high-grade serous ovarian cancer distinguish long-term survivors","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Ovarian cancer diagnosis and treatment","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Beatrice Hunter Cancer Research Institute; Dalhousie University","funders":"Ovarian Cancer Canada","keywords":"Serous ovarian cancer; Ovarian cancer; Term (time); Immune system; Serous fluid; Medicine; Cancer; Biology; Oncology; Bioinformatics; Cancer research; Internal medicine; Immunology; Physics","score_opus":0.07930643492989356,"score_gpt":0.4239870536736384,"score_spread":0.3446806187437449,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405407747","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9749943,0.0022884351,0.00029412622,0.018584523,0.0034523655,0.00018654008,0.000007850498,0.000022911629,0.00016894733],"genre_scores_gemma":[0.99615496,0.00076862355,0.0010291236,0.00065780245,0.0011526525,0.000017070597,0.00001935135,0.000025260502,0.00017514532],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997667,0.00018166118,0.0014654205,0.00021681633,0.00031026476,0.00015885138],"domain_scores_gemma":[0.99848306,0.0004886967,0.000426041,0.00017202378,0.00018353152,0.00024663494],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00090887013,0.00014022947,0.0005211802,0.00019820781,0.000030505516,0.00007637593,0.00008253714,0.00009511927,0.00014246805],"category_scores_gemma":[0.00072188576,0.000109303975,0.00029559538,0.000352653,0.00009855539,0.00020028697,0.00002168509,0.00070212263,0.000014747058],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012406953,0.0004599724,0.9664414,0.00016269092,0.0004819508,0.0016468716,0.0002328092,0.00012678592,0.00084151176,0.0011896152,0.00074590056,0.0275464],"study_design_scores_gemma":[0.0017941219,0.00033857467,0.98994833,0.0025780401,0.00042904407,0.00013961298,0.000020535028,0.00030613944,0.0016545149,0.0015395994,0.0011484303,0.00010305607],"about_ca_topic_score_codex":0.00082563027,"about_ca_topic_score_gemma":0.0006800233,"teacher_disagreement_score":0.027443344,"about_ca_system_score_codex":0.00024568604,"about_ca_system_score_gemma":0.00053806027,"threshold_uncertainty_score":0.4457287},"labels":[],"label_agreement":null},{"id":"W4405463732","doi":"10.1172/jci183353","title":"Regulation of sarcomere formation and function in the healthy heart requires a titin intronic enhancer","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian VIGOUR Centre; University of Alberta","funders":"Lawrence Berkeley National Laboratory; National Institute of Child Health and Human Development; National Human Genome Research Institute; NHLBI Division of Intramural Research; British Heart Foundation; National Heart, Lung, and Blood Institute; U.S. Department of Energy; Eunice Kennedy Shriver National Institute of Child Health and Human Development; Howard Hughes Medical Institute; National Institutes of Health; National Science Foundation","keywords":"Enhancer; Biology; Titin; Cell biology; Induced pluripotent stem cell; Sarcomere; Molecular biology; Haploinsufficiency; Gene expression; Genetics; Gene; Embryonic stem cell; Myocyte; Phenotype","score_opus":0.043011381121353366,"score_gpt":0.38690827710074777,"score_spread":0.3438968959793944,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405463732","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9916081,0.0010890097,0.004011203,0.003086855,0.0001011401,0.00006778562,0.0000011132175,0.0000038934286,0.000030920233],"genre_scores_gemma":[0.9966972,0.0006603129,0.0018813428,0.0004042255,0.00032325878,0.000001115666,0.000014808345,0.0000037277314,0.000014035477],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988125,0.0002124566,0.0007006432,0.0000882946,0.0001297771,0.00005631885],"domain_scores_gemma":[0.9993965,0.0000878401,0.00030418744,0.00008207055,0.00010266921,0.000026727106],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017168958,0.000050852577,0.00013847201,0.00007267729,0.000021314376,0.000018008213,0.00004161124,0.000099258184,9.030107e-7],"category_scores_gemma":[0.00033686173,0.000032778706,0.00007970419,0.00013362849,0.000104431834,0.000027184644,0.000011008193,0.0001531403,2.9917288e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046249246,0.00006342604,0.0061397185,0.00014076561,0.000052933767,0.0000012057379,0.00016607068,0.00005833877,0.90280265,0.0009889001,0.0042241435,0.084899336],"study_design_scores_gemma":[0.0014148076,0.006111761,0.24435289,0.0010693608,0.0002514332,0.00018461389,0.00053055305,0.0073126317,0.6418302,0.044520307,0.052116733,0.00030466716],"about_ca_topic_score_codex":0.000003785326,"about_ca_topic_score_gemma":0.000024410525,"teacher_disagreement_score":0.26097244,"about_ca_system_score_codex":0.000010721531,"about_ca_system_score_gemma":0.00007161546,"threshold_uncertainty_score":0.13366768},"labels":[],"label_agreement":null},{"id":"W4405614611","doi":"10.1172/jci164997","title":"Metalloproteinase inhibitors regulate biliary progenitor cells through sDLK1 in organoid models of liver injury","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Liver physiology and pathology","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Tech University; University of Toronto; Princess Margaret Cancer Centre; University Health Network","funders":"Canadian Institutes of Health Research; Ontario Institute for Regenerative Medicine; Peking University Health Science Center; Peking University","keywords":"Cholangiocyte; Progenitor cell; Organoid; Notch signaling pathway; Cell biology; TIMP1; Stem cell; Cancer research; Liver injury; Mesenchymal stem cell; Cellular differentiation; Biology; Stromal cell; Immunology; Pathology; Medicine; Endocrinology; Signal transduction; Biochemistry","score_opus":0.08563399891996966,"score_gpt":0.36996799406219,"score_spread":0.28433399514222035,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405614611","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962338,0.0011049726,0.00018026837,0.0010908368,0.0010191913,0.00026543043,0.0000041622247,0.000015156768,0.000086175874],"genre_scores_gemma":[0.99084586,0.00039363594,0.0072725234,0.00047240674,0.00086072134,0.0000035206458,0.000005720341,0.000017281985,0.00012830306],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973204,0.00043786038,0.0016557131,0.00020232292,0.00024721565,0.00013648169],"domain_scores_gemma":[0.9985937,0.00032577073,0.0005238297,0.00017268959,0.00024636366,0.00013764868],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017785787,0.00012666936,0.0006420435,0.0001758743,0.000017815215,0.0000070329515,0.00009644214,0.00034210627,0.000045209454],"category_scores_gemma":[0.0005076238,0.00009188916,0.00028504853,0.00033356497,0.00042950932,0.00045990868,0.00003947416,0.0007938363,0.000019246756],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014444127,0.0006720879,0.0112400325,0.00089955266,0.0004080575,0.0009987823,0.0021995427,0.0003791691,0.9689135,0.0026474288,0.0032920707,0.006905358],"study_design_scores_gemma":[0.0018367468,0.0032185686,0.03345237,0.0016691894,0.0005672756,0.00024309506,0.00008581288,0.004569081,0.84731853,0.10626032,0.0005695347,0.00020948904],"about_ca_topic_score_codex":0.00001937181,"about_ca_topic_score_gemma":0.0000024750893,"teacher_disagreement_score":0.12159499,"about_ca_system_score_codex":0.00003205176,"about_ca_system_score_gemma":0.00054308324,"threshold_uncertainty_score":0.37471312},"labels":[],"label_agreement":null},{"id":"W4405967896","doi":"10.1172/jci184656","title":"APP lysine 612 lactylation ameliorates amyloid pathology and memory decline in Alzheimer’s disease","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Alzheimer's disease research and treatments","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Centre Scientifique et Technique du Bâtiment; Natural Science Foundation of Chongqing; Chongqing Medical University; National Natural Science Foundation of China","keywords":"Disease; Amyloid (mycology); Alzheimer's disease; Pathology; Medicine; Lysine; Biology; Biochemistry; Amino acid","score_opus":0.08893875094829513,"score_gpt":0.42558902195050197,"score_spread":0.33665027100220685,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405967896","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97859895,0.0091263745,0.00007192886,0.011505238,0.00016443638,0.00026245447,0.000005111882,0.000012351676,0.0002531473],"genre_scores_gemma":[0.9959822,0.0011263095,0.0010726285,0.0014961569,0.00024411954,0.000006700964,0.000032821237,0.000009544639,0.000029502236],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99774396,0.00033636813,0.0011765048,0.0001942227,0.00038115314,0.00016776995],"domain_scores_gemma":[0.99780154,0.0005606787,0.0004428546,0.00016121166,0.00046091006,0.00057280896],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016289335,0.00012420073,0.00049710233,0.00032282656,0.000043644635,0.000024734803,0.00006636007,0.00012223392,0.000030179533],"category_scores_gemma":[0.0029178564,0.00009523125,0.00014073962,0.00034141794,0.00029865903,0.0002340709,0.000049931296,0.00039203643,0.000010389738],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019762684,0.00057886343,0.9693831,0.00004979037,0.0011147549,0.0004995961,0.000034158034,0.000033290646,0.00023730521,0.0001597693,0.0007139621,0.02521912],"study_design_scores_gemma":[0.0044952855,0.00043013538,0.9811971,0.00030655504,0.0010352683,0.000027173744,0.00003746974,0.0011934077,0.00044742395,0.010614513,0.00014719581,0.00006843151],"about_ca_topic_score_codex":0.000020398054,"about_ca_topic_score_gemma":0.000017153307,"teacher_disagreement_score":0.025150688,"about_ca_system_score_codex":0.00004415494,"about_ca_system_score_gemma":0.00095966767,"threshold_uncertainty_score":0.38834175},"labels":[],"label_agreement":null},{"id":"W4405967898","doi":"10.1172/jci181630","title":"Cardiac fibroblast BAG3 regulates TGFBR2 signaling and fibrosis in dilated cardiomyopathy","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cardiac Fibrosis and Remodeling","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute of General Medical Sciences; National Heart, Lung, and Blood Institute; National Institute of Biomedical Imaging and Bioengineering; American Heart Association","keywords":"Dilated cardiomyopathy; Fibrosis; Cardiac fibrosis; Cardiomyopathy; Medicine; BAG3; Fibroblast; Myocardial fibrosis; Cancer research; Heart failure; Cardiology; Internal medicine; Biology; Autophagy; Cell culture; Genetics","score_opus":0.03633411086615584,"score_gpt":0.3404545668808731,"score_spread":0.30412045601471727,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405967898","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952597,0.001447779,0.00017760244,0.002013018,0.00057147717,0.00017656042,0.000002990533,0.0000140889815,0.00033676383],"genre_scores_gemma":[0.99453914,0.00046081186,0.0040123314,0.0003468558,0.00050113146,0.0000015408501,0.0000069791017,0.000013888521,0.00011730891],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99734515,0.00025633737,0.0017149291,0.00021421163,0.00030030642,0.00016908762],"domain_scores_gemma":[0.99818027,0.000624289,0.00047594344,0.00016642184,0.00033202654,0.00022105763],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024608904,0.00014431536,0.0009776328,0.00029883796,0.00005238095,0.00004794836,0.00005910642,0.000259985,0.0000052454375],"category_scores_gemma":[0.0013961318,0.00011407915,0.0004921273,0.00042453036,0.00017024585,0.00019142189,0.000046221467,0.0005666122,0.000001499222],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00064716005,0.00007479808,0.7755986,0.00031445426,0.00034377252,0.000017168564,0.00025515584,0.002790541,0.20699641,0.00021239319,0.0015090852,0.011240451],"study_design_scores_gemma":[0.0024998926,0.0004369146,0.95901877,0.0044751465,0.00043584188,0.000031614076,0.00018533377,0.005681004,0.023360986,0.0025247764,0.0011866197,0.00016311763],"about_ca_topic_score_codex":0.000022153603,"about_ca_topic_score_gemma":0.0000014548841,"teacher_disagreement_score":0.18363543,"about_ca_system_score_codex":0.000057116984,"about_ca_system_score_gemma":0.0002887565,"threshold_uncertainty_score":0.4652013},"labels":[],"label_agreement":null},{"id":"W4406387153","doi":"10.1172/jci187567","title":"A new twist on superantigen-activated autoimmune disease","year":2025,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Diabetes and associated disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta Hospital; University of Alberta","funders":"Canadian Institutes of Health Research; University of Alberta","keywords":"Superantigen; Autoimmune disease; Immunology; Medicine; Twist; Computational biology; Biology; Immune system; T cell; Antibody","score_opus":0.03143174601528613,"score_gpt":0.32818715905377294,"score_spread":0.2967554130384868,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406387153","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20811479,0.0012838204,0.00025575655,0.78562367,0.0032630695,0.00028267252,0.00006972625,0.000018420125,0.0010880594],"genre_scores_gemma":[0.03448137,0.0011622078,0.0008005524,0.9364009,0.010786648,0.0000047868452,0.001412076,0.00006963554,0.0148818055],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.997478,0.00032902788,0.0012997648,0.0002976053,0.0003650539,0.00023052373],"domain_scores_gemma":[0.99788123,0.00016709193,0.0011316314,0.00031517725,0.00027828934,0.00022656092],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00059649884,0.0002516244,0.0005645791,0.00010962552,0.000052546762,0.0000648895,0.0003388264,0.000901222,0.00004358056],"category_scores_gemma":[0.0024419774,0.00021659945,0.00063786993,0.00013706766,0.00010810626,0.000008532683,0.000050899638,0.001447423,0.000011644694],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015334156,0.00005675699,0.0020377517,0.000042705207,0.00033619077,0.00003506431,0.0000057044253,0.000043179607,0.003565458,0.000009943775,0.98850334,0.0052105957],"study_design_scores_gemma":[0.0013452824,0.0005647496,0.0095571475,0.00048000738,0.00020844692,0.0000013330263,0.000005076823,0.000016250006,0.003760045,0.0011968655,0.98260766,0.00025713223],"about_ca_topic_score_codex":0.000014409321,"about_ca_topic_score_gemma":0.0000015330509,"teacher_disagreement_score":0.17363343,"about_ca_system_score_codex":0.00002379906,"about_ca_system_score_gemma":0.0014617183,"threshold_uncertainty_score":0.8832669},"labels":[],"label_agreement":null},{"id":"W4406664644","doi":"10.1172/jci188016","title":"Mycobacterium tuberculosis resisters despite HIV exhibit activated T cells and macrophages in their pulmonary alveoli","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Faculty of Medicine and Health, University of Sydney; National Institute of Allergy and Infectious Diseases; Medical Research Council; National Institutes of Health; St. Giles Foundation; Universiteit Stellenbosch; Agence Nationale de Recherches sur le Sida et les Hépatites Virales; CHIST-ERA; National Center for Advancing Translational Sciences; Agence Nationale de la Recherche; South African Medical Research Council; Canadian Institutes of Health Research; Alliance de recherche numérique du Canada; McGill University Health Centre; McGill University; Institut des maladies génétiques Imagine","keywords":"Granulysin; CTL*; Cytotoxic T cell; Perforin; Mycobacterium tuberculosis; Immunology; Biology; Granzyme; Bronchoalveolar lavage; T cell; Ex vivo; Virology; Microbiology; CD8; Medicine; Immune system; Tuberculosis; In vitro; Lung; Pathology","score_opus":0.02679595442364356,"score_gpt":0.2988540074960211,"score_spread":0.2720580530723775,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406664644","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99202025,0.00091924745,0.00008284761,0.0025011285,0.0035752081,0.00010390351,0.0000022170568,0.000013646955,0.0007815706],"genre_scores_gemma":[0.99339354,0.0008345122,0.000120114455,0.0012622661,0.00006874054,0.0000026649573,0.00002071737,0.000008621497,0.0042888047],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99776024,0.00062816247,0.0012438527,0.0001776812,0.00003764173,0.00015245014],"domain_scores_gemma":[0.99844354,0.0006385116,0.0005878303,0.00013162577,0.00016080328,0.000037658217],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010277443,0.00013609695,0.00039876075,0.00027789985,0.00007437661,0.000029793378,0.00010447127,0.0003087446,0.00013156405],"category_scores_gemma":[0.0004926771,0.00010882269,0.0001579473,0.00020663156,0.00023253985,0.00034972222,0.000045523037,0.0007269947,0.00003386684],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007960647,0.000119932694,0.034004115,0.000033216103,0.00013692086,0.000006635427,0.00013258039,0.0000126199875,0.94887966,0.000039820865,0.00873644,0.007101982],"study_design_scores_gemma":[0.0015173052,0.00022905583,0.30338645,0.0004114969,0.00007091832,0.00005337206,0.00033591114,0.000056146153,0.66349155,0.0005109527,0.029812934,0.0001239204],"about_ca_topic_score_codex":0.000018300163,"about_ca_topic_score_gemma":0.000004184797,"teacher_disagreement_score":0.28538814,"about_ca_system_score_codex":0.00004976565,"about_ca_system_score_gemma":0.0000946883,"threshold_uncertainty_score":0.44376606},"labels":[],"label_agreement":null},{"id":"W4406756853","doi":"10.1172/jci182584","title":"Neonatal but not juvenile gene therapy reduces seizures and prolongs lifespan in SCN1B–Dravet syndrome mice","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Genetics and Neurodevelopmental Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Neurological Disorders and Stroke; Canadian Institutes of Health Research; National Institutes of Health; College of Pharmacy, University of Michigan; Medical School, University of Michigan; Ministerstvo Životního Prostředí; University of Michigan","keywords":"Dravet syndrome; Juvenile; Genetic enhancement; Medicine; Epilepsy; Bioinformatics; Gene; Endocrinology; Neuroscience; Biology; Internal medicine; Genetics; Psychiatry","score_opus":0.032493294989793337,"score_gpt":0.3260321485196078,"score_spread":0.29353885352981446,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406756853","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962052,0.0013022731,0.00004261291,0.001993926,0.00028690035,0.00012055521,0.0000041507583,0.0000022092229,0.000042186894],"genre_scores_gemma":[0.9943352,0.0019135495,0.001624076,0.0018705507,0.00005270403,0.0000036479682,0.000013876134,0.000008643083,0.00017779299],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986541,0.00013809456,0.00075557915,0.00020133851,0.00013105512,0.000119817756],"domain_scores_gemma":[0.9993568,0.000054572716,0.00030837138,0.00009148565,0.00009233359,0.00009645353],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006592189,0.0001064291,0.00023339778,0.000083139435,0.000038454815,0.000029031675,0.00014211575,0.00015694354,0.0000029325051],"category_scores_gemma":[0.00042289015,0.00009321458,0.00007752829,0.00010142903,0.00016068897,0.0000095376,0.000058172733,0.00020204292,8.9069016e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005180125,0.00012015433,0.058179118,0.000025355437,0.00009657342,0.000040024177,0.00012561952,0.000092731214,0.9203553,0.000027460364,0.0011690126,0.019250616],"study_design_scores_gemma":[0.0015632103,0.0006543658,0.6518908,0.00006080636,0.000014061745,0.00010607095,0.00006830971,0.00006225555,0.34153047,0.0008034392,0.003125821,0.000120382494],"about_ca_topic_score_codex":0.000010069522,"about_ca_topic_score_gemma":0.00001942596,"teacher_disagreement_score":0.5937117,"about_ca_system_score_codex":0.0000059948907,"about_ca_system_score_gemma":0.00026409514,"threshold_uncertainty_score":0.380118},"labels":[],"label_agreement":null},{"id":"W4406969198","doi":"10.1172/jci187024","title":"Elevated protein lactylation promotes immunosuppressive microenvironment and therapeutic resistance in pancreatic ductal adenocarcinoma","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Peptidase Inhibition and Analysis","field":"Medicine","cited_by":85,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pancreas Centre (Canada)","funders":"National Natural Science Foundation of China","keywords":"Pancreatic ductal adenocarcinoma; Cancer research; Tumor microenvironment; Adenocarcinoma; Medicine; Biology; Pancreatic cancer; Internal medicine; Immunology; Cancer; Tumor cells","score_opus":0.03386812966126453,"score_gpt":0.33072171010706813,"score_spread":0.2968535804458036,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406969198","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9904228,0.0012282714,0.00013923798,0.007810015,0.000023157298,0.00025641124,0.0000012060262,0.0000059704066,0.000112938265],"genre_scores_gemma":[0.9968081,0.00008072321,0.0018294962,0.0006413329,0.000070841124,0.000006285193,0.000008095686,0.0000058474106,0.00054923753],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981912,0.00025435205,0.0011198624,0.00014066802,0.00019877417,0.000095141586],"domain_scores_gemma":[0.99893934,0.00017349752,0.00057219976,0.00011210126,0.000111711925,0.000091177084],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008059096,0.00009262625,0.00038991746,0.00018869036,0.000035076366,0.000020580239,0.000041869902,0.00010492745,0.000026932332],"category_scores_gemma":[0.00079810264,0.00007345557,0.000108247346,0.0002325694,0.00017429433,0.00011196316,0.00001386185,0.0003522426,0.0000024130738],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00063862925,0.0002382936,0.69792414,0.00015611752,0.00019041412,0.00006263241,0.00021945391,0.000006115473,0.2993336,0.00042672135,0.00014043032,0.0006634713],"study_design_scores_gemma":[0.0022794763,0.00022172487,0.9629156,0.0022948717,0.00016243538,0.000018406421,0.000090663176,0.00046961935,0.02370754,0.0076991087,0.00007674217,0.000063831925],"about_ca_topic_score_codex":0.0000049743676,"about_ca_topic_score_gemma":0.000009121848,"teacher_disagreement_score":0.27562606,"about_ca_system_score_codex":0.000061515624,"about_ca_system_score_gemma":0.00015083097,"threshold_uncertainty_score":0.2995431},"labels":[],"label_agreement":null},{"id":"W4407070174","doi":"10.1172/jci168730","title":"Translational regulation of SND1 governs endothelial homeostasis during stress","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cancer, Hypoxia, and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Heart, Lung, and Blood Institute; Chinese University of Hong Kong; Chicago Community Trust; University of California, San Francisco; American Heart Association","keywords":"Homeostasis; Cell biology; Posttranslational modification; Medicine; Chemistry; Biology; Biochemistry; Enzyme","score_opus":0.030197818831023127,"score_gpt":0.33633079806393373,"score_spread":0.3061329792329106,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407070174","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947146,0.0010883189,0.0017949883,0.0005901253,0.0014048949,0.000074260715,0.00004735484,0.0000023563061,0.0002831128],"genre_scores_gemma":[0.9949123,0.000922597,0.0015146647,0.0001339432,0.0021267626,0.000001349616,0.000030667034,0.000006994367,0.00035069653],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99846303,0.00012352536,0.0009768064,0.00012521741,0.00022653368,0.000084908075],"domain_scores_gemma":[0.99877506,0.000070593014,0.00066269486,0.00012854584,0.00028668213,0.00007639753],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005895004,0.00007931297,0.00025301633,0.00007041947,0.00004026527,0.000010779663,0.000112283014,0.00015885542,0.00001852785],"category_scores_gemma":[0.0006399513,0.00007322974,0.00023317347,0.00010579679,0.00012401596,0.00001558072,0.00001824174,0.00014227103,5.763152e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008980199,0.00015259648,0.073376805,0.00011451544,0.00026090536,5.6839224e-7,0.000106013584,0.0015536445,0.8952509,0.0013688443,0.0023370946,0.024580088],"study_design_scores_gemma":[0.002094274,0.00014386592,0.5839879,0.00012234284,0.00010679771,0.000005963669,0.000034967965,0.000096070224,0.39314058,0.0022685553,0.017912233,0.00008645602],"about_ca_topic_score_codex":0.000007916792,"about_ca_topic_score_gemma":0.000020484835,"teacher_disagreement_score":0.5106111,"about_ca_system_score_codex":0.000008417816,"about_ca_system_score_gemma":0.00030849242,"threshold_uncertainty_score":0.29862222},"labels":[],"label_agreement":null},{"id":"W4407070221","doi":"10.1172/jci174910","title":"Lactobacillus rhamnosus GG induces STING-dependent IL-10 in intestinal monocytes and alleviates inflammatory colitis in mice","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Cancer Institute; Agricultural Science and Technology Innovation Program; National Key Research and Development Program of China","keywords":"Lactobacillus rhamnosus; Colitis; Sting; Immunology; Microbiology; Medicine; Inflammatory Bowel Diseases; Lactobacillus; Monocyte; Inflammatory bowel disease; Biology; Internal medicine; Bacteria","score_opus":0.047076617500409125,"score_gpt":0.3401831277703086,"score_spread":0.2931065102698995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407070221","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99493587,0.002570684,0.000015543585,0.0012142003,0.0007033556,0.00012693141,0.0000031170393,0.00001060698,0.00041970398],"genre_scores_gemma":[0.9979352,0.0004549782,0.00017155553,0.00038199322,0.000044591518,0.0000044707945,0.000005282856,0.000006917674,0.0009950526],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9967879,0.0009795252,0.0017760138,0.00018388378,0.00005796535,0.00021472012],"domain_scores_gemma":[0.99678713,0.0021999734,0.0006661602,0.00009843986,0.00020529931,0.000042975862],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024511027,0.00015007498,0.0005251837,0.000399626,0.000047233734,0.000032500488,0.00019676203,0.00032611948,0.000071872164],"category_scores_gemma":[0.00708158,0.0001297879,0.00008917958,0.00017365302,0.0003982635,0.00023693037,0.0000948354,0.0009547152,0.000023900051],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006678695,0.00047883517,0.71164197,0.00016704269,0.00030946638,0.00014506363,0.0014724828,0.000075885466,0.23770095,0.0019448228,0.0025614311,0.036823362],"study_design_scores_gemma":[0.0041084904,0.0007701243,0.9026284,0.001206701,0.0000404012,0.00014014717,0.0008824853,0.000055999648,0.08468619,0.0026126343,0.0026943933,0.00017401754],"about_ca_topic_score_codex":0.000108229986,"about_ca_topic_score_gemma":0.0002479732,"teacher_disagreement_score":0.19098647,"about_ca_system_score_codex":0.00007619716,"about_ca_system_score_gemma":0.00040302845,"threshold_uncertainty_score":0.8477824},"labels":[],"label_agreement":null},{"id":"W4407133319","doi":"10.1172/jci182931","title":"Sleep-wake variation in body temperature regulates tau secretion and correlates with CSF and plasma tau","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Sleep and Wakefulness Research","field":"Neuroscience","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier de l'Université Laval","funders":"National Heart, Lung, and Blood Institute; National Institute on Aging; Fonds de Recherche du Québec - Santé; Alzheimer Society; Canadian Institutes of Health Research; National Institutes of Health; BrightFocus Foundation","keywords":"Secretion; Endocrinology; Internal medicine; Wake; Sleep (system call); Medicine; Biology; Chemistry; Psychology; Physics","score_opus":0.040692058797043504,"score_gpt":0.3419689701334892,"score_spread":0.3012769113364457,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407133319","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954283,0.00008278007,0.00016800738,0.0036372768,0.0003105313,0.00016617197,0.0000019389142,0.000010467294,0.0001944989],"genre_scores_gemma":[0.99869376,0.0001978256,0.0003508657,0.0004992594,0.00012325193,0.0000040754926,0.0000018715293,0.000007756928,0.000121302255],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979607,0.0004810961,0.00081108947,0.00025333383,0.00034532795,0.00014843776],"domain_scores_gemma":[0.9976414,0.0015035945,0.0004156823,0.000106257845,0.00018575731,0.00014730825],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015744057,0.00011265776,0.00030006093,0.0002563868,0.00010942369,0.00014866331,0.000103200146,0.00022095678,0.000010777902],"category_scores_gemma":[0.0053122453,0.00008219528,0.00003760359,0.00048638778,0.0003495574,0.0005775843,0.0000411268,0.0007156891,0.0000013596614],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017128326,0.00030082357,0.6599784,0.00016719651,0.00007470083,0.000116095776,0.0010989637,0.0012515627,0.28201294,0.018337695,0.00062020635,0.034328602],"study_design_scores_gemma":[0.0030012212,0.0006035324,0.89814264,0.00046994747,0.000053230546,0.00008654876,0.00010125119,0.03299703,0.04425062,0.019961031,0.00018932199,0.00014364456],"about_ca_topic_score_codex":0.000008940255,"about_ca_topic_score_gemma":0.000016845059,"teacher_disagreement_score":0.23816423,"about_ca_system_score_codex":0.000028248287,"about_ca_system_score_gemma":0.00014489709,"threshold_uncertainty_score":0.63596374},"labels":[],"label_agreement":null},{"id":"W4407353783","doi":"10.1172/jci187376","title":"Safety and efficacy of pharmacological inhibition of ketohexokinase in hereditary fructose intolerance","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Diet, Metabolism, and Disease","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre for Movement Disorders","funders":"","keywords":"Genetics; Fructose; Medicine; Biology; Bioinformatics; Biochemistry","score_opus":0.05181557271356562,"score_gpt":0.3981591772422845,"score_spread":0.3463436045287189,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407353783","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956872,0.0013874006,0.00011750704,0.001840378,0.00043267818,0.0001741609,0.000007658298,0.00000460229,0.00034841942],"genre_scores_gemma":[0.9964986,0.00088477763,0.001179701,0.0011038745,0.00029430652,9.0307975e-7,0.000008063403,0.000004236456,0.00002554925],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997404,0.00025616016,0.001876768,0.00012413278,0.00025135698,0.00008759533],"domain_scores_gemma":[0.99797237,0.0006779176,0.0007689898,0.00009110467,0.00027905838,0.000210586],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015568909,0.00008818306,0.00066545414,0.00018569214,0.000014409276,0.000003887168,0.000050917526,0.00013628227,0.000031902895],"category_scores_gemma":[0.0039628283,0.000068659065,0.00016790481,0.00028730484,0.00037924302,0.00016243242,0.000027043516,0.00038036195,5.404656e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.024785068,0.004457818,0.79320997,0.0010844168,0.000443197,0.00038898934,0.00062435016,0.00034308885,0.0561052,0.0033783019,0.005554579,0.109625004],"study_design_scores_gemma":[0.010659245,0.0005398912,0.9701149,0.0009600588,0.0004031181,0.000012242678,0.00009692262,0.00042911666,0.011485671,0.0048203543,0.00042089671,0.000057578225],"about_ca_topic_score_codex":0.000008570423,"about_ca_topic_score_gemma":0.000002566369,"teacher_disagreement_score":0.17690492,"about_ca_system_score_codex":0.000018233715,"about_ca_system_score_gemma":0.0003432325,"threshold_uncertainty_score":0.4744162},"labels":[],"label_agreement":null},{"id":"W4408091719","doi":"10.1172/jci177241","title":"CRISPR-mediated detection of Pneumocystis transcripts in bronchoalveolar, oropharyngeal, and serum specimens for Pneumocystis pneumonia diagnosis","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pneumocystis jirovecii pneumonia detection and treatment","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"National Institute of Allergy and Infectious Diseases; National Heart, Lung, and Blood Institute; National Institute for Health and Care Research","keywords":"Pneumonia; Pneumocystis pneumonia; Pneumocystis carinii; Bronchoalveolar lavage; Microbiology; Medicine; Virology; Immunology; Pneumocystis jirovecii; Biology; Lung; Internal medicine","score_opus":0.043100553466879896,"score_gpt":0.36576558511182883,"score_spread":0.3226650316449489,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408091719","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9907403,0.0013960577,0.0010488613,0.004427081,0.0012239354,0.0010050897,0.000046367055,0.000030652613,0.000081649385],"genre_scores_gemma":[0.99581707,0.0020448142,0.0010375964,0.0005690819,0.00023091282,0.00008204839,0.000011340947,0.000030283718,0.0001768269],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99577796,0.00029579527,0.0027977605,0.00039908907,0.0004289752,0.00030041044],"domain_scores_gemma":[0.99604017,0.0015934347,0.0011743949,0.00025592113,0.00054755586,0.00038851277],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013817588,0.00029630944,0.0013389784,0.0007188154,0.000088464265,0.00003458419,0.00012689868,0.0003656969,0.000016672475],"category_scores_gemma":[0.002900094,0.00026065455,0.0004478758,0.00056875503,0.00028272887,0.00032313683,0.000028546803,0.00065889175,0.000003471505],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022801259,0.0014072362,0.45406744,0.00094796973,0.00056505477,0.00013842381,0.0002842055,0.000052073505,0.48845267,0.0001572075,0.0002929568,0.051354654],"study_design_scores_gemma":[0.00980402,0.0032829652,0.91851884,0.0011623988,0.00063550164,0.00016021336,0.0001029664,0.0012908174,0.05974594,0.0012036407,0.003908357,0.0001843343],"about_ca_topic_score_codex":0.00006270394,"about_ca_topic_score_gemma":0.00022931835,"teacher_disagreement_score":0.4644514,"about_ca_system_score_codex":0.00019565076,"about_ca_system_score_gemma":0.00038317297,"threshold_uncertainty_score":0.99998456},"labels":[],"label_agreement":null},{"id":"W4408186354","doi":"10.1172/jci187711","title":"Macrophage-mediated IL-6 signaling drives ryanodine receptor–2 calcium leak in postoperative atrial fibrillation","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Atrial Fibrillation Management and Outcomes","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Heart Institute","funders":"National Heart, Lung, and Blood Institute; National Institutes of Health; European Commission","keywords":"Ryanodine receptor; Atrial fibrillation; Calcium; Leak; Receptor; Signal transduction; Medicine; Cardiology; Macrophage; Internal medicine; Endocrinology; Chemistry; Cell biology; Biology; Biochemistry; Engineering","score_opus":0.11789891127048086,"score_gpt":0.4240639204558283,"score_spread":0.30616500918534745,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408186354","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9735243,0.00049906,0.0011304956,0.022153089,0.0017644466,0.0004054363,0.000003879632,0.000025338522,0.00049399864],"genre_scores_gemma":[0.99089634,0.00023430315,0.0035398817,0.0008827127,0.0031882953,3.1176165e-7,0.000053391122,0.000013638121,0.0011911168],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.996529,0.0004233153,0.0022743316,0.00020221989,0.00040562992,0.00016550542],"domain_scores_gemma":[0.99686,0.0014254736,0.0009433078,0.00013091757,0.00046828642,0.00017199891],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022219722,0.00015759551,0.0007432704,0.00045365831,0.000065892804,0.000045267923,0.000085960375,0.00024143772,0.00011740166],"category_scores_gemma":[0.007885462,0.00012813705,0.00046022297,0.00067631435,0.0001460451,0.00036031913,0.000039424198,0.0004648269,0.00003091061],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019501704,0.000012716645,0.956713,0.000059840837,0.00024565967,0.000022230102,0.0002492815,0.0038433634,0.020296773,0.001355385,0.0021208718,0.013130693],"study_design_scores_gemma":[0.01579527,0.0014011498,0.90176606,0.0011498635,0.0005324166,0.000012650113,0.00036052417,0.0100466935,0.013068431,0.0043619764,0.051170338,0.000334625],"about_ca_topic_score_codex":0.000011092724,"about_ca_topic_score_gemma":0.000008887043,"teacher_disagreement_score":0.05494695,"about_ca_system_score_codex":0.00011119656,"about_ca_system_score_gemma":0.00040696465,"threshold_uncertainty_score":0.9440204},"labels":[],"label_agreement":null},{"id":"W4408491184","doi":"10.1172/jci185217","title":"Deep immunophenotyping reveals circulating activated lymphocytes in individuals at risk for rheumatoid arthritis","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Systemic Lupus Erythematosus Research","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Arthritis Society","funders":"National Center for Advancing Translational Sciences; National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institutes of Health","keywords":"Immunophenotyping; Rheumatoid arthritis; Immunology; Medicine; Antigen","score_opus":0.062463567977857924,"score_gpt":0.38908535519224,"score_spread":0.3266217872143821,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408491184","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931948,0.003126598,0.001307441,0.0009806207,0.00049562514,0.00068019854,0.000003468211,0.000018149929,0.00019310077],"genre_scores_gemma":[0.98963,0.0020382707,0.0076040435,0.0003341636,0.00021855648,0.000024227862,0.000012354855,0.000023058192,0.00011535903],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9951996,0.00064806914,0.0031322332,0.00023398804,0.0004993536,0.00028673254],"domain_scores_gemma":[0.99233776,0.00476393,0.0018052736,0.00025528017,0.0006302668,0.00020746453],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.007942222,0.00014958315,0.0010028875,0.00044489736,0.0001255969,0.000041336105,0.00016787347,0.00029017686,0.000023907707],"category_scores_gemma":[0.03161888,0.00012812902,0.00030841256,0.00054156716,0.0001614686,0.00022782627,0.00007340936,0.00058791955,0.000007865256],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035934005,0.00007721764,0.9663344,0.00030096495,0.00023133872,0.000012275371,0.00051155454,0.00014904558,0.014975238,0.00017511578,0.00056071917,0.016312774],"study_design_scores_gemma":[0.03109657,0.0007993617,0.8677402,0.02809575,0.0001593412,0.0022795377,0.0013455547,0.011491886,0.021386044,0.034386843,0.00086615747,0.00035271683],"about_ca_topic_score_codex":0.00002998384,"about_ca_topic_score_gemma":0.000015029102,"teacher_disagreement_score":0.09859418,"about_ca_system_score_codex":0.00048319483,"about_ca_system_score_gemma":0.0007938861,"threshold_uncertainty_score":0.9765382},"labels":[],"label_agreement":null},{"id":"W4408491188","doi":"10.1172/jci186889","title":"Cellular and molecular features of asthma mucus plugs provide clues about their formation and persistence","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Asthma and respiratory diseases","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; University of California, San Francisco; National Institutes of Health; National Heart, Lung, and Blood Institute; Wallonie-Bruxelles International; Fonds Léon Fredericq","keywords":"Persistence (discontinuity); Asthma; Mucus; Biology; Computational biology; Medicine; Immunology; Ecology","score_opus":0.034321048848055216,"score_gpt":0.33085650485908225,"score_spread":0.29653545601102704,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408491188","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9909295,0.0056064073,0.0007376161,0.002246742,0.00009643415,0.0001410809,0.0000022268243,0.0000055971263,0.0002344319],"genre_scores_gemma":[0.9970931,0.00030476617,0.0012050552,0.0012315791,0.00009918374,0.0000011153548,0.0000029431199,0.000004541577,0.000057733392],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9987269,0.00013636613,0.00078040885,0.000096015,0.00018948705,0.00007083681],"domain_scores_gemma":[0.9987052,0.00019696157,0.00055147236,0.00009027341,0.00028603146,0.00017002525],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00064511294,0.00008278383,0.00034125682,0.00010884978,0.00004130967,0.000018721197,0.0000464589,0.00010888729,0.0000026010134],"category_scores_gemma":[0.0012477774,0.000055463064,0.00012963146,0.000098728786,0.00031922493,0.00019990027,0.000023649394,0.00022250922,2.3466718e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001990535,0.0004982479,0.36432293,0.002792544,0.00046521568,0.0001431423,0.0024669874,0.00006681031,0.23273343,0.0031463625,0.004067119,0.3873067],"study_design_scores_gemma":[0.0030625716,0.0016002151,0.8518946,0.0021766277,0.00036615768,0.00009139309,0.0013528535,0.0012438882,0.1259912,0.005331505,0.006751862,0.00013713754],"about_ca_topic_score_codex":0.0000023007758,"about_ca_topic_score_gemma":0.0000011224317,"teacher_disagreement_score":0.4875717,"about_ca_system_score_codex":0.00001144497,"about_ca_system_score_gemma":0.00020845763,"threshold_uncertainty_score":0.2261718},"labels":[],"label_agreement":null},{"id":"W4408563951","doi":"10.1172/jci181754","title":"Absence of the intracellular lipolytic inhibitor G0S2 enhances intravascular triglyceride clearance and abolishes diet-induced hypertriglyceridemia","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Lipid metabolism and disorders","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Nutrition, Metabolism and Diabetes","funders":"National Institute of Diabetes and Digestive and Kidney Diseases","keywords":"Hypertriglyceridemia; Triglyceride; Intracellular; Internal medicine; Endocrinology; Chemistry; Medicine; Biochemistry; Cholesterol","score_opus":0.030175314086885535,"score_gpt":0.32912638342824807,"score_spread":0.2989510693413625,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408563951","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98873734,0.0040437523,0.00016792497,0.0047553033,0.0018406193,0.0002541153,0.000001231728,0.000009844353,0.00018988184],"genre_scores_gemma":[0.99452823,0.002039881,0.00094332226,0.001531323,0.00082065974,0.00000265755,8.1488844e-7,0.000010823107,0.00012226206],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9971681,0.0002646118,0.0017520515,0.00020403962,0.0004465508,0.00016461621],"domain_scores_gemma":[0.997538,0.0005855256,0.0010081241,0.00029957018,0.00036679563,0.00020204326],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018278665,0.00015293717,0.00079892174,0.00011484485,0.000072675124,0.000027249196,0.00019318318,0.00021576705,0.000011861844],"category_scores_gemma":[0.0071165515,0.000095978925,0.00031427116,0.00042962658,0.00058418524,0.00027435372,0.000053711046,0.00065144565,0.000001889403],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006219875,0.00070943404,0.31078124,0.0012303524,0.00083934027,0.000026089809,0.0011341868,0.00010422939,0.5505456,0.0043552136,0.0058757113,0.11817873],"study_design_scores_gemma":[0.0055133807,0.0008383827,0.6892286,0.0017782027,0.0007004442,0.0000345223,0.0004015165,0.0008003508,0.28449315,0.007168456,0.008849997,0.00019302503],"about_ca_topic_score_codex":0.000034058485,"about_ca_topic_score_gemma":0.000005961091,"teacher_disagreement_score":0.37844732,"about_ca_system_score_codex":0.000018259372,"about_ca_system_score_gemma":0.00062856113,"threshold_uncertainty_score":0.8519691},"labels":[],"label_agreement":null},{"id":"W4408906767","doi":"10.1172/jci179881","title":"Prefrontal correlates of fear generalization during endocannabinoid depletion","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cannabis and Cannabinoid Research","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institute of Mental Health; Vetenskapsrådet; Brain and Behavior Research Foundation","keywords":"Endocannabinoid system; Generalization; Neuroscience; Psychology; Medicine; Cognitive psychology; Psychiatry; Clinical psychology; Internal medicine; Mathematics; Receptor","score_opus":0.03853895658295742,"score_gpt":0.37563422956459674,"score_spread":0.3370952729816393,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408906767","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9902168,0.00045242257,0.0005433124,0.0074339937,0.0006218841,0.00021949723,0.0000024680708,0.000010744757,0.0004989122],"genre_scores_gemma":[0.99346966,0.00028702585,0.0007474372,0.0002939778,0.00041964126,0.000004433415,0.000013707647,0.000011827221,0.0047523105],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974203,0.00021247992,0.0015806225,0.00014513591,0.0004925565,0.00014888408],"domain_scores_gemma":[0.99793017,0.00004425954,0.0007755862,0.00016515529,0.0008828605,0.00020196885],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013506524,0.000099901496,0.00047475385,0.00028054137,0.000056539175,0.000019684558,0.00010133127,0.00019187438,0.000059211903],"category_scores_gemma":[0.0025103013,0.000081215585,0.00028401593,0.00035553446,0.00022473051,0.00018534351,0.000035924782,0.00051082874,0.0000032455748],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014176856,0.00038234252,0.8502777,0.0005366915,0.0002386608,0.000034258683,0.00021358678,0.00057805644,0.100843094,0.002066729,0.03697519,0.0064359796],"study_design_scores_gemma":[0.0028584378,0.0006839626,0.9449721,0.0004849813,0.00016497675,0.000070513364,0.0000879141,0.0014917216,0.04443022,0.0014106674,0.0032730019,0.000071510745],"about_ca_topic_score_codex":0.000025674713,"about_ca_topic_score_gemma":0.00000814395,"teacher_disagreement_score":0.09469437,"about_ca_system_score_codex":0.00009351757,"about_ca_system_score_gemma":0.00069094676,"threshold_uncertainty_score":0.33118755},"labels":[],"label_agreement":null},{"id":"W4409415606","doi":"10.1172/jci175241","title":"Virus-associated inflammation imprints an inflammatory profile on monocyte-derived macrophages in the human liver","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune responses and vaccinations","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; Hospital for Sick Children; Princess Margaret Cancer Centre; University of Toronto; Toronto General Hospital; University Health Network; Schwartz/Reisman Emergency Medicine Institute; Toronto Liver Centre","funders":"Canadian Institutes of Health Research","keywords":"Inflammation; Monocyte; Immunology; Virus; Medicine; Biology; Virology","score_opus":0.0561577470107566,"score_gpt":0.37033548886113576,"score_spread":0.31417774185037917,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409415606","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99767774,0.00020880278,0.000033873886,0.0010644316,0.00048263627,0.0002347694,0.0000035500273,0.000014554642,0.00027964634],"genre_scores_gemma":[0.9988407,0.00011012911,0.00005271209,0.00046032493,0.00007520198,0.00001031974,0.00003480344,0.000006763507,0.00040906982],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99643815,0.0019348899,0.0012781033,0.00012783505,0.00007372296,0.00014733248],"domain_scores_gemma":[0.9977584,0.0009173904,0.0008545223,0.00020613532,0.00024158173,0.000021998148],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003179739,0.000112761016,0.00029114145,0.00024284932,0.0001967529,0.00003786822,0.00031088188,0.0002997978,0.00008950687],"category_scores_gemma":[0.0020849113,0.00007994407,0.0001412266,0.00021850642,0.0001439323,0.00027392438,0.000034377434,0.00079009996,0.000052313295],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00091667887,0.00080255116,0.0711254,0.000038443868,0.00033961475,0.000030219066,0.0023648313,0.00016835665,0.8737137,0.010420861,0.0033577085,0.036721654],"study_design_scores_gemma":[0.002098153,0.00046292788,0.9170453,0.00014281852,0.000049184982,0.000006483783,0.00026302662,0.000101235855,0.076209165,0.0023110565,0.0012293917,0.00008127544],"about_ca_topic_score_codex":0.00003671947,"about_ca_topic_score_gemma":0.000087843524,"teacher_disagreement_score":0.84591985,"about_ca_system_score_codex":0.00006369969,"about_ca_system_score_gemma":0.00020687246,"threshold_uncertainty_score":0.34326354},"labels":[],"label_agreement":null},{"id":"W4409528571","doi":"10.1172/jci179395","title":"Disruption of ataxia telangiectasia–mutated kinase enhances radiation therapy efficacy in spatially directed diffuse midline glioma models","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto","funders":"Hyundai Hope On Wheels; National Institute of Neurological Disorders and Stroke; National Cancer Institute; National Institutes of Health; St. Baldrick's Foundation; Pediatric Brain Tumor Foundation; Strong; ChadTough Foundation; Alex's Lemonade Stand Foundation for Childhood Cancer","keywords":"Ataxia-telangiectasia; Glioma; Cancer research; Medicine; Telangiectasia; Radiation therapy; Kinase; Pathology; Biology; Genetics; DNA; Internal medicine; DNA damage","score_opus":0.06218772051057839,"score_gpt":0.38545362114228215,"score_spread":0.3232659006317038,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409528571","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99515593,0.0013533565,0.00027898652,0.0023872778,0.00033440287,0.00040048032,0.000005880464,0.000022139537,0.00006154037],"genre_scores_gemma":[0.99660176,0.0013860986,0.0015203306,0.00023006972,0.00016538844,0.000009267528,0.00006091727,0.000011575,0.000014580891],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9971509,0.00031945607,0.0018623228,0.0001821577,0.00035289768,0.00013224712],"domain_scores_gemma":[0.9973601,0.0008099124,0.0011037926,0.00018061373,0.00039622307,0.00014935274],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009464216,0.0001486971,0.0006775397,0.00045047412,0.000028400756,0.000018140894,0.00008739324,0.0001714445,0.0000150315645],"category_scores_gemma":[0.0018682784,0.000109440385,0.00024954436,0.0006841239,0.00011832203,0.00023930964,0.000013662497,0.0002724415,0.0000020293394],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00514188,0.011321887,0.592522,0.00017499979,0.0008537236,0.00035230003,0.0008667389,0.0033289685,0.20109549,0.00068665127,0.0009520578,0.18270329],"study_design_scores_gemma":[0.014086827,0.0011249485,0.8405121,0.0007540547,0.00020061142,0.000015325088,0.000021316073,0.0117072845,0.12903929,0.002356934,0.000092093156,0.00008921393],"about_ca_topic_score_codex":0.00008866289,"about_ca_topic_score_gemma":0.000034127268,"teacher_disagreement_score":0.24799009,"about_ca_system_score_codex":0.00008049124,"about_ca_system_score_gemma":0.00029378658,"threshold_uncertainty_score":0.44628492},"labels":[],"label_agreement":null},{"id":"W4409737728","doi":"10.1172/jci191021","title":"Ketogenesis mitigates metabolic dysfunction–associated steatotic liver disease through mechanisms that extend beyond fat oxidation","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Diet and metabolism studies","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Nutrition, Metabolism and Diabetes","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; National Institute on Aging; National Institutes of Health; University of Minnesota","keywords":"Ketogenesis; Beta oxidation; Disease; Fatty liver; Medicine; Bioinformatics; Endocrinology; Internal medicine; Ketone bodies; Biology; Metabolism","score_opus":0.08064255911523213,"score_gpt":0.35955924911990655,"score_spread":0.27891669000467445,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409737728","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97879165,0.007359117,0.0038149557,0.006045967,0.0028068828,0.00035422464,0.0000087261815,0.000047942092,0.00077052973],"genre_scores_gemma":[0.98458076,0.004880885,0.004024132,0.004190781,0.0006230754,0.000012024355,0.00003703253,0.000021920736,0.0016293912],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9970415,0.000374044,0.0014581966,0.00026710005,0.00062657957,0.00023257457],"domain_scores_gemma":[0.99690837,0.00061122864,0.0010818352,0.00023006501,0.00081521465,0.0003533169],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014798308,0.0002275848,0.00094455975,0.0002162427,0.00016333193,0.000052803014,0.00012460406,0.00019248037,0.00007163836],"category_scores_gemma":[0.0051112967,0.0001744683,0.0005289028,0.00047869596,0.00025483096,0.00055173173,0.0000545853,0.00039651536,0.0000214329],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022859809,0.0019226925,0.8302213,0.0004615442,0.004502929,0.00018146184,0.0010338101,0.00009923259,0.021085212,0.06103294,0.03510951,0.042063385],"study_design_scores_gemma":[0.0028860816,0.00023114556,0.9076141,0.00047161788,0.00341714,0.0000048166453,0.0002503693,0.00020209227,0.010521929,0.06901943,0.00521993,0.00016131863],"about_ca_topic_score_codex":0.000017363907,"about_ca_topic_score_gemma":0.00001041258,"teacher_disagreement_score":0.077392824,"about_ca_system_score_codex":0.000052889085,"about_ca_system_score_gemma":0.00038508122,"threshold_uncertainty_score":0.711461},"labels":[],"label_agreement":null},{"id":"W4409906434","doi":"10.1172/jci190855","title":"DNA demethylating agents suppress preclinical models of synovial sarcoma","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver Coastal Health Research Institute; University of British Columbia; Vancouver Coastal Health","funders":"Japan Society for the Promotion of Science; European Commission; Deutsches Krebsforschungszentrum; National Cancer Institute; National Institutes of Health; Memorial Sloan-Kettering Cancer Center","keywords":"Synovial sarcoma; DNA; Cancer research; Medicine; Sarcoma; Computational biology; Biology; Genetics; Pathology","score_opus":0.19226261916005719,"score_gpt":0.45014604079974874,"score_spread":0.2578834216396916,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409906434","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9928786,0.0006490845,0.0007034887,0.0036932316,0.0006971468,0.00022392711,0.000003878001,0.000010088575,0.001140526],"genre_scores_gemma":[0.9879148,0.00020967472,0.0102942325,0.0011189827,0.0003643953,0.000004262001,0.0000065197514,0.000010701275,0.0000764537],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9961479,0.00034021953,0.002722897,0.00018030107,0.00046399242,0.00014474335],"domain_scores_gemma":[0.9954053,0.0023216186,0.0012719466,0.00023720905,0.00051659485,0.00024733823],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002147217,0.00012875871,0.00085920934,0.00016472963,0.00003938455,0.000014971171,0.00013751572,0.00022265498,0.000038596827],"category_scores_gemma":[0.004803599,0.000096472424,0.00051575346,0.00022763223,0.00021067937,0.00019134721,0.000053760494,0.00045451144,0.0000033350168],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00069460814,0.0016540734,0.9443122,0.00014782914,0.00071367907,0.00006654233,0.00012776756,0.00035098198,0.0010321499,0.0020611843,0.003925495,0.044913445],"study_design_scores_gemma":[0.00765736,0.0014192499,0.9320295,0.001650261,0.0011429857,0.00003900339,0.00007329648,0.011069808,0.013532031,0.030506078,0.00076342333,0.00011704451],"about_ca_topic_score_codex":0.000013213433,"about_ca_topic_score_gemma":0.0000027383521,"teacher_disagreement_score":0.0447964,"about_ca_system_score_codex":0.000043207114,"about_ca_system_score_gemma":0.0004253217,"threshold_uncertainty_score":0.5750703},"labels":[],"label_agreement":null},{"id":"W4409906436","doi":"10.1172/jci187862","title":"OCA-B promotes pathogenic maturation of stem-like CD4+ T cells and autoimmune demyelination","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Neurological Disorders and Stroke; National Institute of Allergy and Infectious Diseases; National Institutes of Health; Praespero","keywords":"Immunology; Stem cell; Autoimmunity; Medicine; Biology; Cell biology; Antibody","score_opus":0.032527875712360536,"score_gpt":0.3031510460539708,"score_spread":0.27062317034161026,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409906436","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9922485,0.0034023784,0.0007609158,0.0012898936,0.0019910866,0.00017712048,0.0000065408676,0.000016389324,0.00010719658],"genre_scores_gemma":[0.99714804,0.0004840082,0.0007519783,0.00022988382,0.00006866286,0.0000022752736,0.000025058855,0.000007773055,0.0012823087],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99702865,0.00068546477,0.0018946936,0.00017701027,0.000063544576,0.00015063073],"domain_scores_gemma":[0.997121,0.0008067984,0.0014794089,0.0001655259,0.00039815265,0.000029136649],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017992173,0.00013772637,0.00058031623,0.00020904839,0.00009686621,0.000016223445,0.00017633747,0.00049727975,0.000030546515],"category_scores_gemma":[0.0003819011,0.00011111934,0.00017102258,0.00020352793,0.0004870597,0.00022445386,0.000060661656,0.0005840824,0.000020675487],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020202257,0.00011035876,0.010084347,0.000056970137,0.00020093498,0.000001580836,0.00013726966,0.000006926489,0.9620239,0.00086565467,0.00083748123,0.025472548],"study_design_scores_gemma":[0.0031586508,0.0010130272,0.13413808,0.00034152277,0.00034854727,0.000049492148,0.00018673849,0.00009488529,0.8454977,0.0082267,0.0067744427,0.0001702073],"about_ca_topic_score_codex":0.00000929235,"about_ca_topic_score_gemma":0.000003176844,"teacher_disagreement_score":0.12405374,"about_ca_system_score_codex":0.000022461072,"about_ca_system_score_gemma":0.00024224745,"threshold_uncertainty_score":0.45313153},"labels":[],"label_agreement":null},{"id":"W4410004411","doi":"10.1172/jci192414","title":"GLP-1 receptor agonists for the treatment of alcohol use disorder","year":2025,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"Diabetes Treatment and Management","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotchkiss Brain Institute; University of Calgary","funders":"Canadian Institutes of Health Research; University of Calgary","keywords":"Alcohol use disorder; Alcohol; Receptor; Pharmacology; Agonist; Medicine; Chemistry; Internal medicine; Biochemistry","score_opus":0.14370850584484934,"score_gpt":0.4054309508184011,"score_spread":0.26172244497355174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410004411","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.034098372,0.0013244245,0.00037619224,0.95885926,0.0030515855,0.0019357634,0.000069453665,0.000015253886,0.00026967347],"genre_scores_gemma":[0.0054911715,0.020320658,0.021738729,0.8363647,0.02191443,0.00030296785,0.0015123541,0.00013684726,0.09221817],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9973048,0.00014817319,0.0017451568,0.00020247973,0.00041781605,0.00018155342],"domain_scores_gemma":[0.99429446,0.003043692,0.0017242709,0.00037009906,0.00047123112,0.00009627132],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00064281304,0.0002404922,0.0010533058,0.0001575275,0.000054104537,0.00004257043,0.00015155568,0.00043659293,0.000045522567],"category_scores_gemma":[0.0012011615,0.00013155297,0.001042298,0.00013112563,0.0002309306,0.00010921097,0.000017899345,0.000482458,0.000005945874],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002890073,0.00045494703,0.01717566,0.0002524819,0.0023715924,0.000019189967,0.00005840691,0.000007297904,0.000012264689,0.00006550774,0.9361453,0.043148316],"study_design_scores_gemma":[0.0044161435,0.0036472355,0.010369637,0.0005728472,0.003915267,0.0000021289834,0.000013761168,0.00008299439,0.00019886032,0.000627202,0.9760583,0.00009560891],"about_ca_topic_score_codex":0.000021776441,"about_ca_topic_score_gemma":0.000005003849,"teacher_disagreement_score":0.12249461,"about_ca_system_score_codex":0.00011815195,"about_ca_system_score_gemma":0.00035161382,"threshold_uncertainty_score":0.5364574},"labels":[],"label_agreement":null},{"id":"W4410004544","doi":"10.1172/jci191907","title":"The differential effects of sex hormone therapy on kidney function: insights into biological sex differences","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Sex and Gender in Healthcare","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of Alberta","funders":"Canadian Institutes of Health Research; Kidney Foundation of Canada","keywords":"Sex hormone-binding globulin; Hormone; Function (biology); Differential effects; Sex characteristics; Hormone therapy; Differential (mechanical device); Medicine; Physiology; Internal medicine; Biology; Bioinformatics; Evolutionary biology","score_opus":0.1237071417206408,"score_gpt":0.405519888355408,"score_spread":0.2818127466347672,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410004544","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98675174,0.0019942024,0.00046932517,0.008365876,0.0019463373,0.00026690945,4.2752637e-7,0.000013004633,0.00019218582],"genre_scores_gemma":[0.9893332,0.0035759138,0.000114389884,0.0057826955,0.00096686924,0.000006276989,0.0000054073325,0.0000057407815,0.00020952414],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9971914,0.0007650794,0.0013272422,0.00018663278,0.00039910676,0.0001305235],"domain_scores_gemma":[0.99511576,0.0034664858,0.00060253177,0.00023578496,0.00029693378,0.0002825362],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000963462,0.00013775442,0.000579859,0.00010423198,0.00014862245,0.000020832273,0.00015307279,0.00027116342,0.000010251545],"category_scores_gemma":[0.0031608082,0.00006700628,0.00025553437,0.00021384303,0.00038473605,0.00005065328,0.000024796647,0.00067358377,0.0000025468692],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0053418656,0.0009185396,0.47661617,0.0003310976,0.00098176,0.000025093845,0.0019029933,0.0000028939219,0.019926127,0.004502412,0.015213656,0.47423738],"study_design_scores_gemma":[0.003542421,0.0075322674,0.9235532,0.0004440982,0.00010023419,0.000005942274,0.00026423688,0.00020854539,0.012817,0.042293217,0.009154086,0.00008472314],"about_ca_topic_score_codex":0.000011891815,"about_ca_topic_score_gemma":0.0000018478246,"teacher_disagreement_score":0.47415265,"about_ca_system_score_codex":0.000027559587,"about_ca_system_score_gemma":0.00039115234,"threshold_uncertainty_score":0.3784011},"labels":[],"label_agreement":null},{"id":"W4410345613","doi":"10.1172/jci172988","title":"LAG3 regulates antibody responses in a murine model of kidney transplantation","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Renal Transplantation Outcomes and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; American Society of Transplantation","keywords":"Transplantation; Kidney transplantation; Antibody; Immunology; Biology; Medicine; Cell biology; Cancer research; Internal medicine","score_opus":0.08851183993508466,"score_gpt":0.4386177811011775,"score_spread":0.35010594116609284,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410345613","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931115,0.00007473205,0.0022701563,0.0037828868,0.00014853677,0.0001404539,0.000013218907,0.000005558554,0.0004529716],"genre_scores_gemma":[0.9885742,0.001006572,0.008766305,0.0010168538,0.000039577997,0.0000012824548,0.000039041643,0.0000057710117,0.00055037596],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979149,0.00014837085,0.0015183778,0.00009999101,0.0002393219,0.00007904908],"domain_scores_gemma":[0.99851525,0.00047172728,0.00052422954,0.00009642006,0.00022037371,0.00017202632],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00092601636,0.000084718595,0.00047185522,0.00031191634,0.000015389742,0.0000064228116,0.000054655335,0.00010773951,0.000009467372],"category_scores_gemma":[0.0011433177,0.000063115636,0.00018657354,0.0002521055,0.00009558926,0.00015256513,0.0000034947218,0.00020980655,0.0000011348127],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004234837,0.00037456298,0.95967853,0.00071294897,0.00019440423,0.00008134785,0.0002701966,0.0017719372,0.029755253,0.0013669995,0.00011951157,0.0014394659],"study_design_scores_gemma":[0.0086659435,0.00054728624,0.9362628,0.0035313435,0.0003771276,0.000052261355,0.000028334689,0.009837414,0.032575022,0.008018808,0.00003810467,0.00006553742],"about_ca_topic_score_codex":0.000013006757,"about_ca_topic_score_gemma":0.000004132787,"teacher_disagreement_score":0.023415718,"about_ca_system_score_codex":0.000022271788,"about_ca_system_score_gemma":0.00061536924,"threshold_uncertainty_score":0.2573781},"labels":[],"label_agreement":null},{"id":"W4410930193","doi":"10.1172/jci180190","title":"4E-BP1–dependent translation in microglia controls mechanical hypersensitivity in male and female mice","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Neuroinflammation and Neurodegeneration Mechanisms","field":"Neuroscience","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill Genome Centre; McGill University","funders":"Canadian Institutes of Health Research","keywords":"Microglia; Translation (biology); Medicine; Immunology; Neuroscience; Pathology; Biology; Inflammation; Genetics","score_opus":0.10501605039489154,"score_gpt":0.35976996949390055,"score_spread":0.254753919099009,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410930193","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9919524,0.000032764005,0.0017871985,0.0050507416,0.0006043294,0.00025764128,0.0000029878663,0.000011378492,0.0003005647],"genre_scores_gemma":[0.9949136,0.00015312797,0.0012763318,0.0034043284,0.00008804024,0.0000032999808,8.8112563e-7,0.000007639757,0.00015274664],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99655575,0.0011369485,0.0015643295,0.000296076,0.00029692057,0.00014995348],"domain_scores_gemma":[0.9974644,0.0017164545,0.00050242234,0.000112043264,0.000081577375,0.00012307937],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022667698,0.00012072746,0.00040073064,0.00030106807,0.000048609203,0.000062823376,0.000112340575,0.00015448245,0.000013309092],"category_scores_gemma":[0.003987044,0.00011428049,0.000094670795,0.0003338835,0.0001016886,0.00041507196,0.000024354284,0.0005728415,0.000006488851],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022319924,0.00010576254,0.004421074,0.000016105447,0.0000024190163,0.000077586636,0.00008723033,0.00023900883,0.9841174,0.0054069883,0.000023042072,0.005280197],"study_design_scores_gemma":[0.004427858,0.00023161783,0.025981138,0.00014142395,0.000023339366,0.00011197865,0.00006491483,0.018487696,0.94116217,0.00896053,0.00026456354,0.00014274933],"about_ca_topic_score_codex":0.0000055647047,"about_ca_topic_score_gemma":0.00008676133,"teacher_disagreement_score":0.042955197,"about_ca_system_score_codex":0.00003087037,"about_ca_system_score_gemma":0.0001517643,"threshold_uncertainty_score":0.47731525},"labels":[],"label_agreement":null},{"id":"W4410930202","doi":"10.1172/jci183796","title":"PIEZO1 mediates mechanical reprogramming of neutrophils for proangiogenic specialization in the lung","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Erythrocyte Function and Pathophysiology","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; McGill University","funders":"National Natural Science Foundation of China","keywords":"Reprogramming; Lung; Cell biology; Biology; Immunology; Chemistry; Medicine; Cell; Internal medicine; Genetics","score_opus":0.08271715039313383,"score_gpt":0.40650811361411887,"score_spread":0.32379096322098505,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410930202","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98107433,0.00038199022,0.008181526,0.008489855,0.0011063283,0.00058529014,0.0000013371769,0.000007670473,0.0001716477],"genre_scores_gemma":[0.99136716,0.00019133915,0.005301412,0.0020834608,0.0009818162,0.000012292586,0.000015828686,0.000006321947,0.000040391264],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978466,0.00028070834,0.0014655233,0.00011988853,0.00019159267,0.000095671094],"domain_scores_gemma":[0.9975779,0.0011287209,0.000739451,0.00014397751,0.00035093396,0.000058996244],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0027716076,0.00006939714,0.00042632432,0.00015500495,0.000028283732,0.000008033672,0.00009519193,0.00016256115,0.000010003537],"category_scores_gemma":[0.004340309,0.0000446286,0.0002883307,0.00036490272,0.00011656532,0.000075601565,0.000012182927,0.0002714859,6.7710295e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011526205,0.0028775858,0.5995986,0.0020453988,0.0010539993,0.00006874802,0.0022920326,0.00064418063,0.09913115,0.10151578,0.04395759,0.13528875],"study_design_scores_gemma":[0.016978955,0.007263978,0.7800707,0.0020900988,0.0017009734,0.0001373284,0.0010835748,0.016329834,0.0204977,0.13500047,0.018547537,0.0002988198],"about_ca_topic_score_codex":0.000003348443,"about_ca_topic_score_gemma":0.000004945073,"teacher_disagreement_score":0.18047215,"about_ca_system_score_codex":0.000024400186,"about_ca_system_score_gemma":0.00028131116,"threshold_uncertainty_score":0.5196069},"labels":[],"label_agreement":null},{"id":"W4410930213","doi":"10.1172/jci187490","title":"PROX1 is an early driver of lineage plasticity in prostate cancer","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Dental and Craniofacial Research; Canadian Institutes of Health Research; National Institute of General Medical Sciences; Institute for Prostate Cancer Research; Terry Fox Research Institute; National Cancer Institute; National Institutes of Health; BC Cancer Foundation; Prostate Cancer Foundation","keywords":"Prostate cancer; Lineage (genetic); Prostate; Plasticity; Biology; Cancer research; Cancer; Internal medicine; Medicine; Oncology; Genetics; Gene; Physics","score_opus":0.11794641767646559,"score_gpt":0.4652361321358967,"score_spread":0.34728971445943113,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410930213","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952337,0.00023866571,0.00003249088,0.0038044269,0.00021651432,0.0002859053,0.00000802079,0.000004401129,0.00017583402],"genre_scores_gemma":[0.9964765,0.00063875964,0.0008950434,0.0005658603,0.0001807094,0.000006951439,0.0000037232294,0.0000065819354,0.0012258741],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99815583,0.00013338123,0.0011323012,0.00012915318,0.00031989743,0.00012941365],"domain_scores_gemma":[0.99851054,0.00023255854,0.00046614383,0.00009451094,0.00051517494,0.00018106766],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007570952,0.00007947865,0.00044044456,0.00020379489,0.000019931176,0.000011801978,0.00008004782,0.00009998277,0.000040862236],"category_scores_gemma":[0.0007516191,0.000054709988,0.00011345541,0.00032910722,0.00024652973,0.00021779259,0.000021047768,0.0004858666,0.0000018095302],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014543498,0.00031380865,0.9860902,0.00014187228,0.00010223355,0.00003796998,0.00056467904,0.00003116654,0.004395842,0.000068526126,0.0008356065,0.005963766],"study_design_scores_gemma":[0.0045897504,0.0013567929,0.9440051,0.0010451095,0.00010969301,0.0000024263245,0.00006073669,0.00095619296,0.04634506,0.0011071479,0.00037350957,0.000048496946],"about_ca_topic_score_codex":0.00010970362,"about_ca_topic_score_gemma":0.000032856184,"teacher_disagreement_score":0.042085093,"about_ca_system_score_codex":0.00007451182,"about_ca_system_score_gemma":0.0010594783,"threshold_uncertainty_score":0.22310086},"labels":[],"label_agreement":null},{"id":"W4411176523","doi":"10.1172/jci186065","title":"TNF-α impairs platelet function by inhibiting autophagy and disrupting metabolism via syntaxin 17 downregulation","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Bioinformatics Solutions (Canada)","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Heart, Lung, and Blood Institute; University of Colorado School of Medicine, Anschutz Medical Campus; Anschutz Medical Campus, University of Colorado; Uniformed Services University of the Health Sciences","keywords":"Downregulation and upregulation; Autophagy; Cell biology; Function (biology); Metabolism; Chemistry; Platelet; Tumor necrosis factor alpha; Biology; Immunology; Biochemistry; Gene; Apoptosis","score_opus":0.027540655677919582,"score_gpt":0.35635126729433847,"score_spread":0.3288106116164189,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411176523","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98789054,0.0018769862,0.0069485647,0.0022804479,0.0004886301,0.00018244922,0.0000028398986,0.00003358119,0.00029596966],"genre_scores_gemma":[0.99512076,0.00017552241,0.0014235107,0.0022458672,0.0006607868,0.0000032148703,0.00002523557,0.000013423225,0.00033164938],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.997646,0.00020526952,0.0014947838,0.00019178049,0.0003085102,0.00015370395],"domain_scores_gemma":[0.9979533,0.0004553414,0.0009728674,0.000115076225,0.00024555772,0.00025785132],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017750054,0.0001457518,0.000529972,0.00016989134,0.000115739225,0.000043969794,0.000053742344,0.00021455468,0.00004292638],"category_scores_gemma":[0.0010990864,0.000118321725,0.00020591679,0.00024515289,0.00016453743,0.00039014494,0.00002424179,0.00048184922,0.0000032048065],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0034782272,0.0006377199,0.06068221,0.00039089666,0.001432095,0.000102123064,0.0005844996,0.00027209404,0.27796805,0.0038192878,0.01728166,0.63335115],"study_design_scores_gemma":[0.007988037,0.0008086132,0.8649052,0.001024441,0.0010012999,0.00014692968,0.00021402045,0.010167653,0.078416325,0.029883338,0.0051837326,0.00026043542],"about_ca_topic_score_codex":0.000009470185,"about_ca_topic_score_gemma":0.0000010051242,"teacher_disagreement_score":0.80422294,"about_ca_system_score_codex":0.000039672417,"about_ca_system_score_gemma":0.000196142,"threshold_uncertainty_score":0.48250198},"labels":[],"label_agreement":null},{"id":"W4411488183","doi":"10.1172/jci177430","title":"Neuraminidase 1 secondary deficiency contributes to CNS pathology in neurological mucopolysaccharidoses via brain protein hypersialylation","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Lysosomal Storage Disorders Research","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Neurological Institute and Hospital; Université de Montréal; University of Alberta; McGill University; Centre Hospitalier Universitaire Sainte-Justine","funders":"Canadian MPS Society for Mucopolysaccharide and Related Diseases; National Institute of General Medical Sciences; Canadian Glycomics Network; Canadian Institutes of Health Research; Sanfilippo Children's Foundation","keywords":"Mucopolysaccharidosis; Lysosomal storage disease; Polysialic acid; Biology; Cathepsin A; Neuraminidase; Cathepsin D; Glycan; Sialidase; Pathology; Cell biology; Neuroscience; Glycoprotein; Medicine; Biochemistry; Enzyme","score_opus":0.056519394432058286,"score_gpt":0.39154911086544214,"score_spread":0.33502971643338386,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411488183","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93845767,0.0003057622,0.002307917,0.05761521,0.0003437678,0.0006653293,0.0000024682781,0.0000169588,0.00028489338],"genre_scores_gemma":[0.98796886,0.000017191167,0.0013068479,0.010379095,0.00014359137,0.000016163023,0.000007657043,0.000010030056,0.00015058264],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9965358,0.0007794354,0.0017110001,0.0002963593,0.00039567437,0.000281781],"domain_scores_gemma":[0.99726945,0.0013353461,0.00043437764,0.0002002043,0.00048505585,0.00027555515],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0031117192,0.00014206501,0.0006589874,0.00059755036,0.00006530171,0.000033920005,0.00020615505,0.0003134238,0.000059126978],"category_scores_gemma":[0.025577364,0.000114289,0.0001968789,0.00091912923,0.00030945707,0.0001977484,0.00008242303,0.0011818421,0.000018235445],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002792061,0.0010261313,0.79414845,0.00014889952,0.00006322636,0.0011104114,0.00023203545,0.0001363488,0.1125459,0.0014616449,0.0033918896,0.08294298],"study_design_scores_gemma":[0.004692814,0.0027617724,0.9716502,0.00022478137,0.00006426023,0.00012331145,0.00009102723,0.0020935957,0.00483579,0.012400423,0.00094505044,0.00011699528],"about_ca_topic_score_codex":0.000020570742,"about_ca_topic_score_gemma":0.000025689991,"teacher_disagreement_score":0.17750171,"about_ca_system_score_codex":0.00006095503,"about_ca_system_score_gemma":0.00076891505,"threshold_uncertainty_score":0.9826306},"labels":[],"label_agreement":null},{"id":"W4411872495","doi":"10.1172/jci184043","title":"Targeting immune checkpoint LAIR1 with antibody blockade or 3-in-1 CAR T cells enhances antitumor response","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"CAR-T cell therapy research","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pediatric Oncology Group","funders":"National Cancer Institute","keywords":"Blockade; Blocking (statistics); Blocking antibody; Immune system; Immune checkpoint; Antibody; Immunology; Cancer research; Medicine; Chemistry; Immunotherapy; Receptor; Computer science; Internal medicine","score_opus":0.05981472004056149,"score_gpt":0.43013826727697013,"score_spread":0.37032354723640865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411872495","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99124384,0.00039744537,0.0002897625,0.0069843386,0.00043890488,0.00033566586,0.000001409723,0.000014993137,0.00029366088],"genre_scores_gemma":[0.9884126,0.0006677681,0.0053511895,0.00052891986,0.00048704311,0.0000037260006,0.0000051482602,0.00002113666,0.004522464],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9960802,0.00072750286,0.0020820557,0.00023309526,0.0006060328,0.0002710733],"domain_scores_gemma":[0.9964397,0.0017492146,0.00080601516,0.00024984195,0.0005123416,0.0002429008],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.007867296,0.00015748126,0.00081140146,0.00037971415,0.000060512808,0.000043007247,0.00018822872,0.0001657591,0.0003042706],"category_scores_gemma":[0.0051736482,0.00010257379,0.00021709646,0.00070278725,0.00037455402,0.00018790568,0.000042881995,0.0011123369,0.000011388217],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.017511098,0.00022175975,0.035333265,0.00011427834,0.00012470024,0.0004957097,0.00019046383,0.00010118922,0.9443225,0.000013296594,0.00028050822,0.0012912054],"study_design_scores_gemma":[0.0065550767,0.0029898467,0.16352628,0.0020855267,0.00012879273,0.00013125713,0.00041557165,0.0010442293,0.8174779,0.00026453473,0.005226585,0.00015441324],"about_ca_topic_score_codex":0.000031536816,"about_ca_topic_score_gemma":0.000012408891,"teacher_disagreement_score":0.128193,"about_ca_system_score_codex":0.00011083679,"about_ca_system_score_gemma":0.0017382718,"threshold_uncertainty_score":0.6193714},"labels":[],"label_agreement":null},{"id":"W4411872561","doi":"10.1172/jci188530","title":"Targeting the IL-36 receptor with spesolimab mitigates residual inflammation and prevents generalized pustular psoriasis flares","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Psoriasis: Treatment and Pathogenesis","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases","keywords":"Psoriasis; Inflammation; Generalized pustular psoriasis; Medicine; Pustular psoriasis; Immunology; Receptor; Dermatology; Internal medicine","score_opus":0.032138088779788146,"score_gpt":0.30661382459766606,"score_spread":0.27447573581787793,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411872561","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9924337,0.0024666172,0.00011112304,0.003717614,0.0009615709,0.00021590477,0.0000120513305,0.000015296942,0.000066110224],"genre_scores_gemma":[0.9928516,0.0014797003,0.0037341327,0.00031557592,0.00057567115,0.000013999408,0.00009108603,0.000013844542,0.00092435064],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997488,0.0010011197,0.0010800824,0.00017702568,0.00008846066,0.00016527763],"domain_scores_gemma":[0.9979147,0.0008166442,0.0008562413,0.00014219816,0.00022827313,0.00004195864],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018511643,0.00015407447,0.0004038356,0.000104286504,0.00022758919,0.000043627417,0.0001615784,0.000241863,0.000043121076],"category_scores_gemma":[0.0012836859,0.00009068446,0.00011382624,0.00017264503,0.00030889988,0.00022981278,0.000040780626,0.00032212757,0.0000132172545],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005486777,0.00031882268,0.38153508,0.00014487332,0.0040662778,0.000022356062,0.0022247727,0.0003031989,0.42936575,0.0025579582,0.03378565,0.14018849],"study_design_scores_gemma":[0.016344672,0.001687606,0.29854563,0.00097605115,0.0022614736,0.00008481056,0.0011378634,0.00010916725,0.6149073,0.01085701,0.05259016,0.0004982379],"about_ca_topic_score_codex":0.00001556618,"about_ca_topic_score_gemma":0.000008812893,"teacher_disagreement_score":0.18554156,"about_ca_system_score_codex":0.000023374752,"about_ca_system_score_gemma":0.0001790163,"threshold_uncertainty_score":0.3698005},"labels":[],"label_agreement":null},{"id":"W4412430336","doi":"10.1172/jci168962","title":"Organ-specific features of human kidney lymphatics are disrupted in chronic transplant rejection","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Genetic Syndromes and Imprinting","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Foulkes Foundation; Rosetrees Trust; Kidney Research UK; National Institute for Health and Care Research; Wellcome Trust","keywords":"Lymphatic system; Kidney; Kidney transplantation; Pathology; Medicine; Organ transplantation; Graft rejection; Transplant rejection; Immunology; Transplantation; Biology; Immune system; Internal medicine","score_opus":0.03431954953857322,"score_gpt":0.3447410962103921,"score_spread":0.31042154667181887,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412430336","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99745303,0.00070449995,0.000688097,0.00050463126,0.0003882623,0.00007343191,0.0000027362323,0.0000019637243,0.00018333823],"genre_scores_gemma":[0.99791026,0.00075694383,0.0007254174,0.00019528976,0.00026169245,9.492082e-7,0.00001759629,0.000007197909,0.00012467567],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99843925,0.00014002284,0.0010583961,0.00013379277,0.00012824727,0.000100284844],"domain_scores_gemma":[0.9988988,0.00004298626,0.00066598534,0.00014431533,0.00016268209,0.000085238],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00074109685,0.00008469723,0.00027309236,0.000098542005,0.00003070722,0.000012913883,0.00013027393,0.00018517493,0.000007221238],"category_scores_gemma":[0.00051649066,0.00007410171,0.00013542228,0.00016726484,0.00010344417,0.000006238306,0.000022162401,0.00016256426,4.432424e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004113839,0.00008181755,0.24715324,0.00010344398,0.000071001596,0.000002897933,0.00006533541,0.00017586756,0.7455932,0.00016091079,0.0018189676,0.004732207],"study_design_scores_gemma":[0.0013988126,0.00049037713,0.80202323,0.00049928785,0.000035964225,0.000021691876,0.00007476743,0.00007018454,0.19264916,0.00080286135,0.0018538968,0.00007976212],"about_ca_topic_score_codex":0.000009714931,"about_ca_topic_score_gemma":0.00002303448,"teacher_disagreement_score":0.55487,"about_ca_system_score_codex":0.000030222101,"about_ca_system_score_gemma":0.00030014454,"threshold_uncertainty_score":0.30217797},"labels":[],"label_agreement":null},{"id":"W4412492077","doi":"10.1172/jci187371","title":"Aggressive B cell lymphomas retain ATR-dependent determinants of T cell exclusion from the germinal center dark zone","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Occupational Cancer Research Centre","funders":"National Medical Research Council; Medical Research Council; National Cancer Institute; National Institutes of Health; Associazione Italiana per la Ricerca sul Cancro; Ministero dell’Istruzione, dell’Università e della Ricerca; European Commission; Università degli Studi di Milano","keywords":"Germinal center; Biology; B cell; Immune system; T cell; Cell; Transcriptome; Cancer research; Cell biology; Molecular biology; Immunology; Gene expression; Antibody; Genetics; Gene","score_opus":0.030745013754318016,"score_gpt":0.31081970261875674,"score_spread":0.2800746888644387,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412492077","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9914536,0.0039013652,0.00022055485,0.00079187186,0.0027192852,0.00016717475,0.000028984707,0.00001011856,0.00070706627],"genre_scores_gemma":[0.9940488,0.0007623674,0.00039784034,0.00077890005,0.00017423097,0.0000024472015,0.000030429544,0.000012427904,0.0037925786],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9959074,0.0012501198,0.0021845456,0.00026881867,0.00012233465,0.00026677267],"domain_scores_gemma":[0.9943089,0.001774097,0.0031446756,0.00038194895,0.0003383348,0.000052050957],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015550912,0.00021030285,0.0007418272,0.00011536641,0.00018814909,0.000018176721,0.0005978816,0.0005627243,0.00017748657],"category_scores_gemma":[0.0007516337,0.00013709781,0.00037731632,0.00015520578,0.000781752,0.00014252873,0.00024100767,0.0008336882,0.000075298],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00080047053,0.00047752514,0.13225783,0.000031871543,0.00013390365,0.00005064424,0.0003204705,0.000006705399,0.84519535,0.000025997011,0.010476566,0.010222633],"study_design_scores_gemma":[0.007156284,0.00084552844,0.064728595,0.0005785333,0.00035920486,0.00010737114,0.00043359172,0.000051858973,0.91556394,0.00321256,0.006761992,0.00020051502],"about_ca_topic_score_codex":0.00009848549,"about_ca_topic_score_gemma":0.000035752575,"teacher_disagreement_score":0.07036859,"about_ca_system_score_codex":0.000046573256,"about_ca_system_score_gemma":0.00045723876,"threshold_uncertainty_score":0.5590686},"labels":[],"label_agreement":null},{"id":"W4412711430","doi":"10.1172/jci192589","title":"Reduced vaccine-induced germinal center outputs in patients with inflammatory bowel disease treated with anti-TNF biologics","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Sinai Health System; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; Krembil Foundation; University of Toronto","funders":"Institute of Genetics; Canadian Institutes of Health Research; University of Toronto; Gilead Sciences; Amgen; Pfizer; Canada Research Chairs; Government of Ontario; AstraZeneca; Eli Lilly and Company; Bristol-Myers Squibb","keywords":"Inflammatory bowel disease; Germinal center; Medicine; Tumor necrosis factor alpha; Disease; Infliximab; Center (category theory); Immunology; Internal medicine; Antibody; Chemistry","score_opus":0.018031840978464057,"score_gpt":0.2990190200965459,"score_spread":0.28098717911808185,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412711430","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99908173,0.000030105359,0.000041670373,0.00028010338,0.00018850947,0.00029500574,0.00001114476,0.000008415082,0.00006334249],"genre_scores_gemma":[0.99871343,0.000020815913,0.0002526315,0.0006559854,0.00019026885,0.00000700358,0.00008824947,0.000017469692,0.000054117285],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99780077,0.00033231653,0.0011167949,0.00029521846,0.0002410679,0.00021386099],"domain_scores_gemma":[0.9980378,0.000046480538,0.0007821956,0.0002935887,0.000520274,0.00031965078],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006035089,0.0002113162,0.00031694083,0.00015412034,0.000049147307,0.000029808243,0.00020940871,0.00020941759,0.000004917779],"category_scores_gemma":[0.00077661057,0.00014695556,0.00013203622,0.00015016797,0.0001219511,0.000031824256,0.000050216593,0.00031518357,0.0000026439748],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0047664973,0.0003118757,0.9911553,0.000042317668,0.00010242425,0.00012165181,0.000011203922,0.00012762297,0.0025169868,0.00003144832,0.00036360833,0.00044901358],"study_design_scores_gemma":[0.0057816827,0.0006672177,0.990256,0.00026750015,0.000088551744,0.0000024322096,0.000012849612,0.000055595166,0.0024429196,0.00008635373,0.00016306469,0.00017584361],"about_ca_topic_score_codex":0.0000015153176,"about_ca_topic_score_gemma":0.00001244794,"teacher_disagreement_score":0.0010151853,"about_ca_system_score_codex":0.00003584228,"about_ca_system_score_gemma":0.0006707864,"threshold_uncertainty_score":0.59926736},"labels":[],"label_agreement":null},{"id":"W4412711468","doi":"10.1172/jci194081","title":"Factors associated with resistance of HIV-1 reservoir viruses to neutralization by autologous IgG antibodies","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Maple Leaf Medical Clinic","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; National Institutes of Health; Philadelphia Foundation; Howard Hughes Medical Institute","keywords":"Neutralization; Antibody; Virology; Immunology; Human immunodeficiency virus (HIV); Immunoglobulin G; Biology; Medicine","score_opus":0.15473638746877152,"score_gpt":0.4317657978513087,"score_spread":0.27702941038253714,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412711468","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.988266,0.00029495225,0.0003527365,0.010043527,0.00016277323,0.00017894954,0.00003386677,0.00001304074,0.000654154],"genre_scores_gemma":[0.9936185,0.00013195723,0.0008621924,0.0013572394,0.00009235957,0.0000015267278,0.000043384865,0.000010874984,0.0038819981],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99747044,0.00029041333,0.001339567,0.00016108151,0.0005622894,0.00017623487],"domain_scores_gemma":[0.99669397,0.0011952777,0.0007545792,0.00014599567,0.00096718036,0.00024298503],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011631139,0.00013126715,0.0006851015,0.00021678305,0.00007096963,0.000019268675,0.00015632003,0.00015505198,0.000022389982],"category_scores_gemma":[0.005706121,0.000084201056,0.0001651154,0.0005547522,0.00034286993,0.00014894083,0.000035436467,0.00040722924,0.0000021373496],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013337106,0.00020923198,0.9323694,0.00013619535,0.00029731693,0.0000118238895,0.00016602168,0.00008608696,0.008844632,0.0007886148,0.055539336,0.00021760618],"study_design_scores_gemma":[0.0012006013,0.0009775836,0.95069546,0.001478646,0.00015150386,0.000002029516,0.00009595265,0.00010542412,0.03489834,0.0012997312,0.009000455,0.00009425353],"about_ca_topic_score_codex":0.000024801053,"about_ca_topic_score_gemma":0.00007540294,"teacher_disagreement_score":0.04653888,"about_ca_system_score_codex":0.000048943195,"about_ca_system_score_gemma":0.00043946854,"threshold_uncertainty_score":0.6831172},"labels":[],"label_agreement":null},{"id":"W4412938500","doi":"10.1172/jci195258","title":"Integrin α4β7 as a predictor of HIV acquisition: one thread in a complex tapestry","year":2025,"lang":"en","type":"letter","venue":"Journal of Clinical Investigation","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Human immunodeficiency virus (HIV); Thread (computing); Integrin; Computational biology; Medicine; Biology; Virology; Computer science; Internal medicine; Receptor; Programming language","score_opus":0.11010917078388846,"score_gpt":0.38687380047833647,"score_spread":0.27676462969444804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412938500","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.30951768,0.0018684601,0.00015730917,0.68345255,0.0013820381,0.00063934264,0.00046448415,0.000023255236,0.0024948649],"genre_scores_gemma":[0.48333743,0.002755654,0.005473672,0.4673166,0.0075677107,0.00009344805,0.011687554,0.00010675966,0.021661177],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9956489,0.0012068528,0.0023901162,0.00025740455,0.00020654133,0.000290141],"domain_scores_gemma":[0.99599314,0.0016855642,0.0015339557,0.00028130642,0.00043823753,0.00006779739],"candidate_categories":["research_integrity","insufficient_payload"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.0013521087,0.00022544981,0.0011696852,0.00039936634,0.000042566116,0.000016844035,0.00039236096,0.001424596,0.001051322],"category_scores_gemma":[0.0017463105,0.00017960765,0.00041233323,0.00022421725,0.00071194884,0.0001192571,0.000087517976,0.0038566042,0.00027278592],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00054307707,0.0004110378,0.027416557,0.00021455812,0.0008867604,0.00027879796,0.00010335609,0.0000036021415,0.0014706283,0.00017391604,0.9664976,0.0020000893],"study_design_scores_gemma":[0.013734591,0.004577361,0.21752325,0.00525102,0.00069848046,0.00032817095,0.00010887326,0.000012449178,0.0042912685,0.026842715,0.7261706,0.00046122752],"about_ca_topic_score_codex":0.000056632613,"about_ca_topic_score_gemma":0.000013292048,"teacher_disagreement_score":0.24032703,"about_ca_system_score_codex":0.00010644027,"about_ca_system_score_gemma":0.0012195522,"threshold_uncertainty_score":0.9998718},"labels":[],"label_agreement":null},{"id":"W4413315181","doi":"10.1172/jci190989","title":"A distinct mechanism of epigenetic reprogramming silences PAX2 and initiates endometrial carcinogenesis","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Renal and related cancers","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"L'Alliance Boviteq","funders":"National Cancer Institute; Japan Society for the Promotion of Science; National Institutes of Health; Cancer Prevention and Research Institute of Texas; Mary Kay Foundation","keywords":"Reprogramming; Epigenetics; Carcinogenesis; Mechanism (biology); Epigenesis; Biology; Cell biology; DNA methylation; Cancer research; Endometrial cancer; Genetics; Cancer; Gene; Gene expression; Physics","score_opus":0.03955910198113187,"score_gpt":0.34936482612908704,"score_spread":0.30980572414795515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413315181","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99467945,0.0029379225,0.00132309,0.00026094797,0.0005559591,0.00007411104,0.0000023666125,0.0000018546503,0.00016428105],"genre_scores_gemma":[0.9962999,0.0020249162,0.0012277572,0.00011259174,0.00028508267,0.0000019717363,0.000004445615,0.0000043600908,0.000038972525],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99855566,0.00016925324,0.0009114376,0.00014391569,0.00013505068,0.00008469814],"domain_scores_gemma":[0.99876165,0.00021301692,0.0006395826,0.000096532254,0.00020030721,0.000088903915],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010286291,0.00007671042,0.0002716089,0.0000886138,0.000036118894,0.000013304156,0.000100214675,0.00017125755,0.0000022587076],"category_scores_gemma":[0.002318055,0.000056768517,0.00015881103,0.00017138658,0.00022413534,0.000005793271,0.000039814066,0.00013201365,2.0712781e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010950044,0.00016616638,0.3307814,0.00025753534,0.00086578,0.000017585713,0.00013764709,0.00012729607,0.5174221,0.0023544347,0.0003910235,0.14638405],"study_design_scores_gemma":[0.002715451,0.0022425011,0.087205954,0.00048694148,0.0003693373,0.000029969331,0.00018079352,0.00015714532,0.885928,0.018909177,0.0015949648,0.00017979216],"about_ca_topic_score_codex":0.000017038074,"about_ca_topic_score_gemma":0.0000051249244,"teacher_disagreement_score":0.3685059,"about_ca_system_score_codex":0.000005294459,"about_ca_system_score_gemma":0.00020718171,"threshold_uncertainty_score":0.27750957},"labels":[],"label_agreement":null},{"id":"W4414081406","doi":"10.1172/jci184172","title":"Antithrombin-binding heparan sulfate is ubiquitously expressed in epithelial cells and suppresses pancreatic tumorigenesis","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Proteoglycans and glycosaminoglycans research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Bishop's University","funders":"National Institute of General Medical Sciences; National Heart, Lung, and Blood Institute; National Cancer Institute; National Institutes of Health; Novo Nordisk Fonden; Cancer Research Coordinating Committee; U.S. Department of Veterans Affairs","keywords":"Heparan sulfate; Carcinogenesis; Metastasis; Pancreatic cancer; Pancreatic Intraepithelial Neoplasia; Adenocarcinoma; Thrombin; Inflammation","score_opus":0.036723684294950015,"score_gpt":0.3616242026377325,"score_spread":0.32490051834278244,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414081406","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975901,0.00046363633,0.00039701114,0.0009034898,0.00032563956,0.00017467773,0.000024996252,0.0000029871962,0.00011744488],"genre_scores_gemma":[0.99555224,0.002349845,0.0011204743,0.00033752472,0.00026393952,0.0000064508754,0.000009981854,0.000011593367,0.00034795073],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979932,0.000300459,0.0010046085,0.00026012663,0.00022316168,0.0002184725],"domain_scores_gemma":[0.99892503,0.00017774863,0.0003476707,0.00020025813,0.00019499139,0.00015432546],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013787769,0.0001354184,0.00040396603,0.00017031704,0.00006298881,0.000060562303,0.00022177632,0.00020159282,0.000012131503],"category_scores_gemma":[0.0008468897,0.00011642479,0.00012485543,0.00020217134,0.00024486642,0.000022022317,0.00008597052,0.00027983164,0.000002293083],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003459464,0.00008136676,0.09083529,0.000080059806,0.00006911109,0.000020046473,0.00005835592,0.0000310887,0.90427095,0.00004616785,0.0016923485,0.0024692542],"study_design_scores_gemma":[0.0017134349,0.0004977843,0.048746694,0.00020015871,0.000042826225,0.000009631756,0.00006307567,0.00024123996,0.9427872,0.001857125,0.0037126727,0.0001281993],"about_ca_topic_score_codex":0.00007743102,"about_ca_topic_score_gemma":0.000039715724,"teacher_disagreement_score":0.042088598,"about_ca_system_score_codex":0.000015665215,"about_ca_system_score_gemma":0.00037887096,"threshold_uncertainty_score":0.4747665},"labels":[],"label_agreement":null},{"id":"W4414116050","doi":"10.1172/jci192052","title":"Molnupiravir clinical trial simulation suggests that polymerase chain reaction underestimates antiviral potency against SARS-CoV-2","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Potency; In vivo; Antiviral drug; In vitro; Clinical trial; Drug; Viral load; Virus","score_opus":0.23832213201962815,"score_gpt":0.5061695802385222,"score_spread":0.26784744821889406,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414116050","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98908293,0.0002542174,0.001839873,0.0043823593,0.002347649,0.0007121629,0.00000404409,0.00006525389,0.0013114993],"genre_scores_gemma":[0.9600405,0.00007095503,0.00083533686,0.036998454,0.001944256,0.00000735303,0.000014381046,0.00003216465,0.0000566105],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99342436,0.0011075961,0.0034990406,0.00047433554,0.0011115017,0.0003831729],"domain_scores_gemma":[0.99339575,0.0034157177,0.0017490187,0.00047115362,0.0008195498,0.00014880956],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0070520807,0.00029544017,0.0011643748,0.000569662,0.00015452385,0.00011132156,0.00027246293,0.0007430028,0.000002566564],"category_scores_gemma":[0.014938066,0.00024314802,0.0008022178,0.0006665106,0.0005437099,0.00063512166,0.00007872866,0.0018525836,0.000036799713],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.07312625,0.0028867538,0.5357514,0.00029851325,0.0008309755,0.00042522963,0.00017715698,0.00008992745,0.17996718,0.0007479506,0.004186014,0.20151262],"study_design_scores_gemma":[0.15817672,0.010281953,0.3750456,0.0028325862,0.0013673136,0.000083159706,0.00027880076,0.08481117,0.31811917,0.020059604,0.027995823,0.0009480959],"about_ca_topic_score_codex":0.00007364856,"about_ca_topic_score_gemma":0.000024675162,"teacher_disagreement_score":0.20056452,"about_ca_system_score_codex":0.00016860368,"about_ca_system_score_gemma":0.001881361,"threshold_uncertainty_score":0.9933595},"labels":[],"label_agreement":null},{"id":"W4414121550","doi":"10.1172/jci169395","title":"Targeting peroxiredoxin 2 prevents hepatocarcinogenesis in metabolic liver disease models","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Liver Disease Diagnosis and Treatment","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Cancer Institute; Japan Society for the Promotion of Science; Horizon 2020 Framework Programme; Institute of Genetics; National Institutes of Health; Institut Universitaire de France; Centre National de la Recherche Scientifique; Agence Nationale de Recherches sur le Sida et les Hépatites Virales; Fondation ARC pour la Recherche sur le Cancer; Agence Nationale de la Recherche; National Institute of Allergy and Infectious Diseases; Cancer Prevention and Research Institute of Texas; Universität Heidelberg; European Commission; Japan Agency for Medical Research and Development; Université de Strasbourg; Institut National de la Santé et de la Recherche Médicale; Deutsche Forschungsgemeinschaft; Universität Basel; Styrelsen för Internationellt Utvecklingssamarbete","keywords":"Hepatocellular carcinoma; Steatohepatitis; Liver cancer; Fatty liver; Transcriptome; Liver disease; AMPK; Cancer","score_opus":0.08694456766440774,"score_gpt":0.37601472462426483,"score_spread":0.2890701569598571,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414121550","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98958117,0.007493816,0.00020514682,0.0020413033,0.0002615026,0.00030536138,0.0000048609527,0.00000800964,0.000098848555],"genre_scores_gemma":[0.9937065,0.002718042,0.0016871477,0.0015214367,0.00022462555,0.000015912077,0.000012347056,0.000009302228,0.00010466031],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977968,0.0002777742,0.0012852352,0.00017646328,0.00032694216,0.00013682531],"domain_scores_gemma":[0.9984988,0.0002905096,0.0004261388,0.00015124981,0.0002183299,0.00041500345],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009782712,0.000118214135,0.0005210408,0.00019833818,0.000033280518,0.000017715522,0.00008491433,0.00008088439,0.000027261209],"category_scores_gemma":[0.0010896173,0.000090311405,0.0003399353,0.0002443666,0.00007442381,0.00026428796,0.000032620585,0.00021761231,0.000005691494],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037765352,0.00086637965,0.98968893,0.000085456,0.00020868532,0.00017039075,0.00007762997,0.00062176405,0.000089596535,0.00090574333,0.000958728,0.0059490567],"study_design_scores_gemma":[0.0026301746,0.0001283589,0.9732158,0.0006676717,0.0008339208,0.0000025370355,0.000026002124,0.014775417,0.0005491333,0.006887149,0.00021518397,0.000068617206],"about_ca_topic_score_codex":0.000036672944,"about_ca_topic_score_gemma":0.0000031929912,"teacher_disagreement_score":0.016473081,"about_ca_system_score_codex":0.000060079146,"about_ca_system_score_gemma":0.0006272904,"threshold_uncertainty_score":0.36827922},"labels":[],"label_agreement":null},{"id":"W4414195829","doi":"10.1172/jci186420","title":"MASH: the nexus of metabolism, inflammation, and fibrosis","year":2025,"lang":"en","type":"review","venue":"Journal of Clinical Investigation","topic":"Liver Disease Diagnosis and Treatment","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire de Sherbrooke; McMaster University Medical Centre","funders":"Canadian Institutes of Health Research; HLS Therapeutics; Diabetes Canada; Eli Lilly and Company","keywords":"Hepatocyte; Steatohepatitis; Fibrosis; Fatty liver; Adipose tissue; Hepatic stellate cell; Lipid metabolism; Lipotoxicity; Inflammation; Crosstalk","score_opus":0.11797412536241282,"score_gpt":0.43331478705016596,"score_spread":0.31534066168775315,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414195829","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.002075813,0.9955751,0.000007683555,0.0013269886,0.0003565197,0.0004604275,0.000018336834,0.0000037367756,0.0001754422],"genre_scores_gemma":[0.00031837952,0.9981528,0.00052529067,0.00015954227,0.0006864652,0.000014044319,0.000028736173,0.000010111542,0.00010465546],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9967547,0.0004050652,0.0023094325,0.00012957229,0.0003259424,0.000075301316],"domain_scores_gemma":[0.99472165,0.002093741,0.0023648706,0.00022193251,0.00040281046,0.0001949984],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011747218,0.00016965576,0.0018168811,0.00014383075,0.000035258916,0.000023186332,0.00010663903,0.00021039035,0.00002095982],"category_scores_gemma":[0.0024404551,0.000085546235,0.0008090519,0.00023051514,0.00020166338,0.00010016255,0.000039795043,0.00037918537,0.00000323722],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042631655,0.0001292252,0.0021753528,0.0111511415,0.001325509,0.000011987235,0.000069791735,0.0000011385853,4.7439636e-7,0.0011734439,0.0029632319,0.9809561],"study_design_scores_gemma":[0.0016241125,0.00041440004,0.027943466,0.046634767,0.02467751,0.00005174411,0.000033253513,0.000011052472,0.000031309937,0.002724851,0.8957203,0.00013321314],"about_ca_topic_score_codex":0.000005015133,"about_ca_topic_score_gemma":7.431968e-7,"teacher_disagreement_score":0.98082286,"about_ca_system_score_codex":0.000024927369,"about_ca_system_score_gemma":0.0010434474,"threshold_uncertainty_score":0.34884742},"labels":[],"label_agreement":null},{"id":"W4414239244","doi":"10.1172/jci178089","title":"A liver-infiltrating CD4+ Tfh1 cell response predicts HCV control, hepatitis, and seroconversion during acute infection","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Hepatitis C virus research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Emory University","keywords":"Hepatitis C virus; Virus; Seroconversion; Immune system; T cell; Immunity; Hepatitis B virus; Cell","score_opus":0.04385689594728317,"score_gpt":0.38354073303809316,"score_spread":0.33968383709081,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414239244","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99443686,0.00018272625,0.0008963186,0.0032023396,0.00037671145,0.00036558925,0.000006046067,0.00002828024,0.0005051154],"genre_scores_gemma":[0.99441344,0.0021988056,0.0015919462,0.00095740653,0.00034552018,0.0000052537666,0.000004572694,0.000013805416,0.00046924595],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9967473,0.0008925495,0.0014132047,0.00021395615,0.00052386144,0.00020911833],"domain_scores_gemma":[0.9967327,0.0013879623,0.000687376,0.00017134343,0.0006129721,0.00040761605],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0035222443,0.00013744575,0.0005373146,0.00035762592,0.00015010519,0.000061003437,0.000076012,0.00025977497,0.000035888672],"category_scores_gemma":[0.0067164777,0.0001212206,0.00017425795,0.0003250201,0.00022337725,0.00047369237,0.00005188257,0.00092860917,0.000012309383],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0033997209,0.00009896545,0.9490191,0.00024171115,0.00017091009,0.00020109267,0.00015743787,0.00002247799,0.038500294,0.000020839507,0.0013625667,0.0068048807],"study_design_scores_gemma":[0.0070362473,0.0015352198,0.9634048,0.0009602764,0.0003184191,0.00007132085,0.00002003431,0.0075371033,0.017153965,0.00023621683,0.0016305101,0.00009589241],"about_ca_topic_score_codex":0.00012274546,"about_ca_topic_score_gemma":0.00002767715,"teacher_disagreement_score":0.02134633,"about_ca_system_score_codex":0.00013684129,"about_ca_system_score_gemma":0.0007425277,"threshold_uncertainty_score":0.80407363},"labels":[],"label_agreement":null},{"id":"W4414313132","doi":"10.1172/jci182100","title":"PTBP1 variants displaying altered nucleocytoplasmic distribution are responsible for a neurodevelopmental disorder with skeletal dysplasia","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Connective tissue disorders research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; Institute of Genetics; Western University; University of Toronto; London Health Sciences Centre","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; Ministero della Salute; Agence Nationale de la Recherche; European Commission","keywords":"Missense mutation; RNA splicing; Ribonucleoprotein; RNA-binding protein; Cell nucleus; RNA; Transcriptome; Exon; Heterogeneous nuclear ribonucleoprotein; Germline","score_opus":0.0390677594364968,"score_gpt":0.3747278686516319,"score_spread":0.33566010921513506,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414313132","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.975439,0.00013796607,0.021841189,0.0018751362,0.00030125928,0.00030535806,0.000034334094,0.0000048312127,0.000060901308],"genre_scores_gemma":[0.99693966,0.00006694844,0.0021546788,0.0002472665,0.00017375193,0.00001621649,0.00012798673,0.000015136498,0.00025835898],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983731,0.00024121063,0.0007137483,0.00026298777,0.0002117006,0.00019727377],"domain_scores_gemma":[0.99853927,0.00025796058,0.00048365424,0.00016214333,0.00043935506,0.00011760308],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001027928,0.00013072236,0.00027795578,0.00007918003,0.00012914096,0.00004473448,0.00018389513,0.0001457818,0.0000062251183],"category_scores_gemma":[0.0031470442,0.00011002658,0.00013566269,0.00020651353,0.00017847997,0.000023749844,0.00006647889,0.00025358432,0.0000018748583],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008073503,0.0006394453,0.7271132,0.00023387864,0.00071899174,0.000035885616,0.000106116204,0.00057136203,0.22202316,0.0020685312,0.014072478,0.024343463],"study_design_scores_gemma":[0.0061469474,0.0019529375,0.93881494,0.00029568892,0.00010419544,0.00006824451,0.0002697074,0.0014516633,0.027355107,0.002112048,0.021158367,0.00027017517],"about_ca_topic_score_codex":0.000004168279,"about_ca_topic_score_gemma":0.00006413348,"teacher_disagreement_score":0.21170174,"about_ca_system_score_codex":0.000032238386,"about_ca_system_score_gemma":0.00066818245,"threshold_uncertainty_score":0.4486754},"labels":[],"label_agreement":null},{"id":"W4414462678","doi":"10.1172/jci180927","title":"USP10/GSK3β-mediated inhibition of PTEN drives resistance to PI3K inhibitors in breast cancer","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"PI3K/AKT/mTOR signaling in cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"PTEN; PI3K/AKT/mTOR pathway; Suppressor; Downregulation and upregulation; Phosphatase; Phosphorylation; Breast cancer; Mutant","score_opus":0.025899021860336227,"score_gpt":0.35755280271690343,"score_spread":0.3316537808565672,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414462678","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99249446,0.000647073,0.00038959167,0.0053660506,0.0007404368,0.00013114752,0.000029583709,0.0000040344935,0.00019762362],"genre_scores_gemma":[0.9961546,0.00035460372,0.0011428872,0.0015484643,0.00058089214,0.0000091960865,0.000016553511,0.00001211131,0.00018068358],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99768865,0.00022254966,0.001462591,0.00022390083,0.0002530209,0.00014925783],"domain_scores_gemma":[0.99823487,0.00014603585,0.00079812953,0.00017803728,0.0005001175,0.00014280035],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012172583,0.00012275454,0.00035791678,0.00017944035,0.000025018497,0.000014240501,0.00016095767,0.00024934995,0.000013273031],"category_scores_gemma":[0.0014109517,0.00011361856,0.00015210945,0.00040488192,0.0001891768,0.000019445306,0.000054049782,0.000279844,0.0000017688477],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00088120083,0.00011121518,0.22703396,0.00006882909,0.000083137566,0.000005380187,0.00008867929,0.00087408145,0.749534,0.00009532891,0.018670365,0.0025538318],"study_design_scores_gemma":[0.0024113837,0.00038195823,0.43768972,0.0019796672,0.00006999881,0.0000053466256,0.00008343446,0.00010900306,0.5452236,0.0022303797,0.009569976,0.00024552722],"about_ca_topic_score_codex":0.000030547482,"about_ca_topic_score_gemma":0.00019464416,"teacher_disagreement_score":0.21065576,"about_ca_system_score_codex":0.00006149994,"about_ca_system_score_gemma":0.00061369553,"threshold_uncertainty_score":0.46332303},"labels":[],"label_agreement":null},{"id":"W4414533051","doi":"10.1172/jci200201","title":"An open letter to the NIH: value and costs in publishing","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Health and Medical Research Impacts","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Journal of Communication (Canada)","funders":"","keywords":"Value (mathematics); Publishing; MEDLINE; Value of life","score_opus":0.3763234220812968,"score_gpt":0.5765139706756192,"score_spread":0.20019054859432234,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414533051","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.55585575,0.000054520588,0.00022146579,0.44250315,0.00022009976,0.00025780528,4.493019e-7,0.0000018190177,0.0008849389],"genre_scores_gemma":[0.7055215,0.00008694541,0.0017712162,0.29171848,0.0007686114,0.0000032745454,0.0000018619376,0.0000038102055,0.00012424779],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9976611,0.0006091877,0.0009337915,0.000109329834,0.000446556,0.0002400125],"domain_scores_gemma":[0.9926923,0.0023583544,0.0002842956,0.00024756943,0.00039076983,0.0040266924],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.018254451,0.000050832376,0.00029359953,0.00015257765,0.00004468141,0.00022594827,0.0002642456,0.00012783955,0.000012448837],"category_scores_gemma":[0.20529434,0.000028785073,0.000029517012,0.00034123808,0.00011148107,0.0007214827,0.00008056123,0.0011492262,0.0000034923544],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007041905,0.00017409319,0.18567556,0.00006515603,0.000025829857,0.00006407906,0.0003688573,0.00001325056,0.00063993625,0.0015232755,0.48517904,0.32556674],"study_design_scores_gemma":[0.0034510945,0.0016513162,0.7887748,0.0015417357,0.000028753353,0.00002274143,0.0001322109,0.0011708973,0.00023943614,0.0038534123,0.19908385,0.000049786715],"about_ca_topic_score_codex":0.00018533588,"about_ca_topic_score_gemma":0.00009025157,"teacher_disagreement_score":0.6030992,"about_ca_system_score_codex":0.00009263843,"about_ca_system_score_gemma":0.003401148,"threshold_uncertainty_score":0.8013998},"labels":[],"label_agreement":null},{"id":"W4414632805","doi":"10.1172/jci197100","title":"Clonal hematopoiesis driven by Dnmt3a mutations promotes metabolic disease development in mice","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Hemoglobinopathies and Related Disorders","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Cancer Institute; National Institutes of Health; Canadian Institutes of Health Research; Edward P. Evans Foundation","keywords":"Haematopoiesis; Mutation; Disease; Metabolic pathway; Metabolic disease; Metabolism","score_opus":0.031565004920227464,"score_gpt":0.350675772906966,"score_spread":0.31911076798673854,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414632805","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98148036,0.0016060113,0.0004964149,0.015620469,0.00028739372,0.00021361705,0.0000026228195,0.000011324496,0.00028178576],"genre_scores_gemma":[0.99063903,0.00031019366,0.0066029737,0.0018465106,0.00008066373,0.00000755259,0.00002874882,0.000008990058,0.00047536008],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99771434,0.00015187381,0.0015644127,0.0001398069,0.00029208045,0.00013746471],"domain_scores_gemma":[0.9985799,0.00030894502,0.00045268578,0.00008703963,0.0002572943,0.00031414465],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009145892,0.00010582307,0.00044381703,0.00020576672,0.00005822039,0.000018590612,0.000085171174,0.00014365723,0.000027861437],"category_scores_gemma":[0.0028324225,0.000081812526,0.00016503828,0.0003987777,0.00016533052,0.0001361184,0.000021729666,0.00048163606,0.000010094975],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006157317,0.0016069824,0.9476333,0.00036570395,0.0005854583,0.00013070328,0.0012413862,0.00028087987,0.0033477212,0.0025713807,0.011998186,0.02962254],"study_design_scores_gemma":[0.0056482204,0.00019910377,0.951126,0.0017726904,0.00061094516,0.000030847605,0.00047449197,0.002565951,0.0058384165,0.0084712785,0.023044974,0.00021708423],"about_ca_topic_score_codex":0.000006531469,"about_ca_topic_score_gemma":0.0000078588355,"teacher_disagreement_score":0.029405456,"about_ca_system_score_codex":0.00004389623,"about_ca_system_score_gemma":0.0012939106,"threshold_uncertainty_score":0.33908787},"labels":[],"label_agreement":null},{"id":"W4414644657","doi":"10.1172/jci188620","title":"Circadian rhythmicity and biopsychosocial characteristics influence opioid use in chronic low back pain","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Dietary Effects on Health","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université de Montréal; Queen's University; McMaster University; Kingston Health Sciences Centre; McGill University Health Centre; Centre Hospitalier de l’Université de Montréal","funders":"Strategy for Patient-Oriented Research; Canadian Institutes of Health Research","keywords":"Biopsychosocial model; Circadian rhythm; Chronic pain; Opioid; Low back pain; Population; Pain assessment","score_opus":0.05370515909705274,"score_gpt":0.38737860576033145,"score_spread":0.3336734466632787,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414644657","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99370277,0.0001521004,0.00021742626,0.0050557135,0.00051225757,0.00031081497,0.0000035660023,0.000007462525,0.000037917067],"genre_scores_gemma":[0.9891714,0.0006871622,0.0019378978,0.0074891644,0.00062501215,0.0000020982554,0.00000755286,0.000009268384,0.00007045436],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9972151,0.0005817859,0.0016253243,0.00017570167,0.00021880519,0.00018326884],"domain_scores_gemma":[0.99702805,0.0015323367,0.00070467015,0.00015208732,0.00024555819,0.00033729154],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.004174562,0.00011505012,0.0006088343,0.00021135723,0.000034085453,0.000038352046,0.00007185948,0.00022701004,0.000014482389],"category_scores_gemma":[0.010473436,0.000102797705,0.00010189633,0.00031873366,0.00027700508,0.00032927722,0.00001980004,0.00081617007,0.000009177617],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032007095,0.000100368314,0.96636367,0.0006156875,0.000040064562,0.00005742284,0.00009277258,0.000012746968,0.0018317739,0.00018363494,0.00084837637,0.029533384],"study_design_scores_gemma":[0.0020305351,0.00084104284,0.99010694,0.0022835308,0.000038446095,0.000019292374,0.000009268896,0.0021583997,0.00012082221,0.0011926622,0.0011255696,0.000073482195],"about_ca_topic_score_codex":0.00007034126,"about_ca_topic_score_gemma":0.00006864442,"teacher_disagreement_score":0.029459901,"about_ca_system_score_codex":0.00020626072,"about_ca_system_score_gemma":0.0014027699,"threshold_uncertainty_score":0.99786174},"labels":[],"label_agreement":null},{"id":"W4414681896","doi":"10.1172/jci195267","title":"Altered immune and metabolic molecular pathways drive islet cell dysfunction in human type 1 diabetes","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; University of Alberta","funders":"Canadian Institutes of Health Research; National Human Genome Research Institute; University of California, San Diego; Vetenskapsrådet; National Institutes of Health; National Institute of Diabetes and Digestive and Kidney Diseases; Alberta Innovates; Knut och Alice Wallenbergs Stiftelse; Human Islet Research Network","keywords":"Islet; Immune system; Transcriptome; Downregulation and upregulation; mTORC1; Phenotype; Cell type; Lysosome; Major histocompatibility complex; Cell","score_opus":0.04156627617723751,"score_gpt":0.3318410158633541,"score_spread":0.2902747396861166,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414681896","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939507,0.0024786005,0.0001121941,0.0012342884,0.0006831579,0.00013129752,7.95309e-7,0.000011173925,0.0013977792],"genre_scores_gemma":[0.9961603,0.0002989923,0.0010506745,0.002057226,0.00021678464,0.0000024372143,0.000011956657,0.000008000265,0.00019359661],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99817777,0.0002146349,0.0011620421,0.0001384024,0.00018555849,0.00012157179],"domain_scores_gemma":[0.99866855,0.0003184115,0.00047224227,0.00013693834,0.00025678656,0.00014708294],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012443581,0.000103616454,0.00056920265,0.0002530318,0.00003567212,0.000021084365,0.000047757465,0.00014226382,0.000035593395],"category_scores_gemma":[0.0019712425,0.00008399248,0.00012576648,0.0003146186,0.00013177226,0.00013139767,0.000021442134,0.00040409944,0.000005039541],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015800387,0.00020170982,0.36598563,0.00011442064,0.00013075401,0.000011521177,0.00009165046,0.000031599855,0.62674224,0.0016660426,0.0012661109,0.0036003029],"study_design_scores_gemma":[0.0052666557,0.00095813506,0.7332038,0.00054349646,0.00039811234,0.0000043586742,0.000103032646,0.0010102843,0.24577695,0.01091589,0.00171283,0.0001064491],"about_ca_topic_score_codex":0.0000061444366,"about_ca_topic_score_gemma":6.3655114e-7,"teacher_disagreement_score":0.38096532,"about_ca_system_score_codex":0.000022826978,"about_ca_system_score_gemma":0.00017977775,"threshold_uncertainty_score":0.34251142},"labels":[],"label_agreement":null},{"id":"W4414896765","doi":"10.1172/jci197583","title":"The cell-type–specific genetic architecture of chronic pain in brain and dorsal root ganglia","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Axon Guidance and Neuronal Signaling","field":"Neuroscience","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Neurological Disorders and Stroke; National Institute on Drug Abuse; National Institute of Arthritis and Musculoskeletal and Skin Diseases; VISN 4 Mental Illness Research, Education, and Clinical Center; NIH Clinical Center; National Institutes of Health; National Institute on Alcohol Abuse and Alcoholism; Eli Lilly and Company; U.S. Department of Veterans Affairs","keywords":"Glutamatergic; Chronic pain; Genome-wide association study; Context (archaeology); GABAergic; Axon; Dorsal root ganglion; Spinal cord","score_opus":0.05247333241603073,"score_gpt":0.34214829587093687,"score_spread":0.2896749634549061,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414896765","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99153787,0.0017197073,0.0009842804,0.005112487,0.0004325403,0.00010454101,5.6847307e-7,0.000004077919,0.00010394925],"genre_scores_gemma":[0.9975074,0.0005003729,0.00023647174,0.0014692356,0.00019368777,9.5011626e-7,1.4305857e-7,0.000006498937,0.00008527498],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973447,0.00092716963,0.0011627742,0.00016560088,0.0002571169,0.00014264761],"domain_scores_gemma":[0.99449867,0.0046215155,0.0006126914,0.00012717562,0.000070856404,0.00006910657],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026602114,0.00008718004,0.0002453633,0.00009784387,0.00007649189,0.000031987347,0.00023146834,0.00008612288,0.0000060703533],"category_scores_gemma":[0.004974053,0.000058853017,0.00008712922,0.00036249953,0.0003683029,0.00007419863,0.000040064162,0.0005505979,0.0000013489989],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00049325364,0.00016147838,0.048528466,0.00011012552,0.000013159532,0.000067122666,0.0002549432,0.0043805405,0.7741865,0.0020430842,0.0047295075,0.16503182],"study_design_scores_gemma":[0.0034636268,0.0031677177,0.29254618,0.0009934588,0.00004656696,0.0000372731,0.0000929031,0.008350044,0.54195756,0.11921424,0.029824562,0.00030585847],"about_ca_topic_score_codex":0.0000029304795,"about_ca_topic_score_gemma":0.000014739142,"teacher_disagreement_score":0.24401774,"about_ca_system_score_codex":0.000023252,"about_ca_system_score_gemma":0.00025929319,"threshold_uncertainty_score":0.5954765},"labels":[],"label_agreement":null},{"id":"W4414896868","doi":"10.1172/jci186287","title":"CDKL1 variants affecting ciliary formation predispose to thoracic aortic aneurysm and dissection","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Genetics and Neurodevelopmental Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"IONICS Mass Spectrometry (Canada)","funders":"Deutsche Forschungsgemeinschaft; Universitätsklinikum Hamburg-Eppendorf; Universität Hamburg; Deutsches Zentrum für Herz-Kreislaufforschung","keywords":"Cilium; Zebrafish; Gene knockdown; Aortic dissection; Gene; Pathogenesis; Protein kinase domain; Gene knockout; Exome sequencing","score_opus":0.029661927568382634,"score_gpt":0.36072825387499285,"score_spread":0.3310663263066102,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414896868","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994162,0.00010515932,0.0041994117,0.0007531188,0.0004906759,0.00013383121,0.0000012556405,0.0000035856797,0.00015096854],"genre_scores_gemma":[0.9971526,0.00019484942,0.0016480217,0.000818031,0.00007366741,0.0000023121797,0.0000096292515,0.0000061947217,0.00009468654],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99889004,0.00013306101,0.0006295751,0.00014469106,0.00011108549,0.00009153217],"domain_scores_gemma":[0.99935746,0.000051253868,0.0002673957,0.00008867313,0.00012218674,0.0001130356],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000739445,0.00008019118,0.00013964668,0.00007809008,0.00006490984,0.0000321164,0.000071682545,0.00010084591,0.0000016432476],"category_scores_gemma":[0.0011174247,0.00007286836,0.000059768667,0.00013173581,0.000041390285,0.00001777793,0.00005310736,0.00013014137,0.000001315221],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003277486,0.00009620475,0.14287312,0.00010112971,0.000056671823,0.000005304713,0.00016845988,0.00027299163,0.80307174,0.0000373424,0.0020254795,0.050963808],"study_design_scores_gemma":[0.00040664183,0.0005031834,0.9374006,0.00009427914,0.000038648413,0.000039093353,0.000086555614,0.00058500055,0.059241876,0.0011111085,0.0004038927,0.00008912555],"about_ca_topic_score_codex":0.0000014753042,"about_ca_topic_score_gemma":0.000009376141,"teacher_disagreement_score":0.7945275,"about_ca_system_score_codex":0.000007917747,"about_ca_system_score_gemma":0.00008464314,"threshold_uncertainty_score":0.29714856},"labels":[],"label_agreement":null},{"id":"W4415166562","doi":"10.1172/jci184474","title":"Biallelic variants in ARHGAP19 cause a progressive inherited motor-predominant neuropathy","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Neurological diseases and metabolism","field":"Neuroscience","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"CIHR Skin Research Training Centre; Medical Research Council; National Institutes of Health; Fundação de Amparo à Pesquisa do Estado de São Paulo; Università degli Studi dell'Aquila; Deutsche Forschungsgemeinschaft; Medical Research Future Fund; Natural Sciences and Engineering Research Council of Canada; Muscular Dystrophy Association; NIHR Cambridge Biomedical Research Centre; European Commission; University College London; Wellcome Trust; National Institute of Neurological Disorders and Stroke; National Institute for Health and Care Research","keywords":"Phenotype; Transcriptome; Gene; Drosophila melanogaster; In silico; Mutation; RHOA; Disease; Genetic heterogeneity; HEK 293 cells","score_opus":0.12367123634047684,"score_gpt":0.40510950172284893,"score_spread":0.2814382653823721,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415166562","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946169,0.00022131453,0.00008891802,0.0031654234,0.001407106,0.00028588215,0.000006130571,0.000019038873,0.00018924628],"genre_scores_gemma":[0.98935723,0.00048092505,0.00030186746,0.00942968,0.00030002184,0.000008840426,6.1404455e-7,0.000010269897,0.0001105624],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9961786,0.0012267968,0.0016813894,0.0003252015,0.00035566607,0.00023233738],"domain_scores_gemma":[0.9972375,0.0011827643,0.00093220273,0.00021257601,0.00015583487,0.00027910806],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0010852234,0.00014663908,0.00052552467,0.0002449329,0.000057910296,0.00006827053,0.00035085206,0.00015058927,0.000043003318],"category_scores_gemma":[0.023718584,0.00010822245,0.00023121662,0.00065361214,0.00030069923,0.0002854699,0.00009366855,0.00069256715,0.000019292082],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005141179,0.0040425602,0.1535161,0.0001750685,0.000071071925,0.006685847,0.00034646018,0.00043888125,0.73904246,0.026231408,0.003653518,0.06065544],"study_design_scores_gemma":[0.004235387,0.00084824866,0.9489839,0.00030161356,0.00009670186,0.00006643813,0.00001566289,0.0029309308,0.008396568,0.03101248,0.002933005,0.00017904381],"about_ca_topic_score_codex":0.000004697525,"about_ca_topic_score_gemma":0.0000016199197,"teacher_disagreement_score":0.79546785,"about_ca_system_score_codex":0.000016447384,"about_ca_system_score_gemma":0.0003230482,"threshold_uncertainty_score":0.98450506},"labels":[],"label_agreement":null},{"id":"W4415855223","doi":"10.1172/jci194751","title":"Antiinflammatory actions of glucagon-like peptide-1–based therapies beyond metabolic benefits","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Diabetes Treatment and Management","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Sinai Health System; Lunenfeld-Tanenbaum Research Institute","funders":"Banting and Best Diabetes Centre, University of Toronto; Canadian Institutes of Health Research; Novo Nordisk; Amgen; Pfizer; Diabetes Canada; Eli Lilly and Company","keywords":"Inflammation; Clinical trial; Disease; Diabetes mellitus; Kidney disease; Type 2 diabetes; Kidney","score_opus":0.07156355982170079,"score_gpt":0.37243666879161813,"score_spread":0.30087310896991737,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415855223","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9894447,0.0016173706,0.00021659808,0.0051024333,0.00084703974,0.00020415042,0.0000023963973,0.00001583283,0.0025494886],"genre_scores_gemma":[0.9902226,0.0006927215,0.0054243617,0.0021819961,0.00023961026,0.0000050818294,0.000010638684,0.000010458914,0.0012125601],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99811757,0.00010827594,0.0012504559,0.000114319264,0.0002975989,0.000111780944],"domain_scores_gemma":[0.9981009,0.00037230755,0.00082435086,0.00019649228,0.00037332828,0.00013262402],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010404733,0.00011110377,0.0005720495,0.0002934512,0.00004277276,0.000015734637,0.00009135664,0.00009882918,0.00003812032],"category_scores_gemma":[0.0005166968,0.00008333359,0.00034938418,0.0002794451,0.00017982119,0.00018420973,0.000020111507,0.00022158577,0.00000606821],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00070697075,0.001492294,0.78534746,0.0004118462,0.0034394213,0.000023636281,0.0002727711,0.0005201186,0.007630296,0.033238314,0.020723531,0.14619333],"study_design_scores_gemma":[0.004626372,0.00070667337,0.91685534,0.0006767155,0.0017147982,0.0000024118272,0.00013661692,0.00045771265,0.019069895,0.0041932403,0.051459778,0.00010046904],"about_ca_topic_score_codex":0.0000044763415,"about_ca_topic_score_gemma":0.0000048452644,"teacher_disagreement_score":0.14609286,"about_ca_system_score_codex":0.000021961352,"about_ca_system_score_gemma":0.00034029724,"threshold_uncertainty_score":0.3398245},"labels":[],"label_agreement":null},{"id":"W4416322306","doi":"10.1172/jci171634","title":"Clonal hematopoiesis activates procalcific pathways in macrophages and promotes aortic valve stenosis","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Acute Myeloid Leukemia Research","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Dr. Rolf M. Schwiete Stiftung; Deutsche Forschungsgemeinschaft; NIH Office of the Director; Deutsches Zentrum für Herz-Kreislaufforschung; Burroughs Wellcome Fund","keywords":"Oncostatin M; Proinflammatory cytokine; Bone marrow; Pathogenesis; Paracrine signalling; Haematopoiesis; Aortic valve; Mesenchymal stem cell","score_opus":0.07587172196992743,"score_gpt":0.3965108049611365,"score_spread":0.3206390829912091,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416322306","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98959893,0.0004750495,0.00012923029,0.0091192145,0.00013381781,0.00032704257,0.0000017195154,0.000013684346,0.00020128282],"genre_scores_gemma":[0.9934258,0.00036377908,0.005067612,0.0007687932,0.00019317775,0.000009810421,0.0000033423012,0.0000128746005,0.00015483645],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9973765,0.00028191548,0.0014963681,0.00021770355,0.00041736363,0.0002101274],"domain_scores_gemma":[0.9973344,0.0013634383,0.0004976422,0.00015630353,0.0003886084,0.00025960588],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002382888,0.00013448713,0.00065020367,0.0003487483,0.000051887277,0.000045266188,0.00012051378,0.00021598648,0.000022244838],"category_scores_gemma":[0.0069504,0.000099278404,0.00020208574,0.00048781125,0.00037399915,0.00023908768,0.00006936805,0.000918745,0.0000049679684],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007136675,0.00039865673,0.9323777,0.0006049628,0.00031062888,0.000103538216,0.0004540466,0.000006797163,0.031985004,0.00074645004,0.0017373532,0.030561173],"study_design_scores_gemma":[0.003033416,0.0007560884,0.933085,0.0012593406,0.00016017436,0.00006907833,0.00034409921,0.0011733802,0.044810265,0.015058666,0.00014832953,0.0001021472],"about_ca_topic_score_codex":0.000012319962,"about_ca_topic_score_gemma":0.0000023365858,"teacher_disagreement_score":0.030459026,"about_ca_system_score_codex":0.00014014899,"about_ca_system_score_gemma":0.0009987687,"threshold_uncertainty_score":0.832078},"labels":[],"label_agreement":null},{"id":"W4416322354","doi":"10.1172/jci195840","title":"EZH2 crosstalk with RNA methylation promotes prostate cancer progression through modulation of m6A autoregulation pathway","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia","funders":"Robert H. Lurie Comprehensive Cancer Center; National Cancer Institute; National Institutes of Health; Northwestern University; Elsa U. Pardee Foundation; American Association for Cancer Research; U.S. Department of Defense","keywords":"EZH2; Autoregulation; Prostate cancer; Methyltransferase; Translation (biology); microRNA; Gene knockdown; Transcription (linguistics); RNA; FOXA1","score_opus":0.043770044897244294,"score_gpt":0.39647151950525306,"score_spread":0.35270147460800877,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416322354","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98159766,0.00073006144,0.015824359,0.0010539144,0.00027752056,0.00030768916,0.000008565757,0.0000062726854,0.0001939782],"genre_scores_gemma":[0.99041134,0.00021874253,0.0086079715,0.000101077734,0.00025673473,0.000021499041,0.000055485594,0.000011947387,0.0003152085],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981598,0.00017905282,0.0010770158,0.00020484265,0.0002753475,0.00010393085],"domain_scores_gemma":[0.99737024,0.00004620221,0.0014415726,0.0002037517,0.0008809046,0.000057299636],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008924233,0.00011664171,0.00025775077,0.000068433896,0.000076576376,0.000031022242,0.00010803514,0.00018472693,0.0000069831462],"category_scores_gemma":[0.00037140492,0.000085469306,0.00011530561,0.00024920487,0.00021509184,0.000058076846,0.000022849395,0.00015222731,3.2139354e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007801591,0.0001905758,0.114252694,0.000112682654,0.0001768295,7.8270125e-7,0.00026347637,0.008818585,0.7545443,0.001256835,0.00050572405,0.11909735],"study_design_scores_gemma":[0.0016513637,0.0009505601,0.37544763,0.00049412134,0.000093763665,0.0000030770245,0.00005687683,0.0044148746,0.6065378,0.006344294,0.0038536296,0.00015199567],"about_ca_topic_score_codex":0.000016767988,"about_ca_topic_score_gemma":0.000015186355,"teacher_disagreement_score":0.2611949,"about_ca_system_score_codex":0.000029622692,"about_ca_system_score_gemma":0.00059884525,"threshold_uncertainty_score":0.34853372},"labels":[],"label_agreement":null},{"id":"W4416573201","doi":"10.1172/jci184514","title":"P selectin promotes SARS-CoV-2 interactions with platelets and the endothelium","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"COVID-19 Clinical Research Studies","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Health and Medical Research Council; Medical Research Council; Canadian Institutes of Health Research","keywords":"Platelet; P-selectin; Platelet activation; Innate immune system; Receptor; Selectin; Gene; Endothelium; L-selectin","score_opus":0.11311513616429007,"score_gpt":0.49042964422658214,"score_spread":0.37731450806229205,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416573201","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.87857366,0.00013949175,0.0010700463,0.118877046,0.00024004867,0.00036850525,9.750777e-7,0.0000145039485,0.00071575335],"genre_scores_gemma":[0.98868674,0.00041480942,0.0018210392,0.008048065,0.00035316247,0.00000888882,7.341561e-7,0.000007938748,0.00065863424],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977541,0.00039638297,0.001184249,0.00015805509,0.00036597202,0.00014122127],"domain_scores_gemma":[0.9775143,0.020730795,0.00065935095,0.0001914722,0.0007720946,0.00013196796],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.003701786,0.000103027865,0.0005753054,0.0001304087,0.00011628516,0.0000415828,0.00010399632,0.000073957824,0.0000067855094],"category_scores_gemma":[0.088770084,0.00005088971,0.00016431556,0.0003229381,0.0009974341,0.00014454893,0.0000630811,0.0010967683,0.000004274032],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.032936044,0.0017097713,0.7379282,0.0016521089,0.005523358,0.00032415596,0.0023146607,0.000085200234,0.04458546,0.014829259,0.03545147,0.122660324],"study_design_scores_gemma":[0.052310225,0.007798853,0.63811505,0.0067491373,0.0023393787,0.00030528844,0.00045049324,0.0122622615,0.084203005,0.08498757,0.11002485,0.0004538672],"about_ca_topic_score_codex":0.000030847634,"about_ca_topic_score_gemma":0.000031487198,"teacher_disagreement_score":0.12220646,"about_ca_system_score_codex":0.000042238666,"about_ca_system_score_gemma":0.00072003755,"threshold_uncertainty_score":0.9189056},"labels":[],"label_agreement":null},{"id":"W4416645852","doi":"10.1172/jci189830","title":"Functional consequence of pathogenic GABRA3 variants determines whether X-linked inheritance is dominant or recessive","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Genomics and Rare Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto; Newborn Screening Ontario; Children's Hospital of Eastern Ontario","funders":"National Health and Medical Research Council; Lundbeckfonden; National Institutes of Health; H. Lundbeck A/S; Medical Research Council; Stiftung Michael","keywords":"Epilepsy; Inheritance (genetic algorithm); Epilepsy syndromes; CLARITY; Multifactorial Inheritance; Generalized epilepsy; Gene; Intellectual disability; Penetrance","score_opus":0.05954585628538313,"score_gpt":0.35674250318806205,"score_spread":0.29719664690267894,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416645852","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99599737,0.0008485541,0.0013815955,0.0009437606,0.0006487995,0.00008093004,0.000022817925,0.0000013171731,0.00007487766],"genre_scores_gemma":[0.99458086,0.00078482553,0.0023119485,0.0014375148,0.00028637983,0.0000029575558,0.00001152232,0.0000073521364,0.00057660695],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984557,0.00015079712,0.001001087,0.00016743666,0.00013217833,0.00009279384],"domain_scores_gemma":[0.99831176,0.00014144051,0.0008586597,0.00016463886,0.00042535618,0.000098147386],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006087629,0.00009600701,0.00027462508,0.000046972786,0.00003827299,0.000013642189,0.00015143024,0.00016884266,0.000039089686],"category_scores_gemma":[0.001757048,0.000069478505,0.00019824639,0.000103988656,0.00024329092,0.000010791239,0.000039934137,0.00012325757,0.0000017141423],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014238104,0.00015446833,0.024090452,0.00006642746,0.00020638733,0.000059529837,0.000042568492,0.0000617622,0.96335644,0.000122252,0.005433325,0.0049826093],"study_design_scores_gemma":[0.0057778703,0.0019980937,0.57376605,0.0009371406,0.00043641025,0.00043947442,0.0002735734,0.00049845286,0.38470274,0.019376565,0.011329797,0.00046382443],"about_ca_topic_score_codex":0.0000032639462,"about_ca_topic_score_gemma":0.00000823594,"teacher_disagreement_score":0.5786537,"about_ca_system_score_codex":0.000008460435,"about_ca_system_score_gemma":0.0008078017,"threshold_uncertainty_score":0.28332514},"labels":[],"label_agreement":null},{"id":"W4416665762","doi":"10.1172/jci181943","title":"Loss of FBXO11 establishes a stem cell program in acute myeloid leukemia by dysregulating LONP1","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Acute Myeloid Leukemia Research","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Spinal Cord Injury BC","funders":"Terry Fox Research Institute; Canadian Institutes of Health Research; Killam Trusts","keywords":"Ubiquitin ligase; Myeloid leukemia; Stem cell; Haematopoiesis; Progenitor cell; Myeloid; Mitochondrion; Hematopoietic stem cell","score_opus":0.04826515329223378,"score_gpt":0.38827299562937206,"score_spread":0.34000784233713827,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416665762","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99384755,0.000376666,0.00036889297,0.0033592181,0.00027066268,0.000537429,0.000005604192,0.000023566632,0.0012104003],"genre_scores_gemma":[0.9847839,0.0003246413,0.012298584,0.0006561169,0.0002354911,0.000012033608,0.000017944638,0.000024724919,0.0016465776],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99523205,0.0004272723,0.002988177,0.0002722939,0.0007501712,0.0003300571],"domain_scores_gemma":[0.9959485,0.0012123936,0.001417372,0.0003191978,0.00075377047,0.00034878406],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0037580098,0.00019041219,0.0010273658,0.0004299028,0.00004114128,0.000045129425,0.00031112187,0.00037854663,0.000020479443],"category_scores_gemma":[0.0017010712,0.00015492424,0.0003039188,0.0010467926,0.0005066483,0.0004024069,0.000103977465,0.0014929022,0.000005096287],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016061569,0.0007209529,0.79226553,0.0007737851,0.00037854124,0.00024502192,0.00042995464,0.00019997086,0.028541964,0.00023285275,0.02825862,0.14634663],"study_design_scores_gemma":[0.025484527,0.006277466,0.7524125,0.0056844177,0.0010911354,0.00020351728,0.0012606295,0.022867393,0.16604212,0.004736624,0.013358136,0.0005815503],"about_ca_topic_score_codex":0.000060784394,"about_ca_topic_score_gemma":0.000010744031,"teacher_disagreement_score":0.14576508,"about_ca_system_score_codex":0.00051585893,"about_ca_system_score_gemma":0.0027999745,"threshold_uncertainty_score":0.6486},"labels":[],"label_agreement":null},{"id":"W4416920916","doi":"10.1172/jci195987","title":"Immobilized IgG-containing immune complexes require platelets to recruit neutrophils during inflammation","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Platelet Disorders and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier de l'Université Laval; Université Laval; Arthritis Research Centre of Canada; Centre hospitalier universitaire de Québec","funders":"Canadian Institutes of Health Research","keywords":"Platelet; Inflammation; Immune system; Neutrophil extracellular traps; Platelet activation; Context (archaeology); Receptor; Antigen-Antibody Complex; Rheumatoid arthritis","score_opus":0.0711297597143566,"score_gpt":0.39221598617491454,"score_spread":0.32108622646055796,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416920916","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9897168,0.0002593125,0.00019201399,0.008329663,0.000488028,0.00042026752,0.0000018523317,0.00002693853,0.0005651072],"genre_scores_gemma":[0.9956056,0.00013548152,0.00284033,0.0007357867,0.00029722418,0.00000852861,0.000015863636,0.000013743847,0.0003474337],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9971341,0.0001599608,0.0020234557,0.00019065023,0.00029831694,0.0001935146],"domain_scores_gemma":[0.9979687,0.00036381322,0.00083423173,0.00020784681,0.0003696808,0.0002557369],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011134315,0.00015406703,0.0008317287,0.0002828563,0.000109495064,0.000048802533,0.000111128174,0.00016587434,0.000032431697],"category_scores_gemma":[0.002152188,0.00012554417,0.00027184704,0.00034102015,0.0000872995,0.00037863376,0.000041287985,0.0004186386,0.00002041031],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.015353282,0.00094560394,0.30761316,0.00068553566,0.002168089,0.0020150116,0.0015629879,0.001098341,0.5516268,0.0041727265,0.0013279088,0.11143058],"study_design_scores_gemma":[0.015381056,0.0022197021,0.9126985,0.0024406845,0.00042998441,0.00032196622,0.00025385252,0.00042141372,0.05045246,0.011842663,0.0033031616,0.00023457954],"about_ca_topic_score_codex":0.000018558554,"about_ca_topic_score_gemma":0.000006268584,"teacher_disagreement_score":0.6050853,"about_ca_system_score_codex":0.00010320816,"about_ca_system_score_gemma":0.00028037882,"threshold_uncertainty_score":0.5119543},"labels":[],"label_agreement":null},{"id":"W4417000373","doi":"10.1172/jci196495","title":"Noncanonical functions of UGT2B17 promote castration-resistant prostate cancer progression","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Université Laval; Centre hospitalier universitaire de Québec; Centre hospitalier de l'Université Laval; Vancouver General Hospital","funders":"Canadian Institutes of Health Research","keywords":"Prostate cancer; Tumor progression; Prostate; Cell growth; Androgen; Downregulation and upregulation; Transcription (linguistics); Androgen deprivation therapy","score_opus":0.10355666009587816,"score_gpt":0.4807232916004244,"score_spread":0.3771666315045462,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417000373","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98508555,0.0013412235,0.00009481226,0.011545314,0.0005905774,0.00052247953,0.0000133686635,0.000010852034,0.0007958314],"genre_scores_gemma":[0.99352884,0.0006815807,0.0023452784,0.00021242774,0.00033535162,0.000023720675,0.000018756215,0.000009862644,0.0028441965],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99757475,0.00015835348,0.0014677861,0.00015731447,0.00048611828,0.00015566418],"domain_scores_gemma":[0.997603,0.00022864371,0.0007757176,0.00015856592,0.001004838,0.00022924517],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012683925,0.00010437731,0.00047888723,0.0001735524,0.00007254337,0.000020464047,0.00008080578,0.00014198828,0.000053192907],"category_scores_gemma":[0.0009529883,0.000068245055,0.00022316627,0.00040092983,0.00035235967,0.00016961803,0.000025328218,0.00049573666,0.0000030035412],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008974097,0.0013858005,0.6997412,0.0008349136,0.0009241992,0.000116490795,0.00041314441,0.00010292301,0.12983339,0.00063162495,0.014243847,0.1427984],"study_design_scores_gemma":[0.012589236,0.0060338154,0.87520885,0.0057111853,0.001015879,0.000041261643,0.00023185408,0.00092793535,0.07657038,0.0035946532,0.01788138,0.00019356165],"about_ca_topic_score_codex":0.000024635967,"about_ca_topic_score_gemma":0.000020237709,"teacher_disagreement_score":0.17546767,"about_ca_system_score_codex":0.00010855365,"about_ca_system_score_gemma":0.0030526249,"threshold_uncertainty_score":0.54152256},"labels":[],"label_agreement":null},{"id":"W4417230978","doi":"10.1172/jci188458","title":"CD8+ T cells in the tumor microenvironment modulate the response to endocrine therapy in breast cancer","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Cancer Immunotherapy and Biomarkers","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire de Sherbrooke; Université de Sherbrooke","funders":"National Cancer Institute; National Institutes of Health; Seagen; Puma Biotechnology; Susan G. Komen; Cancer Prevention and Research Institute of Texas; Daiichi Sankyo Europe; U.S. Department of Defense; Breast Cancer Research Foundation; Sanofi; AstraZeneca; Eli Lilly and Company; Bristol-Myers Squibb; NightstaRx; University of Texas Southwestern Medical Center; Susan G. Komen for the Cure; Pfizer; Amgen","keywords":"Tumor microenvironment; Stromal cell; CXCL11; Letrozole; Immune system; CXCL10; CXCR3; Chemokine; Cytotoxic T cell","score_opus":0.044219122027332795,"score_gpt":0.37366916011851287,"score_spread":0.32945003809118006,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417230978","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8473263,0.00053756713,0.000011956977,0.15142448,0.00033374896,0.00033082932,0.0000038286994,0.0000018688492,0.00002941783],"genre_scores_gemma":[0.9670017,0.001964895,0.00015327043,0.030496472,0.00018895626,0.000015956673,5.7293715e-7,0.000006309363,0.00017187215],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9977302,0.0006760295,0.0010781982,0.00012006757,0.00025927002,0.00013621394],"domain_scores_gemma":[0.9985316,0.00083684514,0.00030885972,0.00021039962,0.00004999731,0.000062291416],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0039798403,0.00009390854,0.00028565474,0.00013845785,0.000037466223,0.00002124211,0.00019281765,0.000043353593,0.000056475736],"category_scores_gemma":[0.00023999682,0.000047215966,0.00015151304,0.00038991586,0.00015903969,0.000060399576,0.000017238795,0.00044870403,0.000002973912],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.05348589,0.00061453425,0.33184525,0.000033966055,0.00019931182,0.00014516046,0.0016755858,0.00079998147,0.5428048,0.000031402924,0.010664076,0.05770007],"study_design_scores_gemma":[0.0040394105,0.00046217942,0.96942335,0.0004445738,0.000025557247,0.00005463824,0.00020010445,0.0001077776,0.009110578,0.00027358995,0.0158086,0.00004963717],"about_ca_topic_score_codex":0.00017185361,"about_ca_topic_score_gemma":0.000102621525,"teacher_disagreement_score":0.6375781,"about_ca_system_score_codex":0.00013429935,"about_ca_system_score_gemma":0.00031963593,"threshold_uncertainty_score":0.19494207},"labels":[],"label_agreement":null}]}