{"meta":{"query_hash":"5ff101173afe","filters":{"venue":"Journal of Clinical Virology"},"cohort_total":191,"direct_labels_cover":0,"predictions_cover":191,"exported":191,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/5ff101173afe","api":"https://metacan.xera.ac/api/v1/cohort?venue=Journal+of+Clinical+Virology"},"results":[{"id":"W1897991181","doi":"10.1016/j.jcv.2015.11.002","title":"Influenza virus emitted by naturally-infected hosts in a healthcare setting","year":2015,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Infection Control and Ventilation","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of British Columbia; Public Health Ontario; Sunnybrook Hospital; Public Health Agency of Canada; Sunnybrook Health Science Centre","funders":"Workplace Safety and Insurance Board","keywords":"Virus; Airborne transmission; Transmission (telecommunications); Virology; Medicine; Influenza A virus; Orthomyxoviridae; Respiratory system; Coronavirus disease 2019 (COVID-19); Internal medicine; Infectious disease (medical specialty); Disease","score_opus":0.0684280586769942,"score_gpt":0.44245332803233234,"score_spread":0.37402526935533814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1897991181","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98643833,0.0006387217,0.00032964113,0.011182259,0.0010691435,0.00013971179,0.000002406425,0.000017528688,0.00018227827],"genre_scores_gemma":[0.9862868,0.000063204374,0.00020823862,0.012638896,0.0007361706,0.0000016567024,0.0000057189804,0.0000109666225,0.000048334994],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9972386,0.00050224276,0.0016575719,0.0001366635,0.00024525673,0.00021968978],"domain_scores_gemma":[0.9976306,0.00054499734,0.0008728714,0.00011163796,0.0005351117,0.0003047809],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002572103,0.000104384686,0.00068197714,0.00018069336,0.000023714761,0.000007973813,0.000066702116,0.0003943356,0.000033555767],"category_scores_gemma":[0.0050613587,0.00007995677,0.00020559737,0.00018624676,0.00006012252,0.00012345088,0.000023727243,0.0012575269,0.000024696745],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0035224843,0.0003438542,0.97517216,0.000016632082,0.00007978383,0.00013201479,0.00007440502,0.000025673513,0.0016457102,0.000039707444,0.0058858525,0.013061727],"study_design_scores_gemma":[0.010757123,0.0028580532,0.95749223,0.00006673485,0.00006726045,0.00037008134,0.000018107643,0.0011023848,0.00010543619,0.00038122793,0.026699426,0.0000819506],"about_ca_topic_score_codex":0.00006640432,"about_ca_topic_score_gemma":0.00005742362,"teacher_disagreement_score":0.020813571,"about_ca_system_score_codex":0.00007184371,"about_ca_system_score_gemma":0.00032654224,"threshold_uncertainty_score":0.6059285},"labels":[],"label_agreement":null},{"id":"W1926731915","doi":"10.1016/j.jcv.2015.08.005","title":"Sensitivity of a rapid point of care assay for early HIV antibody detection is enhanced by its ability to detect HIV gp41 IgM antibodies","year":2015,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Simon Fraser University","keywords":"Seroconversion; Antibody; Gp41; Immunoassay; Virology; Antigen; Immunoglobulin M; Immunology; Immunoglobulin G; Medicine; Epitope","score_opus":0.039847676953024845,"score_gpt":0.3826707509362889,"score_spread":0.34282307398326406,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1926731915","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9810976,0.0013169231,0.015120969,0.000992854,0.00051750743,0.00042062913,0.0004389397,0.000008762855,0.0000858144],"genre_scores_gemma":[0.9989369,0.00018468371,0.0005572551,0.00012775896,0.00007898999,0.000006927402,0.000028686052,0.000012909798,0.00006587059],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9957587,0.0019754376,0.0014576911,0.00029722202,0.000118516415,0.00039244696],"domain_scores_gemma":[0.9948255,0.0026797948,0.00090824516,0.00027848643,0.0011509184,0.0001570807],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004184484,0.00018565994,0.0012348926,0.00015836422,0.00006247421,0.0000050930944,0.00018153277,0.00047423143,0.000089867164],"category_scores_gemma":[0.005810726,0.00014070285,0.0005186217,0.00011083879,0.0004731747,0.00010182697,0.0000941707,0.0005317184,0.0000824477],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0112083275,0.0005328859,0.019117601,0.000073138865,0.0005999399,0.000012469505,0.0007591311,0.000009612037,0.9340933,0.00000590002,0.0017763021,0.03181142],"study_design_scores_gemma":[0.0072670165,0.018354187,0.09391456,0.000044900647,0.00018552068,0.00006878097,0.000274765,0.000013825598,0.87575006,0.00019997204,0.0037748734,0.00015151301],"about_ca_topic_score_codex":0.0000419638,"about_ca_topic_score_gemma":0.00006282111,"teacher_disagreement_score":0.07479696,"about_ca_system_score_codex":0.00005366794,"about_ca_system_score_gemma":0.000205702,"threshold_uncertainty_score":0.69564015},"labels":[],"label_agreement":null},{"id":"W1943174599","doi":"10.1016/j.jcv.2015.10.026","title":"Primary HPV DNA based cervical cancer screening at 25 years: Views of young Australian women aged 16–28 years","year":2015,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Centre for Disease Control","funders":"","keywords":"Medicine; Cervical screening; Worry; Cervical cancer screening; Family medicine; Cervical cancer; Young adult; Gynecology; Demography; Gerontology; Cancer; Internal medicine; Psychiatry","score_opus":0.2191633762094207,"score_gpt":0.47031085096233677,"score_spread":0.2511474747529161,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1943174599","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9901151,0.0006101342,0.00011686321,0.004292292,0.0006728973,0.0001957124,0.000016206845,0.0000112090065,0.0039695543],"genre_scores_gemma":[0.99149233,0.000285155,0.00094812905,0.003803887,0.0017487574,0.000009433842,0.000009015315,0.000032025924,0.0016712609],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.995913,0.0005852112,0.001796734,0.0002699779,0.0009106647,0.00052439835],"domain_scores_gemma":[0.9967565,0.00077811885,0.00068547454,0.0003294919,0.00040266395,0.0010477745],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.004091785,0.00016246282,0.0014084305,0.00020017714,0.000026476802,0.000011599924,0.00034095108,0.00041151076,0.008771382],"category_scores_gemma":[0.0014794738,0.00013066102,0.00047521605,0.00024786702,0.00041519167,0.00008764157,0.00016690943,0.0013820796,0.000055689423],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.029503493,0.0012616349,0.6935494,0.00027410898,0.00070147886,0.0011428731,0.0006882569,0.00008877876,0.0017313756,0.00002103384,0.052001506,0.21903607],"study_design_scores_gemma":[0.0090338085,0.003112925,0.9112067,0.00005148567,0.00013610742,0.00008868406,0.000079240584,0.000056047757,0.00011638754,0.000117426396,0.07589284,0.00010833534],"about_ca_topic_score_codex":0.000111165464,"about_ca_topic_score_gemma":0.00021494547,"teacher_disagreement_score":0.21892774,"about_ca_system_score_codex":0.00039296265,"about_ca_system_score_gemma":0.0008854126,"threshold_uncertainty_score":0.99213475},"labels":[],"label_agreement":null},{"id":"W1965926466","doi":"10.1016/s1386-6532(02)00107-5","title":"Antiviral therapy for hepatitis B virus infections: new targets and technical challenges","year":2002,"lang":"en","type":"review","venue":"Journal of Clinical Virology","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Entecavir; Adefovir; Lamivudine; Virology; Hepatitis B virus; Nucleoside analogue; Antiviral drug; Nucleoside; Medicine; Hepatitis B; Virus; Biology; Genetics","score_opus":0.2368458878339441,"score_gpt":0.477678060477083,"score_spread":0.2408321726431389,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1965926466","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00024356568,0.9947222,0.00021817698,0.0020534098,0.0012537995,0.00094129675,0.000028829692,0.000030279123,0.00050848105],"genre_scores_gemma":[0.00021273442,0.99296325,0.0020278485,0.00069055177,0.0037704813,0.000044274428,0.0000058690594,0.00007402024,0.00021098777],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99505293,0.0005801668,0.0032544541,0.00043548297,0.00027931723,0.0003976177],"domain_scores_gemma":[0.9929665,0.004146896,0.0019642848,0.00032040855,0.00025625835,0.0003456626],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0017650042,0.00045806446,0.005786721,0.0003386036,0.00009721745,0.000014921098,0.00020213745,0.0012643503,0.00010111622],"category_scores_gemma":[0.005041009,0.00031193488,0.0017084293,0.00012873729,0.0004473518,0.00009629397,0.000102865066,0.0017608039,0.00003421343],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018565958,0.0006125679,0.0027287656,0.0013092178,0.0010459481,0.00014635261,0.000017394514,1.9199408e-8,9.540889e-7,0.000121294375,0.012790038,0.9810418],"study_design_scores_gemma":[0.0024210624,0.009914941,0.009137132,0.0024692223,0.0014921472,0.001608076,8.659248e-7,0.0000018067722,4.1697956e-7,0.0005808366,0.9721446,0.00022887545],"about_ca_topic_score_codex":0.00006075417,"about_ca_topic_score_gemma":0.00045715546,"teacher_disagreement_score":0.9808129,"about_ca_system_score_codex":0.0000613172,"about_ca_system_score_gemma":0.00048326925,"threshold_uncertainty_score":0.9999333},"labels":[],"label_agreement":null},{"id":"W1968107050","doi":"10.1016/j.jcv.2010.06.014","title":"Transmission dynamics of rabies in China over the last 40 years: 1969–2009","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Rabies epidemiology and control","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"National High-tech Research and Development Program","keywords":"Rabies; China; Transmission (telecommunications); Virology; Dynamics (music); Geography; Medicine; Psychology; Telecommunications; Computer science; Archaeology","score_opus":0.01488186530600931,"score_gpt":0.3301125251736418,"score_spread":0.3152306598676325,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1968107050","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9886235,0.001024883,0.00050890364,0.0072044823,0.0021118894,0.000090511945,0.000007652904,0.000005408748,0.00042279685],"genre_scores_gemma":[0.99783665,0.0005221209,0.00010719113,0.0011425179,0.00018401947,0.0000017690434,0.000003968637,0.000008987776,0.0001927826],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99642146,0.0012955692,0.0017937951,0.0001625857,0.00004243802,0.00028418432],"domain_scores_gemma":[0.9956677,0.0030055156,0.00096653047,0.00026055824,0.00006266315,0.00003703266],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.004067622,0.00013353692,0.0009503397,0.000117106974,0.000050011146,0.0000027465994,0.00050426787,0.00092349836,0.0006315078],"category_scores_gemma":[0.0019093596,0.00008041464,0.00040534209,0.00009222465,0.0010584338,0.00007005371,0.00004691032,0.002625679,0.00003158927],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010221553,0.0014966951,0.7012968,0.00002488042,0.00089536584,0.000110129055,0.00067021925,0.00025704154,0.08533843,0.0134547,0.008640801,0.17759341],"study_design_scores_gemma":[0.0033486425,0.0009057499,0.9443204,0.000018277906,0.000069693,0.00020500117,0.000039131508,0.00011525138,0.00017577437,0.0054469286,0.04527803,0.00007714718],"about_ca_topic_score_codex":0.000029780413,"about_ca_topic_score_gemma":0.0002722848,"teacher_disagreement_score":0.24302359,"about_ca_system_score_codex":0.0000075543285,"about_ca_system_score_gemma":0.000115398456,"threshold_uncertainty_score":0.99967533},"labels":[],"label_agreement":null},{"id":"W1969082035","doi":"10.1016/j.jcv.2013.08.008","title":"Comparative evaluation of the Bio-Rad Geenius HIV-1/2 Confirmatory Assay and the Bio-Rad Multispot HIV-1/2 Rapid Test as an alternative differentiation assay for CLSI M53 algorithm-I","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Capital District Health Authority; Provincial Laboratory of Public Health; Saskatchewan Disease Control Laboratory; Public Health Agency of Canada","funders":"Public Health Agency of Canada","keywords":"Human immunodeficiency virus (HIV); Medicine; Virology","score_opus":0.07847192730165849,"score_gpt":0.4010326856649862,"score_spread":0.3225607583633277,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969082035","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98788774,0.0019096208,0.0023467976,0.004798388,0.0010427076,0.0015608317,0.00022546558,0.000008671506,0.00021976845],"genre_scores_gemma":[0.99826497,0.00038375592,0.00035623414,0.00033050406,0.00021856173,0.00009309089,0.00010347576,0.000013848138,0.00023556469],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9910943,0.0065030307,0.001480615,0.0003095338,0.0002472396,0.0003652803],"domain_scores_gemma":[0.9877494,0.009090423,0.0016301484,0.0003507372,0.0010740107,0.000105295294],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.006538065,0.00023998714,0.0010110273,0.00012964019,0.00026559993,0.000030254718,0.0004701509,0.00039884954,0.00055056583],"category_scores_gemma":[0.0033557182,0.00012479037,0.0003845991,0.00009266466,0.0016914885,0.00020715538,0.00011228804,0.0008387716,0.00018348295],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.013553871,0.010753789,0.2960381,0.000081972954,0.012582286,0.000023739007,0.0072665876,0.00014874595,0.07102763,0.0027576352,0.03422517,0.5515405],"study_design_scores_gemma":[0.047110703,0.0059474343,0.9033923,0.00006578627,0.0012661837,0.00024244307,0.0009281918,0.014694633,0.012784968,0.005609865,0.007664896,0.00029257193],"about_ca_topic_score_codex":0.00008366987,"about_ca_topic_score_gemma":0.00003929349,"teacher_disagreement_score":0.6073542,"about_ca_system_score_codex":0.00005720258,"about_ca_system_score_gemma":0.00031995517,"threshold_uncertainty_score":0.623236},"labels":[],"label_agreement":null},{"id":"W1969291430","doi":"10.1016/s1386-6532(03)00050-7","title":"Generation and characterization of a monoclonal antibody specific for human herpesvirus 6 variant A immediate–early 2 protein","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Intégré de Santé et de Services Sociaux des Laurentides","funders":"","keywords":"Monoclonal antibody; Restriction enzyme; Molecular biology; Biology; Recombinant DNA; Fusion protein; Antibody; Immunoglobulin light chain; Virology; Western blot; DNA; Gene; Genetics","score_opus":0.1296811497884698,"score_gpt":0.4320930458712543,"score_spread":0.3024118960827845,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969291430","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99399734,0.00019035516,0.004164259,0.000787043,0.00019896326,0.0005038803,0.000015187504,0.0000036643273,0.00013932642],"genre_scores_gemma":[0.9959606,0.00041304948,0.0021149796,0.0002439434,0.0010215879,0.000009888099,0.000019449551,0.000019302443,0.00019720879],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9975815,0.00027413707,0.001468041,0.0001947509,0.0002654689,0.00021610357],"domain_scores_gemma":[0.99831915,0.00020737798,0.0007433423,0.00014710193,0.00037388524,0.00020915885],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023396953,0.00011534113,0.0007547982,0.00018235955,0.00006335019,0.000018684961,0.000075533695,0.0002640057,0.00019327391],"category_scores_gemma":[0.0004883874,0.000089761284,0.00022073854,0.000105652376,0.00018209891,0.000110844245,0.000018943902,0.00044931401,0.0000039213137],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021271,0.0005634281,0.014475586,0.00004022866,0.00013946145,0.00007472887,0.00007212034,7.4186664e-7,0.97266114,0.0028257715,0.00012977848,0.0068898955],"study_design_scores_gemma":[0.018107591,0.015905043,0.79455376,0.00013452434,0.00024677103,0.0006230587,0.000023109806,0.0005817817,0.04571824,0.002971081,0.12085602,0.00027904735],"about_ca_topic_score_codex":0.000009340074,"about_ca_topic_score_gemma":0.0000055135215,"teacher_disagreement_score":0.92694294,"about_ca_system_score_codex":0.00001892977,"about_ca_system_score_gemma":0.00021273209,"threshold_uncertainty_score":0.3660359},"labels":[],"label_agreement":null},{"id":"W1969353645","doi":"10.1016/j.jcv.2014.08.031","title":"Advances in the understanding, management, and prevention of dengue","year":2014,"lang":"en","type":"review","venue":"Journal of Clinical Virology","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":45,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; National Institutes of Health","keywords":"Dengue fever; Disease; Transmission (telecommunications); Medicine; Dengue vaccine; Environmental health; Epidemiology; Intensive care medicine; Disease control; Clinical trial; Epidemiologic Surveillance; Dengue virus; Immunology; Computer science","score_opus":0.17451139770232815,"score_gpt":0.5193306562024613,"score_spread":0.3448192585001332,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969353645","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00015558871,0.9962931,0.0013332097,0.00024804712,0.0002702065,0.0003474578,0.0000016800079,0.0000012650108,0.0013493955],"genre_scores_gemma":[0.004352836,0.994728,0.000092208065,0.00029322854,0.00044915936,0.0000057630004,0.0000027131396,0.000009653501,0.00006640685],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99691564,0.00076076394,0.0018658522,0.00014300612,0.00019217088,0.00012255069],"domain_scores_gemma":[0.996803,0.0011202148,0.0017747039,0.00019229771,0.000033295102,0.0000764752],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024440675,0.00013151171,0.002089871,0.00014487877,0.0000138217965,0.000005540924,0.00018374585,0.00022827242,0.000037395825],"category_scores_gemma":[0.00042551302,0.00006961094,0.0007417074,0.00008759533,0.00013825035,0.000041348558,0.00003342253,0.0005739661,0.0000018156435],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023013524,0.00019612147,0.0008321018,0.0057103117,0.00024527463,0.000097883494,0.0000064895485,3.0486666e-7,1.5137129e-8,0.0039874082,0.0003441949,0.98834974],"study_design_scores_gemma":[0.0021825314,0.0014763072,0.003109031,0.005134244,0.0035696707,0.00019992924,0.000059981077,0.0000060460543,3.989613e-9,0.005996326,0.97820747,0.000058458696],"about_ca_topic_score_codex":4.4814036e-7,"about_ca_topic_score_gemma":0.000006403228,"teacher_disagreement_score":0.9882913,"about_ca_system_score_codex":0.000017805873,"about_ca_system_score_gemma":0.00008608742,"threshold_uncertainty_score":0.28386518},"labels":[],"label_agreement":null},{"id":"W1973311855","doi":"10.1016/j.jcv.2014.03.008","title":"Acute liver failure in an immunocompetent patient","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Liver Disease and Transplantation","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Alberta Innovates - Health Solutions","keywords":"Liver failure; Medicine; Gastroenterology","score_opus":0.031710297696349005,"score_gpt":0.3658952610352563,"score_spread":0.33418496333890735,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1973311855","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978097,0.00008221734,0.00028120255,0.0013159548,0.000284255,0.00007535404,0.0000018040246,0.000004157117,0.00014535745],"genre_scores_gemma":[0.99626917,0.00029551287,0.0008526256,0.002237986,0.0003237682,9.973853e-7,0.000005881095,0.0000062890385,0.0000077894],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984814,0.000294051,0.00085137144,0.0001001837,0.000153778,0.000119246186],"domain_scores_gemma":[0.99906206,0.00024983182,0.0002922493,0.00011891487,0.000101510464,0.0001754074],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005331208,0.00006695159,0.00041314843,0.00008664721,0.000012921485,0.0000044226413,0.00007392505,0.00012838506,0.000107624786],"category_scores_gemma":[0.000047068937,0.00004743055,0.00018226962,0.00004233045,0.000059303125,0.000107903405,0.000010308739,0.00040816522,0.000028665158],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.012782152,0.0024113038,0.92251784,0.000058252394,0.0009547012,0.0025012144,0.0008753691,0.00006306709,0.005124229,0.00067236787,0.00036090895,0.051678617],"study_design_scores_gemma":[0.005117354,0.006381144,0.9843556,0.00005025268,0.00059409416,0.00034489334,0.000037481655,0.00037769575,0.00015205838,0.0003572925,0.002176366,0.000055733177],"about_ca_topic_score_codex":0.0000040336427,"about_ca_topic_score_gemma":0.00002278232,"teacher_disagreement_score":0.06183782,"about_ca_system_score_codex":0.0000105171375,"about_ca_system_score_gemma":0.00006795034,"threshold_uncertainty_score":0.19341616},"labels":[],"label_agreement":null},{"id":"W1976070873","doi":"10.1016/j.jcv.2013.08.029","title":"Genetic diversity and molecular evolution of the major human metapneumovirus surface glycoproteins over a decade","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Respiratory viral infections research","field":"Medicine","cited_by":53,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de Santé Publique du Québec; McGill University Health Centre; Montreal Children's Hospital; Centre hospitalier de l'Université Laval","funders":"","keywords":"Human metapneumovirus; Biology; Lineage (genetic); Genetic diversity; Virology; Metapneumovirus; Genetics; Molecular evolution; Phylogenetic tree; Evolutionary biology; Gene; Respiratory tract infections; Population; Respiratory system","score_opus":0.06695868418361159,"score_gpt":0.40713575843291666,"score_spread":0.3401770742493051,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1976070873","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99747014,0.000590491,0.000366216,0.0009870345,0.00013630083,0.00030421713,0.0000010975292,0.0000036592576,0.0001408622],"genre_scores_gemma":[0.9988449,0.00004071321,0.00036739514,0.0005537782,0.00010669951,0.0000014148483,5.7125284e-8,0.000008188254,0.00007685643],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978155,0.0006275888,0.0008699107,0.00013903977,0.00037678736,0.00017121238],"domain_scores_gemma":[0.9984876,0.0002577418,0.0005140463,0.00026628713,0.00029575487,0.00017858834],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010514263,0.000087957735,0.0004966163,0.0000958514,0.00019089565,0.0000069068365,0.00019364542,0.00021249565,0.00024582096],"category_scores_gemma":[0.0011204809,0.000054823133,0.00027992146,0.00016024883,0.000508523,0.00009117419,0.0004384965,0.0007516703,0.000013408509],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022046875,0.00021698486,0.76839715,0.000019899895,0.00020469737,0.000037072594,0.000022457893,0.000028895654,0.22989921,0.0001641297,0.00024343622,0.00054557156],"study_design_scores_gemma":[0.0018904319,0.0019655302,0.9907007,0.000017672783,0.00019226913,0.00014983836,0.000011497468,0.000114103634,0.0031131858,0.0014462192,0.00035509214,0.000043447682],"about_ca_topic_score_codex":0.00035256552,"about_ca_topic_score_gemma":0.000024965535,"teacher_disagreement_score":0.22678602,"about_ca_system_score_codex":0.00004945649,"about_ca_system_score_gemma":0.000115264134,"threshold_uncertainty_score":0.32656753},"labels":[],"label_agreement":null},{"id":"W1977588769","doi":"10.1016/j.jcv.2013.06.037","title":"Co-circulation of multiple genotypes of human rhinovirus during a large outbreak of respiratory illness in a veterans’ long-term care home","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Respiratory viral infections research","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; St. Joseph’s Healthcare Hamilton; Health Sciences Centre; Sunnybrook Health Science Centre","funders":"","keywords":"Outbreak; Rhinovirus; Medicine; Genotyping; Genotype; Virology; Epidemiology; Human metapneumovirus; Respiratory system; Internal medicine; Biology; Respiratory tract infections; Genetics","score_opus":0.0883640159905651,"score_gpt":0.45443630935293133,"score_spread":0.36607229336236624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1977588769","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986406,0.0005924041,0.000066347464,0.000044853405,0.00015861474,0.00037413192,0.00001159288,0.0000049815385,0.00010647234],"genre_scores_gemma":[0.99956316,0.00005064053,0.000049914284,0.0000951921,0.00020020948,0.000007659569,0.0000029018668,0.000020910815,0.000009421306],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9957184,0.00067698513,0.0027220133,0.00018834184,0.0004351979,0.00025906146],"domain_scores_gemma":[0.99678546,0.00059496256,0.0013016822,0.00034532035,0.00081892655,0.00015361693],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015923887,0.00013520737,0.0012042507,0.0006711373,0.00004195669,0.0000051162065,0.0002023551,0.0003542018,0.00026917952],"category_scores_gemma":[0.0012860579,0.00011129092,0.00036702715,0.0002431232,0.00037251352,0.00018416154,0.000053827407,0.0007785071,0.000010383026],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009888749,0.00054215844,0.707978,0.00035708392,0.000103800296,0.000053957287,0.0003422276,0.0000485354,0.28750122,0.000013384101,0.0000061113406,0.002064639],"study_design_scores_gemma":[0.0073998044,0.0031462535,0.96890825,0.00018640178,0.000060550596,0.000034811626,0.00011187586,0.00002853511,0.019959355,0.000036390928,0.000047292942,0.00008045219],"about_ca_topic_score_codex":0.00011851,"about_ca_topic_score_gemma":0.00016038268,"teacher_disagreement_score":0.26754186,"about_ca_system_score_codex":0.00006730985,"about_ca_system_score_gemma":0.00021597216,"threshold_uncertainty_score":0.45383123},"labels":[],"label_agreement":null},{"id":"W1980385037","doi":"10.1016/j.jcv.2004.07.011","title":"Establishment of conventional and fluorescence resonance energy transfer-based real-time PCR assays for detection of pathogenic New World arenaviruses","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Bundesministerium für Gesundheit","keywords":"Förster resonance energy transfer; Energy transfer; Fluorescence; Nuclear magnetic resonance; Chemistry; Physics; Optics; Chemical physics","score_opus":0.0661685477689605,"score_gpt":0.38443974726232083,"score_spread":0.31827119949336036,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1980385037","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9634216,0.0005361869,0.03406125,0.0014555992,0.00022246568,0.00017440406,0.00002451483,0.0000062053605,0.00009781423],"genre_scores_gemma":[0.9955054,0.00090323633,0.0029399248,0.00017854077,0.00029385363,0.000004667742,0.0000037675943,0.000011453338,0.00015916821],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9979032,0.00015724238,0.0013104876,0.00016324989,0.00028769666,0.0001780857],"domain_scores_gemma":[0.9981233,0.0007960272,0.00037313017,0.00012321211,0.00038113073,0.00020319804],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012570112,0.00009915525,0.00065666274,0.00024534413,0.0000362008,0.0000051295137,0.00008033755,0.00016314023,0.000079458456],"category_scores_gemma":[0.00059673033,0.00007776184,0.00038932852,0.00019458818,0.0002880675,0.00007867225,0.000015194174,0.0002923379,9.16456e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.013183508,0.0015123885,0.016329043,0.00013836255,0.00022114583,0.00004423113,0.00002124148,0.00022000537,0.874338,0.001399397,0.0003491438,0.09224358],"study_design_scores_gemma":[0.03378621,0.030090602,0.48136893,0.0007366537,0.0006349718,0.00033531373,0.000023154724,0.0015405763,0.4305328,0.0056826947,0.015017635,0.00025044515],"about_ca_topic_score_codex":0.00015927057,"about_ca_topic_score_gemma":0.00014730023,"teacher_disagreement_score":0.4650399,"about_ca_system_score_codex":0.000036762587,"about_ca_system_score_gemma":0.0005605431,"threshold_uncertainty_score":0.31710356},"labels":[],"label_agreement":null},{"id":"W1983477252","doi":"10.1016/j.jcv.2009.08.012","title":"Neurodevelopmental outcomes following ganciclovir therapy in symptomatic congenital cytomegalovirus infections involving the central nervous system","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":272,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Center for Research Resources; National Institute of Allergy and Infectious Diseases","keywords":"Ganciclovir; Medicine; Cytomegalovirus; Pediatrics; Betaherpesvirinae; Human cytomegalovirus; Population; Herpesviridae; Viral disease; Immunology; Virus","score_opus":0.056240766368742555,"score_gpt":0.3870786219038206,"score_spread":0.33083785553507805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983477252","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9921073,0.00071367476,0.000042338324,0.004775507,0.0012025584,0.0004282604,0.000002410591,0.000034022636,0.0006939792],"genre_scores_gemma":[0.9949853,0.0003687453,0.00013746676,0.003992695,0.00042782215,0.0000057806183,0.0000014446482,0.00002478011,0.00005600406],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9956049,0.00063270767,0.0022549522,0.00026152589,0.0006060137,0.0006399295],"domain_scores_gemma":[0.9971505,0.0015102507,0.00056995533,0.000312848,0.00009709787,0.00035937285],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026583767,0.00024923956,0.0012763605,0.00036402117,0.00016454475,0.00006030437,0.00033917633,0.00028119478,0.000059009966],"category_scores_gemma":[0.0012465181,0.0001514348,0.0008349097,0.00042372211,0.00017515135,0.00022611722,0.000059848695,0.0015864439,0.00003628875],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00078738155,0.00088872545,0.9592275,0.000018157752,0.00042068813,0.0012906111,0.00033109286,0.00003336979,0.002129822,0.00019843671,0.00029731108,0.03437692],"study_design_scores_gemma":[0.0052220365,0.002570765,0.98854446,0.00007528966,0.00008914018,0.0007207299,0.00022011525,0.00032706634,0.000051042472,0.00008844654,0.0019582803,0.00013264088],"about_ca_topic_score_codex":0.000061365616,"about_ca_topic_score_gemma":0.00009492843,"teacher_disagreement_score":0.034244277,"about_ca_system_score_codex":0.00020720396,"about_ca_system_score_gemma":0.00056656095,"threshold_uncertainty_score":0.68923974},"labels":[],"label_agreement":null},{"id":"W1984395968","doi":"10.1016/j.jcv.2004.09.003","title":"Monoclonal antibody hNM01 in HIV-infected patients: a phase I study","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Center for Research Resources","keywords":"Antibody; Monoclonal antibody; Adverse effect; Medicine; Viral load; Immunology; Virology; Idiotype; Monoclonal; Virus; Internal medicine; Pharmacology","score_opus":0.04413895810300436,"score_gpt":0.44184120804794597,"score_spread":0.39770224994494163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1984395968","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99753606,0.00034061653,0.00013022924,0.000804316,0.0006706112,0.00030114024,0.0000295186,0.00000954873,0.00017794238],"genre_scores_gemma":[0.9993057,0.00012989287,0.00011006883,0.00020871118,0.00010056363,0.0000055935357,0.000059418406,0.000010401906,0.0000696482],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9967249,0.0009752736,0.0015624539,0.00023175345,0.000087785265,0.00041785729],"domain_scores_gemma":[0.99833417,0.0006801821,0.00050213246,0.00019513723,0.00018996913,0.00009838243],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0012896351,0.00015846986,0.00080827955,0.00025653496,0.00006021453,0.0000076506,0.00027081135,0.00029938028,0.00048606275],"category_scores_gemma":[0.0013210898,0.00011287562,0.00025211342,0.00016261885,0.0002593302,0.000106831205,0.00008191028,0.0011129124,0.0008630515],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0057774815,0.031704023,0.9478055,0.0000030704566,0.0006157869,0.0008016097,0.00023822258,0.000026394915,0.0030013607,0.000058966234,0.0005594143,0.009408117],"study_design_scores_gemma":[0.07254395,0.02342411,0.89756584,0.000016935488,0.000073349824,0.00010712808,0.000085532345,8.622527e-7,0.00020607129,0.00031192633,0.005563055,0.00010121531],"about_ca_topic_score_codex":0.000037143956,"about_ca_topic_score_gemma":0.00005590134,"teacher_disagreement_score":0.06676646,"about_ca_system_score_codex":0.000059751525,"about_ca_system_score_gemma":0.00028824224,"threshold_uncertainty_score":0.9999149},"labels":[],"label_agreement":null},{"id":"W1985736856","doi":"10.1016/s1386-6532(07)70006-9","title":"Respiratory virus surveillance and outbreak investigation","year":2007,"lang":"en","type":"review","venue":"Journal of Clinical Virology","topic":"Respiratory viral infections research","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Provincial Laboratory of Public Health","funders":"University of Alberta","keywords":"Virology; Outbreak; Human bocavirus; Virus; Biology; Influenza A virus; Orthomyxoviridae; Respiratory system; Respiratory tract infections","score_opus":0.429284035686104,"score_gpt":0.5781683038371068,"score_spread":0.1488842681510028,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1985736856","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.007367478,0.99019563,0.00006086825,0.00015771475,0.0008637161,0.00040858614,0.0000073442357,0.00001528657,0.0009233829],"genre_scores_gemma":[0.00013511453,0.99525166,0.00022304073,0.0017446511,0.0024479348,0.000005859326,0.0000041236667,0.000050404684,0.00013723123],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9926114,0.0020264983,0.0041497624,0.00036271758,0.0005071347,0.00034246602],"domain_scores_gemma":[0.99262834,0.0035130612,0.0023276252,0.00043399903,0.00046872505,0.0006282793],"candidate_categories":["research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.0107847685,0.0003133775,0.003840461,0.0008007522,0.00006181555,0.000024963158,0.00022592019,0.0013295539,0.0000999124],"category_scores_gemma":[0.0063765766,0.00021703071,0.0008711102,0.000424826,0.0008406445,0.00011131113,0.0001226299,0.003359612,0.00010395798],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024466234,0.00012611203,0.009274088,0.0020479562,0.00036143104,0.0004527642,0.000003979213,1.8120369e-7,0.000011956042,0.000039532155,0.0021307135,0.9853066],"study_design_scores_gemma":[0.00106199,0.0031448565,0.013609804,0.0014738728,0.00042003277,0.001131453,0.0000017564878,0.0000012966912,0.000002283201,0.00008561969,0.9789212,0.00014586614],"about_ca_topic_score_codex":0.0000063884863,"about_ca_topic_score_gemma":0.00001940372,"teacher_disagreement_score":0.98516077,"about_ca_system_score_codex":0.0001024304,"about_ca_system_score_gemma":0.0014271059,"threshold_uncertainty_score":0.9999669},"labels":[],"label_agreement":null},{"id":"W1986303017","doi":"10.1016/j.jcv.2014.11.011","title":"The emergence of enterovirus D68 in a Dutch University Medical Center and the necessity for routinely screening for respiratory viruses","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Viral Infections and Immunology Research","field":"Medicine","cited_by":102,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Rhinovirus; Enterovirus; Medicine; Respiratory system; Population; Pediatrics; Asthma; Virology; Internal medicine; Virus; Environmental health","score_opus":0.14133666809849296,"score_gpt":0.4658057528975639,"score_spread":0.3244690847990709,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1986303017","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9781038,0.0003941037,0.0124312965,0.008449554,0.000285547,0.00022726408,0.0000034584118,0.0000021253584,0.000102852464],"genre_scores_gemma":[0.99627525,0.0005478437,0.00022958092,0.0026647926,0.00022914224,0.0000022716965,2.3634587e-7,0.0000048959164,0.000046005727],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99799097,0.00075509155,0.00082251854,0.00010578981,0.00014839732,0.00017723216],"domain_scores_gemma":[0.99402857,0.0050952593,0.00042972315,0.00014096417,0.00022410876,0.00008140457],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.007831196,0.00006185856,0.00048709725,0.0000727212,0.00013793935,0.000004466172,0.00020950664,0.0001848803,0.000020591222],"category_scores_gemma":[0.009013441,0.00003176211,0.00024025365,0.000075391246,0.0010376476,0.000055112447,0.000096441305,0.00060510077,5.433858e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.03413589,0.00036185482,0.90928173,0.00003193844,0.00027881574,0.000009916534,0.000075372714,0.0000028003587,0.00053511956,0.002246109,0.0015256412,0.051514786],"study_design_scores_gemma":[0.0349292,0.008131754,0.77886766,0.000112744885,0.00014252977,0.00008640014,0.00035968155,0.0024598502,0.00017996308,0.0013142163,0.17333965,0.00007635535],"about_ca_topic_score_codex":0.0000231474,"about_ca_topic_score_gemma":0.00013269966,"teacher_disagreement_score":0.17181401,"about_ca_system_score_codex":0.0000065131817,"about_ca_system_score_gemma":0.000114168826,"threshold_uncertainty_score":0.99933404},"labels":[],"label_agreement":null},{"id":"W1990711985","doi":"10.1016/j.jcv.2010.08.008","title":"Contrasting effects on ganciclovir susceptibility and replicative capacity of two mutations at codon 466 of the human cytomegalovirus UL97 gene","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier universitaire de Québec","funders":"Canadian Institutes of Health Research","keywords":"Human cytomegalovirus; Ganciclovir; Mutant; Biology; Virology; Mutation; Gene; Recombinant DNA; Viral replication; Virus; Molecular biology; Genetics","score_opus":0.07276796593801522,"score_gpt":0.42581862623466293,"score_spread":0.3530506602966477,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990711985","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973783,0.0000671702,0.00003696075,0.001225726,0.00028948433,0.00041490883,0.00002904962,0.0000058152964,0.0005526154],"genre_scores_gemma":[0.9984952,0.000043019267,0.00046955614,0.00045501528,0.00044566588,0.0000038788603,0.0000016627052,0.000017059438,0.00006892276],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9965404,0.00065917516,0.0017634217,0.00029494934,0.00046777862,0.0002742418],"domain_scores_gemma":[0.9922758,0.0047695106,0.001514342,0.00056835916,0.00058465666,0.00028735396],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004033133,0.00016182319,0.0011569003,0.00013790086,0.00014438023,0.0000065944882,0.0002498129,0.00028939784,0.00011827817],"category_scores_gemma":[0.0075211604,0.0001025505,0.0004211299,0.00018987391,0.001504914,0.00005750084,0.00013899294,0.0017953557,0.000006182986],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014141109,0.00044901535,0.34701622,0.00007107591,0.00015230839,0.000020218307,0.0001297662,0.0000035078783,0.64635277,0.0004100855,0.00008473063,0.0038961612],"study_design_scores_gemma":[0.004939903,0.0033372978,0.8100259,0.000064547974,0.00017475162,0.00016659596,0.00001433359,0.000064078595,0.17933825,0.001149989,0.0006541287,0.00007027551],"about_ca_topic_score_codex":0.00011404742,"about_ca_topic_score_gemma":0.0005202856,"teacher_disagreement_score":0.46701455,"about_ca_system_score_codex":0.00005094979,"about_ca_system_score_gemma":0.00021926481,"threshold_uncertainty_score":0.9004075},"labels":[],"label_agreement":null},{"id":"W1990730191","doi":"10.1016/j.jcv.2014.06.020","title":"Evolution of an influenza pandemic in 13 countries from 5 continents monitored by protein microarray from neonatal screening bloodspots","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Rijksinstituut voor Volksgezondheid en Milieu","keywords":"Pandemic; Virology; Seroprevalence; Medicine; Outbreak; Population; Virus; Influenza A virus; Serology; Immunology; Coronavirus disease 2019 (COVID-19); Environmental health; Internal medicine; Antibody","score_opus":0.0712113255758483,"score_gpt":0.42319966559134686,"score_spread":0.35198834001549856,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990730191","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951013,0.0029020912,0.0008536952,0.0004999401,0.00022230194,0.00029767174,0.000090639456,0.000012661012,0.00001970884],"genre_scores_gemma":[0.9942365,0.00017098094,0.0038007845,0.00083725725,0.0008914751,0.000006751231,0.0000145243885,0.00002207979,0.000019610634],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9953263,0.00096209056,0.0024135623,0.00030121795,0.0006146575,0.00038219744],"domain_scores_gemma":[0.9959411,0.0017099573,0.0012972656,0.00030351212,0.00048572646,0.00026241093],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025872102,0.00020341304,0.0014363284,0.00021464935,0.000051545656,0.000012457441,0.00031110924,0.00046332844,0.000069959315],"category_scores_gemma":[0.0065134377,0.00016115016,0.00023136497,0.00012523464,0.0006366893,0.00024449144,0.00011281309,0.0012922566,0.0000145817885],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010627614,0.0003260893,0.91605175,0.00001808009,0.0003185523,0.000045697932,0.00018154648,0.000027590606,0.064514935,0.0000052339965,0.00033207238,0.0075508393],"study_design_scores_gemma":[0.015602439,0.0026267723,0.96449244,0.00029652362,0.00014078127,0.000014965241,0.0001458808,0.0004360568,0.004241532,0.0006991228,0.011172576,0.00013090394],"about_ca_topic_score_codex":0.0016049959,"about_ca_topic_score_gemma":0.00018672002,"teacher_disagreement_score":0.060273405,"about_ca_system_score_codex":0.00007027433,"about_ca_system_score_gemma":0.00021777551,"threshold_uncertainty_score":0.7797664},"labels":[],"label_agreement":null},{"id":"W1990767839","doi":"10.1016/j.jcv.2012.04.022","title":"Enhanced detection of Rift Valley fever virus using molecular assays on whole blood samples","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"National Institutes of Health","keywords":"Rift Valley fever; Whole blood; Virology; Outbreak; Biology; Veterinary medicine; Medicine; Immunology","score_opus":0.10375057488333282,"score_gpt":0.4184892382587144,"score_spread":0.3147386633753816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990767839","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97987723,0.00021084577,0.018255759,0.00018848381,0.0010631769,0.000078905745,0.000002197104,0.000007838393,0.00031554146],"genre_scores_gemma":[0.99716175,0.00009085196,0.0011156044,0.0006447511,0.0009469244,7.868784e-7,6.776308e-7,0.000016341313,0.000022315515],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99800223,0.0003140677,0.0011336993,0.00011305541,0.00021367855,0.00022325714],"domain_scores_gemma":[0.99824595,0.00042156712,0.0007810052,0.00017340141,0.0001785043,0.00019954621],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013609185,0.000115062336,0.00067336817,0.00016789064,0.00004195284,0.0000038567587,0.00006494955,0.00029788108,0.0001150026],"category_scores_gemma":[0.0013765169,0.000086138294,0.00044001112,0.00012562827,0.00012083932,0.00010266647,0.000024734567,0.00065937435,0.00001628624],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000752523,0.0013224791,0.023616692,0.000014414667,0.00034589015,0.000021521531,0.00003627859,0.00016190863,0.9686313,0.000095250114,0.000033013686,0.004968697],"study_design_scores_gemma":[0.005284436,0.009369527,0.40822533,0.000110024615,0.0012338847,0.0006002982,0.000031400425,0.00023484499,0.56906354,0.00046476602,0.005209612,0.00017232419],"about_ca_topic_score_codex":0.000033946868,"about_ca_topic_score_gemma":0.000008189568,"teacher_disagreement_score":0.39956778,"about_ca_system_score_codex":0.000022964185,"about_ca_system_score_gemma":0.00007114394,"threshold_uncertainty_score":0.35126176},"labels":[],"label_agreement":null},{"id":"W1993142782","doi":"10.1016/j.jcv.2012.01.015","title":"Differential decay kinetics of human cytomegalovirus glycoprotein B genotypes following antiviral chemotherapy","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Human cytomegalovirus; Genotype; Ganciclovir; Viral load; Virology; Valganciclovir; Biology; Cytomegalovirus; Immunology; Virus; Herpesviridae; Internal medicine; Medicine; Viral disease; Gene; Genetics","score_opus":0.07249130493604991,"score_gpt":0.4297022457140089,"score_spread":0.357210940777959,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1993142782","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955264,0.00073252595,0.000704405,0.00070523017,0.0008018871,0.00022481049,0.0000046577984,0.000011253507,0.0012888503],"genre_scores_gemma":[0.9955989,0.00031889803,0.0008585157,0.00048639972,0.002438475,0.000002149346,0.000002968877,0.00004265717,0.00025099883],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99615896,0.0003322892,0.0020913808,0.00019127608,0.00065238745,0.00057369133],"domain_scores_gemma":[0.9975921,0.0005120846,0.00090704276,0.00033327882,0.00022330196,0.00043221493],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016169742,0.00021547738,0.0015430464,0.00029925542,0.00005549313,0.000014371497,0.00029283698,0.00045102136,0.00079909706],"category_scores_gemma":[0.0004736564,0.00015965605,0.001025421,0.00019714626,0.00034461205,0.0001573113,0.0000970568,0.0011015447,0.000043574808],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003936548,0.0020981007,0.252802,0.000054208485,0.0006912105,0.0001142279,0.0001450069,4.305812e-7,0.7116785,0.0002890212,0.0003895158,0.027801216],"study_design_scores_gemma":[0.01272257,0.009036028,0.76144445,0.00011278924,0.00047267482,0.00018544286,0.00003964086,0.000024944247,0.18993263,0.0003091463,0.025459157,0.0002605353],"about_ca_topic_score_codex":0.000029067352,"about_ca_topic_score_gemma":0.000012090992,"teacher_disagreement_score":0.52174586,"about_ca_system_score_codex":0.000043573273,"about_ca_system_score_gemma":0.00013043577,"threshold_uncertainty_score":0.8749553},"labels":[],"label_agreement":null},{"id":"W1995723259","doi":"10.1016/j.jcv.2007.11.012","title":"Human respiratory syncytial virus and other viral infections in infants receiving palivizumab","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Respiratory viral infections research","field":"Medicine","cited_by":62,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Cegep de Sainte Foy; Université Laval","funders":"Amylin Pharmaceuticals","keywords":"Palivizumab; Bronchiolitis; Virus; Virology; Human metapneumovirus; Etiology; Medicine; Pneumovirinae; Respiratory system; Respiratory tract infections; Pediatrics; Paramyxoviridae; Biology; Viral disease; Internal medicine","score_opus":0.17587376345549013,"score_gpt":0.49253717712009487,"score_spread":0.3166634136646047,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1995723259","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995681,0.0003788512,0.00005001403,0.00029728017,0.0004365939,0.00017847889,0.0000021682013,0.000017255554,0.0029583427],"genre_scores_gemma":[0.99576056,0.00022903427,0.00011250317,0.0024969012,0.0012268503,0.000006242208,2.2402779e-7,0.000027284017,0.00014040063],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9961585,0.0009643364,0.001939969,0.0002533731,0.00034651044,0.00033733805],"domain_scores_gemma":[0.99797404,0.00072393985,0.00052097515,0.00027636116,0.00019844832,0.00030626415],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0027991245,0.00015984332,0.00090231665,0.00066429185,0.00016685626,0.00001371308,0.00012973238,0.00042677936,0.00033720594],"category_scores_gemma":[0.003650999,0.00013112587,0.00024049236,0.00029413027,0.0007120637,0.0002087586,0.000091323825,0.0018760603,0.000039991348],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00075429375,0.00076750055,0.97957367,0.000015614041,0.00010384362,0.00068465614,0.00007942348,0.000019234247,0.010831802,0.000101943195,0.00097013084,0.0060979],"study_design_scores_gemma":[0.0053031296,0.0063001947,0.945678,0.000064919805,0.000042932414,0.0014005904,0.000012020829,0.00002953242,0.0002623749,0.00025281793,0.04054087,0.000112614885],"about_ca_topic_score_codex":0.00011070827,"about_ca_topic_score_gemma":0.00023244317,"teacher_disagreement_score":0.039570738,"about_ca_system_score_codex":0.000087617365,"about_ca_system_score_gemma":0.00038897293,"threshold_uncertainty_score":0.81506526},"labels":[],"label_agreement":null},{"id":"W1997343896","doi":"10.1016/j.jcv.2003.07.003","title":"Towards an in vitro model for acute hemorrhagic conjunctivitis: cytokine-mediated vascular endothelial cell activation triggered by enterovirus type 70 infection","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Viral Infections and Immunology Research","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Cytokine; Medicine; Umbilical vein; Tumor necrosis factor alpha; Immunology; Endothelial stem cell; Pathology; In vitro; Biology","score_opus":0.06055169316203936,"score_gpt":0.40133632194066937,"score_spread":0.34078462877863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1997343896","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9811391,0.00016881344,0.016906895,0.0004572784,0.00068407005,0.00039271024,0.000024817882,0.000015445554,0.00021083791],"genre_scores_gemma":[0.9965343,0.0011105932,0.0008323395,0.001077189,0.00021572335,0.000018986224,0.000041701023,0.000026873708,0.00014228444],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973843,0.00061910006,0.001206238,0.00025151405,0.00020454319,0.00033429722],"domain_scores_gemma":[0.99822706,0.00051240204,0.000500351,0.00020952318,0.00038899336,0.0001616777],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019157318,0.00016721281,0.0008987358,0.00032909962,0.00006195265,0.000014762654,0.00009258273,0.000505148,0.00006577125],"category_scores_gemma":[0.0024996335,0.00013533105,0.00035059627,0.00023825129,0.00015734891,0.00028366997,0.000019430641,0.0010666458,0.000012871409],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.014840712,0.0026649365,0.008818779,0.000024480882,0.00050023413,0.000036862166,0.000054529522,0.0001457735,0.9655443,0.00002570211,0.00057735643,0.0067663416],"study_design_scores_gemma":[0.12753716,0.07772205,0.06021345,0.000116357136,0.0023680842,0.0011720674,0.00014453476,0.11219264,0.56335765,0.0032765653,0.05092416,0.0009752883],"about_ca_topic_score_codex":0.000037589318,"about_ca_topic_score_gemma":0.000006797882,"teacher_disagreement_score":0.40218663,"about_ca_system_score_codex":0.00009069602,"about_ca_system_score_gemma":0.0005069799,"threshold_uncertainty_score":0.551864},"labels":[],"label_agreement":null},{"id":"W1998831372","doi":"10.1016/j.jcv.2007.08.004","title":"Diagnosis and epidemiological studies of human metapneumovirus using real-time PCR","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Respiratory viral infections research","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of Alberta; Stollery Children's Hospital; Provincial Laboratory of Public Health","funders":"","keywords":"Human metapneumovirus; Metapneumovirus; Epidemiology; Outbreak; Etiology; Medicine; Virology; Respiratory system; Respiratory tract infections; Pediatrics; Internal medicine","score_opus":0.5293628795552028,"score_gpt":0.6110702588661312,"score_spread":0.08170737931092842,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998831372","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99668914,0.0016525012,0.00008574243,0.00080019614,0.00018440674,0.00013787304,0.0000010928918,0.000007736222,0.0004413362],"genre_scores_gemma":[0.99274284,0.0038533953,0.0019872452,0.0007255946,0.0006234016,0.0000015719028,2.527772e-7,0.000012133906,0.000053553595],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99555045,0.0010221573,0.002656856,0.00019647735,0.00028191632,0.0002921558],"domain_scores_gemma":[0.98978126,0.008157059,0.001065764,0.00020567076,0.00049262546,0.00029760713],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.013728436,0.00013253586,0.0017600637,0.0003078473,0.0000785295,0.000003883673,0.00011383649,0.00032573627,0.00015345302],"category_scores_gemma":[0.018225743,0.000084715495,0.0003789156,0.00018758289,0.0011547387,0.000085615095,0.000121637466,0.0008743395,0.000009256833],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001222672,0.00061121857,0.8679452,0.00005342662,0.0007605842,0.00047260794,0.000033631764,0.00001284157,0.116300754,0.0002520027,0.0006115769,0.011723485],"study_design_scores_gemma":[0.0020629347,0.009802118,0.98055375,0.00007954584,0.0003963638,0.00045658767,0.00006804104,0.00004840686,0.0032786173,0.0015489116,0.0016192117,0.00008551373],"about_ca_topic_score_codex":0.000021764274,"about_ca_topic_score_gemma":0.0000077697105,"teacher_disagreement_score":0.11302214,"about_ca_system_score_codex":0.000042859887,"about_ca_system_score_gemma":0.00008552713,"threshold_uncertainty_score":0.9900442},"labels":[],"label_agreement":null},{"id":"W2001107446","doi":"10.1016/j.jcv.2013.06.024","title":"Analysis of HHV-6 mutations in solid organ transplant recipients at the onset of cytomegalovirus disease and following treatment with intravenous ganciclovir or oral valganciclovir","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Valganciclovir; Ganciclovir; Human cytomegalovirus; Virology; Cytomegalovirus; Drug resistance; Biology; Betaherpesvirinae; Cidofovir; Herpesviridae; Mutation; Medicine; Immunology; Virus; Gene; Viral disease; Genetics","score_opus":0.05752088766192312,"score_gpt":0.3990799794080574,"score_spread":0.3415590917461343,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2001107446","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997289,0.0004333885,0.00008692723,0.0015309728,0.00008405684,0.00045896336,0.000070883594,0.000004071345,0.00004172235],"genre_scores_gemma":[0.9980556,0.001092572,0.00022975788,0.00030821442,0.000065009226,0.000014892641,0.00001698895,0.00002171205,0.0001953008],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99649125,0.00046246639,0.0018959227,0.00027271282,0.00051750673,0.00036015233],"domain_scores_gemma":[0.9964467,0.0017430775,0.0007446599,0.0003577001,0.00025445138,0.00045336602],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013633497,0.0002080282,0.0017019545,0.0005995266,0.000071668015,0.000013488055,0.00018096651,0.00016970266,0.00052917027],"category_scores_gemma":[0.0005552354,0.000106332045,0.00054727274,0.00084906956,0.00054498157,0.000116051284,0.00004553902,0.00047263235,0.000010104485],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0163649,0.0017704908,0.9531532,0.000036426176,0.0042140237,0.0010487045,0.00088117784,0.00020371005,0.0032008996,0.000005732592,0.000047705376,0.019073028],"study_design_scores_gemma":[0.006708163,0.0068754735,0.9801302,0.000099945864,0.0039254604,0.00015807379,0.00012873768,0.00097625883,0.0005622079,0.00005324991,0.00027681282,0.00010540883],"about_ca_topic_score_codex":0.00050442095,"about_ca_topic_score_gemma":0.002527263,"teacher_disagreement_score":0.026977006,"about_ca_system_score_codex":0.0001216578,"about_ca_system_score_gemma":0.0006361535,"threshold_uncertainty_score":0.57940435},"labels":[],"label_agreement":null},{"id":"W2002678689","doi":"10.1016/j.jcv.2013.03.011","title":"Variant influenza A (H1N1) virus infection in Canada","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Hospital for Sick Children; Ministry of Health and Long Term Care; University of Toronto; Public Health Agency of Canada","funders":"","keywords":"Virology; Virus; Influenza A virus; H1N1 influenza; Gene; Biology; Coronavirus disease 2019 (COVID-19); Medicine; Genetics; Internal medicine; Disease; Infectious disease (medical specialty)","score_opus":0.1541164741194428,"score_gpt":0.46575670336840175,"score_spread":0.31164022924895896,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2002678689","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946329,0.00038413552,0.00004520861,0.0029211733,0.00063929084,0.00021962955,0.0000016981301,0.0000048867146,0.0011510734],"genre_scores_gemma":[0.9855386,0.00129341,0.00031592904,0.012160669,0.0006084002,0.000010505322,3.2848004e-7,0.000013312222,0.00005881832],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9967374,0.00040220274,0.0018894373,0.00015438486,0.00043645702,0.00038010636],"domain_scores_gemma":[0.9972471,0.0012284949,0.00055929436,0.00019485956,0.00045947838,0.00031078927],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016812175,0.00012660598,0.00091112073,0.000212632,0.000035742938,0.000009519082,0.00012273918,0.00018062296,0.0006238261],"category_scores_gemma":[0.006594012,0.000090123125,0.00018228052,0.00019859939,0.00015249378,0.00015509305,0.00008555854,0.001387699,0.00010304977],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011355183,0.0002664016,0.9745345,0.000026512287,0.00022817236,0.000793191,0.000043300854,0.0001264702,0.0007692431,0.0000427487,0.0088410955,0.013192856],"study_design_scores_gemma":[0.0035963918,0.0012735514,0.9564843,0.00004237413,0.00004313761,0.00028613623,0.00002252073,0.00022278987,0.0000638109,0.00042624056,0.037467588,0.00007115662],"about_ca_topic_score_codex":0.70490193,"about_ca_topic_score_gemma":0.66045386,"teacher_disagreement_score":0.04444808,"about_ca_system_score_codex":0.00032007686,"about_ca_system_score_gemma":0.0025308991,"threshold_uncertainty_score":0.78941244},"labels":[],"label_agreement":null},{"id":"W2005022747","doi":"10.1016/j.jcv.2006.09.006","title":"Longitudinal evaluation of herpes simplex virus DNA load during episodes of herpes labialis","year":2006,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier universitaire de Québec","funders":"","keywords":"Herpes Labialis; Viral load; Herpes simplex virus; Virology; Viral shedding; HSL and HSV; Virus; Simplexvirus; Real-time polymerase chain reaction; Medicine; Herpesviridae; Immunology; Biology; Viral disease","score_opus":0.10238137482826472,"score_gpt":0.44010838711609723,"score_spread":0.33772701228783253,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2005022747","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968839,0.0006071529,0.00010059455,0.00049639604,0.0003994994,0.00016590324,0.000013379902,0.000007863236,0.0013253035],"genre_scores_gemma":[0.99834985,0.00024508202,0.0005677017,0.00007130604,0.0006608626,0.0000033054073,0.0000032294759,0.000015495514,0.00008316386],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9963034,0.00049751514,0.002157218,0.00017928166,0.0006560535,0.00020653312],"domain_scores_gemma":[0.996621,0.0006100275,0.0014328923,0.00023277101,0.0009879327,0.00011537575],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029066163,0.00014918821,0.0010442374,0.00016459243,0.000048979437,0.0000051290663,0.00009697026,0.00027544657,0.00055163424],"category_scores_gemma":[0.0014268176,0.000112387526,0.00049492647,0.00016604441,0.00029904043,0.00010939244,0.000034030803,0.00024526945,0.000012974158],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004635031,0.007856935,0.55247086,0.00015669456,0.0017922394,0.00020025884,0.00008915931,0.0007848179,0.008055931,0.00029616826,0.0008374166,0.42282447],"study_design_scores_gemma":[0.009135935,0.0018255727,0.9616979,0.000101054786,0.0012423875,0.00019505748,0.000018313438,0.00016476761,0.013470788,0.0018745651,0.01018699,0.00008671013],"about_ca_topic_score_codex":0.00043990056,"about_ca_topic_score_gemma":0.0003814503,"teacher_disagreement_score":0.42273778,"about_ca_system_score_codex":0.00009354259,"about_ca_system_score_gemma":0.0003836245,"threshold_uncertainty_score":0.6040008},"labels":[],"label_agreement":null},{"id":"W2005611917","doi":"10.1016/j.jcv.2005.03.009","title":"Genetic characterization of respiratory syncytial viruses isolated from consecutive acute respiratory infections in a HIV infected child","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Respiratory viral infections research","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Eastern Ontario","funders":"","keywords":"Virology; Biology; Virus; Respiratory system; Pneumovirus; Strain (injury); Genetic variation; Respiratory disease; Viral disease; Immunology; Gene; Paramyxoviridae; Medicine; Genetics; Lung; Internal medicine","score_opus":0.07488203619567706,"score_gpt":0.4304333466292466,"score_spread":0.3555513104335695,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2005611917","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963917,0.0002257266,0.0012666843,0.0007939478,0.0004464891,0.00042305654,0.000054696866,0.000029550343,0.00036810746],"genre_scores_gemma":[0.99366844,0.00021397829,0.00019730913,0.0042087254,0.0016333418,0.000013042342,0.000007056651,0.000038394406,0.000019736375],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9938504,0.0015924183,0.0034219392,0.00034695736,0.00043058844,0.0003576867],"domain_scores_gemma":[0.99588907,0.0010764892,0.0015437703,0.00041993294,0.0007532853,0.00031742727],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015303643,0.0002434434,0.001311434,0.0010663094,0.0000827009,0.000017322634,0.00021369937,0.0006759001,0.0005454955],"category_scores_gemma":[0.003254543,0.00021303042,0.0004102506,0.0007517073,0.0006077426,0.0003272586,0.000098339086,0.0019570775,0.0000932844],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0038960446,0.0017546257,0.7473013,0.000016195314,0.0006014118,0.0002631541,0.00009447289,0.00009739859,0.24096759,0.000032418964,0.00031743647,0.004657951],"study_design_scores_gemma":[0.0072912946,0.0066039297,0.9514696,0.0001447198,0.00027250554,0.00015336764,0.000009909527,0.00031284476,0.0054691304,0.000048314632,0.02806867,0.00015571286],"about_ca_topic_score_codex":0.000029378389,"about_ca_topic_score_gemma":0.00009714493,"teacher_disagreement_score":0.23549846,"about_ca_system_score_codex":0.00014902369,"about_ca_system_score_gemma":0.0009142561,"threshold_uncertainty_score":0.86871284},"labels":[],"label_agreement":null},{"id":"W2006822131","doi":"10.1016/s1386-6532(06)80005-3","title":"Assessing the impact of HBV NAT on window period reduction and residual risk","year":2006,"lang":"en","type":"review","venue":"Journal of Clinical Virology","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":115,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Window period; Residual risk; Medicine; Confidence interval; Incidence (geometry); Hepatitis B virus; Hepatitis C; Virology; Hepatitis B; Viremia; Risk assessment; Internal medicine; Immunology; Human immunodeficiency virus (HIV); Antibody; Virus; Mathematics; Serology","score_opus":0.20035621118328079,"score_gpt":0.5544130251870301,"score_spread":0.3540568140037493,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2006822131","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14747685,0.85053337,0.0000065627387,0.00053142704,0.00070940045,0.00028990628,0.000018620487,0.000005088211,0.000428796],"genre_scores_gemma":[0.031055149,0.9656674,0.0001847019,0.000055353874,0.0029324396,0.0000029032358,0.0000049822183,0.0000330187,0.00006400955],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9941389,0.0019468518,0.0030581807,0.00024664102,0.00036794879,0.00024150101],"domain_scores_gemma":[0.99206114,0.0029289937,0.004310665,0.0003078786,0.00025782257,0.00013347511],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0040961634,0.00030374364,0.004035364,0.0002291574,0.00011293822,0.000023286253,0.00016249895,0.0006666822,0.000030859086],"category_scores_gemma":[0.006162414,0.00014679835,0.0014233082,0.00014683045,0.0007070177,0.00008475054,0.000059023303,0.0027284117,0.000009026259],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039027477,0.00041065228,0.027041638,0.0009701374,0.001921685,0.00020309564,0.000061878236,0.000006274966,0.0000044644744,0.000010555829,0.005823141,0.9631562],"study_design_scores_gemma":[0.0025989462,0.01184614,0.55650944,0.008886641,0.0077785454,0.005709493,0.00004401321,0.0000059090676,0.0000013263796,0.0002713357,0.40608728,0.00026096244],"about_ca_topic_score_codex":0.00015064578,"about_ca_topic_score_gemma":0.000023219853,"teacher_disagreement_score":0.9628952,"about_ca_system_score_codex":0.00010114459,"about_ca_system_score_gemma":0.0008261696,"threshold_uncertainty_score":0.99957234},"labels":[],"label_agreement":null},{"id":"W2008349148","doi":"10.1016/j.jcv.2004.12.012","title":"Comprehensive comparison of the VERSANT® HIV-1 RNA 3.0 (bDNA) and COBAS AMPLICOR HIV-1 MONITOR® 1.5 assays on 1000 clinical specimens","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; AIDS Vancouver","funders":"","keywords":"BDNA test; Viral load; Concordance; Virology; Population; Human immunodeficiency virus (HIV); Viremia; Biology; Lentivirus; Virus; Immunology; Molecular biology; Viral disease; Medicine; Bioinformatics","score_opus":0.10014301702060827,"score_gpt":0.42712913789220963,"score_spread":0.3269861208716014,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2008349148","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9852625,0.0020562646,0.00005666719,0.008929302,0.0015045404,0.00023468751,0.000097801625,0.000009875479,0.0018483346],"genre_scores_gemma":[0.99666494,0.0009805098,0.00026072303,0.00080277113,0.0006018249,0.0000026680214,0.000014282318,0.00001687418,0.00065542274],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9945394,0.0021414668,0.002355044,0.0003341092,0.00016655344,0.00046341948],"domain_scores_gemma":[0.992169,0.0056003747,0.0013526515,0.00044949848,0.00025990512,0.00016853564],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0014309761,0.00024193079,0.0014743576,0.00011366298,0.00016279065,0.000011334544,0.0005141926,0.00063377194,0.00052343955],"category_scores_gemma":[0.00079812476,0.00014855579,0.00062697637,0.00009392795,0.0016396214,0.00006891609,0.00021823088,0.002046399,0.0010407093],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0109358905,0.0053381566,0.76719713,0.000021321097,0.0024184575,0.000084945845,0.00024554072,0.00010703251,0.013801912,0.00071325945,0.12366642,0.075469926],"study_design_scores_gemma":[0.009635838,0.0054360353,0.69287306,0.0000471719,0.00021126612,0.00015327707,0.00017251547,0.000020158674,0.0033811373,0.000090219946,0.2878468,0.00013252597],"about_ca_topic_score_codex":0.000007554173,"about_ca_topic_score_gemma":0.000016699045,"teacher_disagreement_score":0.16418038,"about_ca_system_score_codex":0.00004424043,"about_ca_system_score_gemma":0.00018233001,"threshold_uncertainty_score":0.9997371},"labels":[],"label_agreement":null},{"id":"W2008459658","doi":"10.1016/j.jcv.2008.01.013","title":"Comparison of a commercial qualitative real-time RT-PCR kit with direct immunofluorescence assay (DFA) and cell culture for detection of influenza A and B in children","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Respiratory viral infections research","field":"Medicine","cited_by":47,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Public Health; University of Toronto; Hospital for Sick Children; SickKids Foundation","funders":"","keywords":"Gold standard (test); Virology; Biology; Real-time polymerase chain reaction; Immunofluorescence; Virus; Microbiology; Medicine; Immunology; Antibody; Gene; Internal medicine; Genetics","score_opus":0.14488742437532512,"score_gpt":0.5145381323533891,"score_spread":0.369650707978064,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2008459658","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986477,0.00052772724,0.00018393205,0.0000991712,0.000030086097,0.0003498056,0.000007805334,0.0000033749345,0.00015042568],"genre_scores_gemma":[0.99838555,0.00037356207,0.0010037741,0.00011133733,0.00008798442,0.0000058249952,9.784734e-7,0.000010482137,0.000020493932],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997124,0.0009540966,0.0013746957,0.00015616506,0.00023470589,0.00015630662],"domain_scores_gemma":[0.9968067,0.0016530858,0.00089178525,0.00012581784,0.00040767255,0.000114934235],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002432592,0.00011102124,0.0010920761,0.00022046792,0.000050860403,0.0000035561898,0.00007573306,0.0002477418,0.0000082747665],"category_scores_gemma":[0.0019145728,0.00007686243,0.0001170583,0.00019007493,0.0007555794,0.00010016078,0.000035120378,0.0006809885,6.845265e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011632442,0.0007194018,0.87666476,0.000057742564,0.00016258747,0.000008232605,0.0014784584,0.000018317398,0.1068032,0.0000040006926,0.00012890276,0.002321968],"study_design_scores_gemma":[0.00660209,0.015766209,0.9611855,0.000084875166,0.00010273269,0.0001575899,0.00018645273,0.0001684414,0.015399936,0.000032883316,0.00024448748,0.000068794434],"about_ca_topic_score_codex":0.00009582263,"about_ca_topic_score_gemma":0.000043649095,"teacher_disagreement_score":0.09140326,"about_ca_system_score_codex":0.000024621906,"about_ca_system_score_gemma":0.00015178275,"threshold_uncertainty_score":0.31343588},"labels":[],"label_agreement":null},{"id":"W2008548282","doi":"10.1016/j.jcv.2013.06.009","title":"Chronic norovirus infection in a transplant patient successfully treated with enterally administered immune globulin","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hamilton Regional Laboratory Medicine Program; St. Joseph’s Healthcare Hamilton; McMaster University","funders":"","keywords":"Norovirus; Medicine; Immune system; Immunology; Chronic infection; Disease; Intensive care medicine; Virus; Internal medicine","score_opus":0.036031928389537296,"score_gpt":0.3666615388792098,"score_spread":0.33062961048967254,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2008548282","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993115,0.00031798257,0.00024033038,0.00557525,0.000196356,0.0003485325,0.0000047463313,0.000009924046,0.00019185035],"genre_scores_gemma":[0.99643445,0.0015526961,0.0003486558,0.0012002656,0.00036339875,0.000018939318,0.000011481235,0.000015610049,0.000054500215],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9961356,0.0007811509,0.0021443246,0.00022489692,0.00022760885,0.00048643185],"domain_scores_gemma":[0.9983584,0.00020981258,0.0006583791,0.00018513748,0.0002139581,0.0003742598],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00087628845,0.00017245747,0.0011908527,0.00021929816,0.000024995046,0.0000129156415,0.00013012203,0.00024675214,0.00053776323],"category_scores_gemma":[0.00056903897,0.00011119311,0.0003037373,0.00012786654,0.0002484518,0.00016124202,0.000030963867,0.0010410565,0.00005883327],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010512636,0.0006704665,0.9537451,0.000042323416,0.00019890428,0.0013326652,0.000029337167,0.00004382886,0.0038251076,0.000003918537,0.00029038897,0.02930528],"study_design_scores_gemma":[0.008903755,0.046670344,0.9394799,0.00022900423,0.000060439885,0.00227124,0.0000074922914,0.00025693423,0.000106687745,0.00003603156,0.0019040273,0.00007413651],"about_ca_topic_score_codex":0.00070126174,"about_ca_topic_score_gemma":0.00086792686,"teacher_disagreement_score":0.045999877,"about_ca_system_score_codex":0.000104001345,"about_ca_system_score_gemma":0.0002581867,"threshold_uncertainty_score":0.588813},"labels":[],"label_agreement":null},{"id":"W2009457721","doi":"10.1016/j.jcv.2009.05.031","title":"Multiplex PCR tests sentinel the appearance of pandemic influenza viruses including H1N1 swine influenza","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; BC Centre for Disease Control; McMaster University; University of Guelph; St. Joseph’s Healthcare Hamilton","funders":"Canadian Institutes of Health Research","keywords":"Virology; Pandemic; Multiplex; Pandemic influenza; Biology; Medicine; Coronavirus disease 2019 (COVID-19); Infectious disease (medical specialty); Pathology; Genetics","score_opus":0.4233059271816087,"score_gpt":0.5529402071100432,"score_spread":0.12963427992843451,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2009457721","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9900752,0.005296828,0.000075375094,0.003341138,0.00029175903,0.00031966734,0.0000045646666,0.000028500765,0.000566992],"genre_scores_gemma":[0.96361893,0.00117052,0.0005173883,0.033309326,0.0013184759,0.0000038027902,3.1440914e-7,0.000023545876,0.00003771101],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9940824,0.00063563004,0.0034932299,0.0003044977,0.0008730905,0.00061116257],"domain_scores_gemma":[0.9931741,0.0030668622,0.0019363792,0.00055393286,0.00096515886,0.000303577],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.005237503,0.00029343172,0.0017434596,0.00028747862,0.00016703313,0.000016366497,0.0005695896,0.00037740785,0.000054980683],"category_scores_gemma":[0.021991938,0.00017563344,0.0006745537,0.0004171324,0.00096667465,0.00021115373,0.00024452264,0.0021188394,0.000047314083],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006517288,0.0006783528,0.93913734,0.00007094031,0.0005602943,0.00014046366,0.0002914702,0.00024992702,0.036449045,0.0000900668,0.0015958945,0.014218905],"study_design_scores_gemma":[0.008070727,0.0022999346,0.9466872,0.00027464452,0.00022716413,0.00024802878,0.00007278526,0.00021608008,0.0007253011,0.000720693,0.040311076,0.00014631463],"about_ca_topic_score_codex":0.000020142897,"about_ca_topic_score_gemma":0.000010910397,"teacher_disagreement_score":0.038715184,"about_ca_system_score_codex":0.000055136272,"about_ca_system_score_gemma":0.0003704208,"threshold_uncertainty_score":0.9862462},"labels":[],"label_agreement":null},{"id":"W2011134834","doi":"10.1016/j.jcv.2011.09.018","title":"CD4 T cell nadir independently predicts the magnitude of the HIV reservoir after prolonged suppressive antiretroviral therapy","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":107,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal; Royal Victoria Hospital; McGill University Health Centre; Royal Victoria Regional Health Centre","funders":"Canadian Institutes of Health Research; Styrelsen för Internationellt Utvecklingssamarbete","keywords":"Viremia; Nadir; Viral load; CD8; Antiretroviral therapy; Immunology; T cell; Biology; Virology; Human immunodeficiency virus (HIV); Internal medicine; Medicine; Immune system","score_opus":0.05564844371068169,"score_gpt":0.32282156344054935,"score_spread":0.2671731197298677,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2011134834","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99287707,0.003178215,0.000009494297,0.0013751487,0.00093769724,0.00036561876,0.0000764996,0.0000061195497,0.00117412],"genre_scores_gemma":[0.99729425,0.000690501,0.00007588703,0.00054538937,0.00014253888,0.000018717974,0.0000061220676,0.000015258415,0.0012113276],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9956066,0.0023490458,0.0012187678,0.00021789734,0.00015787307,0.00044979824],"domain_scores_gemma":[0.9972522,0.0009046289,0.00096349337,0.0005235079,0.0002799943,0.00007612058],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0017773998,0.00018318459,0.00062864064,0.000081905695,0.00012744419,0.000007842711,0.0010174412,0.00048176615,0.0012196634],"category_scores_gemma":[0.00067297893,0.00008206232,0.0005222749,0.000103866674,0.0012808578,0.00009776043,0.00024109457,0.0016014646,0.00024208172],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.015789958,0.0019928305,0.95455885,0.000014697037,0.001102783,0.00024264304,0.0011496053,0.0000024431693,0.013222114,0.000031100448,0.007716345,0.004176658],"study_design_scores_gemma":[0.0067161024,0.0064943032,0.954824,0.00002234847,0.00011820776,0.00018659982,0.000094817595,0.0000010279994,0.019347435,0.0004814348,0.011628368,0.0000854094],"about_ca_topic_score_codex":0.00004450784,"about_ca_topic_score_gemma":0.000052159863,"teacher_disagreement_score":0.009073856,"about_ca_system_score_codex":0.000015830263,"about_ca_system_score_gemma":0.00030804228,"threshold_uncertainty_score":0.99969333},"labels":[],"label_agreement":null},{"id":"W2016863019","doi":"10.1016/s1386-6532(01)00238-4","title":"Cytomegalovirus glycoprotein B genotype does not correlate with outcomes in liver transplant patients","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":50,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University Health Network; Mount Sinai Hospital; University of Toronto","funders":"","keywords":"Genotype; Human cytomegalovirus; Cytomegalovirus; Betaherpesvirinae; Viral load; Immunology; Virology; Liver disease; Polymerase chain reaction; Liver transplantation; Biology; Medicine; Viral disease; Herpesviridae; Transplantation; Gastroenterology; Internal medicine; Virus; Gene; Genetics","score_opus":0.05964875105806928,"score_gpt":0.3514156494420669,"score_spread":0.2917668983839976,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2016863019","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99552405,0.00025119123,0.00005265779,0.0025494825,0.000372308,0.00034159675,0.000018352866,0.00001083261,0.00087953085],"genre_scores_gemma":[0.994389,0.0016110922,0.00047146564,0.0021639294,0.0002629246,0.000005108953,0.0000020354837,0.000030954183,0.001063465],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9965177,0.00029964655,0.0017714442,0.00028415924,0.00065613503,0.00047088493],"domain_scores_gemma":[0.997706,0.00080945913,0.00055102695,0.00027582885,0.00026048263,0.00039718274],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0012330391,0.00021883471,0.0013524994,0.0003606335,0.000047583086,0.000017150414,0.0002431958,0.00039252342,0.0014958824],"category_scores_gemma":[0.0005734135,0.00011829083,0.00035342664,0.00020439088,0.000302312,0.00014920888,0.000040810133,0.001750773,0.00026773004],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.013023314,0.002117259,0.9473131,0.000040596926,0.0002971265,0.0026453473,0.00022350527,0.000011382308,0.00046473357,0.000036379963,0.0002743222,0.033552967],"study_design_scores_gemma":[0.014147697,0.006587472,0.9653799,0.000092882234,0.00014437259,0.00020964308,0.000010491012,0.0004714556,0.00017880683,0.000047530488,0.012568245,0.00016150376],"about_ca_topic_score_codex":0.00010118728,"about_ca_topic_score_gemma":0.0003069517,"teacher_disagreement_score":0.033391465,"about_ca_system_score_codex":0.00006417198,"about_ca_system_score_gemma":0.00011691942,"threshold_uncertainty_score":0.9994169},"labels":[],"label_agreement":null},{"id":"W2018566719","doi":"10.1016/s1386-6532(06)80304-5","title":"P.124 HBV immunization, post-immunization serology and immunity among healthcare workers in Canada","year":2006,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Immunization; Serology; Medicine; Immunity; Virology; Health care; Immunology; Antibody; Immune system; Political science","score_opus":0.027777629519631107,"score_gpt":0.3430520812594863,"score_spread":0.3152744517398552,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2018566719","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9824853,0.0016388025,0.00006858429,0.0149104055,0.0005514842,0.0001568418,0.0000054128654,0.000007003342,0.00017618785],"genre_scores_gemma":[0.9945426,0.0014532941,0.00035755918,0.0033114487,0.00024046989,0.000002221386,0.000018128738,0.000018715624,0.000055567438],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9965048,0.0008732397,0.0019528298,0.0001525904,0.00021681184,0.00029973083],"domain_scores_gemma":[0.9972238,0.000980146,0.00081881415,0.00022757931,0.00060355186,0.00014612559],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013590119,0.00014533539,0.0009514977,0.00017977235,0.00009463433,0.0000062791873,0.0001384798,0.00026871855,0.000050904637],"category_scores_gemma":[0.002186883,0.00012538649,0.00006332338,0.00024998002,0.00029396854,0.00010603738,0.000096428106,0.0011092954,0.0000022869228],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005803251,0.00011655556,0.99547476,0.00002622365,0.00007492413,0.00017127706,0.000071041686,0.000108289736,0.00011549554,0.00006097494,0.00081332837,0.0023868226],"study_design_scores_gemma":[0.002141,0.0011043558,0.99468875,0.00007257148,0.00006141615,0.00016232989,0.00020321379,0.00013404246,0.000012036931,0.0002516995,0.0010850847,0.00008348773],"about_ca_topic_score_codex":0.858625,"about_ca_topic_score_gemma":0.97002876,"teacher_disagreement_score":0.11140372,"about_ca_system_score_codex":0.00021346484,"about_ca_system_score_gemma":0.0016630302,"threshold_uncertainty_score":0.5113113},"labels":[],"label_agreement":null},{"id":"W2018720593","doi":"10.1016/s1386-6532(07)70013-6","title":"Value of RVP in clinical settings: intensive care","year":2007,"lang":"en","type":"review","venue":"Journal of Clinical Virology","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Value (mathematics); Intensive care medicine; Medicine; Mathematics; Statistics","score_opus":0.21795053892943114,"score_gpt":0.5715849140864774,"score_spread":0.3536343751570462,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2018720593","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.011161494,0.9828567,0.000035713867,0.00080471457,0.0038499648,0.00043534744,0.000013136684,0.000008965528,0.0008339889],"genre_scores_gemma":[0.0009916864,0.9909833,0.00016025767,0.005207964,0.0025556667,0.0000029888313,0.000006673491,0.00004215671,0.00004929724],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9880968,0.0016492464,0.009222446,0.0003443633,0.00034207513,0.000345118],"domain_scores_gemma":[0.98645,0.0061576995,0.0050712037,0.0004256572,0.0014969171,0.00039849442],"candidate_categories":["metaresearch","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.0058279,0.00033264174,0.007238817,0.00069354783,0.000025465055,0.0000040481727,0.00031106273,0.0021767484,0.000061820436],"category_scores_gemma":[0.018961873,0.00021767242,0.0036372936,0.000366516,0.0006565479,0.00004235301,0.000111586814,0.005319255,0.000044856115],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003201195,0.0005432175,0.022454944,0.004843445,0.0008692125,0.0017240815,0.0000748043,0.0000018070282,0.0000017833044,0.000052981646,0.0014745014,0.9676391],"study_design_scores_gemma":[0.0021083222,0.004876313,0.014073829,0.00959911,0.0024353103,0.0022576158,0.0001724316,0.0000014941298,3.3992583e-7,0.000038979044,0.96428823,0.00014803211],"about_ca_topic_score_codex":0.0000030789206,"about_ca_topic_score_gemma":0.000007889915,"teacher_disagreement_score":0.9674911,"about_ca_system_score_codex":0.000084196,"about_ca_system_score_gemma":0.0018260982,"threshold_uncertainty_score":0.9991186},"labels":[],"label_agreement":null},{"id":"W2019376126","doi":"10.1016/s1386-6532(01)00217-7","title":"Fulminant disseminated Varicella Zoster virus infection without skin involvement","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":52,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Viremia; Fulminant; Pathology; Pathognomonic; Varicella zoster virus; Medicine; Bone marrow; Virus; Virology; Immunology; Disease","score_opus":0.08508489994562371,"score_gpt":0.40702520608403026,"score_spread":0.3219403061384065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2019376126","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930303,0.00023014715,0.0005611772,0.0009105695,0.0011728822,0.00015823568,0.0000018433387,0.000016776154,0.003918034],"genre_scores_gemma":[0.994599,0.00177529,0.00041793755,0.0012177004,0.00060972484,0.0000050006706,0.0000021467667,0.000018754621,0.0013544859],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977355,0.00024301054,0.0013768891,0.00018592828,0.00022483025,0.00023386537],"domain_scores_gemma":[0.9983494,0.00032111767,0.00065336685,0.00021730983,0.00019150163,0.0002672676],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00087124394,0.00015560372,0.000721968,0.00017983705,0.00006797713,0.000012358749,0.00006116044,0.00029201244,0.0015582572],"category_scores_gemma":[0.00038800086,0.00010547921,0.0003844917,0.00016338644,0.00012584482,0.000087543915,0.000033607845,0.0006388807,0.00028059207],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009927385,0.006195733,0.7651096,0.000030776617,0.000918721,0.00071254757,0.00014586958,0.000014171263,0.0010019746,0.00004092903,0.005282264,0.21955469],"study_design_scores_gemma":[0.006836124,0.007158995,0.6780814,0.00010505416,0.0008210429,0.0009321997,0.00001429146,0.0004972245,0.0011272625,0.00017115251,0.30409858,0.00015664447],"about_ca_topic_score_codex":0.00006511462,"about_ca_topic_score_gemma":0.00005497288,"teacher_disagreement_score":0.29881632,"about_ca_system_score_codex":0.00006646398,"about_ca_system_score_gemma":0.00004348456,"threshold_uncertainty_score":0.9993545},"labels":[],"label_agreement":null},{"id":"W2020154586","doi":"10.1016/j.jcv.2009.01.010","title":"Influenza virus shedding—Excretion patterns and effects of antiviral treatment","year":2009,"lang":"en","type":"review","venue":"Journal of Clinical Virology","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; University of Manitoba","funders":"","keywords":"Viral shedding; Excretion; Virus; Virology; Influenza A virus; Microbiology; Biology; Medicine; Internal medicine","score_opus":0.22297562420403877,"score_gpt":0.5501658531057599,"score_spread":0.32719022890172117,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020154586","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.032596372,0.96595573,0.00002388849,0.000106252315,0.00042514584,0.0007119418,0.000020618596,0.000008666933,0.00015136371],"genre_scores_gemma":[0.0010287564,0.9969533,0.00021381144,0.0006435773,0.0010620808,0.000010668536,0.0000047232697,0.000034170786,0.000048918046],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.994223,0.0011493665,0.003418818,0.0003364608,0.00047464576,0.00039773143],"domain_scores_gemma":[0.99253625,0.0039945804,0.0025730429,0.00033754067,0.00028210913,0.00027646046],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0017284225,0.00044731333,0.0064229313,0.00048190504,0.0000475578,0.000011461729,0.00019089802,0.0008267941,0.000024414336],"category_scores_gemma":[0.0037801596,0.00027037485,0.0015353971,0.00015249422,0.00043508378,0.000083678395,0.00011376587,0.001382009,0.000017500557],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008764942,0.0006576387,0.004331685,0.0070505766,0.0017231825,0.00064676674,0.00003821085,1.7034691e-7,0.00001562174,0.00001852774,0.00019737185,0.9844437],"study_design_scores_gemma":[0.0050056404,0.021530354,0.024837732,0.011155539,0.004569834,0.00040435803,0.000004584777,0.0000026969733,0.000026828298,0.00006676841,0.93219715,0.00019850732],"about_ca_topic_score_codex":0.000016907943,"about_ca_topic_score_gemma":0.000005789965,"teacher_disagreement_score":0.98424524,"about_ca_system_score_codex":0.00012625555,"about_ca_system_score_gemma":0.0004977139,"threshold_uncertainty_score":0.99997485},"labels":[],"label_agreement":null},{"id":"W2024630988","doi":"10.1016/j.jcv.2014.06.006","title":"Chronic hepatitis B infection and risk of preterm labor: A meta-analysis of observational studies","year":2014,"lang":"en","type":"review","venue":"Journal of Clinical Virology","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute","funders":"","keywords":"Medicine; Observational study; Meta-analysis; Odds ratio; Confidence interval; Cohort study; Epidemiology; Case-control study; Obstetrics; Internal medicine","score_opus":0.4550111306155251,"score_gpt":0.5396682157694863,"score_spread":0.0846570851539612,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024630988","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.029044237,0.9697525,0.00008096501,0.00025611697,0.00036048144,0.0002983121,0.00017206732,0.000004552806,0.000030750914],"genre_scores_gemma":[0.0047499696,0.993756,0.00061909255,0.00013711635,0.0006240711,0.00001955479,0.00001547883,0.000023203731,0.000055528122],"study_design_codex":"meta_analysis","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9912823,0.0020529008,0.005701392,0.0003015379,0.00047613095,0.00018574936],"domain_scores_gemma":[0.98090464,0.008369778,0.009005021,0.0003643005,0.0012314026,0.00012488553],"candidate_categories":["metaresearch","metaepi_broad"],"consensus_categories":[],"category_scores_codex":[0.004877275,0.00033789824,0.016379977,0.0006681407,0.00004210948,0.000003680774,0.00013860714,0.0005449164,0.00014383884],"category_scores_gemma":[0.013406692,0.00020831947,0.005637591,0.0005601469,0.00069808675,0.00006800654,0.00014264569,0.0010282815,0.000003120914],"study_design_candidate":"meta_analysis","study_design_consensus":"meta_analysis","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000069470734,0.00012882691,0.38128924,0.0057556783,0.5080189,0.000015613514,0.00003999256,0.000009378939,2.7820664e-7,0.00007143714,0.00029087064,0.10431028],"study_design_scores_gemma":[0.000451378,0.0023263302,0.22785603,0.00055415457,0.5435537,0.000036505917,7.1061845e-7,0.000020772992,2.94526e-7,0.00009034951,0.22502317,0.0000865887],"about_ca_topic_score_codex":0.00024241138,"about_ca_topic_score_gemma":0.0028219095,"teacher_disagreement_score":0.2247323,"about_ca_system_score_codex":0.00007898089,"about_ca_system_score_gemma":0.0005170826,"threshold_uncertainty_score":0.9982229},"labels":[],"label_agreement":null},{"id":"W2024833332","doi":"10.1016/j.jcv.2004.12.014","title":"Multiplex real time RT-PCR for the detection and quantitation of norovirus genogroups I and II in patients with acute gastroenteritis","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":118,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta Hospital; Provincial Laboratory of Public Health","funders":"","keywords":"Norovirus; TaqMan; Real-time polymerase chain reaction; Multiplex; Molecular biology; Virology; Biology; Polymerase chain reaction; Caliciviridae; Reverse transcription polymerase chain reaction; Acute gastroenteritis; Outbreak; Gene; Messenger RNA; Genetics","score_opus":0.034225726565783286,"score_gpt":0.3759817530827536,"score_spread":0.34175602651697035,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024833332","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959009,0.000106101696,0.0012431863,0.0024054502,0.000062149345,0.00026032803,0.000013007988,0.0000021968317,0.000006644063],"genre_scores_gemma":[0.99364513,0.0012984709,0.0044364696,0.0004071341,0.00018279631,0.0000037465447,0.0000041616267,0.0000080080845,0.000014098803],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99841255,0.00022666033,0.0009052516,0.00012398495,0.0001215265,0.0002100544],"domain_scores_gemma":[0.9988271,0.00038184383,0.0004262672,0.00007844612,0.00016270438,0.00012361797],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011250676,0.00007790067,0.0005486743,0.0000964452,0.00004327422,0.0000037316959,0.000056164463,0.00010121984,0.000011427078],"category_scores_gemma":[0.00090846646,0.0000476513,0.00008567893,0.00003873565,0.00029625854,0.00009816998,0.000040077444,0.00030241566,6.666456e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.029855438,0.0003690603,0.8770825,0.000021173355,0.00021023968,0.000014517575,0.000061194594,0.000018578772,0.0066000666,0.000004823387,0.0001047843,0.08565758],"study_design_scores_gemma":[0.0098295035,0.02533564,0.9619677,0.000033514752,0.000087237415,0.00015472146,0.000018969653,0.0020650467,0.00001972757,0.000024547446,0.00043738043,0.000025996796],"about_ca_topic_score_codex":0.00002876586,"about_ca_topic_score_gemma":0.0002592416,"teacher_disagreement_score":0.08563159,"about_ca_system_score_codex":0.00001612181,"about_ca_system_score_gemma":0.000025968526,"threshold_uncertainty_score":0.19431637},"labels":[],"label_agreement":null},{"id":"W2029225660","doi":"10.1016/s1386-6532(07)70009-4","title":"xTAG™ RVP assay: analytical and clinical performance","year":2007,"lang":"en","type":"review","venue":"Journal of Clinical Virology","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":85,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Luminex (Canada)","funders":"","keywords":"Clinical trial; Protocol (science); Medical physics; Medicine; Clinical study design; Clinical study; Computer science; Internal medicine; Pathology; Alternative medicine","score_opus":0.13350358977592608,"score_gpt":0.5162423549834063,"score_spread":0.38273876520748024,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2029225660","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008464344,0.98879254,0.0012358538,0.00012522326,0.00074550207,0.00016695069,0.000011508674,0.0000130388835,0.0004450456],"genre_scores_gemma":[0.0023031004,0.98938453,0.004101203,0.00059429335,0.0032533214,9.300902e-7,0.000028408142,0.00004239293,0.00029180478],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99321973,0.0011343918,0.0043792906,0.0005995278,0.00027170108,0.00039537245],"domain_scores_gemma":[0.9951225,0.0010080622,0.0026768052,0.00051710464,0.0002939311,0.000381584],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.008392384,0.00042926206,0.0034842847,0.00021733477,0.000060956627,0.000021726215,0.00046194703,0.0022694666,0.000006111404],"category_scores_gemma":[0.0029655949,0.00028780504,0.0020657147,0.00017923885,0.0008984274,0.0000067603487,0.00027377257,0.0018864155,0.000008334854],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021001008,0.00020845656,0.0014357808,0.00029401778,0.0008336753,0.00007583031,4.450116e-7,1.248651e-7,0.000005763435,0.000014673201,0.0017597637,0.9951615],"study_design_scores_gemma":[0.00047720133,0.0029779817,0.0007035968,0.0006247792,0.0018065937,0.00087715586,0.000002046182,0.000027394548,0.000014361137,0.000029487877,0.99215716,0.00030222704],"about_ca_topic_score_codex":5.553818e-7,"about_ca_topic_score_gemma":0.000003758606,"teacher_disagreement_score":0.9948592,"about_ca_system_score_codex":0.000016414966,"about_ca_system_score_gemma":0.00037674137,"threshold_uncertainty_score":0.9999574},"labels":[],"label_agreement":null},{"id":"W2029650805","doi":"10.1016/s1386-6532(02)00266-4","title":"Molecular characterization of rotavirus strains from children in Toronto, Canada","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Serotype; Rotavirus; Virology; Polymerase chain reaction; Biology; Reoviridae; Diarrhea; Acute gastroenteritis; Virus; Microbiology; Medicine; Genetics; Gene","score_opus":0.03306927478663469,"score_gpt":0.38509576666930617,"score_spread":0.3520264918826715,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2029650805","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99714893,0.0002254995,0.00037790404,0.0015551012,0.00025636345,0.00009884312,0.00002682114,0.0000012962989,0.0003092411],"genre_scores_gemma":[0.9963873,0.0005918454,0.0004775868,0.0023375524,0.00016468111,9.541725e-7,0.000020069783,0.000007792094,0.0000121858675],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9972466,0.0007359041,0.0014573517,0.00012556551,0.0001950177,0.00023953209],"domain_scores_gemma":[0.9989058,0.000103144484,0.00052333274,0.00013483469,0.00010318563,0.0002297247],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010449385,0.000081314676,0.00082845846,0.000040418337,0.000007764534,0.0000016249154,0.00010775427,0.00015635096,0.00045849284],"category_scores_gemma":[0.002863197,0.00006604771,0.00015172934,0.000042805605,0.000099702476,0.00005684385,0.000017755881,0.00046570043,0.0000011359045],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009623231,0.00029936084,0.91638017,0.0000060239686,0.00016478857,0.00040783756,0.000008866208,0.000009998632,0.07509089,0.00013108258,0.00020424882,0.0063343868],"study_design_scores_gemma":[0.0026432031,0.0017092095,0.9938362,0.000030777806,0.000027185395,0.00014007244,0.000012717657,0.000030074187,0.0005533106,0.00012512923,0.00085712096,0.00003497472],"about_ca_topic_score_codex":0.069131106,"about_ca_topic_score_gemma":0.15222667,"teacher_disagreement_score":0.083095565,"about_ca_system_score_codex":0.00009632609,"about_ca_system_score_gemma":0.0005615137,"threshold_uncertainty_score":0.9370676},"labels":[],"label_agreement":null},{"id":"W2032583643","doi":"10.1016/j.jcv.2004.09.012","title":"Antibodies reactive with C-terminus of the second conserved region of HIV-1gp120 as possible prognostic marker and therapeutic agent for HIV disease","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Blood Services; University of Toronto","funders":"Science and Engineering Research Board","keywords":"Antibody; Glycoprotein; Immunology; Virology; Peptide; Human immunodeficiency virus (HIV); Disease; Biology; Medicine; Internal medicine; Molecular biology; Biochemistry","score_opus":0.04669816761955387,"score_gpt":0.34723978612105094,"score_spread":0.3005416185014971,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2032583643","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99387354,0.0021260674,0.000087530665,0.003161441,0.0001590921,0.00040766352,0.00006958377,0.0000025462023,0.00011251429],"genre_scores_gemma":[0.99862766,0.0002461027,0.00009678134,0.00025973108,0.000027954795,0.000009562728,0.000007579098,0.000008976945,0.0007156767],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99840444,0.00044782815,0.0007165677,0.00015798776,0.000056549336,0.00021661948],"domain_scores_gemma":[0.99727255,0.001502097,0.0007647092,0.00018902229,0.00020868312,0.00006292463],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00050015305,0.00012175974,0.0005672899,0.00006263423,0.00006916048,0.0000039937986,0.00016441775,0.00015531061,0.00006307877],"category_scores_gemma":[0.0005818428,0.000063837724,0.00022743532,0.000048600297,0.0010800133,0.00004276577,0.000051337334,0.00032128472,0.0000086238515],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.03170883,0.001926189,0.94642156,0.00015855866,0.0025100939,0.00036259278,0.00036227104,0.000010355698,0.011419242,0.00046427123,0.000790939,0.0038651007],"study_design_scores_gemma":[0.010273948,0.0056496724,0.97111374,0.00015086656,0.00040843163,0.0007639552,0.00011163556,0.0000016597069,0.0056220805,0.0025252856,0.003299576,0.000079146426],"about_ca_topic_score_codex":0.000006312903,"about_ca_topic_score_gemma":0.000024221365,"teacher_disagreement_score":0.024692187,"about_ca_system_score_codex":0.000015410984,"about_ca_system_score_gemma":0.00041013167,"threshold_uncertainty_score":0.39793545},"labels":[],"label_agreement":null},{"id":"W2032943694","doi":"10.1016/s1386-6532(07)70014-8","title":"Respiratory virus panels for global surveillance of emerging infectious diseases","year":2007,"lang":"en","type":"review","venue":"Journal of Clinical Virology","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; Ministry of Health and Long Term Care","funders":"U.S. Department of Defense","keywords":"Outbreak; Influenza A virus subtype H5N1; Transmission (telecommunications); Infectious disease (medical specialty); Virology; Disease surveillance; Disease; Incubation period; Influenza A virus; Emerging infectious disease; Global health; Biology; Medicine; Environmental health; Virus; Public health","score_opus":0.39945525469762216,"score_gpt":0.6022239840604141,"score_spread":0.20276872936279194,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2032943694","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0014943919,0.9953934,0.0003252658,0.00008074449,0.0013094494,0.0007523128,0.0002001459,0.000015655542,0.00042861007],"genre_scores_gemma":[0.00029788824,0.99582535,0.00017258656,0.0008442552,0.0027560529,0.00001775368,0.0000060138836,0.000042011823,0.000038090257],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99234545,0.0010162898,0.005074623,0.0003514166,0.0006435621,0.0005686563],"domain_scores_gemma":[0.9866278,0.007523895,0.003876745,0.00042734313,0.0011134841,0.00043069347],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0057306644,0.00039149614,0.006567415,0.00034840376,0.00007067189,0.000007998099,0.00036891823,0.0007990862,0.00004856633],"category_scores_gemma":[0.02326188,0.00026807742,0.0028343075,0.0003714484,0.00070931896,0.00006012373,0.0001779865,0.0013785753,0.000015723903],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018222678,0.0005447722,0.017146837,0.009315778,0.002260687,0.00030335688,0.0000072782996,0.0000022760908,0.0000021953033,0.000099895005,0.001904479,0.96659017],"study_design_scores_gemma":[0.002870931,0.004226224,0.016260838,0.0024065697,0.0015169036,0.00021038923,0.0000048192715,0.0000012279074,6.4010044e-7,0.00022238854,0.9721052,0.0001738516],"about_ca_topic_score_codex":0.0000059972353,"about_ca_topic_score_gemma":0.000013327269,"teacher_disagreement_score":0.9702007,"about_ca_system_score_codex":0.00017977665,"about_ca_system_score_gemma":0.0016383106,"threshold_uncertainty_score":0.9999772},"labels":[],"label_agreement":null},{"id":"W2033013922","doi":"10.1016/j.jcv.2010.12.007","title":"Neuraminidase-inhibitor resistance testing for pandemic influenza A (H1N1) 2009 in Ontario, Canada","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Credit Valley Hospital; Hospital for Sick Children; University of Toronto; Toronto Public Health; Centre hospitalier universitaire de Québec","funders":"","keywords":"Oseltamivir; Zanamivir; Neuraminidase; Neuraminidase inhibitor; Virology; Medicine; Pandemic; Drug resistance; Influenza season; Influenza A virus; Resistance mutation; Biology; Virus; Microbiology; Internal medicine; Coronavirus disease 2019 (COVID-19); Gene; Polymerase chain reaction; Influenza vaccine; Genetics; Infectious disease (medical specialty)","score_opus":0.38160418903783944,"score_gpt":0.458409883190498,"score_spread":0.07680569415265859,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2033013922","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958421,0.0007580021,0.00002140979,0.000569742,0.00055237714,0.000318792,0.000007955441,0.000008241337,0.0019214028],"genre_scores_gemma":[0.9849208,0.000046069763,0.0058264025,0.007937378,0.0006262505,0.000016575432,6.9515204e-7,0.000024964489,0.00060087495],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99634683,0.00023673598,0.002241948,0.00024374695,0.00040016725,0.0005305742],"domain_scores_gemma":[0.99451697,0.0034722486,0.0008335547,0.0002333488,0.0006312157,0.0003126633],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0027770281,0.00017022202,0.0010919769,0.00015814787,0.00006218407,0.000005624594,0.0002227803,0.00023464057,0.00009719174],"category_scores_gemma":[0.018724639,0.00013120794,0.0002061869,0.00015895668,0.00023365651,0.00009434391,0.000071571405,0.001593068,0.000004057467],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007963287,0.0002465307,0.9791013,0.000048049737,0.000138117,0.000640563,0.00020250218,0.0000042930956,0.00047273803,0.000025177183,0.00879845,0.0023590191],"study_design_scores_gemma":[0.0058289925,0.0026777673,0.9266658,0.00015396813,0.000083679544,0.0000949619,0.00006078325,0.000019193967,0.00007689359,0.00047079206,0.06375999,0.00010717964],"about_ca_topic_score_codex":0.26170227,"about_ca_topic_score_gemma":0.95071983,"teacher_disagreement_score":0.68901753,"about_ca_system_score_codex":0.0003155307,"about_ca_system_score_gemma":0.003987847,"threshold_uncertainty_score":0.98954105},"labels":[],"label_agreement":null},{"id":"W2035986254","doi":"10.1016/j.jcv.2006.05.003","title":"Pathogenicity and response to topical antiviral therapy in a murine model of acyclovir-sensitive and acyclovir-resistant herpes simplex viruses isolated from the same patient","year":2006,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier universitaire de Québec; Université Laval","funders":"","keywords":"Thymidine kinase; Virology; Aciclovir; Herpes simplex virus; Virus; Virulence; Herpesviridae; Biology; Alphaherpesvirinae; Drug resistance; Simplexvirus; Microbiology; Viral disease; Gene","score_opus":0.048485090386629376,"score_gpt":0.3623686574777872,"score_spread":0.31388356709115783,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035986254","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99611217,0.00026252653,0.00024290668,0.0029517736,0.00007719138,0.00024982123,0.00006265871,0.000005479855,0.00003549048],"genre_scores_gemma":[0.9960546,0.0003888016,0.0009205588,0.0024824403,0.00012352882,0.0000029138978,0.0000017881077,0.000012362988,0.000012999819],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99745333,0.00073413335,0.0012221853,0.00022093115,0.00017630312,0.0001930857],"domain_scores_gemma":[0.9970338,0.0021247182,0.00039285436,0.00018523324,0.00014005095,0.00012334908],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00083519565,0.00015858811,0.0007864289,0.00009906527,0.000049322713,0.000010098511,0.000060709375,0.00020637772,0.0000141941755],"category_scores_gemma":[0.0008442763,0.00009487257,0.0001520421,0.00013295734,0.00026476305,0.000061693056,0.0000690436,0.0003693858,0.000001486217],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.1344118,0.0044293446,0.4480895,0.000010101891,0.0006911959,0.0008251697,0.0011090998,0.00023233496,0.08794167,0.00010710793,0.00030561537,0.32184705],"study_design_scores_gemma":[0.0066224243,0.005944619,0.9775721,0.000051365714,0.000112917056,0.000054219614,0.00007293529,0.0012275949,0.001466168,0.0009912704,0.0057876175,0.0000968048],"about_ca_topic_score_codex":0.00063717336,"about_ca_topic_score_gemma":0.00044494067,"teacher_disagreement_score":0.52948254,"about_ca_system_score_codex":0.000029533576,"about_ca_system_score_gemma":0.00012802349,"threshold_uncertainty_score":0.38687912},"labels":[],"label_agreement":null},{"id":"W2036253857","doi":"10.1016/j.jcv.2004.07.009","title":"Phylogenetic analyses of human rotavirus in central Taiwan in 1996, 2001 and 2002","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Chung Shan Medical University Hospital; University of British Columbia","keywords":"Phylogenetic tree; Rotavirus; Phylogenetics; Virology; Biology; Evolutionary biology; Geography; Genetics; Virus; Gene","score_opus":0.1897314008302014,"score_gpt":0.5089320370202245,"score_spread":0.3192006361900231,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036253857","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99500644,0.0010743722,0.000041204,0.0035242655,0.00009305104,0.00010172344,0.0000028787997,0.0000015495943,0.00015451101],"genre_scores_gemma":[0.99633664,0.0017342845,0.0008273716,0.0008403349,0.00023243231,0.0000012710029,0.0000013989875,0.000007659806,0.000018627958],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9966826,0.00055106444,0.0019485336,0.00017087658,0.00016177069,0.00048516784],"domain_scores_gemma":[0.99887276,0.00013435181,0.0004567028,0.00012967059,0.0000741892,0.000332326],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017988473,0.00010468374,0.0012213147,0.00031692153,0.000012103756,0.0000024445653,0.00012612394,0.00021069711,0.00014453764],"category_scores_gemma":[0.0023606925,0.00008059551,0.00019930788,0.00014198355,0.0004586718,0.000044028813,0.00005258294,0.0008497129,0.0000034332243],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018032852,0.0006872097,0.9542012,0.000025002762,0.000070476046,0.0009224872,0.000027532978,0.00024552434,0.038462434,0.000022810376,0.00019853942,0.0033334566],"study_design_scores_gemma":[0.007955529,0.007490255,0.9825867,0.00010077426,0.000035833044,0.00030645987,0.000030242674,0.000044053286,0.00018961614,0.0010606629,0.00015739886,0.00004251802],"about_ca_topic_score_codex":0.00032090014,"about_ca_topic_score_gemma":0.0011550448,"teacher_disagreement_score":0.03827282,"about_ca_system_score_codex":0.000045401946,"about_ca_system_score_gemma":0.00015089363,"threshold_uncertainty_score":0.36916268},"labels":[],"label_agreement":null},{"id":"W2036387540","doi":"10.1016/j.jcv.2008.06.019","title":"HCV quasispecies evolution during treatment with interferon alfa-2b and ribavirin in two children coinfected with HCV and HIV-1","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Hepatitis C virus research","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Viral quasispecies; Ribavirin; Hepatitis C virus; Virology; Viral load; Interferon; Hepatitis C; Alpha interferon; Medicine; Virus; Hepacivirus; Immunology; Biology","score_opus":0.04931484039074471,"score_gpt":0.3925587182055507,"score_spread":0.34324387781480603,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036387540","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99778014,0.0004219699,0.00012497969,0.0011005794,0.000033527853,0.00024700817,0.000004782142,0.00000924595,0.0002777816],"genre_scores_gemma":[0.9962267,0.0026367104,0.0006466499,0.000095668394,0.00023661615,0.0000049888167,0.0000033471752,0.000018483406,0.00013082856],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99804103,0.00033751412,0.0008305589,0.00024062308,0.00026828947,0.00028196527],"domain_scores_gemma":[0.99877167,0.00037716608,0.0002965324,0.00015808428,0.00012292732,0.00027361928],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00050866714,0.00016242557,0.00083323976,0.00026140362,0.00006173359,0.000009352389,0.000060433904,0.00012179873,0.00004951111],"category_scores_gemma":[0.00030053203,0.00009977033,0.00006569095,0.00013368581,0.0006252517,0.00012564508,0.000045019548,0.0006662741,0.0000069148746],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0075595197,0.00049503054,0.9839098,0.0000117265745,0.0001996042,0.0009164921,0.00017464353,0.000014891246,0.00047314982,0.000012408532,0.00002523694,0.0062075076],"study_design_scores_gemma":[0.015836744,0.014577169,0.9656932,0.000114943774,0.00009157188,0.0028252576,0.000026963411,0.00013131672,0.00007601908,0.00001643076,0.000521278,0.000089102425],"about_ca_topic_score_codex":0.00018380256,"about_ca_topic_score_gemma":0.0010435792,"teacher_disagreement_score":0.018216586,"about_ca_system_score_codex":0.00014525815,"about_ca_system_score_gemma":0.00022184382,"threshold_uncertainty_score":0.40685162},"labels":[],"label_agreement":null},{"id":"W2041621912","doi":"10.1016/j.jcv.2007.10.024","title":"Respiratory syncytial virus (RSV) vaccines—Two steps back for one leap forward","year":2007,"lang":"en","type":"review","venue":"Journal of Clinical Virology","topic":"Respiratory viral infections research","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Public Health Agency","keywords":"Virology; Virus; Respiratory system; Medicine; Biology; Internal medicine","score_opus":0.4998419290563892,"score_gpt":0.6075598417945639,"score_spread":0.10771791273817471,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2041621912","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0009981676,0.98835415,0.002532146,0.0003137589,0.0031941482,0.0022983225,0.000047995643,0.00003206878,0.002229266],"genre_scores_gemma":[0.000043257995,0.98044443,0.0016746243,0.0026700816,0.013699747,0.000057105102,0.00001715864,0.00019686413,0.0011967471],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9869272,0.001940151,0.008394892,0.000761427,0.00097091636,0.0010054283],"domain_scores_gemma":[0.9848541,0.007573831,0.004100267,0.0010267264,0.0013928376,0.0010522461],"candidate_categories":["metaresearch","metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity","insufficient_payload"],"category_scores_codex":[0.013132646,0.00071043667,0.008498291,0.0014715531,0.00014304454,0.000047195965,0.00082328584,0.0023434449,0.0012318689],"category_scores_gemma":[0.009944262,0.00052135903,0.004529043,0.0006749708,0.00048893073,0.0002083601,0.0002465425,0.0055084694,0.00089134637],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0035473455,0.0012791653,0.0005343234,0.006292556,0.0020819244,0.0005027762,0.000003911793,0.0000026914774,0.000028847242,0.00015752496,0.01706805,0.9685009],"study_design_scores_gemma":[0.0071772984,0.013693816,0.0005666468,0.0031524291,0.0031451734,0.00080367795,0.0000035428482,0.00000536527,0.00001096962,0.00014305783,0.97093403,0.00036401706],"about_ca_topic_score_codex":0.000008387224,"about_ca_topic_score_gemma":0.000046280842,"teacher_disagreement_score":0.96813685,"about_ca_system_score_codex":0.00036097915,"about_ca_system_score_gemma":0.0033177247,"threshold_uncertainty_score":0.9998866},"labels":[],"label_agreement":null},{"id":"W2042351833","doi":"10.1016/j.jcv.2011.10.002","title":"Ten years of human metapneumovirus research","year":2011,"lang":"en","type":"review","venue":"Journal of Clinical Virology","topic":"Respiratory viral infections research","field":"Medicine","cited_by":131,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier universitaire de Québec; Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Human metapneumovirus; Metapneumovirus; Virology; Biology; Bronchiolitis; Respiratory tract infections; Pneumonia; Virus; Paramyxoviridae; Immunology; Viral disease; Medicine; Respiratory system","score_opus":0.7236775059830501,"score_gpt":0.672445481189621,"score_spread":0.05123202479342914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042351833","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.006725068,0.9869987,0.000005475652,0.00006287807,0.0005906068,0.0005465959,0.00000725003,0.000008287812,0.0050551794],"genre_scores_gemma":[0.0006990991,0.99644536,0.0001795286,0.00009693414,0.0015177793,0.000013384519,0.000003183395,0.000068259695,0.0009764989],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.98810697,0.004862236,0.005223718,0.00036705844,0.0009300917,0.00050991663],"domain_scores_gemma":[0.99099624,0.004007893,0.002419004,0.00086164987,0.0012063859,0.000508818],"candidate_categories":["metaresearch","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.018198067,0.00025664314,0.005662088,0.0018257794,0.00006385273,0.000012938003,0.0007950964,0.0013394741,0.0010364864],"category_scores_gemma":[0.0101323025,0.00018096737,0.002383047,0.0007886496,0.00139269,0.000090145244,0.000319346,0.0066781417,0.00038845674],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029397744,0.0008941306,0.00073074154,0.0027584303,0.0013518278,0.00072610524,0.000013979653,5.91273e-8,0.00003986957,0.0004963637,0.003327858,0.98936665],"study_design_scores_gemma":[0.0009489606,0.010041712,0.0038433918,0.0022035488,0.0012360583,0.000702218,0.0000056663703,2.127552e-7,0.0000054577104,0.0004031655,0.9804987,0.00011095245],"about_ca_topic_score_codex":0.000030372767,"about_ca_topic_score_gemma":0.0000067988376,"teacher_disagreement_score":0.9892557,"about_ca_system_score_codex":0.000097075375,"about_ca_system_score_gemma":0.0018240556,"threshold_uncertainty_score":0.999957},"labels":[],"label_agreement":null},{"id":"W2044441249","doi":"10.1016/s1386-6532(03)00164-1","title":"Once, twice, or three times daily famciclovir compared with aciclovir for the oral treatment of herpes zoster in immunocompetent adults: a randomized, multicenter, double-blind clinical trial","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":82,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta Hospital; Health Sciences Centre","funders":"SmithKline Beecham Pharma","keywords":"Famciclovir; Aciclovir; Medicine; Valaciclovir; Double blind; Randomized controlled trial; Clinical trial; Dermatology; Pediatrics; Surgery; Virology; Internal medicine; Herpesviridae; Viral disease; Virus; Alternative medicine; Pathology","score_opus":0.18227283426854513,"score_gpt":0.46294338868586504,"score_spread":0.2806705544173199,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2044441249","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9913323,0.0010997903,0.00079806906,0.0009170472,0.0013641999,0.0040944926,0.000014208186,0.000010342623,0.00036954874],"genre_scores_gemma":[0.9919883,0.0021202306,0.0043654083,0.0004825126,0.000513029,0.00022251105,0.000007018316,0.000035418376,0.00026555997],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9934044,0.0011936367,0.0043021888,0.00036804247,0.00033317454,0.0003985704],"domain_scores_gemma":[0.98762655,0.009357362,0.0019111801,0.00048325714,0.00037934125,0.00024228843],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0039014944,0.00034841904,0.0032843135,0.00019183592,0.00008400627,0.000022062797,0.00020703954,0.00037657225,0.00022855106],"category_scores_gemma":[0.0012742382,0.00015415109,0.0014464387,0.00021796083,0.0008125358,0.00011797319,0.000028988692,0.0004929489,0.000015288597],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.90069795,0.012113435,0.026997587,0.000020444304,0.0033301122,0.000143158,0.00011612861,0.000031141342,0.0000031174486,0.000076010554,0.00007187151,0.05639902],"study_design_scores_gemma":[0.8992101,0.032426268,0.010948934,0.00015471563,0.002000116,0.00017780896,0.00012481399,0.00046063674,0.000038342718,0.00006902616,0.054255202,0.00013401709],"about_ca_topic_score_codex":0.00012552454,"about_ca_topic_score_gemma":0.0006336214,"teacher_disagreement_score":0.056265004,"about_ca_system_score_codex":0.00008431406,"about_ca_system_score_gemma":0.0006215296,"threshold_uncertainty_score":0.6286099},"labels":[],"label_agreement":null},{"id":"W2046353331","doi":"10.1016/j.jcv.2009.03.019","title":"Low-risk human papillomavirus type 6 DNA load and integration in cervical samples from women with squamous intraepithelial lesions","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital; Université de Montréal; McGill University; Centre Hospitalier de l’Université de Montréal","funders":"Canadian Institutes of Health Research; Styrelsen för Internationellt Utvecklingssamarbete","keywords":"Squamous intraepithelial lesion; Colposcopy; Cervix; Odds ratio; Viral load; Medicine; Human papillomavirus; HPV infection; Confidence interval; Gynecology; Papillomaviridae; Obstetrics; Cervical intraepithelial neoplasia; Internal medicine; Virology; Cervical cancer; Cancer; Human immunodeficiency virus (HIV)","score_opus":0.06713763604137248,"score_gpt":0.4124723287455165,"score_spread":0.345334692704144,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2046353331","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959017,0.00031196803,0.00013584319,0.0028220294,0.00012306777,0.00012958265,0.000008293334,0.00000844326,0.00055907725],"genre_scores_gemma":[0.9957985,0.0009469634,0.00046257582,0.0018254468,0.0009237868,0.000001874727,0.0000042375896,0.0000109271705,0.000025632757],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9976586,0.0003566465,0.0010666361,0.0002299294,0.00039152484,0.000296652],"domain_scores_gemma":[0.9977863,0.0010413897,0.00030277227,0.00017785653,0.00028936524,0.00040232186],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0013700582,0.00013395141,0.00082130835,0.00012542417,0.00005568022,0.000018336386,0.00013288872,0.0002459602,0.0011840654],"category_scores_gemma":[0.0017885076,0.000084892614,0.00008089658,0.00016487463,0.00025815264,0.00007733528,0.00003573578,0.0014557329,0.0000122639785],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.05365177,0.0022839403,0.2096278,0.000023274344,0.00012632427,0.0005776399,0.00071495544,0.000012120568,0.013122593,0.0003060575,0.00040528958,0.7191482],"study_design_scores_gemma":[0.007116869,0.021307254,0.963804,0.000035921315,0.00007070324,0.000059756887,0.00011556089,0.000045180866,0.00023550971,0.0062650493,0.0008587827,0.00008541809],"about_ca_topic_score_codex":0.00019822734,"about_ca_topic_score_gemma":0.00091668003,"teacher_disagreement_score":0.7541762,"about_ca_system_score_codex":0.00010582398,"about_ca_system_score_gemma":0.00030930794,"threshold_uncertainty_score":0.999729},"labels":[],"label_agreement":null},{"id":"W2049320861","doi":"10.1016/j.jcv.2007.04.013","title":"Antibiotic use in children is not influenced by the result of rapid antigen detection test for the respiratory syncytial virus","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Respiratory viral infections research","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Medicine; Antibiotics; Pneumonia; Respiratory tract infections; Virus; Internal medicine; Respiratory system; Immunology; Microbiology; Biology","score_opus":0.11870236152326671,"score_gpt":0.46174706570454416,"score_spread":0.3430447041812774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049320861","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965008,0.0004589973,0.0008562489,0.0011266492,0.00032524284,0.0006635486,0.000020300326,0.0000065584118,0.00004166377],"genre_scores_gemma":[0.99414194,0.00045499182,0.000080364254,0.0045794984,0.000689141,0.0000028295403,6.471184e-7,0.00001988512,0.000030727297],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99616164,0.0005197441,0.0023038262,0.0002216399,0.00044416744,0.000348988],"domain_scores_gemma":[0.9894483,0.00846614,0.0010013692,0.00045052957,0.0004898303,0.00014384801],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.009806959,0.00014227386,0.0006638146,0.00029192521,0.00013041106,0.0000205147,0.00033611705,0.00038899988,0.000036985668],"category_scores_gemma":[0.017669382,0.00007774931,0.000377903,0.00042372604,0.00076627254,0.00016596518,0.00006317864,0.0014171612,0.00000946653],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005816245,0.00052537187,0.7077039,0.000011486206,0.00021276459,0.00001870019,0.000032474985,0.000027487371,0.24233338,0.000007349321,0.0016114287,0.041699406],"study_design_scores_gemma":[0.0039690486,0.0065270425,0.8951542,0.000030098385,0.000094907504,0.00010996946,0.00001790583,0.000087489745,0.08428641,0.000019337847,0.009639942,0.00006367858],"about_ca_topic_score_codex":0.00013543222,"about_ca_topic_score_gemma":0.00013943229,"teacher_disagreement_score":0.18745026,"about_ca_system_score_codex":0.000057308505,"about_ca_system_score_gemma":0.00026477492,"threshold_uncertainty_score":0.99060524},"labels":[],"label_agreement":null},{"id":"W2050208016","doi":"10.1016/j.jcv.2011.11.007","title":"Trichodysplasia spinulosa is characterized by active polyomavirus infection","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Polyomavirus and related diseases","field":"Medicine","cited_by":79,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Leids Universitair Medisch Centrum","keywords":"Immunofluorescence; Biology; Pathogenesis; Viral load; Pathology; Outer root sheath; Follicular phase; DNA; Immunohistochemistry; Antibody; Virology; Immunology; Molecular biology; Virus; Medicine","score_opus":0.09041549528403213,"score_gpt":0.4007262359401457,"score_spread":0.3103107406561136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2050208016","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935202,0.0007753223,0.00020887192,0.00082065345,0.0011550387,0.00016902699,0.000020931242,0.00002101091,0.0033089567],"genre_scores_gemma":[0.99079263,0.0031798102,0.0002215286,0.0043007876,0.0009661893,0.000004066646,0.000004977283,0.000022441802,0.00050754874],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99761313,0.0002653574,0.001427067,0.00019710451,0.00023167014,0.0002656745],"domain_scores_gemma":[0.99777675,0.00024872168,0.0011305538,0.00018602634,0.00016473338,0.00049320306],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00057281787,0.00016781728,0.0009235375,0.00017530279,0.00004851601,0.00000608759,0.000107717075,0.00052978046,0.0013392926],"category_scores_gemma":[0.00051105657,0.00011638511,0.0006218957,0.00014593861,0.00023540534,0.00016527784,0.000032840446,0.0009774226,0.000121566154],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.06486037,0.009935731,0.514619,0.00008675843,0.0036849447,0.0018968264,0.00044072006,1.7553563e-7,0.050362237,0.00016235365,0.027613586,0.3263373],"study_design_scores_gemma":[0.008130242,0.0059623714,0.8969582,0.000053171563,0.0009543859,0.00083364145,0.000012362139,0.0000111054105,0.005228501,0.00039544186,0.08131669,0.00014392837],"about_ca_topic_score_codex":0.000036837246,"about_ca_topic_score_gemma":0.0000010342391,"teacher_disagreement_score":0.38233915,"about_ca_system_score_codex":0.000028325696,"about_ca_system_score_gemma":0.00021595885,"threshold_uncertainty_score":0.99957365},"labels":[],"label_agreement":null},{"id":"W2051572554","doi":"10.1016/j.jcv.2008.01.016","title":"HHV-8 linked to Kaposi's sarcoma, Castleman's disease and primary effusion lymphoma in a HIV-1-infected man","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Viral-associated cancers and disorders","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Victoria Hospital; Royal Victoria Regional Health Centre; McGill University Health Centre; Montreal General Hospital","funders":"","keywords":"Medicine; Lymphoma; Retrospective cohort study; Radiology; Castleman disease; Lesion; Incidence (geometry); Radiation therapy; Chemotherapy; Disease; Surgery; Internal medicine","score_opus":0.03392440123387424,"score_gpt":0.34596748205047045,"score_spread":0.3120430808165962,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2051572554","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9863687,0.0008442547,0.000046824054,0.01159711,0.00028280792,0.00023440643,0.000005283771,0.000013520202,0.00060705957],"genre_scores_gemma":[0.9863294,0.0015632181,0.00037481156,0.011098152,0.00038201344,0.000003886095,0.000007122681,0.000020528576,0.0002208954],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99764943,0.00027787898,0.001238461,0.0002442091,0.0002789034,0.00031110446],"domain_scores_gemma":[0.9981553,0.0004300396,0.00044100877,0.00018364355,0.00012275773,0.00066722574],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007273911,0.00016164208,0.00094732275,0.00024219103,0.00005985959,0.000006185551,0.000108124776,0.0002725811,0.00007975104],"category_scores_gemma":[0.001299384,0.00012812986,0.00026217243,0.0002047581,0.00018558654,0.00007596196,0.000081081555,0.00048277504,0.000024061585],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.013339866,0.001356422,0.9551322,0.000045950484,0.00012937923,0.003883726,0.00020268257,0.00002466648,0.0014277991,0.000019514278,0.0096531855,0.014784651],"study_design_scores_gemma":[0.017320773,0.0028651543,0.9717487,0.000102484715,0.00015636788,0.00041035123,0.000022771492,0.00008702241,0.0000057410352,0.00022031082,0.0069432613,0.000117073316],"about_ca_topic_score_codex":0.000033839337,"about_ca_topic_score_gemma":0.000043513548,"teacher_disagreement_score":0.01661653,"about_ca_system_score_codex":0.00010893055,"about_ca_system_score_gemma":0.0004580882,"threshold_uncertainty_score":0.52249837},"labels":[],"label_agreement":null},{"id":"W2051682127","doi":"10.1016/j.jcv.2009.07.010","title":"Importance of viral and bacterial infections in chronic obstructive pulmonary disease exacerbations","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Chronic Obstructive Pulmonary Disease (COPD) Research","field":"Medicine","cited_by":111,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University; Centre hospitalier de l'Université Laval; Hôpital Maisonneuve-Rosemont; Institut National de Santé Publique du Québec","funders":"Sanofi Pasteur; Sanofi","keywords":"Pulmonary disease; Medicine; Intensive care medicine; Immunology; Internal medicine","score_opus":0.031365160207543784,"score_gpt":0.3793861663244682,"score_spread":0.34802100611692444,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2051682127","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99514127,0.001256228,0.00004085119,0.002306278,0.00033122904,0.00026211687,0.000023139344,0.000006790151,0.0006321208],"genre_scores_gemma":[0.9979742,0.0006196413,0.00020906699,0.00016735437,0.00093388435,0.000004195656,0.000008827127,0.000011895736,0.00007089606],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9973655,0.000306869,0.0014996935,0.00025802638,0.0002887548,0.00028116436],"domain_scores_gemma":[0.9978969,0.00055415154,0.00059669407,0.00025357492,0.00023569753,0.00046296776],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007032832,0.00014540255,0.0007725914,0.00028142234,0.000041029125,0.0000065906793,0.00012334707,0.0001611451,0.00027523146],"category_scores_gemma":[0.0015498955,0.00012568606,0.00028269785,0.00022031469,0.0005434464,0.00022665554,0.000056915756,0.0008121641,0.0000036948024],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0043841875,0.0014024836,0.9556868,0.00009344948,0.00009932304,0.00070938753,0.000031320204,0.00007361457,0.005028267,0.0009052198,0.000091182825,0.031494755],"study_design_scores_gemma":[0.0031178878,0.0015590391,0.9887505,0.00006775247,0.00014352464,0.00032998406,0.00002306386,0.0005584325,0.000024460061,0.004452794,0.0008857763,0.000086756074],"about_ca_topic_score_codex":0.000008260537,"about_ca_topic_score_gemma":0.000020659922,"teacher_disagreement_score":0.03306372,"about_ca_system_score_codex":0.00018082003,"about_ca_system_score_gemma":0.0012190705,"threshold_uncertainty_score":0.5125329},"labels":[],"label_agreement":null},{"id":"W2053247916","doi":"10.1016/s1386-6532(07)70005-7","title":"Nucleic acid amplification tests for detection of respiratory viruses","year":2007,"lang":"en","type":"review","venue":"Journal of Clinical Virology","topic":"Respiratory viral infections research","field":"Medicine","cited_by":72,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Provincial Laboratory of Public Health","funders":"University of Alberta","keywords":"Nucleic acid; Molecular diagnostics; Nucleic acid detection; Virology; Nucleic Acid Amplification Tests; Biology; NASBA; Virus; Human metapneumovirus; RNA; DNA; Computational biology; Respiratory system; Respiratory tract infections; Gene; Bioinformatics; Genetics","score_opus":0.5716811506882101,"score_gpt":0.6190188426861402,"score_spread":0.04733769199793003,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2053247916","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0076991366,0.98615974,0.0035218494,0.000034445948,0.0012025913,0.0011511826,0.00001573228,0.000018323251,0.00019697552],"genre_scores_gemma":[0.0017562072,0.9938001,0.00066381955,0.0008228756,0.0027824272,0.0000392383,0.0000036012393,0.00008477649,0.00004692789],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9925145,0.0009651931,0.0053582233,0.0003451867,0.0004827403,0.00033417947],"domain_scores_gemma":[0.9895413,0.004149026,0.0042609926,0.00057080586,0.0011645075,0.00031340326],"candidate_categories":["metaresearch","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.007964415,0.00029354595,0.0036000973,0.0011512383,0.00006768915,0.000012842178,0.00032636593,0.0014081748,0.000070675305],"category_scores_gemma":[0.013901648,0.0002142061,0.0019302292,0.0005317251,0.00047025556,0.00012046015,0.00005874433,0.002028972,0.00006047099],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010089587,0.0005073947,0.0005146562,0.003921358,0.00048195635,0.000030743984,0.0000032684766,5.059862e-7,0.0022730532,0.000045056953,0.0004930871,0.99072],"study_design_scores_gemma":[0.0014677522,0.009958984,0.0021958067,0.0016867098,0.0013007256,0.00028964478,0.0000033718943,0.000002523678,0.00045537992,0.00009342032,0.98241246,0.00013322967],"about_ca_topic_score_codex":0.0000021741414,"about_ca_topic_score_gemma":0.000007792963,"teacher_disagreement_score":0.99058676,"about_ca_system_score_codex":0.00015981389,"about_ca_system_score_gemma":0.0011913109,"threshold_uncertainty_score":0.9998882},"labels":[],"label_agreement":null},{"id":"W2056204908","doi":"10.1016/s1386-6532(07)70010-0","title":"Issues for reporting results","year":2007,"lang":"en","type":"review","venue":"Journal of Clinical Virology","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Joseph’s Healthcare Hamilton; McMaster University; London Health Sciences Centre; Western University","funders":"","keywords":"Intensive care medicine; Medicine; Diagnostic test; Pandemic; Test (biology); Disease; Coronavirus disease 2019 (COVID-19); Pediatrics; Pathology; Infectious disease (medical specialty); Biology","score_opus":0.5815106838585324,"score_gpt":0.6628620542499645,"score_spread":0.08135137039143203,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2056204908","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005687406,0.99429834,0.00019749661,0.000892119,0.0014844415,0.000600238,0.0000093287135,0.000014384692,0.0019349101],"genre_scores_gemma":[0.000010900344,0.9713132,0.0020719618,0.017699173,0.0085422145,0.0000098156515,0.000005198569,0.00005862887,0.0002889236],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.98569334,0.00044983608,0.01238119,0.0004140408,0.0005540152,0.0005076028],"domain_scores_gemma":[0.97773033,0.008510692,0.012362265,0.000521554,0.0007236997,0.0001514534],"candidate_categories":["metaresearch","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.02385079,0.00029459677,0.005840611,0.00045710403,0.000047585952,0.000017101162,0.00038939214,0.0013940666,0.000010045737],"category_scores_gemma":[0.082143985,0.00018626847,0.0030928408,0.00023501366,0.00025317463,0.00004653907,0.00010013915,0.0027172335,0.00005324727],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002401257,0.00027455817,0.00039279726,0.004016084,0.0006167911,0.0020273284,0.000010407365,1.3791292e-8,0.000003742441,0.000026696316,0.00839442,0.9818359],"study_design_scores_gemma":[0.0024977073,0.0038352422,0.00014401533,0.0041101826,0.0013056239,0.0029031835,0.000006324004,0.0000031506088,0.000009410976,0.00021371219,0.98483497,0.00013647368],"about_ca_topic_score_codex":0.000006248119,"about_ca_topic_score_gemma":0.000004484492,"teacher_disagreement_score":0.9816994,"about_ca_system_score_codex":0.00007290883,"about_ca_system_score_gemma":0.0018336949,"threshold_uncertainty_score":0.9999023},"labels":[],"label_agreement":null},{"id":"W2058048694","doi":"10.1016/j.jcv.2006.08.016","title":"Multi-year study of human metapneumovirus infection at a large US Midwestern Medical Referral Center","year":2006,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Respiratory viral infections research","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Human metapneumovirus; Center (category theory); Referral; Medicine; Metapneumovirus; Family medicine; Internal medicine; Respiratory tract infections","score_opus":0.19663438157635285,"score_gpt":0.5282940141299347,"score_spread":0.3316596325535819,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2058048694","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99784297,0.000051766216,0.00014671136,0.0003706966,0.0005805328,0.00030942168,0.0000033208164,0.000015997097,0.0006785973],"genre_scores_gemma":[0.9979414,0.000053456515,0.000098184726,0.00056140876,0.0009494339,0.0000059518215,0.0000035296662,0.000025306203,0.0003613274],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9943666,0.0013942694,0.00268405,0.00026460158,0.00093596627,0.00035454734],"domain_scores_gemma":[0.99748236,0.00044447157,0.0009475428,0.00035509287,0.00043421553,0.00033632197],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0041398895,0.00016277474,0.0011547188,0.0004063202,0.0001022144,0.000010155922,0.000180593,0.00046325682,0.00087284273],"category_scores_gemma":[0.0018607544,0.00012273711,0.00047735416,0.00022569128,0.000282046,0.00012867447,0.00019743473,0.001537427,0.000081366634],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016293431,0.010766582,0.9800577,0.000026394744,0.00026710093,0.00049048703,0.000031866944,0.000012279742,0.005276452,0.000024099834,0.0006265187,0.00079118036],"study_design_scores_gemma":[0.016239028,0.014376051,0.961133,0.00003412585,0.00018072025,0.00041569554,0.000022513397,0.000119985496,0.00021429738,0.000026978607,0.0071566296,0.000080955004],"about_ca_topic_score_codex":0.00027679576,"about_ca_topic_score_gemma":0.002669875,"teacher_disagreement_score":0.018924674,"about_ca_system_score_codex":0.0000879195,"about_ca_system_score_gemma":0.00015760637,"threshold_uncertainty_score":0.9557016},"labels":[],"label_agreement":null},{"id":"W2058464918","doi":"10.1016/j.jcv.2011.09.016","title":"Molecular and antigenic evolution of human influenza A/H3N2 viruses in Quebec, Canada, 2009–2011","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Centre hospitalier de l'Université Laval; Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Antigenic drift; Virology; Hemagglutination assay; Antigen; Biology; Titer; Antigenic variation; Strain (injury); Phylogenetic tree; Antigenic shift; Influenza A virus; Virus; Gene; Genetics","score_opus":0.1805782137802605,"score_gpt":0.45113718156156807,"score_spread":0.27055896778130756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2058464918","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941651,0.004591282,0.000027823195,0.00031005425,0.00015196177,0.00013429018,0.000004052078,0.0000032411356,0.0006121567],"genre_scores_gemma":[0.9974644,0.0002994918,0.00020605291,0.0018569703,0.00011157657,0.000001656494,2.0393632e-7,0.0000119504275,0.00004769987],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9969989,0.00036606746,0.0017688423,0.00017006401,0.0003872435,0.00030888713],"domain_scores_gemma":[0.99813795,0.00035913364,0.0007010003,0.00021104893,0.00037371233,0.0002171247],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015711348,0.00013181704,0.0009559543,0.00027029763,0.000036206704,0.0000027730514,0.0001626933,0.00021276058,0.00015118573],"category_scores_gemma":[0.0020705508,0.000103014434,0.00016095914,0.00011773016,0.00046611024,0.00010063584,0.000103727994,0.00076307973,0.0000047319268],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001983828,0.00035317818,0.9765428,0.000055358072,0.00028990407,0.0005183321,0.00018855516,0.000005560995,0.017076641,0.0005109237,0.0014511088,0.0010238602],"study_design_scores_gemma":[0.0031820743,0.0016290842,0.9888991,0.00006313944,0.000095810894,0.000043739354,0.000103921535,0.0000107440455,0.0023234326,0.0005375059,0.0030316485,0.00007979597],"about_ca_topic_score_codex":0.36774528,"about_ca_topic_score_gemma":0.58102053,"teacher_disagreement_score":0.21327527,"about_ca_system_score_codex":0.00011270659,"about_ca_system_score_gemma":0.0010994703,"threshold_uncertainty_score":0.63646495},"labels":[],"label_agreement":null},{"id":"W2058545849","doi":"10.1016/s1386-6532(02)00234-2","title":"Successful HCV genotyping of previously failed and low viral load specimens using an HCV RNA qualitative assay based on transcription-mediated amplification in conjunction with the line probe assay","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Hepatitis C virus research","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Ministry of Health; BC Centre for Disease Control","funders":"","keywords":"Genotyping; Virology; Amplicon; Genotype; Viral load; Hepatitis C virus; Typing; Biology; Hepacivirus; Molecular biology; Polymerase chain reaction; Virus; Genetics; Gene","score_opus":0.1411137628036394,"score_gpt":0.42716052845049207,"score_spread":0.28604676564685266,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2058545849","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9738781,0.00012958838,0.019176168,0.005811863,0.00011410504,0.00058253115,0.000008869761,0.000008781965,0.00029000806],"genre_scores_gemma":[0.9968366,0.00024109294,0.0017248214,0.00085465104,0.0002738876,0.0000073712176,0.0000092723385,0.000024173807,0.000028151242],"study_design_codex":"observational","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.993712,0.003431961,0.0015970126,0.00028523032,0.0006812297,0.00029256986],"domain_scores_gemma":[0.9949004,0.002988279,0.0009793257,0.00026114375,0.00065211696,0.00021873666],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.008726814,0.00017277799,0.00084893056,0.00027646945,0.000064216125,0.000020053236,0.00014785312,0.00027938138,0.00021689956],"category_scores_gemma":[0.003679791,0.00010933368,0.00012857327,0.00030609302,0.00050633744,0.0002236551,0.000012712527,0.0012141779,0.000007215159],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.055792715,0.013092919,0.4867393,0.00081771595,0.0012965936,0.0006925113,0.022441957,0.008669795,0.2658165,0.00054054556,0.00050159823,0.14359784],"study_design_scores_gemma":[0.031786,0.0346137,0.45732322,0.0011866534,0.00064082124,0.00006695797,0.0019538368,0.4674731,0.0018155831,0.00046403875,0.0021631157,0.0005129716],"about_ca_topic_score_codex":0.00008978131,"about_ca_topic_score_gemma":0.00033829748,"teacher_disagreement_score":0.4588033,"about_ca_system_score_codex":0.00014785335,"about_ca_system_score_gemma":0.00037226055,"threshold_uncertainty_score":0.52750665},"labels":[],"label_agreement":null},{"id":"W2058556613","doi":"10.1016/j.jcv.2013.10.015","title":"Human papillomavirus type 56 polymorphism in Canadian women with and without cervical lesions","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Queen's University; Université de Montréal; Montreal Clinical Research Institute; University of Toronto; University Health Network; Women's Health Research Institute; Public Health Ontario; University of British Columbia; McGill University; Centre Hospitalier de l’Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Human papillomavirus; Polymorphism (computer science); Medicine; Oncology; Virology; Gynecology; Genetics; Internal medicine; Biology; Genotype; Gene","score_opus":0.08084124919046878,"score_gpt":0.43143279064852497,"score_spread":0.35059154145805616,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2058556613","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98510146,0.000312984,0.0000021588367,0.00912075,0.00010386379,0.00015414416,0.0000012203514,0.0000039580045,0.0051994617],"genre_scores_gemma":[0.9943754,0.00019612555,0.00013892056,0.0043928027,0.0004931144,0.000005704433,7.7418105e-7,0.000015559908,0.00038156586],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981146,0.00018241948,0.0007843633,0.00017257092,0.00025036783,0.0004956865],"domain_scores_gemma":[0.9978614,0.00019886452,0.00015086493,0.0001665904,0.00024820314,0.0013740847],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010049954,0.00010642864,0.00071496767,0.00023870393,0.000054510427,0.000016139578,0.00012831517,0.0002471677,0.00585747],"category_scores_gemma":[0.00044358277,0.00006859763,0.000072343864,0.00017137187,0.00032798955,0.00007494214,0.000043192395,0.0011176962,0.00005534548],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00170719,0.00021038143,0.96462303,0.000021903626,0.00010733797,0.00027388858,0.00011264188,0.0000011485515,0.00032434808,0.00020400755,0.0009734118,0.031440713],"study_design_scores_gemma":[0.004006573,0.0049894038,0.98158354,0.000018169423,0.00003476324,0.0002494731,0.00007120445,0.000027415563,0.0000047610965,0.0009517283,0.007990641,0.00007232361],"about_ca_topic_score_codex":0.026230503,"about_ca_topic_score_gemma":0.05852301,"teacher_disagreement_score":0.032292508,"about_ca_system_score_codex":0.000113465525,"about_ca_system_score_gemma":0.0007957695,"threshold_uncertainty_score":0.9950513},"labels":[],"label_agreement":null},{"id":"W2067332521","doi":"10.1016/j.jcv.2014.03.001","title":"Human metapneumovirus viral load is an important risk factor for disease severity in young children","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Respiratory viral infections research","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Institut National de Santé Publique du Québec; Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Human metapneumovirus; Viral load; Virology; Risk factor; Medicine; Metapneumovirus; Disease; Immunology; Internal medicine; Respiratory tract infections; Human immunodeficiency virus (HIV); Respiratory system","score_opus":0.09650595675245481,"score_gpt":0.4724860656063399,"score_spread":0.37598010885388505,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2067332521","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99791515,0.00011332567,0.00031469308,0.00069803564,0.00034486232,0.00040805046,0.00007239432,0.000012347999,0.00012112519],"genre_scores_gemma":[0.9966796,0.00010475518,0.0002993125,0.0015832325,0.0011911883,0.000009651292,0.0000031896377,0.000025852234,0.00010318585],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99552053,0.0010232376,0.0022421572,0.00034121604,0.00047651157,0.00039633288],"domain_scores_gemma":[0.9970285,0.0004868031,0.00096395356,0.00045501298,0.00034208546,0.0007236025],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004930685,0.0001859627,0.0010574263,0.0002625007,0.00010675495,0.000025930958,0.00026388423,0.00029749083,0.00041347023],"category_scores_gemma":[0.005160536,0.00013961374,0.0006034775,0.00013381476,0.0002813761,0.00025241627,0.0000637484,0.0014614175,0.000024793591],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023847648,0.0009516316,0.9831434,0.000015692169,0.00018480449,0.000050531293,0.00003633698,0.000007057404,0.0015759923,0.000051650346,0.00027128632,0.011326875],"study_design_scores_gemma":[0.0050365645,0.006315573,0.9835931,0.00001432197,0.00020747956,0.0000723314,0.0000047650396,0.00078673544,0.00015221426,0.0017488155,0.0019442643,0.00012382431],"about_ca_topic_score_codex":0.000112097616,"about_ca_topic_score_gemma":0.00025470305,"teacher_disagreement_score":0.011203051,"about_ca_system_score_codex":0.000093193135,"about_ca_system_score_gemma":0.00034630654,"threshold_uncertainty_score":0.6349214},"labels":[],"label_agreement":null},{"id":"W2067556400","doi":"10.1016/s1386-6532(07)70008-2","title":"The clinical need for the RVP test","year":2007,"lang":"en","type":"review","venue":"Journal of Clinical Virology","topic":"Respiratory viral infections research","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Joseph’s Healthcare Hamilton; McMaster University","funders":"","keywords":"Test (biology); Medicine; Medical physics; Biology","score_opus":0.6313484854333217,"score_gpt":0.6827718899908617,"score_spread":0.05142340455754002,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2067556400","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00007847562,0.9885892,0.00068049674,0.0041446504,0.004164646,0.001530065,0.000009333695,0.000012449848,0.00079063425],"genre_scores_gemma":[0.000027937904,0.98367256,0.00025146175,0.0023859802,0.011863708,0.000042594613,0.0000025688946,0.00006709266,0.0016860736],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9887248,0.0020009992,0.0076936837,0.00034928822,0.00062396994,0.0006072259],"domain_scores_gemma":[0.8536701,0.1405047,0.0034416243,0.0009811901,0.00092054356,0.00048183225],"candidate_categories":["metaresearch","research_integrity"],"consensus_categories":["metaresearch","research_integrity"],"category_scores_codex":[0.036722377,0.0003487422,0.004129917,0.00024978622,0.00034516567,0.00006059143,0.0010489698,0.0015699799,0.00010546423],"category_scores_gemma":[0.08323926,0.00013843749,0.0047561848,0.00042458175,0.0017041531,0.00005607025,0.0001903793,0.0067217196,0.00019548346],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00068636687,0.0004509482,0.0013248288,0.00052966154,0.0010559745,0.00010432631,0.0000013672467,2.5630385e-7,2.2405197e-7,0.00013851176,0.03474267,0.96096486],"study_design_scores_gemma":[0.0019023585,0.008155863,0.0022776746,0.0008389506,0.0024295081,0.0010084328,0.000008453339,0.000014971871,1.5612598e-7,0.0001600797,0.98308945,0.000114115704],"about_ca_topic_score_codex":0.0000021529834,"about_ca_topic_score_gemma":0.000012257275,"teacher_disagreement_score":0.9608508,"about_ca_system_score_codex":0.00008112849,"about_ca_system_score_gemma":0.0023791748,"threshold_uncertainty_score":0.9997262},"labels":[],"label_agreement":null},{"id":"W2068304890","doi":"10.1016/j.jcv.2009.09.024","title":"Difficulty with mumps diagnosis: What is the contribution of mumps mimickers?","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Capital District Health Authority; Nova Scotia Health Authority; Dalhousie University","funders":"","keywords":"Parotitis; Medicine; Mumps virus; Outbreak; Serology; Virology; Pediatrics; Virus; Immunology; Surgery; Antibody","score_opus":0.037193494688304275,"score_gpt":0.39109070531770657,"score_spread":0.35389721062940227,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2068304890","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9334717,0.0031042509,0.00012448207,0.06273041,0.00032399248,0.00017566829,0.000004302171,0.0000075515327,0.000057680903],"genre_scores_gemma":[0.9702272,0.0048671155,0.00009342139,0.024255456,0.0005127142,0.0000031254192,0.000004190148,0.0000066879825,0.000030124542],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9976759,0.000397721,0.0012550002,0.00016908858,0.00026533057,0.00023699366],"domain_scores_gemma":[0.99707067,0.0010822959,0.0010031974,0.00025984086,0.0003751388,0.00020884551],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010558408,0.00014409295,0.00090411364,0.00006591875,0.000063031424,0.000011158897,0.00019504366,0.0003237647,0.00016821605],"category_scores_gemma":[0.0014646737,0.00007155182,0.00046334256,0.00011124848,0.0005608217,0.00021926442,0.00002119566,0.0007533784,0.000017061873],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.03504246,0.005416336,0.87040526,0.000031761425,0.0013766875,0.0006924238,0.0003642596,0.000040586896,0.002332789,0.0012961149,0.020678783,0.06232256],"study_design_scores_gemma":[0.0059562973,0.011819144,0.97150147,0.00016051825,0.0008984722,0.00034650584,0.00015333394,0.00004460291,0.00064068596,0.0012104152,0.007192054,0.00007649048],"about_ca_topic_score_codex":0.000002268869,"about_ca_topic_score_gemma":0.0000059375884,"teacher_disagreement_score":0.10109624,"about_ca_system_score_codex":0.000013773216,"about_ca_system_score_gemma":0.0001385713,"threshold_uncertainty_score":0.3273096},"labels":[],"label_agreement":null},{"id":"W2068648000","doi":"10.1016/j.jcv.2014.07.019","title":"Human papillomavirus and host genetic polymorphisms in carcinogenesis: A systematic review and meta-analysis","year":2014,"lang":"en","type":"review","venue":"Journal of Clinical Virology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; University of Toronto; Ontario Institute for Cancer Research; Princess Margaret Cancer Centre","funders":"","keywords":"Carcinogenesis; Meta-analysis; Genotype; Odds ratio; Oncology; Biology; Cancer; Genetics; Genetic model; Cervical cancer; Head and neck cancer; Case-control study; Human papillomavirus; Bioinformatics; Internal medicine; Gene; Medicine","score_opus":0.2995900445391437,"score_gpt":0.5315856757147792,"score_spread":0.23199563117563554,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2068648000","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00012297933,0.9976728,0.00000954504,0.0008316331,0.000042369225,0.0011694112,0.000012231562,0.000003575831,0.00013548159],"genre_scores_gemma":[0.0012644705,0.99547976,0.000069737565,0.0026680836,0.00023201156,0.000070791306,0.000003344715,0.000035897483,0.00017588855],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9899358,0.0030226118,0.0057085366,0.0004803142,0.00050924026,0.0003435025],"domain_scores_gemma":[0.9943988,0.0018082544,0.0023754393,0.00060516095,0.00024426548,0.0005680784],"candidate_categories":["metaepi_broad","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0063398276,0.00041691406,0.02491225,0.0007104037,0.000040613428,0.00002209532,0.00031054797,0.0006142558,0.0011166702],"category_scores_gemma":[0.001862185,0.00023038207,0.0043798005,0.00056341896,0.0003204776,0.000029698607,0.00016381509,0.001515445,0.0000134959655],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057482895,0.00019106189,0.00067492423,0.85841054,0.1215117,0.00053036684,0.000008483722,7.709892e-8,2.27548e-7,0.000027808705,0.0000991895,0.018488161],"study_design_scores_gemma":[0.00082584185,0.0012844801,0.013325845,0.008627174,0.95793307,0.0009852005,0.0000017653974,0.0000016995531,2.961622e-8,0.000036859437,0.016787073,0.00019098823],"about_ca_topic_score_codex":0.000042317264,"about_ca_topic_score_gemma":0.00008789599,"teacher_disagreement_score":0.84978336,"about_ca_system_score_codex":0.00004918251,"about_ca_system_score_gemma":0.00027751326,"threshold_uncertainty_score":0.99979645},"labels":[],"label_agreement":null},{"id":"W2069461401","doi":"10.1016/j.jcv.2010.12.003","title":"Comparative evaluation of AMPLICOR HPV PCR and Linear Array assays on SurePath liquid-based Pap samples for the detection of high-risk HPV genotypes","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; St. Joseph’s Healthcare Hamilton","funders":"","keywords":"Ascus (bryozoa); Kappa; Medicine; Liquid-based cytology; Cervical cancer; Pap test; Gynecology; Genotype; Cytology; Cervical cancer screening; Human papillomavirus; Concordance; Virology; Internal medicine; Cancer; Biology; Pathology; Mathematics; Gene","score_opus":0.21323121740939244,"score_gpt":0.4853119720784159,"score_spread":0.2720807546690235,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069461401","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9868361,0.0003109632,0.010464846,0.0013387707,0.00042980013,0.00044576175,0.000028338323,0.0000032866283,0.00014213058],"genre_scores_gemma":[0.99762785,0.00021678045,0.0010286493,0.00025786503,0.00083864544,0.000012150129,0.0000037506516,0.000009490819,0.000004827394],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.997502,0.0005859732,0.0010505867,0.00016178229,0.00055153586,0.00014812216],"domain_scores_gemma":[0.98984873,0.0074473745,0.0008887157,0.00022195482,0.0014636227,0.00012958288],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0073995735,0.000098383825,0.0007727125,0.00010318993,0.00006535578,0.00000456177,0.00011724852,0.00023515882,0.0004738909],"category_scores_gemma":[0.0063242004,0.00005686185,0.00025742865,0.00009346885,0.0003626258,0.000030354271,0.00001734627,0.00091365055,0.0000016189241],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.12434628,0.002240441,0.061702993,0.00025447528,0.0012671698,0.000004199975,0.00042422,0.0016413478,0.18600073,0.00070492754,0.0002744249,0.6211388],"study_design_scores_gemma":[0.0068930048,0.017809771,0.9290555,0.000010258019,0.00073323573,0.000011159926,0.000047843885,0.006482078,0.035655957,0.0014535163,0.0017902717,0.00005737294],"about_ca_topic_score_codex":0.00011288133,"about_ca_topic_score_gemma":0.0006138475,"teacher_disagreement_score":0.86735255,"about_ca_system_score_codex":0.000019308025,"about_ca_system_score_gemma":0.00036770574,"threshold_uncertainty_score":0.7571115},"labels":[],"label_agreement":null},{"id":"W2072933304","doi":"10.1016/s1386-6532(05)80024-1","title":"The natural history of chronic hepatitis B virus infection","year":2005,"lang":"en","type":"review","venue":"Journal of Clinical Virology","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":107,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal; Hôpital Saint-Luc","funders":"","keywords":"Immune system; HBeAg; Immunology; Chronic infection; Viral load; Cirrhosis; Hepatitis B virus; Virology; Hepatitis; Medicine; Virus; Hepatitis B; Viral replication; Biology; HBsAg; Internal medicine","score_opus":0.1206112844082315,"score_gpt":0.4543903390956099,"score_spread":0.3337790546873784,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2072933304","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0006474531,0.98954016,0.000016327003,0.00037016527,0.008405138,0.00030312288,0.0000061922447,0.000010223573,0.000701236],"genre_scores_gemma":[0.00056351954,0.9920507,0.00007933886,0.0003505539,0.0055305744,0.000009976311,0.000003938879,0.00004102327,0.0013703969],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9936249,0.0010655167,0.0043596053,0.00022083214,0.00041898174,0.00031014028],"domain_scores_gemma":[0.9909142,0.003623822,0.0045048543,0.00038802758,0.00041122502,0.00015785488],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0026470427,0.0003120135,0.004344278,0.00021287726,0.000058066318,0.000004306696,0.00026852277,0.0007170228,0.00016549593],"category_scores_gemma":[0.005144304,0.00017574581,0.0021858148,0.000118814874,0.00084224815,0.00006832086,0.0001153569,0.0028325103,0.00008040426],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012372628,0.00021091089,0.0031127941,0.001304255,0.0011373195,0.00009844192,0.000014771912,3.4589186e-7,0.0000010112644,0.000041348572,0.023462735,0.97049236],"study_design_scores_gemma":[0.0007221314,0.0025759574,0.0109216105,0.0026094394,0.0023902731,0.00076167897,2.3054346e-7,0.000009150471,1.901161e-7,0.000022654413,0.9798683,0.00011839522],"about_ca_topic_score_codex":0.0005072773,"about_ca_topic_score_gemma":0.0069418172,"teacher_disagreement_score":0.9703739,"about_ca_system_score_codex":0.0011771455,"about_ca_system_score_gemma":0.0030311253,"threshold_uncertainty_score":0.99946797},"labels":[],"label_agreement":null},{"id":"W2075312793","doi":"10.1016/j.jcv.2010.03.016","title":"EBV viral load detection in clinical virology","year":2010,"lang":"en","type":"review","venue":"Journal of Clinical Virology","topic":"Viral-associated cancers and disorders","field":"Medicine","cited_by":83,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Rituximab; Medicine; Viral load; Immunology; Epstein–Barr virus; Virology; Lymphoproliferative disorders; Virus; Internal medicine; Lymphoma","score_opus":0.09543750489522093,"score_gpt":0.4832395128846017,"score_spread":0.3878020079893808,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2075312793","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.021365942,0.9668643,0.000065740045,0.0010791805,0.00853752,0.0005648393,0.00000976658,0.000024292658,0.0014884325],"genre_scores_gemma":[0.0036035555,0.98872626,0.00017317409,0.0027871365,0.0043713157,0.000014674968,0.000009895516,0.000080345046,0.00023364433],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9872877,0.0023274529,0.008509734,0.0006490339,0.00054712174,0.00067895884],"domain_scores_gemma":[0.99007195,0.0029552875,0.0055544837,0.0005645478,0.00029036857,0.0005633347],"candidate_categories":["metaresearch","metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.009346137,0.000547929,0.008258235,0.00049296167,0.000053903856,0.000016657756,0.00051086396,0.0055980217,0.00030760953],"category_scores_gemma":[0.0098813465,0.0004006962,0.0039732014,0.00034682846,0.0007075243,0.000109090535,0.00012941007,0.011385471,0.00018535678],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018831379,0.0009355224,0.0024468955,0.00057093386,0.0005402683,0.00064899924,0.000009974684,7.5522536e-7,0.0000043279438,0.000022844431,0.0014225024,0.99151385],"study_design_scores_gemma":[0.008218017,0.007836425,0.008266477,0.0011680053,0.00254414,0.0010109007,0.000008993305,0.0000133231215,4.028791e-7,0.0005900174,0.9700487,0.00029454447],"about_ca_topic_score_codex":0.000031013606,"about_ca_topic_score_gemma":0.00038066282,"teacher_disagreement_score":0.9912193,"about_ca_system_score_codex":0.00026805376,"about_ca_system_score_gemma":0.00297106,"threshold_uncertainty_score":0.9998445},"labels":[],"label_agreement":null},{"id":"W2076951669","doi":"10.1016/j.jcv.2014.06.019","title":"Variable expression of the forgotten oncogene E5 in HPV-positive oropharyngeal cancer","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Head and Neck Cancer Studies","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; Western University","funders":"","keywords":"Epidermal growth factor receptor; Oncogene; Cancer; Medicine; Internal medicine; Oncology; Squamous cell cancer; Cervical cancer; Head and neck cancer; Cancer research; Molecular medicine; Cell cycle","score_opus":0.046491454918767654,"score_gpt":0.4116141650156498,"score_spread":0.36512271009688213,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076951669","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.987186,0.00077484443,0.00019424163,0.0061993916,0.0011909499,0.000120548124,0.000004349755,0.0000017446775,0.0043278956],"genre_scores_gemma":[0.99403584,0.00063225883,0.0006855628,0.0036555394,0.0007359334,0.0000028996963,2.9438584e-7,0.000009138803,0.00024253788],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99805313,0.00035415712,0.0010832426,0.00012426688,0.00021099614,0.00017423127],"domain_scores_gemma":[0.9979618,0.0010092339,0.0006049685,0.00016417021,0.00017173115,0.00008808269],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013316319,0.00008646349,0.0010175115,0.00005198885,0.000025316607,0.0000014420947,0.00014396847,0.00017364917,0.00016159627],"category_scores_gemma":[0.0010579965,0.000046776317,0.00021287981,0.00011379526,0.00014907449,0.000041662424,0.000083534054,0.0005760893,0.0000031943466],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006746681,0.00090451265,0.8561053,0.00011787321,0.00026142175,0.00004766759,0.00036125982,0.00016931583,0.09400428,0.00040665164,0.007923832,0.032951202],"study_design_scores_gemma":[0.0058028703,0.0031860892,0.9692628,0.0003808333,0.00015120006,0.000046288005,0.0000398151,0.00015991635,0.00878856,0.0005595894,0.0115613295,0.0000607272],"about_ca_topic_score_codex":0.000045735716,"about_ca_topic_score_gemma":0.000035237597,"teacher_disagreement_score":0.11315748,"about_ca_system_score_codex":0.000035795376,"about_ca_system_score_gemma":0.0002949035,"threshold_uncertainty_score":0.25028533},"labels":[],"label_agreement":null},{"id":"W2076982220","doi":"10.1016/j.jcv.2010.11.013","title":"Evaluation of pandemic H1N1 (2009) influenza vaccine in adults with solid tumor and hematological malignancies on active systemic treatment","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre","funders":"","keywords":"Medicine; Seroconversion; Vaccination; Internal medicine; Chemotherapy; Titer; Antibody titer; Immunology; Antibody","score_opus":0.1757784312088287,"score_gpt":0.49488434924886643,"score_spread":0.31910591804003774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076982220","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99789965,0.0008488776,0.0000039843912,0.00039796854,0.00013560659,0.00054647506,0.0000064544083,0.000006189443,0.00015477589],"genre_scores_gemma":[0.9984377,0.00051848503,0.00018583464,0.0006295528,0.00018757192,0.000024330233,5.6505155e-7,0.000010547211,0.0000053888075],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9965581,0.0006433522,0.001561156,0.00023387864,0.0007247123,0.00027874327],"domain_scores_gemma":[0.99588597,0.0017124399,0.0009659874,0.00020775065,0.0010506561,0.00017718434],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00442033,0.00017924982,0.0013872862,0.00024577166,0.000032483098,0.0000039595325,0.000096435266,0.00023812703,0.00005140729],"category_scores_gemma":[0.007819157,0.00009739699,0.00013291521,0.00012501428,0.0003021855,0.000074936244,0.0000422754,0.00092782755,0.00000595616],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.03942272,0.001233284,0.9336975,0.00011586717,0.0005553341,0.00032178633,0.0004938857,0.0000948691,0.007417121,0.00007784819,0.000048716534,0.016521053],"study_design_scores_gemma":[0.025082523,0.01909244,0.9505347,0.0006256325,0.00042879547,0.0016589742,0.00031643105,0.00038808052,0.0013208654,0.0002727218,0.00018644787,0.0000923938],"about_ca_topic_score_codex":0.000021618303,"about_ca_topic_score_gemma":0.00016904644,"teacher_disagreement_score":0.017859157,"about_ca_system_score_codex":0.00009746835,"about_ca_system_score_gemma":0.00054808665,"threshold_uncertainty_score":0.9360826},"labels":[],"label_agreement":null},{"id":"W2077982236","doi":"10.1016/j.jcv.2007.06.001","title":"Utilization of RNA polymerase I promoter and terminator sequences to develop a DNA transfection system for the study of hepatitis C virus internal ribosomal entry site-dependent translation","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Hepatitis C virus research","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Terminator (solar); Internal ribosome entry site; Virology; Molecular biology; RNA polymerase I; Biology; Polymerase; Transfection; RNA; DNA; RNA-dependent RNA polymerase; Genetics; Gene; Ribosome; Physics","score_opus":0.10631406111731033,"score_gpt":0.4395057312610212,"score_spread":0.33319167014371087,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077982236","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9717086,0.00017497844,0.026148612,0.0005050143,0.00037107698,0.0010231306,0.000019979194,0.0000055590976,0.000043032713],"genre_scores_gemma":[0.9988928,0.0002461688,0.00047623913,0.00009658891,0.00024832974,0.000011333868,0.0000017500098,0.000014064993,0.000012741359],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9967842,0.00042553898,0.0019268971,0.00017745334,0.00049210974,0.00019376252],"domain_scores_gemma":[0.9970742,0.0014704316,0.0005713561,0.00012767552,0.0005782567,0.00017808401],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0038324508,0.00011344476,0.00064473023,0.00025011718,0.00005012417,0.000008736089,0.00012363032,0.00018065749,0.000023448776],"category_scores_gemma":[0.0010616833,0.00007546555,0.00013134143,0.0002160867,0.00013548258,0.00010222261,0.00002053434,0.00034399205,9.973128e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009078704,0.0010500102,0.569757,0.00024114424,0.00035799702,0.00012996969,0.0024505493,0.000011400068,0.069970764,0.000016162747,0.000014398212,0.34692192],"study_design_scores_gemma":[0.00863991,0.020827994,0.87845486,0.00030697096,0.00047518185,0.00031385157,0.00070131785,0.0014849073,0.088353254,0.000022808177,0.00030882077,0.0001101045],"about_ca_topic_score_codex":0.000428214,"about_ca_topic_score_gemma":0.0020454556,"teacher_disagreement_score":0.34681183,"about_ca_system_score_codex":0.00004894839,"about_ca_system_score_gemma":0.00020121459,"threshold_uncertainty_score":0.3077396},"labels":[],"label_agreement":null},{"id":"W2089574594","doi":"10.1016/j.jcv.2011.12.019","title":"Incidence of cytomegalovirus UL97 and UL54 amino acid substitutions detected after 100 or 200 days of valganciclovir prophylaxis","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":54,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier universitaire de Québec; Université Laval","funders":"","keywords":"Valganciclovir; Ganciclovir; Medicine; Resistance mutation; Internal medicine; Incidence (geometry); Cytomegalovirus; Virus; Clearance; Gastroenterology; Virology; Human cytomegalovirus; Biology; Herpesviridae; Viral disease; Gene; Urology; Polymerase chain reaction; Reverse transcriptase","score_opus":0.07612647721950522,"score_gpt":0.4099442745143804,"score_spread":0.3338177972948752,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2089574594","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99504244,0.0031423504,0.0004426779,0.00036963067,0.00038126245,0.00029474896,0.00002900748,0.000009197332,0.00028866157],"genre_scores_gemma":[0.99566644,0.0014568019,0.001663266,0.0003107426,0.0006830356,0.00000805777,0.0000014149754,0.000024187977,0.00018605884],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99571574,0.00043285245,0.002425775,0.00024012363,0.0006557983,0.0005297375],"domain_scores_gemma":[0.99583644,0.0013271401,0.0010712051,0.0004173104,0.00070010155,0.0006478052],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0030429102,0.00021782007,0.0014629671,0.0004510669,0.000056518304,0.000009560102,0.00026111965,0.00051461376,0.00092567253],"category_scores_gemma":[0.004700069,0.00014587861,0.0003978111,0.000465141,0.0012455279,0.0003000377,0.00016120367,0.001259129,0.000042025826],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.02332144,0.0017780309,0.84313333,0.00029885327,0.00046830476,0.00037958895,0.00036230063,0.000002605113,0.099509716,0.0001390135,0.00039128505,0.030215532],"study_design_scores_gemma":[0.0039732973,0.0065927887,0.96303725,0.0001395956,0.00029406275,0.0010146627,0.000049220595,0.00005042817,0.014911073,0.00011186947,0.009673775,0.00015199874],"about_ca_topic_score_codex":0.000069555055,"about_ca_topic_score_gemma":0.000091414826,"teacher_disagreement_score":0.1199039,"about_ca_system_score_codex":0.000055135453,"about_ca_system_score_gemma":0.00072358176,"threshold_uncertainty_score":0.9999876},"labels":[],"label_agreement":null},{"id":"W2095096270","doi":"10.1016/j.jcv.2014.04.021","title":"Virological characteristics of occult hepatitis B virus in a North American cohort of human immunodeficiency virus type 1-positive patients on dual active anti-HBV/HIV therapy","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; Memorial University of Newfoundland; University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"HBsAg; Hepatitis B virus; cccDNA; Virology; Medicine; Lamivudine; Hepatitis B; Orthohepadnavirus; Immunology; Peripheral blood mononuclear cell; Virus; Biology","score_opus":0.03999714462551455,"score_gpt":0.36857100186754416,"score_spread":0.3285738572420296,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095096270","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985666,0.000049721937,0.000025723564,0.00020162048,0.00036774,0.00034549957,0.00012640562,0.00000810277,0.00030854496],"genre_scores_gemma":[0.99433583,0.0038957873,0.0001368153,0.0013477276,0.00021890037,0.0000052381706,0.000027322794,0.000025589996,0.0000067763867],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9948723,0.00097312505,0.002851061,0.00033875956,0.00058583205,0.00037897273],"domain_scores_gemma":[0.9943128,0.0015294845,0.002795885,0.0003339468,0.0008648083,0.0001630672],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012011209,0.00028421436,0.002598981,0.0002725964,0.00006908568,0.000004879998,0.0002479884,0.00024175034,0.00006623577],"category_scores_gemma":[0.003679516,0.00021038261,0.00038325207,0.00038398185,0.0012418542,0.000077128905,0.000102351194,0.001092721,0.000017734284],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0059735253,0.003740372,0.9699388,0.000014205553,0.00036166763,0.00008853039,0.00034282927,0.0000051308066,0.006220416,0.000043843735,0.000059619568,0.013211047],"study_design_scores_gemma":[0.0036507417,0.032315608,0.962007,0.00006926324,0.00014187694,0.000016604701,0.000014000578,0.000036714966,0.0013535182,0.000030765244,0.00021224697,0.00015167631],"about_ca_topic_score_codex":0.0010362945,"about_ca_topic_score_gemma":0.0011049508,"teacher_disagreement_score":0.028575234,"about_ca_system_score_codex":0.00006965694,"about_ca_system_score_gemma":0.00013139336,"threshold_uncertainty_score":0.8579154},"labels":[],"label_agreement":null},{"id":"W2095643008","doi":"10.1016/j.jcv.2013.02.004","title":"Virology and clinical sequelae of long-term antiviral therapy in a North American cohort of hepatitis B virus (HBV)/human immunodeficiency virus type 1 (HIV-1) co-infected patients","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Virology; Hepatitis B virus; HBeAg; Hepatitis B; Medicine; Coinfection; Genotyping; Liver disease; Cirrhosis; Genotype; Virus; Biology; Gastroenterology; HBsAg; Gene","score_opus":0.043606729996378935,"score_gpt":0.3959800577911882,"score_spread":0.3523733277948093,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095643008","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980596,0.0003748232,0.000026436579,0.00021377316,0.00046252736,0.0006510257,0.000044889577,0.000013912799,0.00015303506],"genre_scores_gemma":[0.9826246,0.01601865,0.00022573431,0.000859971,0.00018412693,0.000008628233,0.000026192809,0.000039157447,0.00001295641],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99250793,0.0013018129,0.0047694207,0.00044181437,0.00047124058,0.00050775986],"domain_scores_gemma":[0.9935486,0.0017114431,0.0031233246,0.00045375872,0.00092757103,0.00023530108],"candidate_categories":["metaepi_narrow","sts"],"consensus_categories":[],"category_scores_codex":[0.0017374199,0.00033623326,0.0031448384,0.00040470538,0.00006271476,0.000009012028,0.000317363,0.0003860545,0.00019495205],"category_scores_gemma":[0.0025566583,0.0002644671,0.00046904568,0.00046441564,0.0027144242,0.00018101204,0.00016481963,0.0013366239,0.000040985284],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002073134,0.003042877,0.9642908,0.000032014454,0.00062785513,0.00012610445,0.00011256878,0.0000011771499,0.0032977136,0.000006200129,0.00020316911,0.026186416],"study_design_scores_gemma":[0.0065051424,0.02492685,0.9676871,0.00005695488,0.00020566628,0.00004965708,0.000006311676,0.000039822346,0.00021711743,0.000029413664,0.000090664216,0.000185308],"about_ca_topic_score_codex":0.00428817,"about_ca_topic_score_gemma":0.00864229,"teacher_disagreement_score":0.026001107,"about_ca_system_score_codex":0.000052345833,"about_ca_system_score_gemma":0.00025782463,"threshold_uncertainty_score":0.99999964},"labels":[],"label_agreement":null},{"id":"W2095922257","doi":"10.1016/j.jcv.2009.01.009","title":"Murine host responses to respiratory syncytial virus (RSV) following intranasal administration of a Protollin-adjuvanted, epitope-enhanced recombinant G protein vaccine","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Respiratory viral infections research","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"GlaxoSmithKline (Canada); Dalhousie University","funders":"","keywords":"Epitope; Adjuvant; Nasal administration; Recombinant DNA; Virology; Immunogenicity; Medicine; Virus; Immunology; Antibody; Biology; Gene","score_opus":0.08231210294755249,"score_gpt":0.4707163987519248,"score_spread":0.3884042958043723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095922257","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.989692,0.00023195971,0.001722733,0.005471595,0.0006974875,0.0019332245,0.0000051267752,0.000028286728,0.00021763743],"genre_scores_gemma":[0.99530196,0.000085586136,0.0015585482,0.0017930812,0.00097101106,0.000048397556,0.0000015912756,0.000031183412,0.00020861404],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9931113,0.0014244555,0.0037991265,0.00042719787,0.000749476,0.0004884376],"domain_scores_gemma":[0.9960712,0.0007857308,0.0012486422,0.0005425477,0.00077394175,0.00057793205],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0055710003,0.00028232756,0.0017310398,0.0007315324,0.00010293031,0.0000247084,0.0003493208,0.00048014132,0.00016024472],"category_scores_gemma":[0.011773949,0.0002215304,0.0006835527,0.0006273119,0.0001377269,0.00026318597,0.000065771696,0.001560958,0.000038023056],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.076053135,0.0025529973,0.009541976,0.00007096714,0.0002796414,0.0016230523,0.000055990673,0.000014385196,0.87506837,0.00009152785,0.00062783755,0.034020133],"study_design_scores_gemma":[0.016720122,0.13430946,0.44858858,0.0007627265,0.00028773487,0.00044514003,0.00004719109,0.00006247602,0.38327906,0.000464362,0.014666642,0.00036651193],"about_ca_topic_score_codex":0.00001128238,"about_ca_topic_score_gemma":0.000039409533,"teacher_disagreement_score":0.49178928,"about_ca_system_score_codex":0.00010903876,"about_ca_system_score_gemma":0.0013257326,"threshold_uncertainty_score":0.9965503},"labels":[],"label_agreement":null},{"id":"W2096545705","doi":"10.1016/j.jcv.2014.04.005","title":"The need for a sequencing-based assay to supplement the Abbott m2000 RealTime HCV Genotype II assay: A 1 year analysis","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Hepatitis C virus research","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Calgary; Provincial Laboratory of Public Health","funders":"Bayer HealthCare","keywords":"Genotype; NS5B; Genotyping; Biology; Virology; Hepacivirus; Genetics; Gene","score_opus":0.0929378863284908,"score_gpt":0.4541485159564408,"score_spread":0.36121062962795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2096545705","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6302924,0.00016620371,0.07129128,0.29336134,0.0009187376,0.0016101719,0.00006261143,0.000029788414,0.002267454],"genre_scores_gemma":[0.9794896,0.00009292268,0.0066585983,0.011735616,0.0013123266,0.000033814318,0.000010333135,0.000029514094,0.00063723844],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9946307,0.0019892477,0.0017955193,0.00026128808,0.00076318166,0.0005600429],"domain_scores_gemma":[0.9882527,0.009255657,0.00065271393,0.0006709434,0.0006811937,0.00048681608],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.023467422,0.00015987857,0.0010104945,0.00025918373,0.00030170535,0.000035410194,0.00053454,0.00025299727,0.00052043586],"category_scores_gemma":[0.017739767,0.00008218183,0.0008429641,0.0005044851,0.00025241842,0.000034645665,0.00011413853,0.0010101555,0.00008079598],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.028007267,0.0014690498,0.45241317,0.000087391934,0.010518323,0.00024575318,0.00079937064,0.0042494293,0.0040173656,0.0038235495,0.22771992,0.2666494],"study_design_scores_gemma":[0.005418692,0.012578924,0.07309441,0.000025736068,0.0016282945,0.000017350583,0.00007063524,0.028281773,0.00013456265,0.00088166766,0.87772393,0.00014402055],"about_ca_topic_score_codex":0.000110365916,"about_ca_topic_score_gemma":0.00069980073,"teacher_disagreement_score":0.650004,"about_ca_system_score_codex":0.00014634531,"about_ca_system_score_gemma":0.0009803015,"threshold_uncertainty_score":0.99053425},"labels":[],"label_agreement":null},{"id":"W2097024048","doi":"10.1016/j.jcv.2015.08.020","title":"Association of age and gender with Torque teno virus detection in stools from diarrheic and non-diarrheic people","year":2015,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Chinook Regional Hospital; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Alberta Livestock and Meat Agency; University of Lethbridge","keywords":"Torque teno virus; Enteritis; Virology; Virus; Medicine; Diarrhea; Feces; Genotype; Biology; Internal medicine; Microbiology; Gene; Genetics","score_opus":0.06631925591704431,"score_gpt":0.3155310866672728,"score_spread":0.2492118307502285,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2097024048","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987816,0.00029282263,0.000044542867,0.0005009514,0.0001716163,0.00007546867,0.000009199806,0.0000055561227,0.00011823547],"genre_scores_gemma":[0.9988912,0.00052483496,0.00012907742,0.00013812887,0.000298091,0.000002388424,9.842662e-7,0.0000010271111,0.00001427024],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998637,0.00029708465,0.0006279461,0.00014570629,0.00015653773,0.00013571388],"domain_scores_gemma":[0.9977232,0.0013795358,0.0006293099,0.000027275712,0.00013932769,0.00010130942],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00128686,0.000089507244,0.00048184514,0.000025376285,0.000048368,0.000013738891,0.00006728871,0.0002057109,0.000018196375],"category_scores_gemma":[0.0010954962,0.000035977893,0.000060952018,0.00013715248,0.00011243838,0.00012645508,0.000053854354,0.00032726824,0.0000024267406],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00058997015,0.00014879575,0.9630396,0.000003010773,0.00010207286,0.000019804209,0.00032861627,0.000008223331,0.023405371,0.000007696279,0.00012130479,0.012225548],"study_design_scores_gemma":[0.000769651,0.0021878236,0.99469876,0.000007667173,0.000056469373,0.000016282876,0.00021666853,0.00003699714,0.00025858008,0.0011072466,0.0005761371,0.00006772011],"about_ca_topic_score_codex":0.00057791284,"about_ca_topic_score_gemma":0.020408422,"teacher_disagreement_score":0.03165917,"about_ca_system_score_codex":0.000034678633,"about_ca_system_score_gemma":0.000016889177,"threshold_uncertainty_score":0.99746656},"labels":[],"label_agreement":null},{"id":"W2102474022","doi":"10.1016/s1386-6532(03)00114-8","title":"Evaluation of a convenient enzyme immunoassay to assess the quality of genital specimens submitted for the detection of human papillomavirus DNA by consensus PCR","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Dig; Molecular biology; Immunoassay; Biology; Amplicon; Southern blot; DNA; Chemistry; Polymerase chain reaction; Antibody; Gene; Genetics","score_opus":0.37260918598377213,"score_gpt":0.5464603570103521,"score_spread":0.17385117102658,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2102474022","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99356186,0.0009404251,0.0009776442,0.003262088,0.00031824296,0.0006971416,0.00003077924,0.000002164485,0.00020964562],"genre_scores_gemma":[0.999203,0.000085332824,0.000056467932,0.00033048802,0.00028063526,0.000013689743,0.0000023710268,0.0000098257,0.000018165221],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99526256,0.0011522556,0.0021684575,0.00014045143,0.0010871352,0.00018915918],"domain_scores_gemma":[0.99174196,0.004203777,0.0012376393,0.00031265008,0.002386112,0.00011784791],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.016598834,0.000097122575,0.00081359467,0.0000781869,0.000063838226,0.0000041768812,0.00021685545,0.00017514963,0.00028404704],"category_scores_gemma":[0.0075452738,0.00005371686,0.00047511962,0.00016124937,0.0005460518,0.000020735124,0.0000527518,0.00051853823,0.0000016396817],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.014723032,0.0014077189,0.0065054195,0.00010264635,0.0010690939,0.000004114084,0.00035038783,0.00013813596,0.93717873,0.0005104385,0.0003198972,0.03769036],"study_design_scores_gemma":[0.013310791,0.009499725,0.8419179,0.00002360747,0.0009020295,0.000038700407,0.0003694062,0.00019038293,0.1307117,0.0021251058,0.0008418702,0.00006880683],"about_ca_topic_score_codex":0.00017456168,"about_ca_topic_score_gemma":0.00021886686,"teacher_disagreement_score":0.83541244,"about_ca_system_score_codex":0.00009966797,"about_ca_system_score_gemma":0.00048789542,"threshold_uncertainty_score":0.9032942},"labels":[],"label_agreement":null},{"id":"W2105325668","doi":"10.1016/j.jcv.2014.01.019","title":"Comparative evaluation of Roche's COBAS Ampliprep/COBAS TaqMan HIV-1 Test v2.0 and Abbott's RealTime m2000sp/rt HIV-1 assay on PPTs and EDTA samples","year":2014,"lang":"en","type":"letter","venue":"Journal of Clinical Virology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Provincial Laboratory of Public Health","funders":"","keywords":"Human immunodeficiency virus (HIV); Virology; Medicine; TaqMan; Chemistry; Real-time polymerase chain reaction","score_opus":0.1636030532780318,"score_gpt":0.4285885635434926,"score_spread":0.2649855102654608,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2105325668","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6228971,0.009699765,0.0006894913,0.3566113,0.002015169,0.001916392,0.0016878977,0.000042567146,0.004440298],"genre_scores_gemma":[0.92487186,0.0024166633,0.00060720387,0.0652708,0.0025221591,0.000045339555,0.0018413408,0.00007736164,0.002347265],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9904323,0.0055391504,0.0023293719,0.00067774334,0.00037678008,0.0006446272],"domain_scores_gemma":[0.9833714,0.012745048,0.002435366,0.00054036477,0.0007491185,0.00015870725],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.0067269136,0.00051063515,0.0026733289,0.0003815908,0.00017154866,0.000029378418,0.0004359323,0.0020879,0.00073552545],"category_scores_gemma":[0.0036251438,0.00037771097,0.00039706583,0.00009222731,0.0016322272,0.00009954668,0.00017160954,0.003908016,0.0005133182],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021327797,0.00088743167,0.038877502,0.00008589228,0.0022997402,0.00016063236,0.00017232457,0.000016764894,0.0018339148,0.000046569992,0.94309217,0.010394255],"study_design_scores_gemma":[0.012796464,0.011322835,0.16665514,0.00029125513,0.0016486713,0.0010383556,0.000043255146,0.000059281465,0.00048790683,0.0014117715,0.80378217,0.0004628778],"about_ca_topic_score_codex":0.00004505793,"about_ca_topic_score_gemma":0.000059698414,"teacher_disagreement_score":0.30197474,"about_ca_system_score_codex":0.0000863932,"about_ca_system_score_gemma":0.0005074091,"threshold_uncertainty_score":0.9998675},"labels":[],"label_agreement":null},{"id":"W2106066931","doi":"10.1016/s1386-6532(07)70007-0","title":"Principles of the xTAG™ respiratory viral panel assay (RVP Assay)","year":2007,"lang":"en","type":"review","venue":"Journal of Clinical Virology","topic":"Respiratory viral infections research","field":"Medicine","cited_by":95,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Luminex (Canada)","funders":"","keywords":"Genotyping; Virology; Assay sensitivity; Molecular diagnostics; Oligonucleotide; Multiplex; Roche Diagnostics; Nucleic Acid Amplification Tests; Biology; Computational biology; Medicine; Genotype; Bioinformatics; Genetics; DNA; Pathology; Gene","score_opus":0.5799364692972881,"score_gpt":0.5810607508331379,"score_spread":0.0011242815358497582,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106066931","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0032184822,0.98412865,0.00018534815,0.0003311026,0.0025231233,0.0009465894,0.00001792295,0.000017338913,0.00863141],"genre_scores_gemma":[0.00047666405,0.9919426,0.000282354,0.0015855613,0.0036868837,0.000013788786,0.0000027846809,0.000099939214,0.0019094641],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.98329395,0.0064287777,0.007862625,0.0004682688,0.0013300172,0.000616344],"domain_scores_gemma":[0.9835888,0.007703142,0.0059696664,0.0012940195,0.00093054125,0.00051381276],"candidate_categories":["metaresearch","metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.026719887,0.0005013987,0.0056406367,0.00084327237,0.000110317116,0.000021098353,0.0011519593,0.002105458,0.00036749523],"category_scores_gemma":[0.02523647,0.00027361207,0.003924628,0.0007347411,0.0014138081,0.00011592776,0.00046147758,0.006943167,0.00012941945],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005759779,0.0010073893,0.009003267,0.0037866198,0.001409212,0.0005051012,0.000008741584,0.000004579511,0.000040833576,0.00073109614,0.002807734,0.98011947],"study_design_scores_gemma":[0.0013874047,0.0033204053,0.0100998,0.0034105596,0.0015295002,0.00075991126,0.000004567984,0.000003874098,0.000016166876,0.000056630866,0.97922236,0.00018884624],"about_ca_topic_score_codex":0.000005545379,"about_ca_topic_score_gemma":0.000010630461,"teacher_disagreement_score":0.9799306,"about_ca_system_score_codex":0.00022452309,"about_ca_system_score_gemma":0.0036801978,"threshold_uncertainty_score":0.9999716},"labels":[],"label_agreement":null},{"id":"W2108150340","doi":"10.1016/j.jcv.2010.10.008","title":"Analytical performance of norovirus real-time RT-PCR detection protocols in Canadian laboratories","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"St. Paul's Hospital; McMaster University; Provincial Laboratory of Public Health; Université Laval; Queen Elizabeth II Health Sciences Centre; BC Centre for Disease Control; Agriculture and Agri-Food Canada; Ste. Anne's Hospital; Public Health Agency of Canada; Saskatchewan Disease Control Laboratory; Health Canada","funders":"","keywords":"Norovirus; Multiplex; Real-time polymerase chain reaction; Detection limit; Virology; Biology; Reverse transcription polymerase chain reaction; Molecular diagnostics; Computational biology; Molecular biology; Chromatography; Gene; Outbreak; Chemistry; Genetics; Messenger RNA","score_opus":0.05134969144981813,"score_gpt":0.4460116690237713,"score_spread":0.39466197757395316,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2108150340","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99611634,0.0000068526206,0.000006845302,0.0022468078,0.00024331213,0.0007978112,0.000006217469,0.000003715723,0.00057208503],"genre_scores_gemma":[0.9981208,0.00013111321,0.0005645629,0.00048223807,0.0005692405,0.000046398938,0.0000015350589,0.000009737887,0.000074365154],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9971826,0.00032263287,0.0016719926,0.00015015157,0.00019703199,0.0004756081],"domain_scores_gemma":[0.9980025,0.00026664845,0.00045863545,0.00019914545,0.00038007414,0.0006929532],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0036549869,0.0001002224,0.0009834431,0.0003048341,0.000026392445,0.0000047747285,0.00016761463,0.0003727847,0.00027743896],"category_scores_gemma":[0.007177469,0.000076474855,0.00017275219,0.00020580935,0.00045221907,0.00010423541,0.000029262668,0.0015195992,0.000027776863],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0045323004,0.0001851877,0.96215415,0.00003469073,0.0000480932,0.0002145046,0.000010153,0.0000065447957,0.024488265,0.000048254915,0.00035479685,0.007923085],"study_design_scores_gemma":[0.0024878813,0.009727631,0.9754265,0.000052638687,0.00002382155,0.0003664447,0.000006713566,0.0015961525,0.0005140008,0.00009470654,0.009654374,0.00004913614],"about_ca_topic_score_codex":0.005911836,"about_ca_topic_score_gemma":0.062329464,"teacher_disagreement_score":0.05641763,"about_ca_system_score_codex":0.000049922113,"about_ca_system_score_gemma":0.00082564465,"threshold_uncertainty_score":0.9547806},"labels":[],"label_agreement":null},{"id":"W2108354057","doi":"10.1016/j.jcv.2003.11.006","title":"Evaluation of rubella IgM enzyme immunoassays","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":64,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. John’s Health Sciences Centre; Health Canada; Manitoba Health","funders":"World Health Organization","keywords":"Rubella; Virology; Medicine; Measles; Vaccination","score_opus":0.1744062818175307,"score_gpt":0.4866110239672576,"score_spread":0.3122047421497269,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2108354057","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98733383,0.002831625,0.0002041344,0.001388261,0.0008151832,0.00012175963,0.0000020244645,0.000004413478,0.007298789],"genre_scores_gemma":[0.99758035,0.00039371598,0.00037014717,0.0012592913,0.00029551476,0.0000015258084,0.0000013942761,0.000009154087,0.00008889864],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9959295,0.001678897,0.0015610964,0.00012709307,0.000534814,0.0001686392],"domain_scores_gemma":[0.99721056,0.0007339078,0.0009208874,0.00022302303,0.0007433749,0.00016824508],"candidate_categories":["metaresearch","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.009193137,0.00009859536,0.00077283336,0.000112429574,0.000028302122,0.0000018840936,0.00010635219,0.00033155477,0.0012001008],"category_scores_gemma":[0.01140573,0.00007209975,0.0004489599,0.0000893728,0.000297097,0.0000626263,0.000016633167,0.0005517016,0.00004075967],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011316969,0.009328176,0.7973633,0.00011945431,0.003489624,0.00045791076,0.00018152148,0.00049414067,0.03764633,0.012411338,0.015977057,0.11121422],"study_design_scores_gemma":[0.014267681,0.009071951,0.92968017,0.00006605193,0.0037296372,0.0006018151,0.00005114799,0.00045708273,0.0021901065,0.023826305,0.015930565,0.00012747731],"about_ca_topic_score_codex":0.0000015187874,"about_ca_topic_score_gemma":0.0000015831042,"teacher_disagreement_score":0.13231692,"about_ca_system_score_codex":0.000020086647,"about_ca_system_score_gemma":0.0006314372,"threshold_uncertainty_score":0.99971294},"labels":[],"label_agreement":null},{"id":"W2108956820","doi":"10.1016/j.jcv.2008.07.013","title":"Human papillomavirus type 16 (HPV-16) viral load and persistence of HPV-16 infection in women infected or at risk for HIV","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital; Health Sciences Centre; Sunnybrook Health Science Centre; University of Toronto; Institut National de Santé Publique du Québec; University of British Columbia; McGill University; Centre Hospitalier de l’Université de Montréal; Université de Montréal","funders":"Styrelsen för Internationellt Utvecklingssamarbete","keywords":"Viral load; HPV infection; Persistence (discontinuity); Cervix; Medicine; Odds ratio; Sex organ; Internal medicine; Viral disease; Confidence interval; Coinfection; Immunology; Virology; Papillomaviridae; Cervical cancer; Virus; Biology; Cancer","score_opus":0.1234448949869022,"score_gpt":0.4367844047738098,"score_spread":0.3133395097869076,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2108956820","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964402,0.00045756876,0.00006236492,0.0005459453,0.00018507693,0.00023328543,0.000007962476,0.0000072198623,0.0020604196],"genre_scores_gemma":[0.99405426,0.0040294053,0.00006922201,0.0006381443,0.00050903106,0.000007595031,0.0000037099762,0.000015314034,0.000673333],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974944,0.0003206803,0.0012919499,0.00022278148,0.00032864866,0.00034152993],"domain_scores_gemma":[0.99752474,0.0009417819,0.0005713245,0.0001737905,0.00048108102,0.00030725615],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0017854917,0.00013216164,0.0009779697,0.00018682939,0.00009442348,0.0000046427263,0.00010304247,0.00032768134,0.0035486682],"category_scores_gemma":[0.003362078,0.00009303878,0.00023750184,0.00019667664,0.0004751159,0.00008518103,0.00009243104,0.0008727753,0.000011042258],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.033991475,0.0007859068,0.9069889,0.00014921968,0.00021656086,0.00010246124,0.00028915383,0.000009353408,0.0007336024,0.000019279796,0.0033950037,0.05331904],"study_design_scores_gemma":[0.010782346,0.013882239,0.96015626,0.000014165284,0.00009814732,0.00027455844,0.00003816825,0.00004562451,0.0001505893,0.00055704504,0.0139128,0.00008804968],"about_ca_topic_score_codex":0.00018528482,"about_ca_topic_score_gemma":0.0009715233,"teacher_disagreement_score":0.05323099,"about_ca_system_score_codex":0.0004352459,"about_ca_system_score_gemma":0.00038456306,"threshold_uncertainty_score":0.9973622},"labels":[],"label_agreement":null},{"id":"W2109724580","doi":"10.1016/j.jcv.2008.10.001","title":"Differential patterns of amantadine-resistance in influenza A (H3N2) and (H1N1) isolates in Toronto, Canada","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto; Mount Sinai Hospital; Toronto Public Health","funders":"","keywords":"Amantadine; Virology; Point mutation; Influenza A virus; Biology; Typing; Virus; Microbiology; Mutation; Drug resistance; Gene; Genetics","score_opus":0.09572957287101262,"score_gpt":0.4347262386560662,"score_spread":0.33899666578505355,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109724580","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953873,0.0031245062,0.000012932191,0.0008532491,0.0001806739,0.00012372868,0.000008965493,0.000001831246,0.00030677952],"genre_scores_gemma":[0.9948308,0.003546901,0.00013108934,0.0012162563,0.00019598761,0.000002370701,4.158295e-7,0.000009821663,0.00006637206],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99711806,0.00025488087,0.0018271763,0.0001659851,0.00031734564,0.00031657156],"domain_scores_gemma":[0.9979479,0.00104411,0.00050594966,0.00014972257,0.00017391023,0.00017841169],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00062918954,0.0001328084,0.0011833161,0.00011917205,0.00002566677,0.0000023834768,0.00013872812,0.00016295743,0.00016256426],"category_scores_gemma":[0.0019559166,0.00010065279,0.000115024246,0.00007669136,0.00026491846,0.000097525306,0.00009064965,0.00072876236,5.7430736e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003320031,0.00026825734,0.99342096,0.00007509931,0.00011732882,0.00065742095,0.00022920751,0.0000042283555,0.0007890705,0.00004819197,0.0004432837,0.0006269125],"study_design_scores_gemma":[0.0062367185,0.0009267051,0.98930997,0.00014548242,0.0000289179,0.00008481978,0.00010779139,0.000040227405,0.00010428303,0.000063599895,0.002879488,0.00007197466],"about_ca_topic_score_codex":0.11198843,"about_ca_topic_score_gemma":0.80274135,"teacher_disagreement_score":0.69075286,"about_ca_system_score_codex":0.00018031697,"about_ca_system_score_gemma":0.0005849263,"threshold_uncertainty_score":0.8939249},"labels":[],"label_agreement":null},{"id":"W2111226841","doi":"10.1016/j.jcv.2014.08.027","title":"Interferon lambda 3 genotype predicts hepatitis C virus RNA levels in early acute infection among people who inject drugs: The InC3 Study","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Hepatitis C virus research","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"National Institute of Allergy and Infectious Diseases; National Institute on Drug Abuse; National Institutes of Health; National Institute of Diabetes and Digestive and Kidney Diseases; Australian Government","keywords":"Hepatitis C virus; Genotype; Medicine; Odds ratio; Hepatitis C; Hepacivirus; Immunology; Internal medicine; Interferon; Virology; Gastroenterology; Virus; Biology; Gene","score_opus":0.054040095520242394,"score_gpt":0.4074046565131971,"score_spread":0.3533645609929547,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111226841","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996042,0.000062469415,0.00044668812,0.001246755,0.00093908404,0.00064680015,0.0000064672477,0.00003701858,0.000572696],"genre_scores_gemma":[0.99614465,0.0015604943,0.0000606877,0.0009369386,0.0011015893,0.000020153508,0.0000014134289,0.00005955513,0.000114540286],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99341273,0.0027880548,0.002220054,0.00032985955,0.0007712042,0.00047810518],"domain_scores_gemma":[0.9958381,0.0021320165,0.00081175455,0.00048667347,0.00040730054,0.00032417566],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0072560427,0.00022378581,0.0013360231,0.0004091229,0.000095168245,0.000044619417,0.00039071377,0.00040524642,0.00010187998],"category_scores_gemma":[0.0052145757,0.00014929328,0.00030910491,0.00044509486,0.00032619224,0.0002826185,0.0002549027,0.0026610314,0.000108505265],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017306537,0.00078966835,0.9638514,0.000017178434,0.0003786775,0.00021299119,0.0023837318,0.000021301965,0.00023233623,0.000010798724,0.0006041713,0.029767081],"study_design_scores_gemma":[0.00487545,0.01939628,0.97270447,0.000113151196,0.00017624881,0.00006450053,0.000052285544,0.00093304116,0.000118838456,0.00017186956,0.0012809518,0.000112940244],"about_ca_topic_score_codex":0.004664729,"about_ca_topic_score_gemma":0.021682426,"teacher_disagreement_score":0.029654142,"about_ca_system_score_codex":0.00012743413,"about_ca_system_score_gemma":0.00030919415,"threshold_uncertainty_score":0.99963987},"labels":[],"label_agreement":null},{"id":"W2121062581","doi":"10.1016/j.jcv.2004.08.019","title":"Hepatitis C virus (HCV) 5′NC sequence variants and their association with hepatitis C risk groups","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Hepatitis C virus research","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hassle Free Clinic","funders":"Fogarty International Center; National Institute of Allergy and Infectious Diseases","keywords":"NS5B; Virology; Genotype; Hepatitis C virus; Hepatitis C; Biology; Hepacivirus; Population; Virus; Viral disease; Medicine; Genetics; Gene","score_opus":0.058636924245363355,"score_gpt":0.38784208127341313,"score_spread":0.32920515702804976,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121062581","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99139863,0.0002604472,0.002554143,0.004328569,0.0003758853,0.000225635,0.000056947374,0.000019519308,0.00078023627],"genre_scores_gemma":[0.9732271,0.021478329,0.0027832584,0.0017491917,0.00064100046,0.0000055355163,0.0000052104547,0.000031590575,0.00007881262],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99633276,0.00078688376,0.0014821482,0.00030760138,0.00063820387,0.00045241267],"domain_scores_gemma":[0.9955998,0.0017244623,0.0013232405,0.00027523108,0.00057280395,0.00050444895],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003709268,0.00020602508,0.0011137323,0.00018858712,0.00011456392,0.000032953296,0.00019010248,0.00047850463,0.00019310757],"category_scores_gemma":[0.006871834,0.00014008189,0.0002195162,0.00023219384,0.00032643566,0.00026976885,0.000075222306,0.0017889909,0.000063060485],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007363156,0.000319145,0.96209383,0.000017152488,0.00041958006,0.000802545,0.00017623261,0.000023613798,0.0010689646,0.00013990751,0.000288867,0.03391385],"study_design_scores_gemma":[0.005905232,0.0070096687,0.9783799,0.00011763532,0.00017470482,0.00041153506,0.00001326356,0.00023532123,0.00038223856,0.003276965,0.0039516883,0.00014186889],"about_ca_topic_score_codex":0.0026262323,"about_ca_topic_score_gemma":0.0038035745,"teacher_disagreement_score":0.03377198,"about_ca_system_score_codex":0.00027000334,"about_ca_system_score_gemma":0.00065507065,"threshold_uncertainty_score":0.8226723},"labels":[],"label_agreement":null},{"id":"W2121388214","doi":"10.1016/j.jcv.2010.06.015","title":"Transmission of pandemic influenza A (H1N1) 2009 within households: Edmonton, Canada","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Provincial Laboratory of Public Health; Alberta Health Services; University of Alberta","funders":"Alberta Health Services","keywords":"Pandemic; Transmission (telecommunications); Attack rate; Medicine; Demography; Capital city; Public health; Environmental health; Coronavirus disease 2019 (COVID-19); Geography; Disease; Infectious disease (medical specialty); Population; Internal medicine; Telecommunications","score_opus":0.1436775725475237,"score_gpt":0.4626047383509276,"score_spread":0.31892716580340386,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121388214","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99510825,0.001186985,0.00007218563,0.002174359,0.0007259417,0.00016574505,0.00000957825,0.000009995311,0.00054694526],"genre_scores_gemma":[0.99015087,0.0007631392,0.0018187792,0.006316247,0.0007761037,0.0000021685105,5.609898e-7,0.000023129605,0.00014898292],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9957912,0.00030286287,0.0026081384,0.00019169829,0.00074081623,0.00036530613],"domain_scores_gemma":[0.99599135,0.0013973772,0.0011433928,0.00031268224,0.0006552426,0.00049995974],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0036067162,0.00017191723,0.001298649,0.00012335912,0.00005632725,0.0000046337973,0.00029317476,0.0004057168,0.00018763957],"category_scores_gemma":[0.0059789256,0.00011427268,0.00032863283,0.00015327419,0.0005007328,0.00008906957,0.00005831633,0.0025850334,0.0000048538],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011229968,0.0007593546,0.8409654,0.0001630208,0.0008193711,0.0006625756,0.00036314476,0.00010206503,0.08935632,0.00010479645,0.02177181,0.033702176],"study_design_scores_gemma":[0.0077213547,0.0033519424,0.7681856,0.00013438793,0.00024856254,0.00048320967,0.00006737859,0.00011339603,0.001892221,0.00041408255,0.21724375,0.00014407645],"about_ca_topic_score_codex":0.013121282,"about_ca_topic_score_gemma":0.053481042,"teacher_disagreement_score":0.19547194,"about_ca_system_score_codex":0.00004280057,"about_ca_system_score_gemma":0.0026869902,"threshold_uncertainty_score":0.99971604},"labels":[],"label_agreement":null},{"id":"W2122069343","doi":"10.1016/j.jcv.2010.01.009","title":"Incidence and characterization of cytomegalovirus resistance mutations among pediatric solid organ transplant patients who received valganciclovir prophylaxis","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier universitaire de Québec","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Valganciclovir; Ganciclovir; Cytomegalovirus; Human cytomegalovirus; Medicine; Virology; Drug resistance; Betaherpesvirinae; Incidence (geometry); Resistance mutation; Immunology; Virus; Internal medicine; Biology; Herpesviridae; Viral disease; Polymerase chain reaction; Reverse transcriptase; Genetics; Gene","score_opus":0.02209996059799453,"score_gpt":0.3476481801279648,"score_spread":0.32554821952997026,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122069343","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983886,0.000072242,0.00015923232,0.0004814562,0.00041578425,0.00031801924,0.000039484672,0.0000085531465,0.00011666726],"genre_scores_gemma":[0.9973245,0.0012624275,0.00041619936,0.00018764246,0.00059160433,0.0000044119074,0.000014135743,0.000024665618,0.00017436451],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99676335,0.00026451185,0.0019012758,0.00026371412,0.0005265498,0.00028059722],"domain_scores_gemma":[0.9965831,0.000698093,0.0012169672,0.00024826106,0.00087710185,0.00037644425],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016437566,0.00016224968,0.0009470542,0.00035795837,0.00008551431,0.000018960724,0.0002003147,0.00040773017,0.00014468755],"category_scores_gemma":[0.0020702826,0.00012746228,0.00020412555,0.00036607357,0.0004932566,0.00025956228,0.00004315501,0.0014678228,0.000010802726],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002620015,0.0005088731,0.92041826,0.00011800591,0.00007347275,0.00007752596,0.0002876746,6.801866e-7,0.069975026,0.000024535235,0.000039987503,0.005855954],"study_design_scores_gemma":[0.003092362,0.0021142506,0.9906947,0.000056748177,0.00015819882,0.000036795023,0.000008096296,0.000055935183,0.0025905736,0.0001293387,0.00095727976,0.00010573927],"about_ca_topic_score_codex":0.000013875967,"about_ca_topic_score_gemma":0.00015090973,"teacher_disagreement_score":0.07027643,"about_ca_system_score_codex":0.00002118256,"about_ca_system_score_gemma":0.0004004209,"threshold_uncertainty_score":0.63770413},"labels":[],"label_agreement":null},{"id":"W2122156703","doi":"10.1016/s1386-6532(10)70004-4","title":"Prevention strategies for herpes zoster and post-herpetic neuralgia","year":2010,"lang":"en","type":"review","venue":"Journal of Clinical Virology","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Hôpital du Saint-Sacrement","funders":"National Institute of Diabetes and Digestive and Kidney Diseases","keywords":"Varicella zoster virus; Medicine; Neuralgia; Immunosenescence; Vaccination; Immunity; Immunology; Virus; Virology; Immune system; Neuropathic pain; Pharmacology","score_opus":0.16117447915984282,"score_gpt":0.5247465320542305,"score_spread":0.36357205289438765,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122156703","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.017436864,0.97921556,0.00019058361,0.00046751375,0.0016238154,0.0007375768,0.00001624772,0.000010640552,0.00030117002],"genre_scores_gemma":[0.0007795193,0.9960079,0.0011926717,0.00029532856,0.0011040674,0.000023691984,0.000014707767,0.00003773657,0.0005443867],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.997172,0.00031607173,0.0019681377,0.00022744178,0.00011849582,0.00019784736],"domain_scores_gemma":[0.99668896,0.0012568084,0.001401103,0.00020589094,0.00023576005,0.00021146136],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009974864,0.00025449853,0.0025427726,0.00017158901,0.00005149093,0.000031219228,0.00008997403,0.00093491457,0.00012979591],"category_scores_gemma":[0.00062618696,0.00015574832,0.001249776,0.000060392238,0.00018461313,0.0001068496,0.00003248128,0.0010072301,0.000021149992],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020930367,0.00044685134,0.000071965726,0.0016052357,0.00058214343,0.000067100904,0.0000062320773,4.1729333e-8,7.7173786e-7,0.000092640345,0.00017384149,0.99674386],"study_design_scores_gemma":[0.0019918967,0.005110055,0.0011855814,0.0017495691,0.0043931194,0.0019376725,0.0000082173965,0.0000019791435,1.5833947e-7,0.0008946888,0.98262274,0.0001042913],"about_ca_topic_score_codex":0.0000028300306,"about_ca_topic_score_gemma":0.000012290405,"teacher_disagreement_score":0.9966396,"about_ca_system_score_codex":0.00001758837,"about_ca_system_score_gemma":0.0007629096,"threshold_uncertainty_score":0.7210917},"labels":[],"label_agreement":null},{"id":"W2123471134","doi":"10.1016/j.jcv.2014.06.021","title":"Discrepant HIV results resolved by human DNA testing","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Provincial Laboratory of Public Health; University of Alberta","funders":"","keywords":"Human immunodeficiency virus (HIV); Antibody; DNA; Medicine; RNA; Antigen; Virology; Immunology; Biology; Genetics; Gene","score_opus":0.0822213036489668,"score_gpt":0.39607249445186754,"score_spread":0.31385119080290075,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2123471134","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9862945,0.00061431376,0.00049981533,0.005410653,0.000634271,0.00010434695,0.00006659234,0.000023288412,0.0063521983],"genre_scores_gemma":[0.99617994,0.00007666887,0.0005122552,0.00043858538,0.00030577625,0.0000025212576,0.00006833472,0.000013619921,0.002402276],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99595493,0.0014843959,0.0017580506,0.00026239167,0.00007834968,0.0004618737],"domain_scores_gemma":[0.9948909,0.0036294677,0.0008664804,0.00030753686,0.00017431924,0.0001312547],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0035653734,0.00015197096,0.0007484144,0.00008978223,0.0001764816,0.000011933653,0.0003691325,0.00038081073,0.00020246166],"category_scores_gemma":[0.0075100856,0.00010198502,0.00026900286,0.00007868179,0.00050031097,0.00006437472,0.00010650492,0.0010266072,0.0007879189],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009482391,0.0029018524,0.091862164,0.000017972214,0.001481915,0.0002991417,0.00014283936,0.000012949645,0.4242889,0.00082890847,0.37089646,0.0977845],"study_design_scores_gemma":[0.019494079,0.015864465,0.1336519,0.000059309,0.0001707316,0.00049120747,0.000044393717,0.000018021981,0.0055474425,0.0018715876,0.82254,0.0002468449],"about_ca_topic_score_codex":0.000023824763,"about_ca_topic_score_gemma":0.000018511992,"teacher_disagreement_score":0.45164356,"about_ca_system_score_codex":0.000019659006,"about_ca_system_score_gemma":0.00009002887,"threshold_uncertainty_score":0.9999901},"labels":[],"label_agreement":null},{"id":"W2123912930","doi":"10.1016/s1386-6532(10)70003-2","title":"The impact of varicella zoster virus: Chronic pain","year":2010,"lang":"en","type":"review","venue":"Journal of Clinical Virology","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":60,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Medicine; Vaccination; Varicella zoster virus; Neuralgia; Virus; Quality of life (healthcare); Chickenpox; Immunology; Chronic pain; Pediatrics; Intensive care medicine; Neuropathic pain; Physical therapy; Anesthesia","score_opus":0.11811392296369037,"score_gpt":0.5309826821832851,"score_spread":0.41286875921959476,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2123912930","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0016024159,0.995453,0.00006691713,0.00012845802,0.0012718996,0.00033634517,0.000014012462,0.000005057156,0.0011218836],"genre_scores_gemma":[0.0007662181,0.99674827,0.00009187364,0.00010713175,0.0019001825,0.000006542416,0.000004546415,0.00003756349,0.00033766162],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9945576,0.0014991226,0.0032450417,0.00018631689,0.00021907572,0.00029284557],"domain_scores_gemma":[0.9894859,0.006397571,0.0031039217,0.0005246918,0.0002197032,0.0002682119],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00568706,0.00029949183,0.003445419,0.00016629857,0.00006992987,0.000012814484,0.00026971052,0.0011025863,0.0004907384],"category_scores_gemma":[0.0023633693,0.00012909765,0.0036716138,0.00017072931,0.00036704727,0.00003154627,0.00006018701,0.0027716875,0.00010304449],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015810478,0.00065826735,0.00039779025,0.0004061172,0.0023095382,0.00013737533,0.0000031254933,5.077273e-7,0.000001220989,0.000011969668,0.0015188666,0.9943971],"study_design_scores_gemma":[0.0012254863,0.0061437646,0.0009182975,0.001416838,0.0026328636,0.0009395389,7.0446436e-7,0.0000065591926,3.9102227e-7,0.00009989061,0.9865311,0.00008460178],"about_ca_topic_score_codex":0.000030891595,"about_ca_topic_score_gemma":0.000025468777,"teacher_disagreement_score":0.9943125,"about_ca_system_score_codex":0.0001363629,"about_ca_system_score_gemma":0.0020670046,"threshold_uncertainty_score":0.99952894},"labels":[],"label_agreement":null},{"id":"W2124955090","doi":"10.1016/j.jcv.2013.06.006","title":"Multiplex loop-mediated isothermal amplification (M-LAMP) assay for the detection of influenza A/H1, A/H3 and influenza B can provide a specimen-to-result diagnosis in 40min with single genome copy sensitivity","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Biosensors and Analytical Detection","field":"Engineering","cited_by":91,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; St. Joseph’s Healthcare Hamilton","funders":"","keywords":"Loop-mediated isothermal amplification; Amplicon; Multiplex; Virology; Materials science; Molecular biology; Biology; Polymerase chain reaction; DNA; Gene; Genetics","score_opus":0.042313422974908324,"score_gpt":0.29886353789441017,"score_spread":0.25655011491950186,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2124955090","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9825641,0.00011534126,0.015869936,0.0007752973,0.00014026102,0.00049230235,0.00001616247,0.000017229728,0.000009359269],"genre_scores_gemma":[0.9982396,0.00008185426,0.0007623222,0.00062443357,0.0002292633,0.000033065633,9.742029e-7,0.000023592891,0.0000049004957],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99804103,0.00023574158,0.0011561044,0.00017705576,0.00015248358,0.0002375699],"domain_scores_gemma":[0.99603575,0.0030268522,0.00041093948,0.00015428582,0.00022553348,0.0001466633],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013689294,0.00015395145,0.00050854374,0.00015589691,0.000041962652,0.0000273991,0.00008772751,0.00024781245,0.000011694082],"category_scores_gemma":[0.0017739135,0.000103543105,0.000108620385,0.00020949211,0.0001691122,0.00013032796,0.000020772344,0.0004620194,0.00000525046],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002468634,0.0005184534,0.10316191,0.00010217328,0.0003856853,0.000014303869,0.00035858102,0.034971293,0.759231,0.000018174052,0.000078016565,0.098691784],"study_design_scores_gemma":[0.0029503892,0.0019480508,0.90503055,0.000046889607,0.000103731196,0.00003369025,0.00008060636,0.072350286,0.012825191,0.00009536353,0.004344612,0.00019062574],"about_ca_topic_score_codex":0.00017507598,"about_ca_topic_score_gemma":0.0010503359,"teacher_disagreement_score":0.8018687,"about_ca_system_score_codex":0.00005420838,"about_ca_system_score_gemma":0.000026896412,"threshold_uncertainty_score":0.4222365},"labels":[],"label_agreement":null},{"id":"W2126958368","doi":"10.1016/s1386-6532(02)00091-4","title":"Diagnosis and treatment approaches of CMV infections in adult patients","year":2002,"lang":"en","type":"review","venue":"Journal of Clinical Virology","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":160,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"","keywords":"Medicine; Intensive care medicine; Virology","score_opus":0.36554323382499304,"score_gpt":0.48805865612673954,"score_spread":0.1225154223017465,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2126958368","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.05751859,0.94081765,0.0000013095841,0.00025512397,0.00021449548,0.00056954287,0.000024974299,0.000002574158,0.0005957534],"genre_scores_gemma":[0.0041706394,0.99514633,0.00008941784,0.0000613508,0.00037133257,0.00003712491,0.000006749744,0.000022822385,0.00009420508],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9961036,0.000549286,0.0026510693,0.00022401936,0.00025065764,0.00022140973],"domain_scores_gemma":[0.9959378,0.0022063174,0.0012200162,0.0002089,0.0001765009,0.00025041742],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007858991,0.00022295663,0.0036587599,0.00052720134,0.000021279327,0.0000059119493,0.000105422936,0.00064858084,0.00018762518],"category_scores_gemma":[0.0018114402,0.00013721528,0.00091973174,0.00022771276,0.00031596937,0.00004225059,0.000058491827,0.0010998603,0.000017323666],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014861234,0.003512584,0.09272193,0.0012623972,0.00044348752,0.000059884478,0.000030269744,2.12144e-7,1.6770906e-8,0.000019622237,0.00027259742,0.90152836],"study_design_scores_gemma":[0.0041508107,0.007921012,0.021554355,0.0026976927,0.0012087922,0.00014725524,0.0000085963275,0.000008216117,2.0257113e-7,0.000022620889,0.96217936,0.00010110914],"about_ca_topic_score_codex":0.00003911966,"about_ca_topic_score_gemma":0.00009060019,"teacher_disagreement_score":0.96190673,"about_ca_system_score_codex":0.00010242995,"about_ca_system_score_gemma":0.00028749183,"threshold_uncertainty_score":0.55954766},"labels":[],"label_agreement":null},{"id":"W2128176696","doi":"10.1016/j.jcv.2006.02.007","title":"Diversity of cutaneous human papillomavirus types in individuals with and without skin lesion","year":2006,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; McGill University; Centre Hospitalier de l’Université de Montréal","funders":"National Cancer Institute","keywords":"Actinic keratosis; Human papillomavirus; Typing; Polymerase chain reaction; Dermatology; Medicine; Skin cancer; Biology; Basal cell; Internal medicine; Virology; Pathology; Cancer; Microbiology; Genetics; Gene","score_opus":0.08525754321314195,"score_gpt":0.43533860306719424,"score_spread":0.3500810598540523,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2128176696","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99662626,0.00035059528,0.000014980998,0.00064621563,0.000036473775,0.0000807965,0.0000019794325,0.0000022777767,0.002240435],"genre_scores_gemma":[0.9989546,0.00022943883,0.00024286675,0.0002468369,0.00021821249,2.9067348e-7,9.138155e-7,0.000005820879,0.0001010365],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985666,0.00015735526,0.00069996493,0.00011716119,0.00031255887,0.00014631868],"domain_scores_gemma":[0.9990259,0.00031772058,0.00030423224,0.00009387163,0.0001421864,0.000116087765],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00089489453,0.00006946948,0.00065581483,0.0001310072,0.00005506974,0.0000029260837,0.000091381655,0.00015668529,0.00027989098],"category_scores_gemma":[0.00018434649,0.000045181227,0.00008398106,0.000089732835,0.00032307743,0.000035880134,0.00016283625,0.0005463869,0.0000017356123],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022169333,0.00034702182,0.9876624,0.000031785745,0.000050608243,0.00016654657,0.000052360632,0.0000073970155,0.00025950186,0.00010521709,0.00011750064,0.008982731],"study_design_scores_gemma":[0.00470275,0.004328662,0.9880353,0.000027656879,0.00008902396,0.00030309934,0.000018550827,0.00000892594,0.0001540223,0.0013237719,0.0009654658,0.000042736956],"about_ca_topic_score_codex":0.00024534465,"about_ca_topic_score_gemma":0.00043226694,"teacher_disagreement_score":0.008939994,"about_ca_system_score_codex":0.000016847456,"about_ca_system_score_gemma":0.00008087214,"threshold_uncertainty_score":0.306461},"labels":[],"label_agreement":null},{"id":"W2130746650","doi":"10.1016/s1386-6532(02)00134-8","title":"Assessment of precision and concordance of quantitative mitochondrial DNA assays: a collaborative international quality assurance study","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":50,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"AIDS Vancouver","funders":"","keywords":"Mitochondrial DNA; Nuclear DNA; Concordance; DNA; Biology; Coefficient of variation; Molecular biology; Concordance correlation coefficient; Quality assurance; Replicate; Genetics; Computational biology; Chemistry; Gene; Chromatography; Medicine; Statistics; External quality assessment; Mathematics; Pathology","score_opus":0.05810850636541708,"score_gpt":0.45084368419294435,"score_spread":0.39273517782752726,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2130746650","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9770947,0.00023139497,0.01837506,0.0001467722,0.0027854026,0.00022131753,0.000030031393,0.0000010871069,0.0011142427],"genre_scores_gemma":[0.9807776,0.00036617497,0.018375153,0.00012888339,0.00025312064,0.000004467948,0.0000042216325,0.0000070052038,0.00008333245],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99550194,0.0021632628,0.0017339516,0.0002500111,0.00024691623,0.00010394419],"domain_scores_gemma":[0.9959132,0.0010718381,0.0018616971,0.00019163339,0.0008827947,0.00007880399],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025086778,0.00011604042,0.00071452506,0.00006649228,0.000023888848,0.000005394379,0.00017888723,0.00022366755,0.000053478314],"category_scores_gemma":[0.007548529,0.00009416271,0.00016569633,0.00009185536,0.00029703614,0.000010772026,0.00005393594,0.0002586157,6.005653e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0052694273,0.001548045,0.36233708,0.000016539429,0.00055607496,0.0000147489845,0.00018855931,0.000114520575,0.6244049,0.003648122,0.0010382019,0.0008637918],"study_design_scores_gemma":[0.015885405,0.03139529,0.89560014,0.000050021285,0.00016364096,0.000095587726,0.0016041045,0.00006116525,0.02771606,0.0014101828,0.025748273,0.00027015305],"about_ca_topic_score_codex":0.000003763968,"about_ca_topic_score_gemma":0.000054009655,"teacher_disagreement_score":0.5966888,"about_ca_system_score_codex":0.000007202496,"about_ca_system_score_gemma":0.00034991425,"threshold_uncertainty_score":0.903684},"labels":[],"label_agreement":null},{"id":"W2131018426","doi":"10.1016/j.jcv.2014.09.002","title":"Can HPV vaccine have other health benefits more than cancer prevention? A systematic review of association between cervical HPV infection and preterm birth","year":2014,"lang":"en","type":"review","venue":"Journal of Clinical Virology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital; Lunenfeld-Tanenbaum Research Institute","funders":"","keywords":"Medicine; HPV infection; Cervical cancer; Meta-analysis; Odds ratio; Population; Observational study; Cohort study; Papillomaviridae; Gynecology; Oncology; Internal medicine; Prospective cohort study; Obstetrics; Cancer; Environmental health","score_opus":0.1305067291297993,"score_gpt":0.5168336187557433,"score_spread":0.38632688962594397,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2131018426","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00048747493,0.9924018,0.00003612746,0.0045360187,0.00030704253,0.0019935633,0.00009002788,0.000009382172,0.00013856214],"genre_scores_gemma":[0.0012760384,0.9947486,0.00003367238,0.0017359537,0.0017849731,0.00007251624,0.000029975585,0.000053538442,0.00026472704],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.98993677,0.002762536,0.0056647076,0.00037416545,0.00086680194,0.0003949946],"domain_scores_gemma":[0.98864764,0.0024249565,0.0071937763,0.00039767098,0.0007954627,0.0005405127],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.008676968,0.00035600143,0.009470172,0.00030461545,0.00005246888,0.00001463742,0.00022821038,0.0008186299,0.0009055084],"category_scores_gemma":[0.004259025,0.0002283084,0.0015272007,0.00026965325,0.00007392976,0.000055470613,0.00010940345,0.0018992919,0.000005643762],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009588758,0.0001287234,0.02617374,0.6446485,0.0013044763,0.0000030539309,0.000016584361,2.0368506e-7,7.4228663e-9,0.00001021821,0.00033031584,0.3272883],"study_design_scores_gemma":[0.0037813853,0.007157843,0.288478,0.5476861,0.015341189,0.00023376338,0.000005016976,0.00001691494,2.2221698e-7,0.00014469861,0.13682584,0.0003290317],"about_ca_topic_score_codex":0.00022984175,"about_ca_topic_score_gemma":0.0006526612,"teacher_disagreement_score":0.32695928,"about_ca_system_score_codex":0.0004441814,"about_ca_system_score_gemma":0.0012333292,"threshold_uncertainty_score":0.9914682},"labels":[],"label_agreement":null},{"id":"W2133119822","doi":"10.1016/j.jcv.2006.06.014","title":"Rapid detection of Norovirus based on an automated extraction protocol and a real-time multiplexed single-step RT-PCR","year":2006,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Saskatchewan Health","funders":"","keywords":"Norovirus; TaqMan; Real-time polymerase chain reaction; Serial dilution; RNA extraction; Assay sensitivity; Detection limit; Reverse transcription polymerase chain reaction; Polymerase chain reaction; Chromatography; Biology; Virology; Medicine; RNA; Chemistry; Pathology; Virus; Messenger RNA","score_opus":0.071359624997335,"score_gpt":0.444420836207717,"score_spread":0.373061211210382,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2133119822","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99323803,0.0000082066135,0.00074033457,0.0009433014,0.00014091337,0.004588568,0.000005489242,0.00004762601,0.000287522],"genre_scores_gemma":[0.9939163,0.000024717121,0.0046120584,0.00046870264,0.0005815413,0.00033666,0.000007101859,0.000019027886,0.000033929136],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9959232,0.0013958568,0.0018692431,0.00023593956,0.00026271204,0.0003130501],"domain_scores_gemma":[0.9974854,0.00064274017,0.0011180791,0.00019979906,0.0002673092,0.00028668644],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025580656,0.00014601475,0.00096765667,0.0002625661,0.000042424377,0.0000074807726,0.00008597193,0.00035562858,0.00011238231],"category_scores_gemma":[0.00284741,0.00011061955,0.00024175664,0.000096781994,0.00031371432,0.000121010904,0.000019724375,0.00063480635,0.000009104397],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.03931461,0.002306719,0.042566486,0.00007035643,0.00006330644,0.00022476964,0.000003984501,0.00017504065,0.8601067,0.000002577946,0.000771472,0.054393962],"study_design_scores_gemma":[0.015380158,0.06214319,0.81991464,0.0001161932,0.00007815479,0.00065463735,0.000008250559,0.09292407,0.004600192,0.00005843059,0.004028355,0.000093737144],"about_ca_topic_score_codex":0.00014705265,"about_ca_topic_score_gemma":0.00007643109,"teacher_disagreement_score":0.85550654,"about_ca_system_score_codex":0.000046435758,"about_ca_system_score_gemma":0.000100398385,"threshold_uncertainty_score":0.45109344},"labels":[],"label_agreement":null},{"id":"W2133634979","doi":"10.1016/j.jcv.2014.03.017","title":"Biomarkers of inflammation, coagulation and microbial translocation in HIV/HCV co-infected patients in the SMART study","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"HIV-related health complications and treatments","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"National Institute of Allergy and Infectious Diseases; University of Vermont","keywords":"Inflammation; Human immunodeficiency virus (HIV); Coagulation; Chromosomal translocation; Medicine; Immunology; Bacterial translocation; Microbiology; Virology; Biology; Internal medicine; Biochemistry","score_opus":0.03390029858446404,"score_gpt":0.39100434215743146,"score_spread":0.35710404357296743,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2133634979","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99639595,0.00002133966,0.00018866538,0.0027429669,0.00007358695,0.0004587543,0.0000015407376,0.0000019927177,0.00011522805],"genre_scores_gemma":[0.99952734,0.00006151227,0.00014613663,0.00018602559,0.000050636707,0.0000047847425,0.000016581696,0.000004408901,0.0000025685868],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974815,0.0007119715,0.0014871851,0.00009745535,0.00013217703,0.00008968691],"domain_scores_gemma":[0.9983159,0.00075936265,0.0005865345,0.0001233787,0.00016446297,0.000050375664],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001939997,0.00006461031,0.0003892295,0.00020624818,0.00002636616,0.0000030427718,0.000056861605,0.00012620783,0.000009248768],"category_scores_gemma":[0.0006133678,0.00004346912,0.000050415485,0.00017787576,0.00007882794,0.000052975414,0.0000052168566,0.00027017438,0.0000038174517],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00080867467,0.001326525,0.9819811,0.000013055192,0.000048200287,0.000002816169,0.00060328486,0.000013865348,0.00014881523,0.000040719955,0.00007290111,0.014940037],"study_design_scores_gemma":[0.010259701,0.002281401,0.9862415,0.000050578732,0.00007000856,0.000011490378,0.000058568537,0.0005121648,0.000011907198,0.00015380302,0.00032135437,0.000027495304],"about_ca_topic_score_codex":0.000041094383,"about_ca_topic_score_gemma":0.00017876332,"teacher_disagreement_score":0.014912543,"about_ca_system_score_codex":0.000021519705,"about_ca_system_score_gemma":0.00006940514,"threshold_uncertainty_score":0.17726193},"labels":[],"label_agreement":null},{"id":"W2133674866","doi":"10.1016/j.jcv.2007.09.010","title":"Analyses of the prognostic significance of the Epstein–Barr virus transactivator ZEBRA protein and diagnostic value of its two synthetic peptides in nasopharyngeal carcinoma","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Viral-associated cancers and disorders","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"Canadian Institutes of Health Research; Centre International de Recherche sur le Cancer","keywords":"Nasopharyngeal carcinoma; Transactivation; Epstein–Barr virus; Biology; Value (mathematics); Oncology; Internal medicine; Virus; Virology; Medicine; Genetics; Gene; Mathematics; Gene expression; Statistics","score_opus":0.04287590681771365,"score_gpt":0.36744325981639137,"score_spread":0.3245673529986777,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2133674866","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949395,0.0027209297,0.000070136586,0.0013184889,0.00019373937,0.0006372836,0.000012743925,0.00000223491,0.00010492313],"genre_scores_gemma":[0.99923235,0.00024560088,0.00009861392,0.00029605714,0.00008888843,0.0000064243727,2.1461727e-7,0.000015590667,0.00001626098],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9965334,0.0006289324,0.0019727563,0.00018477257,0.0004239581,0.000256168],"domain_scores_gemma":[0.9940213,0.0036635548,0.0017279327,0.0002434939,0.00022144333,0.00012225284],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021095066,0.0001578112,0.0011308294,0.000119032724,0.000033908193,0.0000027251033,0.00027821714,0.0002111401,0.000028325578],"category_scores_gemma":[0.007695749,0.00008800885,0.00046583012,0.0003492893,0.0007090967,0.000061250685,0.000036506175,0.0007079191,3.411956e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0030839636,0.00097204145,0.7714193,0.00026564018,0.00029684792,0.000052571177,0.0003005085,0.00030348188,0.2204455,0.00012403993,0.00002427137,0.0027118293],"study_design_scores_gemma":[0.0048026554,0.00226094,0.8879864,0.00049471913,0.00052508735,0.000029972934,0.0001690672,0.00009136278,0.10300989,0.00053932425,0.000019273135,0.00007128072],"about_ca_topic_score_codex":0.00016299533,"about_ca_topic_score_gemma":0.0001355501,"teacher_disagreement_score":0.11743561,"about_ca_system_score_codex":0.00003653738,"about_ca_system_score_gemma":0.00043782627,"threshold_uncertainty_score":0.9213086},"labels":[],"label_agreement":null},{"id":"W2137658577","doi":"10.1016/s1386-6532(01)00209-8","title":"Early detection of cytomegalovirus (CMV) infection in bone marrow transplant patients by reverse transcription-PCR for CMV spliced late gene UL21.5: a two site evaluation","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Hospital for Sick Children","keywords":"Cytomegalovirus; Antigen; Betaherpesvirinae; Virology; Real-time polymerase chain reaction; Polymerase chain reaction; Herpesviridae; Human cytomegalovirus; Virus; Medicine; Immunology; Reverse transcriptase; Biology; Viral disease; Gene","score_opus":0.07504062168947674,"score_gpt":0.38245667895516683,"score_spread":0.3074160572656901,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2137658577","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960903,0.0004392532,0.0013119009,0.0005917841,0.0005117422,0.0008937176,0.00006842261,0.0000101773285,0.00008270096],"genre_scores_gemma":[0.9967783,0.002037969,0.00025817548,0.00039501366,0.0003321855,0.000030166853,0.000025178264,0.000030365949,0.000112635906],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99577004,0.0005817834,0.0022840004,0.00030674707,0.0006912559,0.00036617558],"domain_scores_gemma":[0.9974596,0.0005049416,0.00089018967,0.00021093564,0.000681089,0.00025325647],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0037785291,0.00019449441,0.001013955,0.0005295119,0.00006246034,0.000012258041,0.00009631547,0.00041923512,0.000320999],"category_scores_gemma":[0.00075188157,0.0001697963,0.0005462829,0.0003460736,0.00019213978,0.00026759313,0.000011447392,0.0009045913,0.0000329717],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.019665362,0.0026959782,0.20992616,0.00015491286,0.00030517014,0.000043780878,0.00068013684,0.00017729464,0.6914331,0.000005446045,0.0005918129,0.074320845],"study_design_scores_gemma":[0.04823632,0.012896513,0.89453053,0.00019168893,0.00082373683,0.00011531866,0.000012763963,0.014808873,0.018659547,0.00026025734,0.00918836,0.00027609966],"about_ca_topic_score_codex":0.0004297946,"about_ca_topic_score_gemma":0.00069889124,"teacher_disagreement_score":0.68460435,"about_ca_system_score_codex":0.00015387531,"about_ca_system_score_gemma":0.00009797897,"threshold_uncertainty_score":0.6924092},"labels":[],"label_agreement":null},{"id":"W2137732012","doi":"10.1016/j.jcv.2005.01.011","title":"Comparative performance evaluation of the HIV-1 LiPA protease and reverse transcriptase resistance assay on clinical isolates","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Centre for Disease Control","funders":"","keywords":"Reverse transcriptase; Genotyping; Virology; Biology; Genotype; Protease; Molecular biology; Human immunodeficiency virus (HIV); Polymerase chain reaction; Genetics; Gene; Enzyme","score_opus":0.13525983677665204,"score_gpt":0.436060702803202,"score_spread":0.30080086602655,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2137732012","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97407144,0.0004283009,0.000027230572,0.023766449,0.000280074,0.00044693492,0.0000061332057,0.000003547161,0.0009698581],"genre_scores_gemma":[0.99416775,0.00043667833,0.0019657903,0.0011175625,0.00036817743,0.0000070448687,0.000002495465,0.0000070746105,0.0019274307],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99626833,0.0012109148,0.0017555022,0.00018322434,0.00043682026,0.00014520054],"domain_scores_gemma":[0.9974125,0.000913791,0.0009314026,0.00021133725,0.000365644,0.0001653468],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0069188913,0.00013145393,0.00082409615,0.000064914915,0.000059201575,0.0000043040814,0.00011022966,0.00017541768,0.00011892462],"category_scores_gemma":[0.0014487479,0.00007424263,0.00028246574,0.00009113714,0.0003524382,0.00009100195,0.000018866209,0.0006907104,0.000029563931],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.01677662,0.0037338368,0.89750683,0.00006126082,0.0009779395,0.000032584212,0.0011238268,0.00012226251,0.00045346929,0.00010668271,0.036109187,0.042995524],"study_design_scores_gemma":[0.015246785,0.002805911,0.8921647,0.00037410727,0.0012255582,0.000069408765,0.000098638164,0.002964075,0.00080377125,0.00013154303,0.083993435,0.000122054196],"about_ca_topic_score_codex":3.4180064e-7,"about_ca_topic_score_gemma":0.0000070380484,"teacher_disagreement_score":0.04788425,"about_ca_system_score_codex":0.00004268538,"about_ca_system_score_gemma":0.00039183686,"threshold_uncertainty_score":0.30275264},"labels":[],"label_agreement":null},{"id":"W2138666186","doi":"10.1016/j.jcv.2014.06.024","title":"Pooled nucleic acid testing increases the diagnostic yield of acute HIV infections in a high-risk population compared to 3rd and 4th generation HIV enzyme immunoassays","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University; University of British Columbia; BC Centre for Disease Control","funders":"Canadian Institutes of Health Research","keywords":"Seroconversion; Medicine; TaqMan; Human immunodeficiency virus (HIV); Virology; Population; Immunology; Internal medicine; Real-time polymerase chain reaction; Biology","score_opus":0.04107267659909472,"score_gpt":0.3290891548311886,"score_spread":0.28801647823209386,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2138666186","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968178,0.00040660903,0.00095663423,0.0012669961,0.00026602892,0.00019785216,0.000045124943,0.000007691125,0.000035231755],"genre_scores_gemma":[0.998965,0.00025989706,0.00032333512,0.00021542309,0.00014599421,0.000011522932,0.00004623587,0.000008408272,0.000024182453],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9969232,0.0015268719,0.0010933883,0.00016543844,0.000059100792,0.0002319791],"domain_scores_gemma":[0.9912965,0.007694195,0.00061825797,0.00018674701,0.00014081162,0.000063440995],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0017198204,0.000120871446,0.00057762093,0.00017622599,0.00014863956,0.000012569766,0.00015159576,0.00021281076,0.00006997615],"category_scores_gemma":[0.010243339,0.00007955824,0.00010820456,0.00015161494,0.00018318577,0.00007952857,0.0000878298,0.00061342894,0.000064190346],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005046269,0.0006030542,0.9482021,0.000004178513,0.00047054014,0.000013557529,0.00007832499,0.00036644275,0.04011661,0.00012804398,0.0011851144,0.008327433],"study_design_scores_gemma":[0.0031916315,0.002325408,0.9920658,0.00003937379,0.0002856307,0.00016777872,0.000020155676,0.00029854666,0.0007715425,0.0003574973,0.00040378596,0.00007285207],"about_ca_topic_score_codex":0.0008251132,"about_ca_topic_score_gemma":0.0006600889,"teacher_disagreement_score":0.043863717,"about_ca_system_score_codex":0.000025229208,"about_ca_system_score_gemma":0.0000650931,"threshold_uncertainty_score":0.9980938},"labels":[],"label_agreement":null},{"id":"W2148711139","doi":"10.1016/j.jcv.2008.09.011","title":"Detection of human metapneumovirus antigens in nasopharyngeal aspirates using an enzyme immunoassay","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Respiratory viral infections research","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier universitaire de Québec","funders":"","keywords":"Immunoassay; Human metapneumovirus; Virology; Antigen; Enzyme; Metapneumovirus; Medicine; Biology; Microbiology; Immunology; Respiratory tract infections; Antibody; Respiratory system; Internal medicine","score_opus":0.2710569837100305,"score_gpt":0.4986730530502502,"score_spread":0.22761606934021972,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2148711139","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99838805,0.0005518848,0.00026303108,0.000088286346,0.00036509603,0.00014929619,0.0000012476174,0.000008752809,0.00018435894],"genre_scores_gemma":[0.9986223,0.00021038558,0.00028280242,0.00030447333,0.0005282779,0.0000014301488,7.702311e-7,0.000021284894,0.000028281598],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9956802,0.0011243115,0.002320254,0.00020408137,0.0003884759,0.00028264517],"domain_scores_gemma":[0.9977233,0.00045599032,0.00089072913,0.00029367203,0.00041974097,0.00021659919],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0033879692,0.0001390066,0.0011085093,0.00066062686,0.00009989961,0.0000063489056,0.0001780537,0.00034954038,0.00013674093],"category_scores_gemma":[0.0014885943,0.000112760375,0.00036427355,0.00038734704,0.00051991537,0.00029471007,0.00005142822,0.0013407861,0.000010723682],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009885263,0.0010132788,0.2419678,0.000015510024,0.00012828673,0.00055560126,0.000044225213,0.00013940848,0.75231564,0.000013478766,0.000009788268,0.002808461],"study_design_scores_gemma":[0.0038955945,0.01392671,0.86966735,0.00003536403,0.00010516219,0.0015914716,0.000031588897,0.00071951194,0.10916716,0.0001526663,0.0006027484,0.00010470316],"about_ca_topic_score_codex":0.00013375502,"about_ca_topic_score_gemma":0.000077711215,"teacher_disagreement_score":0.6431485,"about_ca_system_score_codex":0.00006807201,"about_ca_system_score_gemma":0.0003311173,"threshold_uncertainty_score":0.5825123},"labels":[],"label_agreement":null},{"id":"W2150204428","doi":"10.1016/j.jcv.2004.04.006","title":"Transcriptional analysis of human peripheral blood mononuclear cells after influenza immunization","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada; University of Ottawa; Children's Hospital of Eastern Ontario","funders":"","keywords":"Antigen; Biology; Peripheral blood mononuclear cell; Immune system; Interferon; Immunology; Virology; Influenza A virus; Chemokine; Virus","score_opus":0.1198015321660501,"score_gpt":0.46565068782617586,"score_spread":0.34584915566012575,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150204428","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975869,0.0008367166,0.0003442863,0.00068126764,0.00013080088,0.000106205,0.000011381983,0.00000691204,0.00029553648],"genre_scores_gemma":[0.9954779,0.00044222118,0.001520853,0.0021781067,0.00030394565,0.0000025267466,0.0000030098086,0.000016140202,0.000055306708],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99674547,0.0002674958,0.002047583,0.00016511731,0.00052764674,0.00024669402],"domain_scores_gemma":[0.99797827,0.00023875432,0.0006744811,0.00024789904,0.0006774554,0.00018316387],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014471175,0.00013772828,0.0012271219,0.0005031072,0.00006137041,0.000008493104,0.00017708873,0.00025036832,0.0006944398],"category_scores_gemma":[0.00060905237,0.00010661246,0.00091791037,0.00046419076,0.00051298813,0.00012839193,0.000048225702,0.00077503436,0.000010664729],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.01650376,0.0053465534,0.59134024,0.00014184247,0.024930716,0.0006236367,0.002220662,0.01450266,0.34081426,0.0013753582,0.00019445959,0.0020058106],"study_design_scores_gemma":[0.007854112,0.004465551,0.9794506,0.000043610646,0.0039709513,0.000030496181,0.00007480383,0.00007842173,0.0014543232,0.00047252272,0.0020088928,0.00009571999],"about_ca_topic_score_codex":0.000027094185,"about_ca_topic_score_gemma":0.000023263708,"teacher_disagreement_score":0.3881103,"about_ca_system_score_codex":0.000044977452,"about_ca_system_score_gemma":0.00020008883,"threshold_uncertainty_score":0.76036286},"labels":[],"label_agreement":null},{"id":"W2153029011","doi":"10.1016/j.jcv.2010.08.006","title":"Development of a novel bead-based multiplex PCR assay for combined subtyping and oseltamivir resistance genotyping (H275Y) of seasonal and pandemic H1N1 influenza A viruses","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; St. Joseph’s Healthcare Hamilton","funders":"Canadian Institutes of Health Research","keywords":"Subtyping; Genotyping; Multiplex; Oseltamivir; Virology; Multiplex polymerase chain reaction; Pandemic; Biology; Genotype; Polymerase chain reaction; Coronavirus disease 2019 (COVID-19); Medicine; Genetics; Gene; Internal medicine; Computer science","score_opus":0.24154296043994217,"score_gpt":0.47408505375293036,"score_spread":0.2325420933129882,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153029011","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956826,0.0010369672,0.0022253632,0.00041404596,0.00018580449,0.0003932845,0.000022249851,0.000008477747,0.00003121544],"genre_scores_gemma":[0.9238027,0.00013025811,0.07432363,0.0014915095,0.00020157886,0.00001299217,0.0000013669734,0.000022448443,0.000013510043],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9966274,0.00016972079,0.0021900167,0.00025818855,0.00040545242,0.00034924454],"domain_scores_gemma":[0.99187976,0.005457707,0.0013624782,0.00019256564,0.00085691194,0.00025056998],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.005270888,0.00019556435,0.0013283661,0.00023211329,0.00011164493,0.00000836664,0.00016462298,0.0003241093,0.000012056316],"category_scores_gemma":[0.014221308,0.00015259949,0.00020367061,0.00012436879,0.00089794106,0.000091304726,0.00012210877,0.00093450135,5.7521305e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.020678502,0.0006920991,0.5863487,0.0006146724,0.0006803347,0.000012137245,0.0004026757,0.000013043605,0.38087294,0.000265495,0.00010993792,0.0093094455],"study_design_scores_gemma":[0.022450956,0.0014933762,0.94698596,0.00039666126,0.00021840399,0.000031917833,0.0000787903,0.0012831313,0.0078779,0.00015606575,0.018852735,0.00017412848],"about_ca_topic_score_codex":0.0000061383757,"about_ca_topic_score_gemma":0.0002269923,"teacher_disagreement_score":0.37299502,"about_ca_system_score_codex":0.00002828066,"about_ca_system_score_gemma":0.0008384957,"threshold_uncertainty_score":0.99408233},"labels":[],"label_agreement":null},{"id":"W2156830758","doi":"10.1016/j.jcv.2009.05.025","title":"Screening for polyomavirus associated nephropathy in renal transplantation with blood viral load measurement","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Polyomavirus and related diseases","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier universitaire de Québec; Hôtel-Dieu de Québec","funders":"","keywords":"Viral load; BK virus; Nephropathy; Population; Receiver operating characteristic; Medicine; Polyomavirus Infections; Viremia; Biopsy; Area under the curve; Transplantation; Kidney transplantation; Virology; Immunology; Pathology; Internal medicine; Virus; Endocrinology","score_opus":0.07163509667112589,"score_gpt":0.3734377946110333,"score_spread":0.30180269793990744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2156830758","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931052,0.0012153771,0.0028238716,0.002199708,0.00015231546,0.00023296865,0.000009860112,0.000013250149,0.00024750357],"genre_scores_gemma":[0.9950368,0.00043050648,0.0018253478,0.0022844803,0.00037339618,0.0000024698306,0.0000057108114,0.000012479602,0.000028838245],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974536,0.00021473246,0.0013385649,0.00017247416,0.00052726566,0.0002933705],"domain_scores_gemma":[0.99840605,0.000269538,0.00069059624,0.00009982187,0.0002845905,0.00024939806],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020498838,0.00014338062,0.00073660427,0.00014242802,0.000043728956,0.000008672516,0.000091838534,0.00030261715,0.000019258501],"category_scores_gemma":[0.00081693765,0.00009625732,0.00032864336,0.00012092786,0.00008996092,0.00009442927,0.000004123996,0.0006108579,0.0000016307062],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.27546933,0.01951418,0.41718802,0.00013687238,0.0042026765,0.011129314,0.00063667295,0.0010326857,0.08727284,0.00043966508,0.0016411188,0.18133663],"study_design_scores_gemma":[0.03195703,0.01737605,0.9454853,0.0004326957,0.0018265403,0.0005715062,0.000018142415,0.00025528294,0.0008648302,0.00047391595,0.0005946863,0.00014402991],"about_ca_topic_score_codex":0.000015025435,"about_ca_topic_score_gemma":0.000045610006,"teacher_disagreement_score":0.52829725,"about_ca_system_score_codex":0.00005185575,"about_ca_system_score_gemma":0.00046181097,"threshold_uncertainty_score":0.39252594},"labels":[],"label_agreement":null},{"id":"W2158482299","doi":"10.1016/j.jcv.2013.04.009","title":"Would CLSI M53-A have helped in the diagnosis of HIV in Canada? Results of the performance of Canadian laboratories participating in a recent NLHRS proficiency testing panel containing HIV-1 antigen positive (antibody negative) and HIV-2 samples","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada","funders":"Public Health Agency","keywords":"Medicine; Human immunodeficiency virus (HIV); Referral; Guideline; Sample (material); Immunology; Family medicine; Pathology","score_opus":0.10509580841678441,"score_gpt":0.3511087607768966,"score_spread":0.24601295236011222,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158482299","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99471474,0.00049144856,6.3041165e-7,0.004044129,0.000074947246,0.0003527823,0.00022794545,6.626587e-7,0.00009270585],"genre_scores_gemma":[0.9990619,0.000623376,0.0000818595,0.00016823261,0.00001255616,0.000030148201,0.000011903339,0.0000051304755,0.000004882717],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9961797,0.0014742758,0.0016615926,0.00016253955,0.00010034031,0.00042158095],"domain_scores_gemma":[0.99331665,0.0051618083,0.0009686849,0.00015647676,0.0003377346,0.000058670645],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021841987,0.00012230447,0.0006681775,0.00023577877,0.00006918567,0.000005025429,0.00027741134,0.00019370022,0.000025111449],"category_scores_gemma":[0.0077030915,0.00007225435,0.000048423775,0.00048091865,0.000519088,0.0000857542,0.00006596703,0.00092810584,0.000001251333],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005808645,0.00018589477,0.9911831,0.000016065615,0.000065732114,0.000028119135,0.0029117665,0.000091083915,0.002709685,0.000018102288,0.000083204235,0.0021263652],"study_design_scores_gemma":[0.0026906617,0.0011499028,0.9862517,0.00023412818,0.00001835489,0.000014451544,0.004426581,0.000092051654,0.0049035847,0.000025487996,0.00013487162,0.000058203583],"about_ca_topic_score_codex":0.6823311,"about_ca_topic_score_gemma":0.88256156,"teacher_disagreement_score":0.20023046,"about_ca_system_score_codex":0.00009668087,"about_ca_system_score_gemma":0.001961822,"threshold_uncertainty_score":0.9221876},"labels":[],"label_agreement":null},{"id":"W2158653719","doi":"10.1016/j.jcv.2014.07.017","title":"Calibration of qualitative HBsAg assay results for quantitative HBsAg monitoring","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Provincial Laboratory of Public Health","funders":"Abbott Diagnostics; Abbott Laboratories","keywords":"HBsAg; Medicine; Quantitative analysis (chemistry); Qualitative analysis; Virology; Chronic hepatitis; Immunology; Antigen; Hepatitis B virus; Qualitative research; Chemistry; Chromatography; Virus","score_opus":0.32996427761579095,"score_gpt":0.5560074708209292,"score_spread":0.22604319320513822,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158653719","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9370664,0.0002700417,0.052217375,0.0077339825,0.0014596059,0.00026947225,0.000033578406,0.00001093521,0.0009386052],"genre_scores_gemma":[0.97005206,0.00022138882,0.028066367,0.0004111033,0.0010941506,0.000005951693,0.0000036697459,0.0000163659,0.0001289667],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99515206,0.0015213026,0.002607004,0.00018591362,0.00031735146,0.00021635463],"domain_scores_gemma":[0.98027974,0.016486866,0.001993477,0.00018005416,0.0008937053,0.00016614479],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.009917602,0.00013137228,0.0012550983,0.00013817918,0.000052213712,0.000005088666,0.00011589892,0.00023943066,0.0000088207835],"category_scores_gemma":[0.05489154,0.00009796805,0.0003891427,0.00010503865,0.00032923854,0.0001324279,0.00003758011,0.00047466016,0.000005202839],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.092760004,0.0040819845,0.6817155,0.0008394418,0.005896244,0.00014034218,0.043986037,0.00043988565,0.029866436,0.029897116,0.039853897,0.07052311],"study_design_scores_gemma":[0.034045547,0.068068564,0.8164277,0.00097331364,0.0014279917,0.00009642,0.0039508017,0.007060745,0.013323038,0.025300268,0.028816808,0.0005087827],"about_ca_topic_score_codex":0.000039609255,"about_ca_topic_score_gemma":0.00005304294,"teacher_disagreement_score":0.13471222,"about_ca_system_score_codex":0.000029497474,"about_ca_system_score_gemma":0.00016047432,"threshold_uncertainty_score":0.9530695},"labels":[],"label_agreement":null},{"id":"W2164477249","doi":"10.1016/j.jcv.2008.12.017","title":"PCR inhibition in stool samples in relation to age of infants","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":104,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Juvenile Diabetes Research Foundation","funders":"","keywords":"Biology; Polymerase chain reaction; Virus; Breastfeeding; RNA; Feces; Virology; Internal medicine; Microbiology; Medicine; Biochemistry; Pathology; Gene","score_opus":0.04012551750255547,"score_gpt":0.39333258775781477,"score_spread":0.3532070702552593,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2164477249","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9884492,0.00009159277,0.0097358795,0.0013095093,0.000042271175,0.00011881541,0.0000032208582,0.0000016920897,0.00024782764],"genre_scores_gemma":[0.9932329,0.00024348666,0.005002651,0.0013853807,0.00009754058,0.0000032801522,0.000019747595,0.0000041975827,0.000010815907],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998485,0.00018900991,0.0010044399,0.00014527442,0.00006159181,0.00011466345],"domain_scores_gemma":[0.99932283,0.000056508732,0.0003519437,0.00015571856,0.00005973451,0.000053290252],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009862776,0.00006796745,0.00029435288,0.0001246767,0.000008527657,0.0000020130058,0.000096196374,0.0003165147,0.0000074073832],"category_scores_gemma":[0.00063059974,0.000060926763,0.000106633175,0.00011279217,0.00005980232,0.0000035505948,0.000032406766,0.00023494098,0.0000013119595],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006554032,0.00037317633,0.06117604,0.0000028047036,0.000012802527,0.00003413561,0.000024826282,0.0002591024,0.9223136,0.00096095755,0.00041387702,0.013773333],"study_design_scores_gemma":[0.0009976001,0.0023275877,0.95944464,0.000027073605,0.000008132384,0.000034317018,0.0000072106236,0.000014391873,0.025070325,0.0043440503,0.007647464,0.0000772082],"about_ca_topic_score_codex":0.000006780511,"about_ca_topic_score_gemma":0.00005986586,"teacher_disagreement_score":0.8982686,"about_ca_system_score_codex":0.000007161276,"about_ca_system_score_gemma":0.000047232992,"threshold_uncertainty_score":0.24845213},"labels":[],"label_agreement":null},{"id":"W2167426402","doi":"10.1016/j.jcv.2007.03.013","title":"Hybridization assay performed at ambient temperature for typing high-risk human papillomaviruses","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôtel-Dieu de Montréal; Centre Hospitalier Universitaire Sainte-Justine; Université de Montréal","funders":"","keywords":"Typing; Oligonucleotide; Human papillomavirus; Papillomaviridae; Biology; Nucleic acid thermodynamics; Computational biology; Cervical cancer; Virology; Cancer; Medicine; Genetics; Gene; Internal medicine; Base sequence","score_opus":0.08324949435714508,"score_gpt":0.46748398261411783,"score_spread":0.38423448825697276,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2167426402","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99522346,0.00034166587,0.00091022893,0.001880162,0.00073533755,0.0002492293,0.000007945766,0.000011275222,0.0006407182],"genre_scores_gemma":[0.9930737,0.0006336093,0.0006188672,0.002320345,0.0028725623,0.0000031524764,0.000014614624,0.00002211237,0.00044105484],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9975033,0.00020493624,0.0014164951,0.00020639005,0.0003070167,0.00036190628],"domain_scores_gemma":[0.99650985,0.0017058797,0.00058072736,0.0001844759,0.0006481561,0.0003709188],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0057244133,0.0001210417,0.0007130143,0.00015238325,0.00018073896,0.000013477656,0.0001386142,0.00032751556,0.001095106],"category_scores_gemma":[0.0038212463,0.00008458381,0.00039242377,0.00012641033,0.00017537184,0.00006905276,0.00006140233,0.0010096136,0.000018617755],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.028042803,0.0012404593,0.7726531,0.00021874055,0.00062353397,0.00018709015,0.0001299303,0.000041626492,0.044023264,0.00081145804,0.018809302,0.13321869],"study_design_scores_gemma":[0.006661152,0.005253349,0.9364103,0.000023295817,0.00021195806,0.00012281249,0.000027661235,0.00005341341,0.005181316,0.00065136596,0.045311794,0.000091552734],"about_ca_topic_score_codex":0.000014716898,"about_ca_topic_score_gemma":0.00012372338,"teacher_disagreement_score":0.16375722,"about_ca_system_score_codex":0.00012013943,"about_ca_system_score_gemma":0.00016863031,"threshold_uncertainty_score":0.999818},"labels":[],"label_agreement":null},{"id":"W2167912705","doi":"10.1016/j.jcv.2004.09.013","title":"Intranasal immunization with liposome-encapsulated plasmid DNA encoding influenza virus hemagglutinin elicits mucosal, cellular and humoral immune responses","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":75,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Defence Research and Development Canada; University of Alberta","funders":"","keywords":"Immunology; DNA vaccination; Immune system; Immunization; Naked DNA; Hemagglutinin (influenza); Nasal administration; Humoral immunity; Virology; Medicine; Antibody; Influenza A virus; Virus; Biology; Cell culture; Transfection","score_opus":0.1107160943695748,"score_gpt":0.42586408401162074,"score_spread":0.31514798964204593,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2167912705","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9925263,0.003300821,0.00035818297,0.003034253,0.00025204683,0.0002971114,0.0000070518645,0.000035387733,0.00018885356],"genre_scores_gemma":[0.99254656,0.0026399444,0.0020961345,0.0021518085,0.00047495821,0.0000043699206,0.0000040554823,0.00004401926,0.000038179907],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99553585,0.0006056949,0.0023264857,0.00032278855,0.0006497087,0.00055949565],"domain_scores_gemma":[0.9962178,0.0013049424,0.0010523173,0.0003338797,0.00071483053,0.0003762502],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0028866143,0.00030259002,0.001426063,0.00045492625,0.00021829906,0.000037428847,0.00025131853,0.00039240488,0.00007767323],"category_scores_gemma":[0.0055759167,0.0002164379,0.0002300636,0.00040772973,0.0010197588,0.00028959414,0.00017381644,0.0016804098,0.000021903688],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.07212285,0.0017649649,0.122689106,0.0002174933,0.0022027155,0.0035509798,0.0019234916,0.0012766632,0.7883605,0.00081514905,0.0002420556,0.0048340675],"study_design_scores_gemma":[0.049085684,0.029632406,0.7667233,0.0009966143,0.0009910642,0.002647141,0.0006380304,0.000357214,0.13761318,0.0012825507,0.009298642,0.0007341743],"about_ca_topic_score_codex":0.00005347321,"about_ca_topic_score_gemma":0.000020435136,"teacher_disagreement_score":0.6507473,"about_ca_system_score_codex":0.000092684335,"about_ca_system_score_gemma":0.0006664746,"threshold_uncertainty_score":0.8826081},"labels":[],"label_agreement":null},{"id":"W2169143148","doi":"10.1016/j.jcv.2009.04.010","title":"Genetic microheterogeneity of emerging H275Y influenza virus A (H1N1) in Toronto, Ontario, Canada from the 2007–2008 respiratory season","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto; Mount Sinai Hospital; Toronto Public Health","funders":"","keywords":"Oseltamivir; Virology; Sanger sequencing; Biology; Subclade; Virus; Neuraminidase; Microbiology; Mutation; Gene; Genetics; Medicine; Clade; Phylogenetics; Coronavirus disease 2019 (COVID-19)","score_opus":0.10937508699258104,"score_gpt":0.44059537646086333,"score_spread":0.3312202894682823,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2169143148","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9801893,0.016978076,0.000012092091,0.0016145178,0.0004513206,0.00022207641,0.000017871442,0.000003884929,0.0005108238],"genre_scores_gemma":[0.9750243,0.0010078476,0.00056525617,0.022452809,0.00090544485,0.0000027797864,6.8824517e-7,0.0000154274,0.000025473333],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99535686,0.0007375413,0.0024639429,0.00026106086,0.0006898515,0.0004907165],"domain_scores_gemma":[0.99648154,0.0014123487,0.00097516144,0.0004497776,0.00039388885,0.00028727314],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002085019,0.00021275188,0.0012476698,0.000068152,0.0000717285,0.000007719532,0.00041835452,0.00025804163,0.00065799593],"category_scores_gemma":[0.0028885026,0.00014351672,0.00033257072,0.00011491473,0.0002890435,0.00009470488,0.00010803211,0.001342465,0.0000050993267],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004877178,0.0004140314,0.9546572,0.000010601071,0.00042007043,0.0006799771,0.00039685247,0.000101592734,0.0074038557,0.0000073581764,0.014693405,0.016337851],"study_design_scores_gemma":[0.003526773,0.0017166926,0.90749395,0.000077818986,0.000113500035,0.0000363206,0.000097865595,0.000017736227,0.0005724962,0.00009417246,0.08615342,0.000099237455],"about_ca_topic_score_codex":0.8062392,"about_ca_topic_score_gemma":0.9803495,"teacher_disagreement_score":0.17411032,"about_ca_system_score_codex":0.0007471532,"about_ca_system_score_gemma":0.0029011776,"threshold_uncertainty_score":0.7204594},"labels":[],"label_agreement":null},{"id":"W2171893199","doi":"10.1016/j.jcv.2006.12.025","title":"Epitope mapping of a monoclonal antibody specific for human herpesvirus 6 variant A immediate-early 2 protein","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Monoclonal antibody; Epitope; Virology; Epitope mapping; Antibody; Linear epitope; Biology; Immunology","score_opus":0.12019601482338792,"score_gpt":0.4567227046193318,"score_spread":0.33652668979594386,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2171893199","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98767775,0.0006892157,0.007967302,0.0016336818,0.00040815378,0.0007075046,0.00001533295,0.0000097277625,0.0008913067],"genre_scores_gemma":[0.98721844,0.00030960745,0.008803366,0.00047315547,0.0027859367,0.000006948726,0.0000062716713,0.000038160386,0.00035813855],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99510694,0.0002160113,0.0031733713,0.0003047685,0.00059044745,0.0006084363],"domain_scores_gemma":[0.99587333,0.0013505028,0.001311255,0.00032524104,0.00063636684,0.0005033048],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.008510696,0.00020123456,0.0015248143,0.00047376467,0.00008844984,0.000017472092,0.0003235418,0.00047831176,0.00040735843],"category_scores_gemma":[0.0011085124,0.0001549731,0.00081451546,0.00026900414,0.00041932624,0.00010654995,0.000087884095,0.0013055736,0.000024932937],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.028033713,0.0031819656,0.061514337,0.00023686806,0.0010418149,0.002666088,0.0003939578,0.000004142144,0.8161848,0.003796087,0.0026922133,0.08025402],"study_design_scores_gemma":[0.016100373,0.013776204,0.71383,0.00029416324,0.00016622724,0.0006246476,0.00010466362,0.00006811866,0.007995783,0.00527666,0.24148713,0.0002760398],"about_ca_topic_score_codex":0.0000628871,"about_ca_topic_score_gemma":0.000025950027,"teacher_disagreement_score":0.80818903,"about_ca_system_score_codex":0.000052944146,"about_ca_system_score_gemma":0.00037201046,"threshold_uncertainty_score":0.63196194},"labels":[],"label_agreement":null},{"id":"W2177320301","doi":"10.1016/j.jcv.2015.11.018","title":"Clinicians' attitude towards changes in Australian National Cervical Screening Program","year":2015,"lang":"en","type":"review","venue":"Journal of Clinical Virology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Centre for Disease Control; University of British Columbia","funders":"Cancer Council Victoria; University of Melbourne; Victorian Cancer Agency; GlaxoSmithKline","keywords":"Medicine; Family medicine; Cervical screening; Likert scale; Cervical cancer screening; Human papillomavirus; Cervical cancer; Gynecology; Psychology; Cancer; Internal medicine","score_opus":0.597937484041534,"score_gpt":0.6494701580846056,"score_spread":0.0515326740430716,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2177320301","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00009388712,0.98248154,0.000014809157,0.008823266,0.0011243706,0.0010151904,0.000031734355,0.000024838217,0.00639034],"genre_scores_gemma":[0.00025811885,0.98904085,0.0019646725,0.0013223398,0.00675984,0.000046916877,0.00004785718,0.000056533572,0.0005028707],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9920382,0.001224254,0.004071974,0.00048003456,0.0015495096,0.0006360657],"domain_scores_gemma":[0.99451363,0.0015105321,0.0014912034,0.0002980421,0.0012519672,0.0009346164],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.010218564,0.00039336263,0.005553093,0.0006724795,0.000030419988,0.000032413627,0.0006147262,0.0016916805,0.00209183],"category_scores_gemma":[0.004895931,0.00027014094,0.0015804959,0.0005739519,0.00042593043,0.00007252472,0.00022801908,0.005332702,0.00009551675],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009292571,0.0010016913,0.0014258783,0.0028513104,0.00042535138,0.00058633427,0.0000109670455,8.629109e-7,2.1565675e-8,0.000039603234,0.0053255106,0.9874032],"study_design_scores_gemma":[0.0032453777,0.005364147,0.02666005,0.00186814,0.00074765855,0.0006263871,0.000011120813,0.000015437387,5.4433432e-8,0.00021656089,0.9610464,0.00019865774],"about_ca_topic_score_codex":0.000021553113,"about_ca_topic_score_gemma":0.00021223209,"teacher_disagreement_score":0.98720455,"about_ca_system_score_codex":0.0002541416,"about_ca_system_score_gemma":0.003920413,"threshold_uncertainty_score":0.9999751},"labels":[],"label_agreement":null},{"id":"W2180929798","doi":"10.1016/j.jcv.2015.11.020","title":"Cervical cancer screening of HPV vaccinated populations: Cytology, molecular testing, both or none","year":2015,"lang":"en","type":"review","venue":"Journal of Clinical Virology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":105,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Cancer Institute; Canadian Institutes of Health Research","keywords":"Medicine; Cervical cancer; Vaccination; Cervical screening; Cytology; Gynecology; Cervical cancer screening; HPV infection; Population; Cancer; Oncology; Internal medicine; Immunology; Pathology; Environmental health","score_opus":0.5947570476551605,"score_gpt":0.6148954942158028,"score_spread":0.020138446560642342,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2180929798","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00036549423,0.9948411,0.00054677826,0.000997204,0.00071842805,0.0005737039,0.0000394787,0.000017011724,0.0019007743],"genre_scores_gemma":[0.0012177668,0.99080026,0.005149968,0.0007370955,0.001744116,0.000022287679,0.000029668037,0.00008184064,0.0002169733],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9920578,0.001281883,0.0048471866,0.00043933885,0.00084295316,0.00053081725],"domain_scores_gemma":[0.9913299,0.0025892996,0.0029718326,0.000501278,0.001809485,0.00079817144],"candidate_categories":["metaresearch","metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.003903148,0.00040401687,0.006587022,0.0005117086,0.000044147666,0.000012100674,0.00058065966,0.0014285069,0.0056366697],"category_scores_gemma":[0.010412907,0.0002514592,0.001359218,0.00082242186,0.00035249756,0.00006551176,0.00026944384,0.003471018,0.000021157692],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002108062,0.00046691234,0.0029781645,0.004010486,0.000844606,0.0009085479,0.0000063313387,0.000010717727,0.0000011870061,0.000052880056,0.0019649367,0.9866472],"study_design_scores_gemma":[0.0059817797,0.007512309,0.039067708,0.002576441,0.005543711,0.0023141077,0.000010538509,0.00017782985,0.0000012285086,0.00042696804,0.936059,0.00032836956],"about_ca_topic_score_codex":0.00012865198,"about_ca_topic_score_gemma":0.00008222532,"teacher_disagreement_score":0.9863188,"about_ca_system_score_codex":0.00014010862,"about_ca_system_score_gemma":0.0036802515,"threshold_uncertainty_score":0.99999374},"labels":[],"label_agreement":null},{"id":"W2222463811","doi":"10.1016/j.jcv.2016.01.002","title":"Loop mediated isothermal amplification (LAMP) for the detection and subtyping of human papillomaviruses (HPV) in oropharyngeal squamous cell carcinoma (OPSCC)","year":2016,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Biosensors and Analytical Detection","field":"Engineering","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Libin Cardiovascular Institute of Alberta; Calgary Laboratory Services; University of Alberta; University of Calgary","funders":"Health Research Board","keywords":"Loop-mediated isothermal amplification; Subtyping; Human papillomavirus; Head and neck squamous-cell carcinoma; Oncology; Medicine; Head and neck cancer; Polymerase chain reaction; Otorhinolaryngology; Gold standard (test); Internal medicine; Cancer research; Cancer; DNA; Biology; Gene; Surgery","score_opus":0.0409536903535654,"score_gpt":0.3071982574399017,"score_spread":0.2662445670863363,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2222463811","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9911013,0.00043694882,0.00772545,0.00027359463,0.00031184356,0.00009882798,0.0000042238707,0.000010609417,0.00003719192],"genre_scores_gemma":[0.99930197,0.00026687424,0.000050973107,0.00006237058,0.00028442134,0.0000030419808,3.0444974e-7,0.000015210746,0.000014831327],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99859196,0.000112200694,0.0009499236,0.000105868305,0.00008716376,0.00015291147],"domain_scores_gemma":[0.99773276,0.0017278134,0.00029893295,0.00009985658,0.00007757808,0.00006308743],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008278446,0.000091897935,0.0003548599,0.00009219472,0.000038516187,0.000006481891,0.00009814501,0.00020691878,0.000026531152],"category_scores_gemma":[0.00042078734,0.00005318277,0.00013046483,0.00007854403,0.00014289077,0.000080653124,0.000012560448,0.0002545718,0.0000020823807],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007743436,0.00013572328,0.029780887,0.00007979344,0.00004593936,0.0000075325943,0.000058324636,0.00020617094,0.8665995,0.000105044346,0.00004017371,0.10216656],"study_design_scores_gemma":[0.0040629576,0.0019859353,0.937318,0.000021662898,0.000116351664,0.000024956465,0.00004329136,0.01164488,0.042874373,0.0007845649,0.0009735553,0.00014945031],"about_ca_topic_score_codex":0.00001506446,"about_ca_topic_score_gemma":0.00008416181,"teacher_disagreement_score":0.90753716,"about_ca_system_score_codex":0.000020105825,"about_ca_system_score_gemma":0.000012493894,"threshold_uncertainty_score":0.21687305},"labels":[],"label_agreement":null},{"id":"W2234981304","doi":"10.1016/j.jcv.2015.07.175","title":"Evolving patterns of antiretroviral drug resistance from HIV genotyping in Northern Alberta, Canada: 2007–2013, a retrospective 15 year analysis","year":2015,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Alberta Health Services; Government of Alberta; University of Calgary; University of Alberta; Provincial Laboratory of Public Health","funders":"","keywords":"Virology; Virus; Herpes simplex virus; Varicella zoster virus; Hepatitis C virus; Hepatitis B virus; Vaccination; Medicine; Cytomegalovirus; Poliovirus; Immunology; Viral disease; Herpesviridae","score_opus":0.021456483600313075,"score_gpt":0.30200595909931366,"score_spread":0.28054947549900056,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2234981304","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929931,0.00056912244,0.00016367782,0.0053041326,0.0003327068,0.00009289876,0.000017095846,0.0000029907567,0.0005242568],"genre_scores_gemma":[0.9946504,0.000102061684,0.0013315766,0.00024175404,0.00032123306,0.0000012367639,0.000017243123,0.000015248937,0.003319216],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99705195,0.00028124318,0.0016747499,0.00025325996,0.00047596384,0.00026280293],"domain_scores_gemma":[0.9974291,0.00065103447,0.0010151551,0.0002455842,0.00038311305,0.0002760417],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011041646,0.00016047839,0.0014218902,0.00025248903,0.00002100946,0.0000058078554,0.00016590186,0.00014626679,0.00018728939],"category_scores_gemma":[0.0013355048,0.00012586848,0.0003137738,0.00030179505,0.000072124625,0.000079121826,0.000047939633,0.00054902246,0.000013954195],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010713793,0.0002304751,0.9893256,0.000007315681,0.001383121,0.00041044384,0.00054621085,0.000027758311,0.000010923449,0.000008335224,0.0068186754,0.00015975429],"study_design_scores_gemma":[0.003964928,0.0002074145,0.9918437,0.000086209235,0.00083692704,0.0000067955175,0.00029112838,0.00015104798,0.000023618735,0.00012104879,0.0023647298,0.00010247776],"about_ca_topic_score_codex":0.102522664,"about_ca_topic_score_gemma":0.92413664,"teacher_disagreement_score":0.821614,"about_ca_system_score_codex":0.00037587978,"about_ca_system_score_gemma":0.0011985946,"threshold_uncertainty_score":0.9034537},"labels":[],"label_agreement":null},{"id":"W2282371838","doi":"10.1016/j.jcv.2016.02.011","title":"Cytomegalovirus appendicitis in an immunocompetent host","year":2016,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Columbian Hospital","funders":"","keywords":"Cytomegalovirus; Asymptomatic; Appendicitis; Immunology; Mononucleosis; Medicine; Cytomegalovirus infection; Pathogen; Virology; Immune system; Disease; Immunocompetence; Herpesviridae; Human cytomegalovirus; Viral disease; Virus; Pathology; Surgery","score_opus":0.09282251538142476,"score_gpt":0.4423090809037599,"score_spread":0.34948656552233515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2282371838","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99047947,0.00043024682,0.00016139958,0.0068233423,0.0004984004,0.00018019584,0.000007584144,0.000010916388,0.0014084211],"genre_scores_gemma":[0.9949803,0.0016465709,0.0004676948,0.0015357435,0.0010027693,0.0000035523658,0.0000010399066,0.000026450667,0.00033592933],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99616927,0.00048859476,0.0021171747,0.00026965892,0.00047683666,0.00047844727],"domain_scores_gemma":[0.99720883,0.00106599,0.00055548723,0.0003811887,0.00025843756,0.0005300751],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0032038195,0.00016090456,0.0011784754,0.00046580276,0.000035423076,0.000016637587,0.00033630646,0.0003460399,0.001552413],"category_scores_gemma":[0.0011957578,0.00009308211,0.00042495114,0.00020135588,0.00040222457,0.0002480217,0.00009561628,0.0010040334,0.0003425014],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010514177,0.0019828083,0.72695637,0.000020552177,0.00019063383,0.0029342445,0.000061866915,0.0000011003277,0.0856548,0.0005634938,0.0009529356,0.170167],"study_design_scores_gemma":[0.0106575405,0.00815947,0.89897144,0.0001338897,0.00004858553,0.00089098443,0.000030066762,0.000020881034,0.0007182404,0.00053603866,0.079707935,0.00012494123],"about_ca_topic_score_codex":0.00004222242,"about_ca_topic_score_gemma":0.00012535987,"teacher_disagreement_score":0.17201504,"about_ca_system_score_codex":0.000096952375,"about_ca_system_score_gemma":0.00043162343,"threshold_uncertainty_score":0.9993603},"labels":[],"label_agreement":null},{"id":"W2306431432","doi":"10.1016/j.jcv.2016.03.021","title":"Norovirus detection from sera of young children with acute norovirus gastroenteritis","year":2016,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Vaccine Research Center; AGE-WELL","keywords":"Norovirus; Acute gastroenteritis; Viremia; Rotavirus; Virology; RNA; Biology; Virus; Gene","score_opus":0.03307336127578612,"score_gpt":0.37082003877893205,"score_spread":0.3377466775031459,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2306431432","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9854518,0.000115512004,0.0091574695,0.0045324783,0.0004360489,0.0001505669,0.000079145895,0.000010752763,0.00006622518],"genre_scores_gemma":[0.99329287,0.0016924867,0.0026118073,0.0012774495,0.001009181,0.000003565031,0.0000059487306,0.000023038272,0.00008367976],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9964754,0.0006285106,0.0018147515,0.00027686864,0.0003375919,0.00046690053],"domain_scores_gemma":[0.9975963,0.00029142672,0.0010582412,0.00028981245,0.0003059425,0.0004582824],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00109375,0.00017707823,0.0013611646,0.00016028114,0.000033133045,0.0000056286926,0.00023619519,0.00024428626,0.0002940081],"category_scores_gemma":[0.0013732954,0.00010016136,0.0004315413,0.00007828255,0.00056218746,0.0001657272,0.00008243559,0.0006779097,0.000030590505],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.018806357,0.00030165608,0.84604883,0.0000054167576,0.0010673722,0.00047976288,0.000008441492,0.0000014709478,0.07751701,0.0000026310338,0.00057777204,0.05518326],"study_design_scores_gemma":[0.00960272,0.02208763,0.9610152,0.00013550026,0.00027827208,0.0044482625,0.0000072878543,0.00001264094,0.001639855,0.00014279615,0.0005635781,0.00006621116],"about_ca_topic_score_codex":0.00018855292,"about_ca_topic_score_gemma":0.00037763975,"teacher_disagreement_score":0.1149664,"about_ca_system_score_codex":0.00004478489,"about_ca_system_score_gemma":0.000129928,"threshold_uncertainty_score":0.40844616},"labels":[],"label_agreement":null},{"id":"W2331711813","doi":"10.1016/j.jcv.2016.04.003","title":"Sexually-transmitted seronegative HCV infection in an HIV-positive post-liver transplant recipient. Case report and review of the literature","year":2016,"lang":"en","type":"review","venue":"Journal of Clinical Virology","topic":"Hepatitis C virus research","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"AIDS Vancouver; University of British Columbia","funders":"","keywords":"Medicine; Viremia; Ledipasvir; Hepatitis C; Sexual transmission; Immunology; Sofosbuvir; Human immunodeficiency virus (HIV); Transmission (telecommunications); Virology; Hepatitis C virus; Ribavirin; Virus","score_opus":0.08965115190098999,"score_gpt":0.4696641491780565,"score_spread":0.3800129972770665,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2331711813","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.03752346,0.95909137,0.000024161585,0.0013040251,0.0004237778,0.0012423316,0.00022821408,0.00000464415,0.00015801044],"genre_scores_gemma":[0.002244824,0.9961384,0.00009441493,0.0008659812,0.00043513835,0.000015160332,0.000045036028,0.000037304155,0.0001237358],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9899475,0.0047093253,0.004099123,0.00042691716,0.00051917724,0.0002979687],"domain_scores_gemma":[0.9930388,0.0025459775,0.0025501738,0.00049666467,0.0010330736,0.0003353107],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0054446273,0.0003440603,0.003880408,0.00035146574,0.00004321312,0.000011006598,0.00020805067,0.00097135204,0.00013442831],"category_scores_gemma":[0.003941386,0.0001721695,0.00090622884,0.0004464878,0.00047458502,0.00019312343,0.00006005872,0.0032085865,0.0000066182165],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007509173,0.0004556241,0.011138038,0.032934822,0.0006137718,0.12581052,0.00028540107,2.6857933e-8,0.0000044669046,0.000012276186,0.00023735229,0.82775676],"study_design_scores_gemma":[0.0025726634,0.0051775984,0.02310744,0.36108547,0.002553625,0.23998679,0.0000051535203,0.0000026839798,0.0000030529209,0.000031516476,0.36520976,0.00026425603],"about_ca_topic_score_codex":0.000045962843,"about_ca_topic_score_gemma":0.00022149757,"teacher_disagreement_score":0.82749254,"about_ca_system_score_codex":0.00011651578,"about_ca_system_score_gemma":0.0012091758,"threshold_uncertainty_score":0.999091},"labels":[],"label_agreement":null},{"id":"W2395119089","doi":"10.1016/j.jcv.2016.05.008","title":"Evaluation of the abbot Architect™ epstein-barr virus viral capsid antigen IgM, viral capsid antigen IgG and nuclear antigen IgG assays in a pediatric and adult population","year":2016,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Viral-associated cancers and disorders","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Capsid; Virology; Antigen; Virus; Epstein–Barr virus; Biology; Immunology","score_opus":0.034047350696211606,"score_gpt":0.3523983065626552,"score_spread":0.3183509558664436,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2395119089","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99366266,0.0018447164,0.000025792773,0.0032067313,0.0005033613,0.00042728323,0.000020985635,0.000010371146,0.00029812506],"genre_scores_gemma":[0.9920716,0.0063085295,0.00014890812,0.0008772961,0.000535643,0.0000032290843,0.0000034873003,0.000033132786,0.00001814582],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99517816,0.0012998149,0.0018563225,0.00036823077,0.00089948275,0.00039799025],"domain_scores_gemma":[0.9971407,0.00042333984,0.0014622515,0.0002944688,0.00045795133,0.00022127344],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004906583,0.00024068989,0.001044219,0.00029827014,0.00010428062,0.00001719158,0.00020454872,0.0004864316,0.00008367672],"category_scores_gemma":[0.0035399846,0.00014926886,0.0003197049,0.00022993839,0.00032487072,0.0001958109,0.00009880636,0.000688558,0.000005536222],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001600144,0.00029408516,0.95609725,0.00003040831,0.00017170118,0.000023564993,0.00033830892,0.000039903312,0.008916286,0.000097984055,0.00035881257,0.032031577],"study_design_scores_gemma":[0.011539314,0.0024161283,0.9807606,0.00009888942,0.00048397598,0.00007754254,0.00009456499,0.0006170357,0.00015440086,0.0033845815,0.00020814763,0.00016485457],"about_ca_topic_score_codex":0.00042107535,"about_ca_topic_score_gemma":0.00058465183,"teacher_disagreement_score":0.03186672,"about_ca_system_score_codex":0.000109981804,"about_ca_system_score_gemma":0.00037033908,"threshold_uncertainty_score":0.60870075},"labels":[],"label_agreement":null},{"id":"W2509643246","doi":"10.1016/j.jcv.2016.09.001","title":"Simultaneous detection of Zika, Chikungunya and Dengue viruses by a multiplex real-time RT-PCR assay","year":2016,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":101,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Calgary; Provincial Laboratory of Public Health","funders":"Pan American Health Organization","keywords":"Chikungunya; Zika virus; Dengue fever; Virology; Multiplex; Dengue virus; Biology; Amniotic fluid; Virus; Bioinformatics; Genetics; Pregnancy; Fetus","score_opus":0.021664687546720917,"score_gpt":0.35405195709250575,"score_spread":0.33238726954578485,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2509643246","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99579,0.0009256898,0.0011327373,0.0015244572,0.00029843603,0.00016115796,0.000024702993,0.0000134990105,0.0001293101],"genre_scores_gemma":[0.9963921,0.0013682958,0.0001831206,0.0009885549,0.0007421098,0.0000024965598,9.239921e-7,0.000020689271,0.00030171406],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9973722,0.000411492,0.0014937762,0.00022622327,0.00025869327,0.00023762038],"domain_scores_gemma":[0.9939089,0.0042276257,0.0009889959,0.0002302693,0.00027059353,0.00037360974],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011982019,0.0001545545,0.0010361448,0.00009123433,0.000033707074,0.000006095228,0.000120065044,0.0003127103,0.00025233027],"category_scores_gemma":[0.007182738,0.00009208938,0.00037423242,0.000059313847,0.00026558343,0.00007166672,0.0000403634,0.00031719395,0.000023442324],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0092417495,0.0008204461,0.06549481,0.00003604681,0.000498744,0.00030406084,0.000025778976,0.0000075410126,0.6976173,0.000016456092,0.0012059866,0.22473109],"study_design_scores_gemma":[0.058346685,0.02666776,0.8027375,0.00055964274,0.0035520785,0.0020504748,0.000098489734,0.007709614,0.019702991,0.000988488,0.07689589,0.0006904223],"about_ca_topic_score_codex":0.000031447616,"about_ca_topic_score_gemma":0.000018550696,"teacher_disagreement_score":0.73724264,"about_ca_system_score_codex":0.000020404212,"about_ca_system_score_gemma":0.00011237168,"threshold_uncertainty_score":0.85989267},"labels":[],"label_agreement":null},{"id":"W2514209992","doi":"10.1016/j.jcv.2016.08.294","title":"Economic impact of switching rubella IgG methodologies to the prenatal public health program in Alberta","year":2016,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Provincial Laboratory of Public Health; University of Alberta; Ministry of Health","funders":"","keywords":"Rubella; Medicine; Vaccination; Rubella vaccine; Congenital rubella syndrome; Prenatal screening; Pregnancy; Immunization; Rubella virus; Public health; Pediatrics; Obstetrics; Environmental health; Immunology; Prenatal diagnosis; Antibody; Fetus; Measles; Nursing; Biology","score_opus":0.22181134668376423,"score_gpt":0.5409764808533436,"score_spread":0.31916513416957937,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2514209992","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.913783,0.00034646865,0.00063330727,0.08444871,0.00037291096,0.0002894827,0.0000066854327,0.000007307579,0.0001120859],"genre_scores_gemma":[0.995475,0.0004132814,0.0016583216,0.0018566534,0.00052776065,0.0000070648885,8.8933655e-7,0.000011281737,0.000049764905],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9961723,0.0014018348,0.001735008,0.0001968877,0.00010951735,0.00038445456],"domain_scores_gemma":[0.9938254,0.004512808,0.00095059135,0.00029681687,0.00006320254,0.00035120625],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0047825566,0.00013568554,0.0010793057,0.00018968651,0.000033286877,0.0000060874277,0.00031864262,0.0002252359,0.00014413492],"category_scores_gemma":[0.008328936,0.00005958768,0.00056123565,0.0000853694,0.00024486348,0.00012019917,0.00010801871,0.00052945886,0.000033639953],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004271817,0.00045791725,0.50762033,0.000027686809,0.00041298819,0.000039023205,0.00014046405,0.00008165738,0.00041570145,0.00042502413,0.0016984295,0.48440897],"study_design_scores_gemma":[0.0030461021,0.01945932,0.97049934,0.00009198379,0.000058476828,0.00014519868,0.000022017904,0.000053509437,0.000037084956,0.0021223254,0.0043969504,0.000067691486],"about_ca_topic_score_codex":0.00020255159,"about_ca_topic_score_gemma":0.00065638724,"teacher_disagreement_score":0.4843413,"about_ca_system_score_codex":0.00012395963,"about_ca_system_score_gemma":0.0012212228,"threshold_uncertainty_score":0.9971116},"labels":[],"label_agreement":null},{"id":"W2518709734","doi":"10.1016/j.jcv.2015.07.231","title":"Validation of MSwab medium long term frozen stability of clinical specimens for the detection of viruses by nucleic acids amplification assays and by culture","year":2015,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Respiratory viral infections research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; St. Joseph’s Healthcare Hamilton","funders":"","keywords":"Nucleic acid; Medium term; Nucleic Acid Amplification Tests; Chemistry; Virology; Biology; Biochemistry","score_opus":0.2648731800959246,"score_gpt":0.5066716675885267,"score_spread":0.24179848749260208,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2518709734","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9865997,0.00060211215,0.010975161,0.0008210311,0.00044641705,0.00045381446,0.000038361864,0.0000050119393,0.000058395613],"genre_scores_gemma":[0.99848896,0.0005204204,0.00033721275,0.00016354532,0.00044100548,0.0000067620585,0.000006947249,0.000013367872,0.000021789772],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99520004,0.0010199591,0.0029346733,0.00021287237,0.00048046632,0.00015196594],"domain_scores_gemma":[0.99294025,0.0031080428,0.0020941058,0.0003471408,0.0012966197,0.00021386084],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.009469216,0.00011516346,0.00096497696,0.00009537835,0.000041739655,0.000008009817,0.00018402029,0.0004449522,0.00005051029],"category_scores_gemma":[0.013748157,0.000071931914,0.0003195378,0.00016175096,0.00087577256,0.0001609226,0.000055752476,0.0007347034,0.0000018945661],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0049970015,0.0010250731,0.61679953,0.00008268302,0.00029308308,0.0000010197263,0.00009392651,0.000004607193,0.36266533,0.000015110659,0.0025813947,0.011441225],"study_design_scores_gemma":[0.0059818467,0.012500952,0.7536539,0.000042401738,0.00043880966,0.00003065871,0.00016260004,0.000163993,0.2186126,0.0003682543,0.007964339,0.00007969017],"about_ca_topic_score_codex":0.000016867763,"about_ca_topic_score_gemma":0.000012708673,"teacher_disagreement_score":0.14405274,"about_ca_system_score_codex":0.000039116425,"about_ca_system_score_gemma":0.00024952137,"threshold_uncertainty_score":0.99455947},"labels":[],"label_agreement":null},{"id":"W2555760069","doi":"10.1016/j.jcv.2016.11.008","title":"Influenza and rhinovirus viral load and disease severity in upper respiratory tract infections","year":2016,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Respiratory viral infections research","field":"Medicine","cited_by":112,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; Mount Sinai Hospital; University of Toronto; Public Health Ontario","funders":"","keywords":"Rhinovirus; Viral load; Medicine; Ambulatory; Viral shedding; Respiratory tract; Respiratory tract infections; Streptococcus pneumoniae; Internal medicine; Intensive care unit; Virus; Immunology; Influenza A virus; Respiratory system; Virology; Biology; Microbiology; Antibiotics","score_opus":0.1289931495740421,"score_gpt":0.48127994054970824,"score_spread":0.3522867909756662,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2555760069","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955113,0.0009995081,0.00006426949,0.0027189718,0.00022907555,0.00016609588,0.000005121739,0.000010900248,0.00029475195],"genre_scores_gemma":[0.9926824,0.00043972515,0.000060779726,0.0063001155,0.00043962986,0.0000054137395,7.673721e-8,0.000014297784,0.000057574056],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9972137,0.0006509515,0.0013292752,0.00024369039,0.00029891386,0.00026347328],"domain_scores_gemma":[0.9971932,0.0012793775,0.00033014832,0.00022893067,0.00023310873,0.0007351903],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0028410736,0.00013566176,0.0006269671,0.00034613395,0.00006210977,0.000017998604,0.00007739118,0.00026770728,0.0001557916],"category_scores_gemma":[0.010689002,0.00008540635,0.00016601394,0.00014701652,0.00068591733,0.00035974954,0.00008652779,0.00095792883,0.000028475763],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020153767,0.0008416235,0.9664433,0.000017398295,0.000049851602,0.00025315426,0.000013600461,0.0000011761772,0.0028538087,0.00016493547,0.00039195578,0.026953848],"study_design_scores_gemma":[0.005294895,0.0032445788,0.9361472,0.00006377467,0.000057943595,0.00017834934,0.00000476127,0.0000093023455,0.000033560995,0.0016012695,0.053281218,0.000083119616],"about_ca_topic_score_codex":0.000016393597,"about_ca_topic_score_gemma":0.00003512202,"teacher_disagreement_score":0.05288926,"about_ca_system_score_codex":0.00009314661,"about_ca_system_score_gemma":0.00075933203,"threshold_uncertainty_score":0.99764436},"labels":[],"label_agreement":null},{"id":"W2560750403","doi":"10.1016/j.jcv.2016.12.004","title":"Aptima HPV Assay versus Hybrid Capture® 2 HPV test for primary cervical cancer screening in the HPV FOCAL trial","year":2016,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; BC Centre for Disease Control; University of British Columbia; St. Joseph’s Healthcare Hamilton; McGill University; BC Cancer Agency","funders":"Canadian Institutes of Health Research","keywords":"Colposcopy; Medicine; Cytology; Cervical cancer; Cervical intraepithelial neoplasia; Cervical cancer screening; Gynecology; Triage; Cervix; Internal medicine; HPV infection; Papillomaviridae; Oncology; Obstetrics; Cancer; Pathology","score_opus":0.16108606262917496,"score_gpt":0.4719764317944806,"score_spread":0.31089036916530566,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2560750403","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.61825454,0.005505245,0.024383623,0.30509335,0.009380575,0.003870426,0.0002264328,0.000061456834,0.033224367],"genre_scores_gemma":[0.98363703,0.00069099636,0.0008089157,0.0076788417,0.006810393,0.00006458273,0.000006086252,0.000036423226,0.0002667345],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99536365,0.0007590885,0.0019712674,0.00037770436,0.0008623158,0.00066600007],"domain_scores_gemma":[0.9780452,0.020201592,0.000550458,0.00036938436,0.00045159223,0.00038174074],"candidate_categories":["metaresearch","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0069193584,0.00022457459,0.0013151722,0.00017140336,0.00008107236,0.000025180661,0.0005618823,0.00041230227,0.004136483],"category_scores_gemma":[0.0107582165,0.00011206539,0.00080358586,0.00018370691,0.0005081472,0.00012598495,0.00012441388,0.0017026255,0.000021996706],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.29623884,0.0009942553,0.015830066,0.000051686737,0.0002333255,0.00031919003,0.000037859474,0.000005684827,0.000096530086,0.00011652562,0.009799801,0.6762762],"study_design_scores_gemma":[0.19864058,0.015626283,0.6720538,0.000037868398,0.0003887684,0.00022083448,0.00005379109,0.00026959673,0.00005256435,0.00085457356,0.11159832,0.00020301844],"about_ca_topic_score_codex":0.000062504776,"about_ca_topic_score_gemma":0.000175093,"teacher_disagreement_score":0.6760732,"about_ca_system_score_codex":0.00013446559,"about_ca_system_score_gemma":0.0008603209,"threshold_uncertainty_score":0.99757457},"labels":[],"label_agreement":null},{"id":"W2613257432","doi":"10.1016/j.jcv.2017.05.005","title":"Comparative evaluation of three FDA-approved HIV Ag/Ab combination tests using a genetically diverse HIV panel and diagnostic specimens","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Seroconversion; Virology; Human immunodeficiency virus (HIV); Medicine; Roche Diagnostics; Internal medicine","score_opus":0.3189669321091781,"score_gpt":0.4617797609744744,"score_spread":0.14281282886529628,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2613257432","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99647063,0.0009784155,0.0004240086,0.0010265164,0.00038970777,0.0003072555,0.000036442754,0.000003089369,0.0003639231],"genre_scores_gemma":[0.9989764,0.00027652018,0.0005508277,0.000042496235,0.000081256556,0.0000040061263,0.000017709546,0.000006282711,0.00004448615],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99743444,0.0010162797,0.0009447715,0.0002047228,0.00015483513,0.00024494468],"domain_scores_gemma":[0.9949875,0.0028236422,0.00119484,0.00028806186,0.00062300067,0.00008296396],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024132722,0.00013430297,0.00074564095,0.000096880096,0.0002186559,0.000018654648,0.00026501808,0.00026765506,0.00024985557],"category_scores_gemma":[0.005705663,0.00010106447,0.00015518907,0.000028058757,0.0010834594,0.00011891365,0.00015687045,0.00047372872,0.00009832798],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0030974278,0.0032172154,0.8790136,0.00002412542,0.0021200783,0.0001275395,0.0004200416,0.00017822733,0.076236784,0.0006902342,0.002031171,0.032843553],"study_design_scores_gemma":[0.010564404,0.00229184,0.9818163,0.000037551763,0.0005454384,0.00011459055,0.00006443092,0.0009887891,0.0010727993,0.002029857,0.00038836367,0.000085632775],"about_ca_topic_score_codex":0.000019932273,"about_ca_topic_score_gemma":0.00008041081,"teacher_disagreement_score":0.1028027,"about_ca_system_score_codex":0.000037565347,"about_ca_system_score_gemma":0.0002491725,"threshold_uncertainty_score":0.6830624},"labels":[],"label_agreement":null},{"id":"W2613507072","doi":"10.1016/j.jcv.2017.05.007","title":"Hepatitis C virus core antigen: A simplified treatment monitoring tool, including for post-treatment relapse","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Hepatitis C virus research","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Health and Medical Research Council; Merck Sharp and Dohme; Abbott Diagnostics; Australian Government; University of New South Wales; Medical Research Council; Abbott Laboratories","keywords":"Medicine; Virology; Hepatitis C virus; Core (optical fiber); Hepatitis a virus; Virus; Immunology; Internal medicine; Computer science","score_opus":0.39812304789238984,"score_gpt":0.5490570398654765,"score_spread":0.15093399197308666,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2613507072","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99039435,0.00043338042,0.00020573463,0.0058980705,0.0016626063,0.0006590727,0.00005338373,0.00001718413,0.0006762268],"genre_scores_gemma":[0.9737996,0.018520791,0.0036154452,0.0004420314,0.0029195764,0.00003723865,0.0000070472793,0.00004654833,0.0006117221],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9967,0.00020195286,0.0017976993,0.00035198804,0.00040742947,0.0005409489],"domain_scores_gemma":[0.9948669,0.0018196795,0.0012856204,0.0007668612,0.00076839444,0.00049254706],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014933943,0.00026249088,0.0014792994,0.00018694048,0.00044469416,0.000067191635,0.00035078035,0.00041623728,0.00010736294],"category_scores_gemma":[0.0082808025,0.0001859193,0.00081915146,0.00004558478,0.00030754413,0.0002202135,0.00012852515,0.00050218165,0.000055717373],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004333493,0.0010049873,0.8251464,0.000019049916,0.000799035,0.0013468146,0.00014075461,0.000004630835,0.008489863,0.00014468544,0.00029946998,0.15827082],"study_design_scores_gemma":[0.0132975215,0.03287937,0.8570243,0.0001348739,0.00039083412,0.00026868234,0.00003907666,0.00026716053,0.0040234257,0.0007215322,0.090759836,0.00019339501],"about_ca_topic_score_codex":0.0012908111,"about_ca_topic_score_gemma":0.00073697703,"teacher_disagreement_score":0.15807743,"about_ca_system_score_codex":0.0004666714,"about_ca_system_score_gemma":0.00076429493,"threshold_uncertainty_score":0.9913492},"labels":[],"label_agreement":null},{"id":"W2727153390","doi":"10.1016/j.jcv.2017.06.009","title":"Compartmental HBV evolution and replication in liver and extrahepatic sites after nucleos/tide analogue therapy in chronic hepatitis B carriers","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"cccDNA; Peripheral blood mononuclear cell; Hepatitis B virus; Liver biopsy; Immunology; Medicine; Virology; Hepatitis B; Biology; Virus; Internal medicine; HBsAg; Biopsy; In vitro","score_opus":0.07338359914938192,"score_gpt":0.40051383343926117,"score_spread":0.32713023428987925,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2727153390","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99263227,0.0047878856,0.000025147934,0.0021166196,0.00012442583,0.00022348888,0.000006853474,0.0000037965797,0.000079504454],"genre_scores_gemma":[0.9792372,0.019639064,0.00027622364,0.0005852962,0.00022565832,0.000010595979,0.0000025408358,0.000010224456,0.000013226975],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981766,0.00024874078,0.0009959977,0.0002442616,0.00014098304,0.00019344791],"domain_scores_gemma":[0.99855065,0.0003657284,0.000578677,0.0002993785,0.000074555224,0.00013099721],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011950798,0.00011894169,0.00070846966,0.00014802332,0.00007366829,0.00001709487,0.0000859115,0.00016482042,0.00003881874],"category_scores_gemma":[0.0012446346,0.000097296506,0.000084352316,0.000041120526,0.00054631225,0.00019145178,0.000064067644,0.00044875348,0.000004202204],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000822192,0.0001274474,0.9831263,0.000021883821,0.00006522733,0.00026265142,0.00018862367,0.000001458252,0.0007013859,0.00003118846,0.0001602198,0.014491415],"study_design_scores_gemma":[0.0037272975,0.0021989048,0.99135286,0.00011265115,0.000047405076,0.00012581178,0.000012850937,0.0012313752,0.000027985048,0.0004739561,0.0006128969,0.00007599875],"about_ca_topic_score_codex":0.0014480476,"about_ca_topic_score_gemma":0.02660826,"teacher_disagreement_score":0.025160212,"about_ca_system_score_codex":0.00016448252,"about_ca_system_score_gemma":0.000114407194,"threshold_uncertainty_score":0.9911536},"labels":[],"label_agreement":null},{"id":"W2741676432","doi":"10.1016/j.jcv.2017.07.015","title":"Diagnostic yield and clinical impact of routine cell culture for respiratory viruses among children with a negative multiplex RT-PCR result","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Respiratory viral infections research","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Children's Hospital; McGill University Health Centre","funders":"","keywords":"Viral culture; Respiratory system; Multiplex polymerase chain reaction; Medicine; Internal medicine; Polymerase chain reaction; Microbiological culture; Respiratory tract infections; Cohort; Biology; Virus; Gastroenterology; Virology","score_opus":0.18147544390138567,"score_gpt":0.5148844565850684,"score_spread":0.3334090126836827,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2741676432","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977871,0.00028283484,0.00020631796,0.00030802953,0.00020237558,0.00080812187,0.00004311467,0.00000943113,0.00035265597],"genre_scores_gemma":[0.9966323,0.00029438327,0.00079842104,0.0007963207,0.0013527046,0.000011599376,0.000001417354,0.00003348871,0.000079410354],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99587464,0.00056701456,0.0024420333,0.00037892206,0.00036935028,0.00036800752],"domain_scores_gemma":[0.9865015,0.008508235,0.0027970225,0.00067576073,0.000959323,0.0005581176],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.004099921,0.00024672793,0.0015529603,0.00018702593,0.00021992232,0.000047082318,0.00037545705,0.00061650784,0.00005317898],"category_scores_gemma":[0.073005214,0.00014654912,0.00075726997,0.000092328984,0.0020441287,0.00030454987,0.00015116736,0.0017863226,0.00000545909],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0096959425,0.00097449915,0.9817565,0.00002972921,0.0008422203,0.00008588231,0.00004846866,0.000025219473,0.0010775225,0.000007809146,0.002541681,0.0029145028],"study_design_scores_gemma":[0.013417159,0.03994562,0.94429064,0.00016839773,0.00044007972,0.00008890304,0.000023476236,0.00006615971,0.00076833914,0.0000924627,0.0005696854,0.00012906654],"about_ca_topic_score_codex":0.0001712868,"about_ca_topic_score_gemma":0.00020188786,"teacher_disagreement_score":0.068905294,"about_ca_system_score_codex":0.000040690455,"about_ca_system_score_gemma":0.00056896626,"threshold_uncertainty_score":0.93480325},"labels":[],"label_agreement":null},{"id":"W2761192232","doi":"10.1016/j.jcv.2017.10.003","title":"High genetic variability of norovirus leads to diagnostic test challenges","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Children's Hospital; Provincial Laboratory of Public Health; Alberta Health Services; University of Calgary; University of Alberta","funders":"","keywords":"Norovirus; Test (biology); Virology; Genetics; Medicine; Biology; Virus","score_opus":0.1314961103035381,"score_gpt":0.4634027317116976,"score_spread":0.3319066214081595,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2761192232","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96188587,0.000395706,0.000440113,0.03606227,0.0007169332,0.00015741138,0.0000108584545,0.0000042101055,0.00032661055],"genre_scores_gemma":[0.98704094,0.0053183557,0.004757998,0.0015487031,0.0012679583,0.000004097468,6.8331934e-7,0.000012338147,0.00004891235],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9964793,0.00070822757,0.0019154956,0.0002465273,0.000253091,0.00039736056],"domain_scores_gemma":[0.9915224,0.0056821173,0.0010914557,0.0006977906,0.0003803357,0.0006259557],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0043453914,0.0001287571,0.0014831012,0.000096456046,0.000060795966,0.0000072974544,0.0004983035,0.00026966928,0.00018593289],"category_scores_gemma":[0.20474568,0.00009436412,0.00036261056,0.000025146568,0.0006809602,0.0000627546,0.000208667,0.00079156645,0.000051896754],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019068659,0.00080759736,0.944276,0.00006404788,0.00010190089,0.00046772484,0.00001281768,0.000018268607,0.0023657607,0.00008630841,0.001530995,0.048361715],"study_design_scores_gemma":[0.0024998765,0.01692524,0.97553205,0.0000838223,0.00008753865,0.0003574815,0.0000048942693,0.000019761736,0.00006715206,0.0014143173,0.0029563813,0.00005150822],"about_ca_topic_score_codex":0.000043013046,"about_ca_topic_score_gemma":0.00006816175,"teacher_disagreement_score":0.2004003,"about_ca_system_score_codex":0.000022558326,"about_ca_system_score_gemma":0.00016604751,"threshold_uncertainty_score":0.8019531},"labels":[],"label_agreement":null},{"id":"W2761873103","doi":"10.1016/j.jcv.2017.10.005","title":"HIV misdiagnosis: A root cause analysis leading to improvements in HIV diagnosis and patient care","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Science Centre for Human and Animal Health; Provincial Laboratory of Public Health; Ministry of Health; Saskatchewan Disease Control Laboratory; University of Alberta; University of Calgary","funders":"","keywords":"Human immunodeficiency virus (HIV); Root cause analysis; Medicine; Root (linguistics); HIV diagnosis; Root cause; Intensive care medicine; Virology; Antiretroviral therapy; Viral load; Forensic engineering","score_opus":0.0545218255833717,"score_gpt":0.4064662473117624,"score_spread":0.3519444217283907,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2761873103","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931084,0.002668672,0.000030040701,0.0034079906,0.0003634646,0.00020807491,0.000056436525,0.0000040733594,0.00015286726],"genre_scores_gemma":[0.99828845,0.0008906464,0.00013892652,0.00044353813,0.000052579842,0.000042588825,0.000013295326,0.000008839636,0.00012112913],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99758905,0.00047961096,0.0011186444,0.0003088502,0.000077041586,0.00042680826],"domain_scores_gemma":[0.99775463,0.00087285956,0.00065881613,0.000397469,0.00014485185,0.00017137357],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006651687,0.00016141117,0.00094346114,0.00038070214,0.00020224796,0.000037267317,0.00036607607,0.00029561,0.00019224916],"category_scores_gemma":[0.0020348802,0.00012185826,0.00031819436,0.00009938153,0.0002490075,0.00011773071,0.0002468086,0.00061340694,0.00025559714],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007966343,0.00052751147,0.93369484,0.00000721762,0.0018176441,0.00033910386,0.0005210928,0.000016704147,0.0005102819,0.000009034611,0.00348197,0.05827795],"study_design_scores_gemma":[0.004052576,0.0036211892,0.9711958,0.000041811843,0.00055046653,0.000024114323,0.00023771012,0.0000022759864,0.00092416606,0.000029655776,0.019204605,0.00011559142],"about_ca_topic_score_codex":0.00010970827,"about_ca_topic_score_gemma":0.0010522527,"teacher_disagreement_score":0.058162358,"about_ca_system_score_codex":0.000059122955,"about_ca_system_score_gemma":0.00008444023,"threshold_uncertainty_score":0.49692357},"labels":[],"label_agreement":null},{"id":"W2795639631","doi":"10.1016/j.jcv.2018.03.013","title":"HIV-1 non-R5 tropism correlates with a larger size of the cellular viral reservoir and a detectable residual viremia in patients under suppressive ART","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Bristol-Myers Squibb Canada; ViiV Healthcare","keywords":"Viremia; Viral load; Virology; Tropism; Biology; Virus; Immunology; Tissue tropism; Viral replication","score_opus":0.01302596144109235,"score_gpt":0.2895641434673231,"score_spread":0.27653818202623076,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2795639631","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99772173,0.00029300014,0.00003327446,0.0010110205,0.000331926,0.00019569116,0.000027306556,0.0000025865354,0.00038344986],"genre_scores_gemma":[0.9985072,0.00006298912,0.00009622879,0.00022655052,0.000077510864,0.000004022371,0.0000060268794,0.000011702756,0.0010077802],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99750876,0.0009048586,0.0009032742,0.00020812247,0.00010254448,0.00037242088],"domain_scores_gemma":[0.99749345,0.00140026,0.00057924533,0.0002517269,0.00021327678,0.00006203707],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007780154,0.00014403445,0.0006242663,0.00008024735,0.000094696654,0.000006891087,0.0002767655,0.00038055415,0.00032361137],"category_scores_gemma":[0.00092494773,0.0000772192,0.0001283445,0.00009945507,0.0011992558,0.000086369124,0.0001621118,0.00092464796,0.000106700805],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010375777,0.00087469496,0.9587026,0.000009918744,0.0004924036,0.000054396165,0.00021862377,0.000012195753,0.022461738,0.00003801248,0.006399498,0.00036014433],"study_design_scores_gemma":[0.01330206,0.008551281,0.96342,0.0000705106,0.000100296194,0.000052739484,0.00006174321,0.000006837812,0.010784123,0.00044454797,0.0031131406,0.00009272535],"about_ca_topic_score_codex":0.0000173006,"about_ca_topic_score_gemma":0.00007200833,"teacher_disagreement_score":0.011677615,"about_ca_system_score_codex":0.000025704958,"about_ca_system_score_gemma":0.00019872678,"threshold_uncertainty_score":0.44187078},"labels":[],"label_agreement":null},{"id":"W2797647822","doi":"10.1016/j.jcv.2018.03.014","title":"Heterophilic interference in specimens yielding false-reactive results on the Abbott 4th generation ARCHITECT HIV Ag/Ab Combo assay","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; Memorial University of Newfoundland; Toronto Public Health; University of Alberta Hospital; Nova Scotia Health Authority; Dr. Georges-L.-Dumont University Hospital Centre; Manitoba Health; Alberta Hospital Edmonton; Saskatchewan Disease Control Laboratory","funders":"Centers for Disease Control and Prevention; Government of Canada","keywords":"Human immunodeficiency virus (HIV); Antibody; Medicine; Antigen; Virology; Immunology","score_opus":0.12572665348072876,"score_gpt":0.38890775269439787,"score_spread":0.2631810992136691,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2797647822","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9889231,0.00018980312,0.000316531,0.0071306275,0.001000809,0.00017678211,0.000031334494,0.000007011126,0.0022240048],"genre_scores_gemma":[0.9980486,0.00019661534,0.00007074206,0.00075366965,0.00056348136,0.0000058152787,0.000017712528,0.000009736013,0.00033365024],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9949074,0.0030913588,0.001242203,0.0002837693,0.00008088143,0.00039443676],"domain_scores_gemma":[0.99386847,0.00502296,0.0005894221,0.00031167993,0.00014292309,0.000064537555],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.004217572,0.00016500583,0.00056643883,0.00018650005,0.00013309732,0.000016937089,0.00037941884,0.00030798858,0.0003052875],"category_scores_gemma":[0.004065891,0.00009543203,0.00021654616,0.000104877094,0.00067212194,0.000063321946,0.000102157916,0.0015447234,0.0009358491],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.059049927,0.00621897,0.06890119,0.0000129420805,0.0031120884,0.0010173547,0.0028813574,0.00014452692,0.68531543,0.0036414107,0.062064927,0.10763989],"study_design_scores_gemma":[0.031348027,0.07440841,0.7117934,0.0003707211,0.00023155154,0.0012385625,0.00047100883,0.00035222023,0.09289037,0.0038499648,0.08232437,0.0007213874],"about_ca_topic_score_codex":0.000022542588,"about_ca_topic_score_gemma":0.00021840617,"teacher_disagreement_score":0.64289224,"about_ca_system_score_codex":0.000058392263,"about_ca_system_score_gemma":0.00011385527,"threshold_uncertainty_score":0.99984205},"labels":[],"label_agreement":null},{"id":"W2802808053","doi":"10.1016/j.jcv.2018.05.001","title":"Recovery of cytomegalovirus DNA from newborn saliva samples by different methods","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"","keywords":"Saliva; Nucleic acid; Polymerase chain reaction; Cytomegalovirus; DNA; Real-time polymerase chain reaction; Biology; Virology; Chromatography; Chemistry; Virus; Biochemistry; Herpesviridae; Viral disease","score_opus":0.12010792618892403,"score_gpt":0.4749327841910909,"score_spread":0.3548248580021669,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2802808053","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98403347,0.0012049327,0.009141755,0.002766607,0.0010510723,0.00016576034,0.0000902465,0.000012832977,0.0015333437],"genre_scores_gemma":[0.9591095,0.002736353,0.031312983,0.0027189814,0.0035629433,0.0000027537005,0.000015322059,0.000050852293,0.0004903439],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99465144,0.001193715,0.0027801997,0.00034831453,0.0005779361,0.00044837157],"domain_scores_gemma":[0.9918917,0.005149494,0.0013080464,0.0005222434,0.0005532125,0.00057529274],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0034677,0.00023926698,0.0020630755,0.00027502174,0.00005991636,0.000019832403,0.00042437334,0.00055689854,0.0027495879],"category_scores_gemma":[0.004488031,0.0001651596,0.00082513137,0.00020905894,0.0008893295,0.00012093259,0.0001778232,0.0012488371,0.00009027711],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.019389108,0.0018971831,0.111362614,0.000046825713,0.0015743476,0.0001230904,0.00014052787,8.102889e-7,0.34134915,0.000109407316,0.04858451,0.4754224],"study_design_scores_gemma":[0.0067071654,0.012529406,0.43918183,0.00011557921,0.00046119734,0.00012429463,0.000055116678,0.000090024296,0.049514424,0.0047362926,0.48627505,0.00020963674],"about_ca_topic_score_codex":0.00023142048,"about_ca_topic_score_gemma":0.00008329387,"teacher_disagreement_score":0.47521278,"about_ca_system_score_codex":0.000061870174,"about_ca_system_score_gemma":0.0003668706,"threshold_uncertainty_score":0.99816203},"labels":[],"label_agreement":null},{"id":"W2891974042","doi":"10.1016/j.jcv.2018.09.004","title":"Comparative performance of human papillomavirus messenger RNA versus DNA screening tests at baseline and 48 months in the HPV FOCAL trial","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McMaster University; BC Centre for Disease Control; St. Joseph’s Healthcare Hamilton; University of British Columbia; Provincial Health Services Authority; BC Cancer Agency","funders":"BC Cancer Agency; Canadian Institutes of Health Research; British Columbia Centre for Disease Control; Hologic","keywords":"Human papillomavirus; Baseline (sea); RNA; Oncology; Messenger RNA; Papillomaviridae; Biology; Medicine; Genetics; Internal medicine; Gene; Cancer; Cervical cancer","score_opus":0.2419818822448734,"score_gpt":0.5124180699588267,"score_spread":0.2704361877139533,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2891974042","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99330044,0.0005417584,0.000014607941,0.0018503827,0.00036067786,0.00024410748,0.0000026899984,0.000002717433,0.003682629],"genre_scores_gemma":[0.9967977,0.00029950877,0.0001639529,0.0006587206,0.0020084034,0.0000036076744,0.0000018613322,0.000008011876,0.00005823757],"study_design_codex":"randomized_trial","study_design_gemma":"observational","domain_scores_codex":[0.99707365,0.0006660812,0.0013555208,0.00017480075,0.0004743874,0.0002555514],"domain_scores_gemma":[0.9958471,0.002977758,0.00045614367,0.00019977202,0.000332239,0.00018695326],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0043007075,0.00011908943,0.000980647,0.00011547577,0.000087118955,0.000007194973,0.00020464667,0.00019494523,0.001214458],"category_scores_gemma":[0.0013519485,0.000070220136,0.00018919502,0.00015639522,0.0009093053,0.00007304106,0.000099762285,0.0009661236,0.0000108358],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.8130176,0.0014879766,0.08095363,0.00007988939,0.00038928096,0.0002128118,0.0008958229,0.000007649223,0.005521051,0.00011165858,0.005368083,0.091954514],"study_design_scores_gemma":[0.08179438,0.030056013,0.88197184,0.000028308315,0.00014142068,0.000057179757,0.00013647135,0.0010310408,0.0007781769,0.000055735018,0.0038715408,0.00007791303],"about_ca_topic_score_codex":0.00002505273,"about_ca_topic_score_gemma":0.00028552607,"teacher_disagreement_score":0.8010182,"about_ca_system_score_codex":0.000028016117,"about_ca_system_score_gemma":0.00012606327,"threshold_uncertainty_score":0.9996986},"labels":[],"label_agreement":null},{"id":"W2910718174","doi":"10.1016/j.jcv.2019.01.002","title":"Analysis of serum hepatitis B virus RNA levels in a multiethnic cohort of pregnant chronic hepatitis B carriers","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Hepatitis B virus; HBeAg; Medicine; HBsAg; Hepatitis B; Virology; Viral load; Liver disease; Immunology; Virus; Internal medicine","score_opus":0.05043700606859895,"score_gpt":0.3859991329978309,"score_spread":0.33556212692923193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2910718174","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99566716,0.0022471927,0.000108465916,0.0004891949,0.00075074565,0.0004166521,0.00013065885,0.000013241473,0.00017665916],"genre_scores_gemma":[0.983105,0.01574464,0.00044246324,0.00039549504,0.00016873633,0.000006489069,0.000003428394,0.000040729938,0.00009302466],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.993817,0.00067606074,0.00408143,0.00034883828,0.0006472697,0.00042943464],"domain_scores_gemma":[0.9946169,0.0016345417,0.0024048865,0.0005222291,0.00057462184,0.0002468247],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002756393,0.00024563502,0.0036997274,0.00081494584,0.00002209064,0.0000032495186,0.0002889801,0.00044531355,0.00053566083],"category_scores_gemma":[0.0028028863,0.00020013007,0.0011634432,0.00085558876,0.0005131576,0.00012438305,0.00013474637,0.0009412261,0.000021474201],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046297043,0.00043972488,0.9803589,0.0001372184,0.0049935747,0.00019036623,0.00035593603,0.00041885203,0.002643358,0.000020195717,0.00009528508,0.009883631],"study_design_scores_gemma":[0.0036875338,0.004783516,0.9846668,0.00038477522,0.0025925757,0.000029825016,0.000017523058,0.0022018536,0.0010248303,0.00005033056,0.0004163265,0.00014411558],"about_ca_topic_score_codex":0.0055617266,"about_ca_topic_score_gemma":0.043262072,"teacher_disagreement_score":0.037700348,"about_ca_system_score_codex":0.00020018674,"about_ca_system_score_gemma":0.0007037544,"threshold_uncertainty_score":0.9741959},"labels":[],"label_agreement":null},{"id":"W2920206267","doi":"10.1016/j.jcv.2019.03.002","title":"A comparison of the Quidel Solana HSV 1 + 2/VZV Assay, the Focus Diagnostics Simplexa HSV 1 &amp; 2 Direct Assay and the Luminex Aries HSV 1&amp;2 Assay for detection of herpes simplex virus 1 and 2 from swab specimens","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Electricity Association; Ottawa Hospital; Children's Hospital of Eastern Ontario","funders":"","keywords":"Herpes simplex virus; Virology; HSL and HSV; Biology; Virus; Molecular biology","score_opus":0.07965285206062664,"score_gpt":0.414399225973345,"score_spread":0.33474637391271833,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2920206267","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9882745,0.0018196667,0.003314597,0.004392467,0.0007861747,0.0007839618,0.00012387292,0.000010270908,0.00049448357],"genre_scores_gemma":[0.99699235,0.0011103913,0.0005318291,0.00059132633,0.0005462127,0.000015557533,0.0000065909885,0.000028995228,0.00017676583],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9955925,0.0014705043,0.0019716318,0.00028532406,0.0003788069,0.00030128597],"domain_scores_gemma":[0.9725454,0.024675649,0.0017955235,0.0004957022,0.0003426823,0.00014506973],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.004397046,0.0002653727,0.0016112714,0.00009041129,0.000212851,0.000031145766,0.00022537955,0.00038150887,0.00012695008],"category_scores_gemma":[0.008851469,0.00012525695,0.000549711,0.00015649406,0.00106712,0.00008221608,0.0001473425,0.000730959,0.000008319017],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011983669,0.0029027977,0.72642064,0.00011342255,0.0052407654,0.000013391502,0.0013982797,0.00017950762,0.0056873807,0.00086552853,0.0074869003,0.2377077],"study_design_scores_gemma":[0.013718208,0.0025254018,0.56324685,0.00012218686,0.0026559965,0.000113242444,0.00027307405,0.0014867216,0.0029705574,0.005714485,0.40696317,0.000210088],"about_ca_topic_score_codex":0.0007970676,"about_ca_topic_score_gemma":0.0035338497,"teacher_disagreement_score":0.39947626,"about_ca_system_score_codex":0.000040284838,"about_ca_system_score_gemma":0.00015518114,"threshold_uncertainty_score":0.9994974},"labels":[],"label_agreement":null},{"id":"W2923466622","doi":"10.1016/j.jcv.2019.03.014","title":"CMV-specific T-cells and CD27-CD28-CD4+ T-cells for assignment of cytomegalovirus (CMV) status in adults awaiting organ transplant","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Cytomegalovirus; Serology; Immunology; Antibody; Medicine; CD28; Virology; Immunoassay; Antigen; CD8; Virus; Herpesviridae; Viral disease","score_opus":0.04809692584868128,"score_gpt":0.36706343114993495,"score_spread":0.3189665053012537,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2923466622","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957974,0.0009005685,0.00032991276,0.0009406687,0.0006567629,0.0007637211,0.000081178325,0.0000074212003,0.00052235345],"genre_scores_gemma":[0.99126947,0.0062270933,0.0011607045,0.00056131283,0.0004924626,0.0000065741824,0.00000668967,0.000044921962,0.00023078197],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99519855,0.00033520625,0.0027663724,0.00042725657,0.00057092035,0.0007017138],"domain_scores_gemma":[0.99535435,0.0025801577,0.00095681165,0.00031999266,0.00029481738,0.0004938567],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003385926,0.00025496708,0.0017759488,0.00043746264,0.00004015481,0.000017350447,0.00023518968,0.0004650225,0.0003984794],"category_scores_gemma":[0.00029565356,0.00019806442,0.00043926103,0.00021856639,0.00041145366,0.00012562163,0.00006667613,0.0012542331,0.00004898592],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.051251378,0.0031707683,0.3221411,0.0010362837,0.00061869714,0.0006879607,0.0015072373,0.00010077302,0.55839485,0.00043231648,0.002153066,0.058505584],"study_design_scores_gemma":[0.11169644,0.04112165,0.49168387,0.002480578,0.000565819,0.0007099547,0.0018982375,0.0028331655,0.106355235,0.0009796913,0.23859607,0.0010792959],"about_ca_topic_score_codex":0.00005808072,"about_ca_topic_score_gemma":0.000064669824,"teacher_disagreement_score":0.4520396,"about_ca_system_score_codex":0.00009337243,"about_ca_system_score_gemma":0.0004266956,"threshold_uncertainty_score":0.8076832},"labels":[],"label_agreement":null},{"id":"W2944841558","doi":"10.1016/j.jcv.2019.05.010","title":"What is the role of rapid molecular testing for seniors and other at-risk adults with respiratory syncytial virus infections?","year":2019,"lang":"en","type":"review","venue":"Journal of Clinical Virology","topic":"Respiratory viral infections research","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Alberta Hospital","funders":"Janssen Pharmaceuticals","keywords":"Medicine; Intensive care medicine; Respiratory tract infections; Disease; Clinical trial; Lower respiratory tract infection; Pediatrics; Respiratory system; Internal medicine","score_opus":0.1404667769880471,"score_gpt":0.4772076108906771,"score_spread":0.33674083390263,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2944841558","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07816824,0.91938853,0.00006368862,0.00011189476,0.0005096702,0.0015164438,0.000034719647,0.000009504072,0.0001973074],"genre_scores_gemma":[0.0016764263,0.99556947,0.00029335188,0.001240269,0.0009965292,0.00005870281,0.0000016533972,0.000101026,0.00006254519],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99434286,0.0017178315,0.0027195679,0.00041802676,0.00045791353,0.00034377418],"domain_scores_gemma":[0.98836595,0.006765379,0.0032954938,0.00062169996,0.00070754485,0.00024391888],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004345884,0.00035674594,0.0030457308,0.00042064366,0.00013953062,0.000037270027,0.00026591093,0.00080483954,0.00009842207],"category_scores_gemma":[0.004937868,0.0001918205,0.0010582383,0.00038024358,0.00074671226,0.00015475592,0.00014745822,0.0021347182,0.000024151548],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019571283,0.00034486238,0.011884755,0.002734589,0.001473439,0.000043788114,0.000042245898,0.0000074317227,0.00010899097,0.000021075224,0.00023028562,0.9811514],"study_design_scores_gemma":[0.0028552418,0.019141356,0.0008890643,0.0049574426,0.0027244168,0.0007831398,0.000039553455,0.000030508156,0.000060963863,0.00006383512,0.9682796,0.00017486428],"about_ca_topic_score_codex":0.000023017943,"about_ca_topic_score_gemma":0.000020097037,"teacher_disagreement_score":0.9809765,"about_ca_system_score_codex":0.0000844164,"about_ca_system_score_gemma":0.0010291052,"threshold_uncertainty_score":0.9274407},"labels":[],"label_agreement":null},{"id":"W2949694226","doi":"10.1016/j.jcv.2019.04.010","title":"Comparison of two automated methods for detection and differentiation of herpes simplex virus in clinical specimens","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network; Mount Sinai Hospital; Nova Scotia Health Authority; Dalhousie University","funders":"Health Canada; Canadian Immunization Research Network; Hologic; GlaxoSmithKline","keywords":"Herpes simplex virus; Virology; Viral load; Biology; Virus; Real-time polymerase chain reaction; Medicine; Molecular biology; Gene","score_opus":0.1407250644248247,"score_gpt":0.5773025661811266,"score_spread":0.43657750175630194,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2949694226","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.990356,0.00012814163,0.008323847,0.00012328543,0.0006922633,0.00028808686,0.000004233695,0.000009335601,0.000074790114],"genre_scores_gemma":[0.9873674,0.00014977294,0.012233413,0.00007315275,0.00014637547,0.000002381972,0.000002120147,0.000010273445,0.000015133315],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99630415,0.0006811765,0.0026350815,0.00015027104,0.000102503196,0.00012679555],"domain_scores_gemma":[0.99524695,0.002859365,0.0014655575,0.00014157237,0.00019057714,0.00009595337],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002593725,0.00009746827,0.0013498553,0.00017832415,0.000015106049,0.0000027407868,0.000047019206,0.00027096822,0.00007321291],"category_scores_gemma":[0.0012021392,0.00007238773,0.00032581022,0.0001060451,0.00012867534,0.000053049127,0.000023998678,0.00031562842,0.000002708029],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023532284,0.0020516524,0.5594767,0.000046919416,0.00037400212,0.000002435025,0.000039196522,0.00003340232,0.008537664,0.000054488348,0.000022162505,0.4270082],"study_design_scores_gemma":[0.011240686,0.0063717123,0.9490588,0.000050460767,0.00035830963,0.000023391061,0.000023425946,0.019515205,0.008234423,0.0006337407,0.0044374396,0.000052444415],"about_ca_topic_score_codex":0.000029458002,"about_ca_topic_score_gemma":0.00006764688,"teacher_disagreement_score":0.42695576,"about_ca_system_score_codex":0.00002227535,"about_ca_system_score_gemma":0.00006825926,"threshold_uncertainty_score":0.2951886},"labels":[],"label_agreement":null},{"id":"W2991105796","doi":"10.1016/j.jcv.2019.104231","title":"Blood viral load in the diagnostic workup of congenital cytomegalovirus infection","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; University of Toronto; SickKids Foundation; Université de Montréal; Université Laval; Hospital for Sick Children","funders":"Fonds de Recherche du Québec - Santé","keywords":"Asymptomatic; Medicine; Cytomegalovirus; Univariate analysis; Viral load; Internal medicine; Logistic regression; Human cytomegalovirus; Retrospective cohort study; Pediatrics; Viremia; Gastroenterology; Immunology; Viral disease; Herpesviridae; Multivariate analysis; Human immunodeficiency virus (HIV); Virus","score_opus":0.04937124361311147,"score_gpt":0.39733588493074085,"score_spread":0.3479646413176294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2991105796","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939156,0.0006658075,0.000014037369,0.0018867411,0.000576445,0.0003221586,0.0000036823312,0.0000043791642,0.0026111498],"genre_scores_gemma":[0.99665534,0.0011730151,0.00006169708,0.0013218804,0.0006522434,0.000003636245,0.0000011394527,0.000014287734,0.00011676415],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9965741,0.0005799088,0.0017339177,0.00017789342,0.0006284789,0.00030569703],"domain_scores_gemma":[0.9937186,0.004984014,0.00063035154,0.00030756163,0.00020855325,0.00015087053],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0043619447,0.00013325979,0.0009609403,0.00024036631,0.000023265808,0.000013935042,0.0002413629,0.00033001637,0.0004959574],"category_scores_gemma":[0.004993193,0.000082530096,0.0004748232,0.00029569215,0.00028555078,0.00012154961,0.000065013155,0.0016137842,0.00013952226],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0033430038,0.0015348017,0.9799337,0.000044493274,0.00027649058,0.0004701327,0.00013615853,0.000022136002,0.0030497657,0.00023107625,0.0006514183,0.01030687],"study_design_scores_gemma":[0.007426997,0.00629283,0.9664815,0.00006731943,0.00022113913,0.0005562035,0.000037235026,0.000051138923,0.00027060622,0.0003716097,0.01814561,0.00007782714],"about_ca_topic_score_codex":0.00012692278,"about_ca_topic_score_gemma":0.00016615134,"teacher_disagreement_score":0.017494192,"about_ca_system_score_codex":0.00004051158,"about_ca_system_score_gemma":0.00048001696,"threshold_uncertainty_score":0.70111793},"labels":[],"label_agreement":null},{"id":"W3000432595","doi":"10.1016/j.jcv.2020.104281","title":"Demographic, clinical, and virological characteristics of patients with a laboratory-confirmed diagnosis of influenza during three consecutive seasons, 2015/2016–2017/18, in the Islamic Republic of Iran","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Medicine; Internal medicine; Comorbidity; Demographics; Population; Mortality rate; Logistic regression; Christian ministry; Disease; Multivariate analysis; Pediatrics; Demography","score_opus":0.15265228797141336,"score_gpt":0.4328313901118787,"score_spread":0.2801791021404654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3000432595","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942052,0.00091562455,0.0000126769,0.0040743193,0.0000864507,0.0005351106,0.0001337612,0.000005173892,0.00003168457],"genre_scores_gemma":[0.99323976,0.0031638166,0.0002456445,0.0031568236,0.00016271035,0.0000117311865,0.000002469964,0.000016347238,7.064621e-7],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9938115,0.0014801151,0.003348177,0.00032278846,0.0006869418,0.00035048078],"domain_scores_gemma":[0.98951346,0.0057915547,0.0028915082,0.0003731976,0.001195698,0.00023459928],"candidate_categories":["metaresearch","sts"],"consensus_categories":[],"category_scores_codex":[0.0039489632,0.00023167105,0.0022964426,0.00024316036,0.000049591225,0.000007626659,0.00039904402,0.0004146441,0.000056084475],"category_scores_gemma":[0.022784865,0.00013314153,0.00034430635,0.0004897557,0.0033278028,0.00011933263,0.00020700757,0.0016244737,0.0000012593594],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.016750572,0.0012540926,0.97906035,0.00019223853,0.0007091568,0.00012127595,0.00036329954,0.0000013551014,0.00018401758,0.000059736776,0.0005506654,0.00075324543],"study_design_scores_gemma":[0.01123975,0.010902918,0.97604865,0.00018640717,0.00032551875,0.000012071706,0.00016488711,0.000020753338,0.00006061578,0.00010936524,0.0008281018,0.00010098432],"about_ca_topic_score_codex":0.0000119717015,"about_ca_topic_score_gemma":0.000029030627,"teacher_disagreement_score":0.018835902,"about_ca_system_score_codex":0.0000108964805,"about_ca_system_score_gemma":0.00038505203,"threshold_uncertainty_score":0.9993846},"labels":[],"label_agreement":null},{"id":"W3014257517","doi":"10.1016/j.jcv.2020.104341","title":"Challenges of SARS-CoV-2 and lessons learnt from SARS in Guangdong Province, China","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"COVID-19 epidemiological studies","field":"Mathematics","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Impact","funders":"","keywords":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); China; 2019-20 coronavirus outbreak; Sars virus; Betacoronavirus; Virology; Geography; Medicine; Environmental health; Outbreak; Infectious disease (medical specialty); Disease; Internal medicine","score_opus":0.6398384978464725,"score_gpt":0.5501262236204263,"score_spread":0.08971227422604622,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3014257517","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8980369,0.001996454,0.00044964804,0.09891041,0.00012897632,0.00011019895,0.0000062622494,0.000010745414,0.0003503925],"genre_scores_gemma":[0.98786473,0.00482805,0.003972178,0.0029778497,0.00033878296,0.0000017022867,2.3414486e-7,0.0000130130165,0.0000034546454],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99606836,0.0009883763,0.00221177,0.00029946116,0.00019297065,0.00023908188],"domain_scores_gemma":[0.98736453,0.010908178,0.0013905809,0.0001693304,0.000065167595,0.00010222156],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0029167063,0.00016772517,0.0017689525,0.000059186874,0.000026940705,0.000004568624,0.0003105651,0.00032600158,0.0000150143605],"category_scores_gemma":[0.033727597,0.00011588741,0.00027813023,0.00008008717,0.00038131964,0.00007007082,0.00029792366,0.0010051451,0.000004873962],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006364576,0.0031841216,0.7053737,0.000759214,0.0015750184,0.0011267585,0.0043143737,0.00009829869,0.015190583,0.06354805,0.01670826,0.18175703],"study_design_scores_gemma":[0.0020735064,0.0021330693,0.8031909,0.00008852485,0.00010564167,0.000012771545,0.0001282488,0.00033847272,0.00026588753,0.18503387,0.0064847274,0.00014437673],"about_ca_topic_score_codex":0.000060078735,"about_ca_topic_score_gemma":0.00038990876,"teacher_disagreement_score":0.18161266,"about_ca_system_score_codex":0.000019368672,"about_ca_system_score_gemma":0.000080614875,"threshold_uncertainty_score":0.9744117},"labels":[],"label_agreement":null},{"id":"W3014462731","doi":"10.1016/j.jcv.2020.104338","title":"Severity of coronavirus respiratory tract infections in adults admitted to acute care in Toronto, Ontario","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Respiratory viral infections research","field":"Medicine","cited_by":65,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto; Sunnybrook Hospital; Health Sciences Centre; Sunnybrook Health Science Centre","funders":"","keywords":"Medicine; Intensive care unit; Epidemiology; Respiratory tract infections; Intensive care medicine; Disease; Respiratory tract; Disease burden; Coronavirus; Intensive care; Respiratory system; Emergency medicine; Internal medicine; Pediatrics; Coronavirus disease 2019 (COVID-19); Infectious disease (medical specialty)","score_opus":0.13176327808934718,"score_gpt":0.48994427305190796,"score_spread":0.3581809949625608,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3014462731","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962476,0.0003728864,0.000029782872,0.0011731862,0.00032071103,0.00038716395,0.000008172588,0.000008809263,0.0014516981],"genre_scores_gemma":[0.995185,0.0000989917,0.00020977853,0.004150756,0.0003077045,0.000009145326,0.0000015282807,0.000016375354,0.000020677471],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9961417,0.0006720142,0.002270651,0.00026703157,0.00036077644,0.000287858],"domain_scores_gemma":[0.99781156,0.00054330303,0.0004782716,0.00024081407,0.000408103,0.0005179528],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012671975,0.00014962633,0.0011075368,0.0002491586,0.000024166678,0.000006027152,0.00019753986,0.0003917673,0.00076905685],"category_scores_gemma":[0.00306068,0.00013118512,0.00031352893,0.0003991164,0.0001442634,0.00021783172,0.00009035254,0.0018521072,0.000028808168],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008495085,0.0013092771,0.97161466,0.000038880888,0.00009024737,0.00055287365,0.00082823634,0.00007443326,0.0014290694,0.000013956233,0.00019751406,0.015355767],"study_design_scores_gemma":[0.006368915,0.022424448,0.9515778,0.000107062675,0.00005334158,0.000076835364,0.00021428104,0.000021391146,0.00018254612,0.000013718553,0.018870734,0.00008893598],"about_ca_topic_score_codex":0.00781392,"about_ca_topic_score_gemma":0.19738068,"teacher_disagreement_score":0.18956675,"about_ca_system_score_codex":0.00069832965,"about_ca_system_score_gemma":0.0014454694,"threshold_uncertainty_score":0.9987931},"labels":[],"label_agreement":null},{"id":"W3019019024","doi":"10.1016/j.jcv.2020.104387","title":"Detection of low levels of SARS-CoV-2 RNA from nasopharyngeal swabs using three commercial molecular assays","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"SARS-CoV-2 detection and testing","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia; Providence Health Care","funders":"","keywords":"Concordance; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); Medicine; Virology; 2019-20 coronavirus outbreak; Internal medicine","score_opus":0.23868751200878308,"score_gpt":0.42679315898793563,"score_spread":0.18810564697915255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3019019024","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9695364,0.00024956267,0.0282656,0.00076684536,0.00086601573,0.000121515244,0.000011781677,0.000016165715,0.00016607578],"genre_scores_gemma":[0.9892857,0.000010834638,0.0034807564,0.006097885,0.0010963457,4.5128616e-7,6.5180683e-7,0.000027007149,3.8146104e-7],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9965381,0.00036723714,0.002260928,0.00022341513,0.00040330386,0.00020702192],"domain_scores_gemma":[0.9963577,0.0010767829,0.0018528019,0.00019476563,0.00039911357,0.000118830394],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010986445,0.00017108645,0.0013290431,0.00014155194,0.000037201517,0.000005738345,0.00018679496,0.00040203647,0.00003558397],"category_scores_gemma":[0.0044919527,0.00015047874,0.0006008764,0.00024232619,0.00025349902,0.00009607013,0.00007603047,0.0010905744,0.000007245766],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024014316,0.00022680085,0.013769157,0.000042503572,0.00030057674,0.00021217602,0.00006871064,0.000028855555,0.96053016,0.000008530262,0.000021054459,0.022390047],"study_design_scores_gemma":[0.00495085,0.0032980223,0.06900576,0.00012323826,0.0004124635,0.00019237357,0.000021487547,0.0066614687,0.9145345,0.0005073174,0.00018821943,0.000104307415],"about_ca_topic_score_codex":0.000072606024,"about_ca_topic_score_gemma":0.000031293534,"teacher_disagreement_score":0.055236597,"about_ca_system_score_codex":0.000029235298,"about_ca_system_score_gemma":0.00020731938,"threshold_uncertainty_score":0.61363447},"labels":[],"label_agreement":null},{"id":"W3020950648","doi":"10.1016/j.jcv.2020.104423","title":"SARS-CoV-2 detection by direct rRT-PCR without RNA extraction","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"SARS-CoV-2 detection and testing","field":"Medicine","cited_by":112,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Université du Québec à Trois-Rivières; Centre intégré universitaire de santé et de services sociaux de la Mauricie-et-du-Centre-du-Québec","funders":"","keywords":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); RNA extraction; RNA; Virology; Coronavirus disease 2019 (COVID-19); Extraction (chemistry); 2019-20 coronavirus outbreak; Pandemic; Real-time polymerase chain reaction; Biology; Medicine; Chromatography; Chemistry; Gene; Internal medicine; Genetics; Disease","score_opus":0.14653676954788453,"score_gpt":0.44031988416212886,"score_spread":0.29378311461424433,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3020950648","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98392737,0.00023201975,0.006600198,0.0044567003,0.001615876,0.000128684,0.0000015158587,0.00007884357,0.0029587797],"genre_scores_gemma":[0.9778214,0.00006812354,0.00077408843,0.019060243,0.0022105887,0.0000020875323,7.487417e-7,0.000030468973,0.00003225943],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971638,0.00037161587,0.0016229248,0.00027654352,0.0003214909,0.00024367128],"domain_scores_gemma":[0.99741036,0.00084535003,0.0011766958,0.00015259522,0.000242042,0.00017297055],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013169344,0.0001727871,0.0008865819,0.00011583814,0.00007432223,0.000018520504,0.00011267619,0.00038854126,0.00004306381],"category_scores_gemma":[0.006807128,0.00014096963,0.00043464627,0.00023105861,0.00013114797,0.0001733454,0.000028829585,0.0014882401,0.000104106046],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002475925,0.00021018912,0.00949111,0.000016957247,0.00014838192,0.00013002074,0.00003919528,0.000002184899,0.9289599,0.0000018129998,0.0025224697,0.056001853],"study_design_scores_gemma":[0.00473938,0.005707787,0.012035499,0.000039474777,0.00034181454,0.0015689007,0.000036087953,0.0026193007,0.84760994,0.00008762864,0.125054,0.00016017299],"about_ca_topic_score_codex":0.000016322534,"about_ca_topic_score_gemma":0.000012914568,"teacher_disagreement_score":0.12253153,"about_ca_system_score_codex":0.000042995365,"about_ca_system_score_gemma":0.00009683726,"threshold_uncertainty_score":0.81492597},"labels":[],"label_agreement":null},{"id":"W3024861400","doi":"10.1016/j.jcv.2020.104442","title":"A combined oropharyngeal/nares swab is a suitable alternative to nasopharyngeal swabs for the detection of SARS-CoV-2","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"SARS-CoV-2 detection and testing","field":"Medicine","cited_by":105,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Nova Scotia Health Authority; Dalhousie University","funders":"Department of Health, Western Cape Government; Nova Scotia Department of Health and Wellness","keywords":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); Economic shortage; 2019-20 coronavirus outbreak; Pandemic; Virology; Medicine; Internal medicine; Infectious disease (medical specialty)","score_opus":0.18008278718026058,"score_gpt":0.4311628049837301,"score_spread":0.25108001780346956,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3024861400","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9738772,0.00031784247,0.009913319,0.014012389,0.0011537877,0.00051964493,0.0000116249985,0.000025539532,0.00016866134],"genre_scores_gemma":[0.9557913,0.000047512334,0.0010271245,0.04165367,0.0014115188,0.000013504293,5.485439e-7,0.000029117491,0.0000257092],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971701,0.00023317125,0.0017039239,0.00026864052,0.0003371886,0.00028701097],"domain_scores_gemma":[0.99462795,0.0032940756,0.0011023845,0.00020506041,0.0006157404,0.00015478175],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014841288,0.00018058579,0.0010860919,0.0001346187,0.0000931785,0.00001461452,0.00027805325,0.0002212572,0.00003361425],"category_scores_gemma":[0.008052298,0.00012164115,0.0005744036,0.00030964456,0.00016438038,0.000103729915,0.0000863676,0.0008087527,0.000023671058],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.018845834,0.00039497702,0.004477598,0.000085831976,0.00071892916,0.000105608306,0.00066695927,0.000022994189,0.9482912,0.00004567494,0.0034346373,0.022909794],"study_design_scores_gemma":[0.012640598,0.027271766,0.0152610205,0.000089286186,0.000632124,0.00031148756,0.00017962957,0.00942035,0.89729136,0.00074502884,0.03598074,0.00017663126],"about_ca_topic_score_codex":0.00004689948,"about_ca_topic_score_gemma":0.000022332339,"teacher_disagreement_score":0.050999824,"about_ca_system_score_codex":0.0000333817,"about_ca_system_score_gemma":0.0001703704,"threshold_uncertainty_score":0.96399343},"labels":[],"label_agreement":null},{"id":"W3025007192","doi":"10.1016/j.jcv.2020.104433","title":"Real-time PCR-based SARS-CoV-2 detection in Canadian laboratories","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"SARS-CoV-2 detection and testing","field":"Medicine","cited_by":149,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Mount Sinai Hospital; Sunnybrook Hospital; BC Centre for Disease Control; Sunnybrook Health Science Centre; St. Michael's Hospital; Saskatchewan Health; Dr. Georges-L.-Dumont University Hospital Centre; St. Joseph’s Healthcare Hamilton; Institut National de Santé Publique du Québec; University of Toronto; St. John’s Health Sciences Centre; Ste. Anne's Hospital; Dalhousie University; Public Health Agency of Canada; Saskatchewan Health Authority; Nova Scotia Health Authority; Toronto Public Health; Public Health Ontario; Hospital for Sick Children","funders":"Nationale Genossenschaft für die Lagerung radioaktiver Abfälle; University of Saskatchewan","keywords":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); 2019-20 coronavirus outbreak; Pandemic; Virology; Medicine; Infectious disease (medical specialty); Outbreak; Pathology","score_opus":0.0972169457826368,"score_gpt":0.3967819739354854,"score_spread":0.29956502815284863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3025007192","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99003786,0.00003844447,0.000115168,0.007921477,0.0006075468,0.000095505304,0.0000026631176,0.000029335855,0.0011520123],"genre_scores_gemma":[0.9758973,0.000014963404,0.0007942889,0.022298327,0.0009674022,0.0000014142166,7.2415577e-7,0.00001948794,0.000006094919],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977175,0.0003137813,0.0012934392,0.0001881909,0.00018645494,0.0003006375],"domain_scores_gemma":[0.998131,0.0006989836,0.00049150776,0.0001252595,0.00027416865,0.00027911132],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0013145772,0.00012423821,0.0007041464,0.00024331523,0.00004381002,0.000012731389,0.00010301766,0.00033190154,0.000042353324],"category_scores_gemma":[0.00855581,0.00010824383,0.00018979711,0.00047581497,0.000119091215,0.000077470715,0.000012791497,0.00096278865,0.00008774976],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020414258,0.00013232572,0.10212662,0.000024986562,0.00007091482,0.0011412958,0.00008919063,0.000012526696,0.8832856,0.000016076881,0.00075216923,0.010306864],"study_design_scores_gemma":[0.011931273,0.009946549,0.20421594,0.00012383724,0.00024986928,0.0006500395,0.00008499277,0.011035567,0.63756675,0.00029700925,0.12355762,0.00034055338],"about_ca_topic_score_codex":0.0067844335,"about_ca_topic_score_gemma":0.026625393,"teacher_disagreement_score":0.24571887,"about_ca_system_score_codex":0.00009755612,"about_ca_system_score_gemma":0.0011173865,"threshold_uncertainty_score":0.9998295},"labels":[],"label_agreement":null},{"id":"W3033458811","doi":"10.1016/j.jcv.2020.104485","title":"AusDiagnostics SARS-CoV-2 kits shown to be more sensitive than reference laboratory test","year":2020,"lang":"en","type":"letter","venue":"Journal of Clinical Virology","topic":"COVID-19 Clinical Research Studies","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Cytodiagnostics (Canada)","funders":"","keywords":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); 2019-20 coronavirus outbreak; Virology; Test (biology); Betacoronavirus; Medicine; Biology; Internal medicine","score_opus":0.22418890244221093,"score_gpt":0.5163705085570038,"score_spread":0.29218160611479294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3033458811","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.032570284,0.0001244647,0.00023653371,0.96431655,0.001378789,0.00058161846,0.00046462446,0.000044048506,0.00028309558],"genre_scores_gemma":[0.045734715,0.0023086905,0.00091631134,0.93357736,0.016998576,0.000012706717,0.00004598239,0.00009870021,0.00030697483],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9909122,0.0013303427,0.0040326794,0.00096207584,0.0017936016,0.00096909585],"domain_scores_gemma":[0.8477469,0.1440627,0.002478423,0.001055864,0.0036016204,0.0010544873],"candidate_categories":["metaresearch","metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.0030176288,0.0006448778,0.004276052,0.0004071254,0.00010623274,0.000035817735,0.0008301383,0.0022956247,0.00008212691],"category_scores_gemma":[0.5041208,0.00048608298,0.0010217164,0.0005542044,0.0013456028,0.00008933415,0.0008539494,0.015881289,0.00035213653],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016963675,0.00042033978,0.010710517,0.0003375012,0.00089818565,0.03516681,0.00013237058,0.000003300865,0.0011536602,0.000007363946,0.94853073,0.0009428253],"study_design_scores_gemma":[0.0025047646,0.012398853,0.042798094,0.00048641308,0.00092706905,0.00007732558,0.00002590552,0.000035426172,0.00030723063,0.0002177531,0.9398452,0.0003759488],"about_ca_topic_score_codex":0.000022921533,"about_ca_topic_score_gemma":0.000026412365,"teacher_disagreement_score":0.5011032,"about_ca_system_score_codex":0.00020607152,"about_ca_system_score_gemma":0.0029493312,"threshold_uncertainty_score":0.9997591},"labels":[],"label_agreement":null},{"id":"W3046865848","doi":"10.1016/j.jcv.2020.104565","title":"Influenza virus detection in the stool of children with acute gastroenteritis","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Provincial Laboratory of Public Health; Alberta Children's Hospital; Women and Children’s Health Research Institute; University of Alberta; University of Calgary","funders":"Canadian Institutes of Health Research; Norges Idrettshøgskole; National Institute of Diabetes and Digestive and Kidney Diseases; Alberta Children's Hospital Foundation","keywords":"Acute gastroenteritis; Medicine; Virology; Virus; Microbiology; Biology","score_opus":0.07831496859035875,"score_gpt":0.4173405117379195,"score_spread":0.3390255431475607,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3046865848","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9880899,0.000111327245,0.001431642,0.010078243,0.000067514135,0.00017094739,0.000009193152,0.000003586319,0.00003763783],"genre_scores_gemma":[0.9852456,0.0005417016,0.0007278937,0.013024732,0.0004442165,0.0000030641309,0.0000017667063,0.000008952008,0.0000020632995],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9970843,0.00084642164,0.0013919293,0.00014488962,0.00025272593,0.00027972998],"domain_scores_gemma":[0.9987601,0.00016833277,0.0005921693,0.000138076,0.000117845535,0.00022347896],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014871605,0.00009904351,0.00086587004,0.00008616613,0.000017496059,0.000004437035,0.00022932579,0.00012552238,0.000052084317],"category_scores_gemma":[0.001788193,0.00005649413,0.0002428857,0.00013574687,0.00033195314,0.00007843999,0.000045235596,0.0011193908,0.0000063092475],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.022760788,0.00036886963,0.9450549,0.000016516477,0.00045132503,0.0007041863,0.000087979286,0.00003045367,0.012025621,0.000005625867,0.0007291657,0.017764555],"study_design_scores_gemma":[0.0057994286,0.029892059,0.9597631,0.000037678634,0.00011030101,0.003056726,0.000040214534,0.000081268496,0.0002372261,0.000033461496,0.0009176491,0.00003087697],"about_ca_topic_score_codex":0.000025712136,"about_ca_topic_score_gemma":0.000071029885,"teacher_disagreement_score":0.029523188,"about_ca_system_score_codex":0.000012157318,"about_ca_system_score_gemma":0.000080887185,"threshold_uncertainty_score":0.48632586},"labels":[],"label_agreement":null},{"id":"W3049427668","doi":"10.1016/j.jcv.2020.104595","title":"Detection of Ebola virus from skin ulcers after clearance of viremia","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women and Children’s Health Research Institute; University of Alberta","funders":"","keywords":"Viremia; Ebolavirus; Ebola virus; Virology; Medicine; Transmission (telecommunications); Virus; Immunology","score_opus":0.06706014799590021,"score_gpt":0.4150814138002214,"score_spread":0.3480212658043212,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3049427668","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99523526,0.00032903487,0.0018081743,0.0019293319,0.00031630718,0.00007831368,0.000009105273,0.0000045464694,0.0002899375],"genre_scores_gemma":[0.9970681,0.0005291074,0.00035761308,0.0012077822,0.00080121914,0.0000011114536,5.115518e-7,0.000011542418,0.000022978189],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9977917,0.0002703977,0.0013871882,0.00013742031,0.0002742617,0.00013905053],"domain_scores_gemma":[0.9982926,0.00046355656,0.0006357497,0.00012954853,0.00025839452,0.00022010319],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007101569,0.000082931765,0.000778675,0.0000924585,0.000015569683,0.000002992052,0.00009939652,0.00025786253,0.0004248763],"category_scores_gemma":[0.0011520573,0.00006234181,0.0004440628,0.00016775091,0.00026685337,0.00006967933,0.000044138098,0.00085826823,0.000027576612],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.031515624,0.0005981682,0.051985413,0.00008132804,0.0005108853,0.00017389114,0.00018858965,0.00006513573,0.80755174,0.00001340106,0.00042183552,0.106893994],"study_design_scores_gemma":[0.0037381912,0.008044393,0.8872619,0.00006544632,0.00020221763,0.00006223712,0.000044697907,0.00084190734,0.09035325,0.00016951507,0.009148317,0.0000678992],"about_ca_topic_score_codex":0.000098441764,"about_ca_topic_score_gemma":0.00003494628,"teacher_disagreement_score":0.83527654,"about_ca_system_score_codex":0.000016022877,"about_ca_system_score_gemma":0.00011951024,"threshold_uncertainty_score":0.46520975},"labels":[],"label_agreement":null},{"id":"W3058601320","doi":"10.1016/j.jcv.2020.104581","title":"Assessing oligonucleotide designs from early lab developed PCR diagnostic tests for SARS-CoV-2 using the PCR_strainer pipeline","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"SARS-CoV-2 detection and testing","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Centre for Disease Control; University of British Columbia","funders":"British Columbia Ministry of Agriculture and Lands","keywords":"Primer (cosmetics); Biology; Computational biology; Genome; Oligonucleotide; Genetics; Virology; Molecular Inversion Probe; Molecular diagnostics; Whole genome sequencing; Gene; Single-nucleotide polymorphism; Genotype","score_opus":0.4363127317136676,"score_gpt":0.4824069777459032,"score_spread":0.04609424603223561,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3058601320","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9153578,0.00018423,0.075476274,0.0077234986,0.0008111724,0.0002714231,0.0000059719287,0.000039480812,0.00013014572],"genre_scores_gemma":[0.92576396,0.000017973203,0.0371872,0.033861782,0.0031132034,0.0000032741473,0.000001712704,0.00004609247,0.000004772842],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9965487,0.00045209503,0.002035163,0.0003085929,0.00029202225,0.0003634003],"domain_scores_gemma":[0.98401594,0.0139049385,0.0012187787,0.00020971354,0.00048575876,0.0001648578],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0018714811,0.00022549757,0.0010063213,0.000088926325,0.00015282964,0.000075551274,0.00026128688,0.00029445908,0.000021034768],"category_scores_gemma":[0.04851299,0.00015070793,0.0004372245,0.00026949972,0.00023419567,0.0002088878,0.00007256235,0.0011482694,0.00001941543],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016520309,0.0003156531,0.0760125,0.000037257952,0.00039541523,0.00063897675,0.0003461306,0.000052538715,0.888884,0.000029556835,0.0019733869,0.029662572],"study_design_scores_gemma":[0.026356734,0.007858099,0.6043302,0.00077441725,0.003264735,0.0022839764,0.00054921757,0.05383794,0.25918633,0.002894698,0.037737995,0.00092569616],"about_ca_topic_score_codex":0.000039570514,"about_ca_topic_score_gemma":0.00002071339,"teacher_disagreement_score":0.6296977,"about_ca_system_score_codex":0.000035531262,"about_ca_system_score_gemma":0.0004637243,"threshold_uncertainty_score":0.9595018},"labels":[],"label_agreement":null},{"id":"W3083320765","doi":"10.1016/j.jcv.2020.104615","title":"Comparison of SARS-CoV-2 detection from combined nasopharyngeal/oropharyngeal swab samples by a laboratory-developed real-time RT-PCR test and the Roche SARS-CoV-2 assay on a cobas 8800 instrument","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"SARS-CoV-2 detection and testing","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de Santé Publique du Québec; Centre Hospitalier de l’Université de Montréal; Hôpital Maisonneuve-Rosemont; Université de Montréal","funders":"","keywords":"Concordance; Medicine; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Kappa; Coronavirus disease 2019 (COVID-19); Real-time polymerase chain reaction; Polymerase chain reaction; Virology; Internal medicine; Biology; Gene","score_opus":0.13036416880821908,"score_gpt":0.39632467165715757,"score_spread":0.26596050284893846,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3083320765","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9908309,0.00035008663,0.00043070177,0.006844203,0.0005804185,0.0004829569,0.00006305119,0.00007260412,0.00034508933],"genre_scores_gemma":[0.9824668,0.00017573463,0.0012102788,0.015400093,0.00066547573,0.000010357309,0.000011094308,0.000054132466,0.000006042467],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9939666,0.0013663877,0.003091009,0.00052919413,0.0006551817,0.00039162705],"domain_scores_gemma":[0.98998547,0.006502223,0.002458021,0.0003543719,0.00051498896,0.0001849526],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0026419996,0.0004102327,0.002452651,0.0001631463,0.0001643721,0.000043593966,0.00033549627,0.0005252914,0.00003077334],"category_scores_gemma":[0.011048444,0.00028957793,0.00040187134,0.00046794684,0.0006961203,0.00014844112,0.00014066606,0.0017534745,0.000046846966],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.012750428,0.0008752189,0.020218972,0.000044352142,0.00049733475,0.000074719545,0.00035817898,0.0000019789843,0.95208615,0.000019793257,0.004244122,0.008828778],"study_design_scores_gemma":[0.026574655,0.011609146,0.03937554,0.00016888833,0.00069742143,0.000114396986,0.00013407298,0.005917882,0.90640664,0.00026608442,0.008430254,0.0003050107],"about_ca_topic_score_codex":0.0002455899,"about_ca_topic_score_gemma":0.00006328982,"teacher_disagreement_score":0.045679476,"about_ca_system_score_codex":0.000083724255,"about_ca_system_score_gemma":0.0003514169,"threshold_uncertainty_score":0.99995565},"labels":[],"label_agreement":null},{"id":"W3107794479","doi":"10.1016/j.jcv.2020.104709","title":"Self-reported influenza and influenza-like symptoms in U.S. adults age 18–64 between September 1, 2019 and April 15, 2020","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Department of Family and Community Medicine, University of Toronto; Huck Institutes of the Life Sciences; Social Science Research Institute, Pennsylvania State University; Pennsylvania State University; University of Pennsylvania","keywords":"Medicine; Seasonal influenza; Coronavirus disease 2019 (COVID-19); Virology; Internal medicine; Disease","score_opus":0.15002216628941922,"score_gpt":0.4574985014361685,"score_spread":0.30747633514674927,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3107794479","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99039954,0.0046067433,0.000010421226,0.0033849247,0.00019633945,0.0004359037,0.0000138085325,0.000034503835,0.00091781834],"genre_scores_gemma":[0.95386374,0.0031684758,0.001309368,0.039681304,0.0018392821,0.0000088422585,0.0000042561387,0.00005881182,0.00006590637],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9945256,0.0005634483,0.003197179,0.00051137415,0.00062812056,0.00057426747],"domain_scores_gemma":[0.9953546,0.0019476525,0.0010987158,0.0002842793,0.0003796132,0.000935176],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0024207854,0.00032714446,0.002030964,0.00022410337,0.000071619004,0.000029955081,0.00021909368,0.0005708506,0.00013625645],"category_scores_gemma":[0.005703053,0.00025334212,0.00026983934,0.00033838715,0.000647945,0.0002427291,0.00042172772,0.0022601048,0.00006669378],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0049765897,0.00019929059,0.9762028,0.00023485586,0.0012851038,0.0020332488,0.00061538507,0.0000074497434,0.00015017853,0.000009114809,0.009441283,0.0048446995],"study_design_scores_gemma":[0.01296126,0.0035257086,0.8217021,0.00015903817,0.0003923204,0.00022735252,0.000058187452,0.00012161611,0.000016084892,0.00011303735,0.1605357,0.00018760435],"about_ca_topic_score_codex":0.000023795712,"about_ca_topic_score_gemma":0.000024517463,"teacher_disagreement_score":0.15450071,"about_ca_system_score_codex":0.000045592744,"about_ca_system_score_gemma":0.0003130536,"threshold_uncertainty_score":0.9999919},"labels":[],"label_agreement":null},{"id":"W3111140720","doi":"10.1016/j.jcv.2020.104715","title":"Prevalence, clinical characteristics, and outcomes of pediatric COVID-19: A systematic review and meta-analysis","year":2020,"lang":"en","type":"review","venue":"Journal of Clinical Virology","topic":"COVID-19 Clinical Research Studies","field":"Medicine","cited_by":157,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of Lethbridge; AccelLab (Canada)","funders":"","keywords":"Meta-analysis; Coronavirus disease 2019 (COVID-19); 2019-20 coronavirus outbreak; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Medicine; MEDLINE; Systematic review; Virology; Internal medicine; Disease; Biology","score_opus":0.38964079472995844,"score_gpt":0.6054265005304087,"score_spread":0.21578570580045026,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3111140720","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000026985492,0.9833058,0.00015914202,0.013677522,0.00018295938,0.002418056,0.00020875531,0.000012710774,0.000008039775],"genre_scores_gemma":[0.00015777309,0.9830499,0.00034729025,0.015483477,0.0005747473,0.00006388298,0.000007951436,0.000041889878,0.0002730311],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9719791,0.0075663533,0.018017555,0.000931157,0.001082911,0.00042295907],"domain_scores_gemma":[0.81912637,0.15950201,0.01668426,0.0011938704,0.00095354085,0.002539924],"candidate_categories":["metaresearch","metaepi_narrow","metaepi_broad","research_integrity"],"consensus_categories":["metaepi_broad"],"category_scores_codex":[0.02692916,0.00071443024,0.05303995,0.0006882731,0.000062600695,0.000021121405,0.0007001059,0.0010004126,0.00038719812],"category_scores_gemma":[0.58208776,0.00037917643,0.013486333,0.0009228146,0.0012349023,0.000072619514,0.00077424466,0.0034470204,0.000020934267],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010613246,0.00036582918,0.017422799,0.75002235,0.2278862,0.00036650847,0.00000800943,4.2002345e-8,1.940895e-9,0.000015986268,0.00046006605,0.0033460746],"study_design_scores_gemma":[0.00090911135,0.002328558,0.008877642,0.006114665,0.8886717,0.000077042634,0.0000020359414,0.000004180899,7.6509415e-10,0.000044212313,0.09275287,0.00021797347],"about_ca_topic_score_codex":0.000004081019,"about_ca_topic_score_gemma":0.0000015400794,"teacher_disagreement_score":0.7439077,"about_ca_system_score_codex":0.00006097717,"about_ca_system_score_gemma":0.0025688605,"threshold_uncertainty_score":0.999866},"labels":[],"label_agreement":null},{"id":"W3132718786","doi":"10.1016/j.jcv.2021.104764","title":"Extraction-free RT-LAMP to detect SARS-CoV-2 is less sensitive but highly specific compared to standard RT-PCR in 101 samples","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"SARS-CoV-2 detection and testing","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Research Manitoba; Canadian Women's Health Network","funders":"","keywords":"Loop-mediated isothermal amplification; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); False positive paradox; Medicine; Point-of-care testing; Coronavirus disease 2019 (COVID-19); 2019-20 coronavirus outbreak; Primer (cosmetics); Virology; Internal medicine; Biology; Pathology; Statistics; DNA; Chemistry; Mathematics","score_opus":0.20060236192671613,"score_gpt":0.43463000976159827,"score_spread":0.23402764783488214,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3132718786","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97666013,0.00016492572,0.007882116,0.0122081535,0.0019685929,0.00024942524,0.00003481723,0.000038303006,0.00079356227],"genre_scores_gemma":[0.95342046,0.00008003149,0.017929234,0.026937269,0.0015192323,0.000004403262,0.0000022057702,0.000041195206,0.00006598471],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99536586,0.00066259556,0.0023912552,0.00051813305,0.00057998195,0.00048217972],"domain_scores_gemma":[0.99406266,0.0034302915,0.00071981247,0.000528563,0.00092875963,0.0003299269],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0022036547,0.00027324766,0.0016171761,0.00045467293,0.00009009378,0.00004598069,0.00023349993,0.00037542364,0.00010105794],"category_scores_gemma":[0.01162322,0.00024813478,0.00046609368,0.00059328607,0.00014848336,0.000117248586,0.00015383451,0.0015159508,0.00011150757],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010297586,0.00042667688,0.013061413,0.000028804232,0.00028004544,0.0046911053,0.00040716433,0.000040296352,0.91793865,0.000043706106,0.01283905,0.039945506],"study_design_scores_gemma":[0.009139628,0.0033168767,0.14126179,0.00029497745,0.00016108456,0.0040615457,0.0007787537,0.00010374391,0.66885865,0.0008844471,0.17079812,0.00034040405],"about_ca_topic_score_codex":0.00009461766,"about_ca_topic_score_gemma":0.00084818667,"teacher_disagreement_score":0.24908,"about_ca_system_score_codex":0.00019137825,"about_ca_system_score_gemma":0.0005104618,"threshold_uncertainty_score":0.9999971},"labels":[],"label_agreement":null},{"id":"W3162965417","doi":"10.1016/j.jcv.2021.104908","title":"Benchmark of thirteen bioinformatic pipelines for metagenomic virus diagnostics using datasets from clinical samples","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Universität Zürich; Instituto de Salud Carlos III; European Bioinformatics Institute; Wellcome Trust","keywords":"Metagenomics; Computational biology; Pipeline transport; Biology; Virology; Gene; Genetics; Environmental science","score_opus":0.1297761930047785,"score_gpt":0.42021843384780844,"score_spread":0.29044224084302994,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3162965417","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98246866,0.00695959,0.007568924,0.00022340586,0.0013478604,0.00011286144,0.0012956029,7.5293826e-7,0.000022316102],"genre_scores_gemma":[0.89873517,0.017403737,0.07989702,0.0012825982,0.0023135662,0.0000025704671,0.00032941796,0.000024042518,0.000011878762],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9964382,0.00032570414,0.002641409,0.0002537507,0.00012083963,0.00022008925],"domain_scores_gemma":[0.9955307,0.0020849104,0.00147406,0.00039929486,0.00037111426,0.00013989088],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017117597,0.0001697374,0.0009974102,0.000040454168,0.00005489353,0.000012268787,0.00034314193,0.00034387832,0.000029538776],"category_scores_gemma":[0.006081678,0.00014019619,0.00063845306,0.00004948976,0.000277772,0.0000030654264,0.00027007717,0.00022789431,0.000002035284],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0034001875,0.001719518,0.27751902,0.0001380276,0.005679993,0.000079371384,0.00012431503,0.00082793646,0.64464194,0.00021903166,0.025837405,0.039813254],"study_design_scores_gemma":[0.011264225,0.0069773444,0.4937102,0.00010932962,0.002759169,0.00022231236,0.00034892993,0.001744935,0.099768,0.008682143,0.37355703,0.0008563806],"about_ca_topic_score_codex":0.000017139635,"about_ca_topic_score_gemma":0.00005697394,"teacher_disagreement_score":0.54487395,"about_ca_system_score_codex":0.0000048055745,"about_ca_system_score_gemma":0.00035774303,"threshold_uncertainty_score":0.7280776},"labels":[],"label_agreement":null},{"id":"W3169888404","doi":"10.1016/j.jcv.2021.104896","title":"One swab, two tests: Validation of dual SARS-CoV-2 testing on the Abbott ID NOW™","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"SARS-CoV-2 detection and testing","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Hospital; Health Sciences Centre; Toronto General Hospital; University of Toronto; Toronto East General Hospital; Sunnybrook Health Science Centre; North York General Hospital; Public Health Ontario; University of Alberta","funders":"","keywords":"Point-of-care testing; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Medicine; Coronavirus disease 2019 (COVID-19); Virology; Real-time polymerase chain reaction; 2019-20 coronavirus outbreak; Molecular diagnostics; Biology; Immunology; Internal medicine; Bioinformatics; Outbreak; Gene","score_opus":0.2685258049013061,"score_gpt":0.4545735782930871,"score_spread":0.18604777339178097,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3169888404","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98924637,0.00009978397,0.00027272722,0.0059994375,0.0008290536,0.00010215304,0.0000020955492,0.000022091688,0.0034262845],"genre_scores_gemma":[0.9835091,0.00002110824,0.0033338459,0.011657753,0.001428602,0.000001672292,0.0000013825567,0.000021797001,0.000024703957],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99657,0.0006023236,0.001944245,0.00021943783,0.00043332722,0.00023065835],"domain_scores_gemma":[0.98923117,0.008164902,0.0014494593,0.00031497792,0.0007724004,0.00006711368],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.003143296,0.00014072735,0.0008107211,0.00012465923,0.00007697244,0.000016035372,0.00013158206,0.00021287533,0.000056280143],"category_scores_gemma":[0.03476161,0.00010067519,0.00030744149,0.0003640604,0.00021284832,0.00007447691,0.00006411137,0.0012607228,0.0000570988],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006275066,0.00085534435,0.043957137,0.000024905847,0.00022106899,0.00033505296,0.00003751302,0.000021695927,0.94049853,0.00021902916,0.00065392157,0.012548273],"study_design_scores_gemma":[0.005277558,0.004386688,0.10542297,0.00030388666,0.00035711596,0.0023269665,0.00007046209,0.0007051605,0.8745827,0.0020624404,0.0043644328,0.00013958373],"about_ca_topic_score_codex":0.000009299356,"about_ca_topic_score_gemma":0.00001694059,"teacher_disagreement_score":0.065915816,"about_ca_system_score_codex":0.000031874948,"about_ca_system_score_gemma":0.00029359074,"threshold_uncertainty_score":0.973369},"labels":[],"label_agreement":null},{"id":"W3184432719","doi":"10.1016/j.jcv.2021.104914","title":"SARS-CoV-2 serology: Validation of high-throughput chemiluminescent immunoassay (CLIA) platforms and a field study in British Columbia","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"SARS-CoV-2 detection and testing","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Vancouver Coastal Health; Provincial Health Services Authority; Vancouver General Hospital; University of British Columbia; BC Centre for Disease Control; Surrey Memorial Hospital; Providence Health Care; BC Children's Hospital","funders":"Genome British Columbia","keywords":"Serology; Medicine; Seroprevalence; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Population; Immunoassay; Chemiluminescent immunoassay; Roche Diagnostics; Coronavirus disease 2019 (COVID-19); Positive predicative value; Antibody; Virology; Internal medicine; Immunology; Predictive value; Disease; Infectious disease (medical specialty)","score_opus":0.08814921670019649,"score_gpt":0.39912578472564025,"score_spread":0.31097656802544377,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3184432719","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99803495,0.00019943205,0.00007795795,0.0007143485,0.000703221,0.00017602791,0.0000015582123,0.0000102919785,0.00008220763],"genre_scores_gemma":[0.99569947,0.00011864622,0.000587245,0.0032843766,0.0002658064,0.0000029962412,0.0000017589613,0.000013581656,0.000026135225],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9972603,0.00018983032,0.0018815963,0.00024649422,0.00022293943,0.00019887861],"domain_scores_gemma":[0.99746376,0.0011510766,0.00081229163,0.00019587633,0.00032727263,0.000049732116],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018012759,0.00009447511,0.0010353157,0.00007475015,0.00003579242,0.000026270684,0.00008957722,0.0003354793,0.00004686052],"category_scores_gemma":[0.00524682,0.000113528586,0.00017103615,0.00021069199,0.00012801192,0.00010469764,0.00009014706,0.00087008235,0.0000022701527],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00060034305,0.0013985232,0.8471987,0.000037895712,0.00018211736,0.0010061463,0.00009383757,9.628757e-7,0.14000174,0.000001997681,0.00043228045,0.009045416],"study_design_scores_gemma":[0.011192019,0.004884545,0.82292,0.00015134836,0.00020931875,0.0032325338,0.00031747422,0.00007123444,0.15579644,0.00065564056,0.00045795873,0.0001114439],"about_ca_topic_score_codex":0.0014037909,"about_ca_topic_score_gemma":0.0075531127,"teacher_disagreement_score":0.024278684,"about_ca_system_score_codex":0.000026236576,"about_ca_system_score_gemma":0.00017892591,"threshold_uncertainty_score":0.6281313},"labels":[],"label_agreement":null},{"id":"W3186062866","doi":"10.1016/j.jcv.2021.104933","title":"Stability of SARS-CoV-2 IgG in multiple laboratory conditions and blood sample types","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"SARS-CoV-2 detection and testing","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; Alberta Hospital Edmonton; University of Alberta Hospital; University of Alberta","funders":"","keywords":"Antibody; Seroprevalence; Neutralization; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Biology; Immunology; Virology; Medicine; Coronavirus disease 2019 (COVID-19); Andrology; Internal medicine; Serology","score_opus":0.16153312061729036,"score_gpt":0.4294329991243935,"score_spread":0.2678998785071031,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3186062866","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982778,0.00038212645,0.00009092616,0.0007351589,0.0002926042,0.000056952882,0.000022059261,0.0000073123506,0.00013507681],"genre_scores_gemma":[0.9950953,0.000058711223,0.0022122904,0.0024535735,0.00016846413,9.61758e-7,0.0000015777812,0.000007550973,0.0000015381013],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99808455,0.00035477008,0.0011675084,0.00014556226,0.00012391782,0.00012370781],"domain_scores_gemma":[0.9952872,0.0036495612,0.00045360025,0.00015361287,0.00040233275,0.00005374177],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.001272691,0.00007383851,0.000627866,0.00009001756,0.000024205123,0.000004076898,0.00004537373,0.00017921522,0.00005519906],"category_scores_gemma":[0.01977316,0.00006342918,0.00012804432,0.00019373279,0.00025056963,0.000055743272,0.000034307755,0.00057326787,0.0000027168887],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002652487,0.0005563374,0.53382933,0.000027017993,0.00007599726,0.00013614555,0.000042913984,5.7081854e-7,0.46442813,0.000040021794,0.000050963594,0.00054734334],"study_design_scores_gemma":[0.0056947554,0.0012197867,0.5129697,0.000061151615,0.00017778236,0.00039469573,0.00010931508,0.00016826278,0.47512063,0.0009657829,0.0030515436,0.0000666468],"about_ca_topic_score_codex":0.000028015198,"about_ca_topic_score_gemma":0.00024816653,"teacher_disagreement_score":0.020859659,"about_ca_system_score_codex":0.000010926466,"about_ca_system_score_gemma":0.00029743707,"threshold_uncertainty_score":0.9884837},"labels":[],"label_agreement":null},{"id":"W3192804890","doi":"10.1016/j.jcv.2021.104938","title":"Evaluation of a high volume antigen test for detection of SARS-CoV-2","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"SARS-CoV-2 detection and testing","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Centre for Disease Control; University of British Columbia","funders":"","keywords":"Antigen; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Predictive value; Virology; Virus; Chemiluminescence; Detection limit; Medicine; Coronavirus disease 2019 (COVID-19); Diagnostic test; Predictive value of tests; Immunology; Chromatography; Chemistry; Internal medicine; Veterinary medicine; Disease","score_opus":0.23178037509654695,"score_gpt":0.474068735419531,"score_spread":0.24228836032298404,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3192804890","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99231446,0.00027270825,0.005418123,0.00064454344,0.000984975,0.00017368975,0.000004218103,0.000007775066,0.00017948005],"genre_scores_gemma":[0.9959234,0.000034058132,0.0025310186,0.00088135235,0.0005977,0.0000031997076,0.0000011628688,0.0000136817025,0.000014419195],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99707776,0.00038842045,0.001771146,0.00015586268,0.0004712336,0.00013557772],"domain_scores_gemma":[0.99381274,0.0017413403,0.0015084606,0.00018015312,0.0027176002,0.000039694773],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0053544487,0.00008840734,0.0007860437,0.00014921157,0.000027777573,0.0000035324433,0.00006836057,0.00025694078,0.000031471638],"category_scores_gemma":[0.03339162,0.000076170974,0.0004054082,0.00020636267,0.00012335449,0.00006224006,0.00002252481,0.00036223326,0.000004691811],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006460252,0.00047468016,0.025281949,0.0000373819,0.00018896171,0.000014994906,0.000022837425,0.000010516021,0.9076692,0.000008514416,0.00011374241,0.06553124],"study_design_scores_gemma":[0.0057026045,0.0040958645,0.16538183,0.00007211623,0.0007521235,0.0005265346,0.00002875862,0.006227038,0.8135377,0.0013774574,0.0022438185,0.00005413695],"about_ca_topic_score_codex":0.000017122366,"about_ca_topic_score_gemma":0.00004034682,"teacher_disagreement_score":0.14009988,"about_ca_system_score_codex":0.000035211502,"about_ca_system_score_gemma":0.0004997782,"threshold_uncertainty_score":0.9747505},"labels":[],"label_agreement":null},{"id":"W3204043031","doi":"10.1016/j.jcv.2021.104996","title":"Evaluation of the clinical and analytical performance of the Seegene allplex™ SARS-CoV-2 variants I assay for the detection of variants of concern (VOC) and variants of interests (VOI)","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia, Okanagan Campus; University of British Columbia; Kelowna General Hospital; BC Centre for Disease Control; Interior Health","funders":"British Columbia Centre for Disease Control","keywords":"Genotyping; Reproducibility; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); Assay sensitivity; Detection limit; Medicine; Repeatability; Genotype; Molecular biology; Gene; Biology; Virology; Chromatography; Internal medicine; Genetics; Chemistry; Pathology","score_opus":0.2659174034388553,"score_gpt":0.5038022854065729,"score_spread":0.23788488196771762,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3204043031","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99551374,0.0006811341,0.0012366177,0.0013335178,0.0006422071,0.00045245702,0.000020444353,0.0000013347396,0.000118540505],"genre_scores_gemma":[0.99774605,0.00028085848,0.00016690294,0.0015505754,0.00023023925,0.0000039255933,3.2926823e-7,0.000014151934,0.0000069805396],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9932442,0.002333923,0.0029195528,0.00026674938,0.0010155577,0.00022007541],"domain_scores_gemma":[0.9887177,0.0060692583,0.0024671876,0.0005647066,0.002132732,0.000048418755],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.017782016,0.0001514721,0.001262932,0.00009711385,0.000054943754,0.000005936673,0.00039318102,0.00040450948,0.000015183275],"category_scores_gemma":[0.022616321,0.0000794623,0.0005129829,0.00031584848,0.001558247,0.00008702622,0.00027083085,0.00080479204,3.7198015e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008315866,0.001256129,0.54073185,0.0003347933,0.0017716177,0.0000075669222,0.00022252937,0.00002251606,0.37942812,0.00024043454,0.00008746732,0.067581125],"study_design_scores_gemma":[0.0068818107,0.0031811614,0.8570929,0.00024855195,0.0015226905,0.00016135065,0.00007491957,0.03638873,0.09327074,0.00083210494,0.00028659485,0.000058400736],"about_ca_topic_score_codex":0.000033168384,"about_ca_topic_score_gemma":0.000111610025,"teacher_disagreement_score":0.3163611,"about_ca_system_score_codex":0.000025352767,"about_ca_system_score_gemma":0.0013137093,"threshold_uncertainty_score":0.9856166},"labels":[],"label_agreement":null},{"id":"W3204193056","doi":"10.1016/j.jcv.2021.104995","title":"Natural spring water gargle and direct RT-PCR for the diagnosis of COVID-19 (COVID-SPRING study)","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"SARS-CoV-2 detection and testing","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Intégré Universitaire de Santé et de Services Sociaux du Centre-Sud-de-l'Île-de-Montréal; Centre Hospitalier Universitaire Sainte-Justine; Centre hospitalier de l'Université Laval; Centre hospitalier universitaire de Québec; Institut National de Santé Publique du Québec; Université Laval; Université de Montréal; Centre Hospitalier de l’Université de Montréal; Centre intégré de santé et de services sociaux de Chaudière-Appalaches; Centre Intégré de Santé et Services Sociaux de Chaudière-Appalache","funders":"Ministère de la Santé","keywords":"Coronavirus disease 2019 (COVID-19); Spring (device); Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); 2019-20 coronavirus outbreak; Virology; Medicine; Pathology; Outbreak; Physics; Disease; Infectious disease (medical specialty)","score_opus":0.19662033993760958,"score_gpt":0.4650497563816814,"score_spread":0.2684294164440718,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3204193056","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99012,0.0013185149,0.0004989218,0.0067252903,0.0010292387,0.00021517416,0.0000010607365,0.000013849642,0.00007797237],"genre_scores_gemma":[0.9902018,0.00018520364,0.00067652436,0.008231145,0.0006476763,0.000009834204,1.6563038e-7,0.000015177394,0.00003247914],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99790823,0.00031370806,0.0011627165,0.00020605436,0.00019576534,0.00021353562],"domain_scores_gemma":[0.99132586,0.0076583875,0.0004371851,0.00019766753,0.00022734117,0.00015358455],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0028117693,0.000112991176,0.0007237069,0.000089295834,0.00011690733,0.000015144071,0.000111203495,0.0001288963,0.00005320828],"category_scores_gemma":[0.018552417,0.00006341165,0.00032771216,0.00009036127,0.0001585067,0.000054056272,0.00011002095,0.00062125496,0.000002105615],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015450699,0.00061459997,0.9548123,0.00010665669,0.0006092253,0.000419256,0.00038227308,0.000038247366,0.0301102,0.000022213595,0.00017305663,0.011166896],"study_design_scores_gemma":[0.018429475,0.0054535125,0.7312482,0.00010384355,0.0014889481,0.0012715559,0.0010433649,0.0016064713,0.10908843,0.00039756505,0.12961444,0.00025418148],"about_ca_topic_score_codex":0.00005444184,"about_ca_topic_score_gemma":0.00012776621,"teacher_disagreement_score":0.22356409,"about_ca_system_score_codex":0.000031401083,"about_ca_system_score_gemma":0.00018183986,"threshold_uncertainty_score":0.98971474},"labels":[],"label_agreement":null},{"id":"W3208208548","doi":"10.1016/j.jcv.2021.105025","title":"A metagenomics workflow for SARS-CoV-2 identification, co-pathogen detection, and overall diversity","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Respiratory viral infections research","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; Institute of Cancer Research; University of Calgary","funders":"Canadian Institutes of Health Research; Genome Canada","keywords":"Metagenomics; Biology; Computational biology; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Identification (biology); Microbiome; Virology; Coronavirus disease 2019 (COVID-19); Genetics; Medicine; Gene; Ecology; Internal medicine; Disease","score_opus":0.20543193029617432,"score_gpt":0.48445037136830726,"score_spread":0.2790184410721329,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3208208548","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98313546,0.00040695514,0.014168096,0.0014901385,0.00048542192,0.00018486279,0.000010052703,0.000007851348,0.00011114498],"genre_scores_gemma":[0.9941774,0.0005345191,0.0019401393,0.002397017,0.000669212,0.0000043553305,0.0000031904767,0.000013635838,0.00026055594],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.997904,0.00038448136,0.0011056893,0.00021762724,0.0002102303,0.00017797659],"domain_scores_gemma":[0.9975283,0.0007930787,0.0004715096,0.00022798215,0.00083552976,0.00014356483],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002681911,0.000089914065,0.00057860115,0.00014727794,0.0001868197,0.00002933639,0.00010485424,0.00023502491,0.000041326286],"category_scores_gemma":[0.004529135,0.0000782447,0.00032920655,0.00013050159,0.0002066809,0.00013310078,0.00011628858,0.000540086,0.00001709723],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0028308658,0.00061639247,0.17819603,0.00006318445,0.00075057073,0.00027230202,0.00006869249,0.000013299793,0.7823366,0.00018974021,0.003277181,0.031385157],"study_design_scores_gemma":[0.0070245746,0.003085104,0.7659767,0.000022147817,0.00062084955,0.0012144076,0.000036005873,0.00041606653,0.075579576,0.0051966677,0.14067215,0.0001557239],"about_ca_topic_score_codex":0.0000038953053,"about_ca_topic_score_gemma":0.000026367417,"teacher_disagreement_score":0.706757,"about_ca_system_score_codex":0.000048518687,"about_ca_system_score_gemma":0.00024850975,"threshold_uncertainty_score":0.5422124},"labels":[],"label_agreement":null},{"id":"W3210969903","doi":"10.1016/j.jcv.2021.105020","title":"Performance evaluation and optimized reporting workflow for HIV diagnostic screening and confirmatory tests in a low prevalence setting","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Centre for Disease Control","funders":"","keywords":"Medicine; False positive paradox; Human immunodeficiency virus (HIV); Confirmatory factor analysis; HIV diagnosis; Kappa; Turnaround time; False positive rate; Internal medicine; Immunology; Antiretroviral therapy; Viral load; Statistics; Computer science","score_opus":0.07104729336980793,"score_gpt":0.4097888890031288,"score_spread":0.3387415956333209,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3210969903","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.991132,0.0067542456,0.00044098744,0.0011765966,0.00021139042,0.00023946424,0.000006598387,0.0000038898515,0.000034823017],"genre_scores_gemma":[0.99301636,0.0020721667,0.004576488,0.00014395935,0.000069592046,0.00002998646,0.000012634478,0.000006666058,0.00007212584],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9970551,0.0008228656,0.0015928912,0.00020973025,0.00006179054,0.00025758403],"domain_scores_gemma":[0.9912947,0.0071002785,0.0011784045,0.000102909195,0.00026732875,0.000056416276],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.006483654,0.000092962204,0.00051233656,0.000075042146,0.00008874869,0.0000121845715,0.00006253731,0.00020093104,0.00008300108],"category_scores_gemma":[0.03132804,0.000075640135,0.00008638923,0.000047796722,0.00019867298,0.000112506656,0.00006291543,0.000480661,0.0000052787464],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009631691,0.00017955522,0.8404723,0.000088917055,0.00016387427,0.0001648602,0.0001153585,0.0002540007,0.0016919026,0.000003872319,0.00023812543,0.15566409],"study_design_scores_gemma":[0.010233576,0.0008049039,0.9830358,0.00040442075,0.00012919688,0.0010148428,0.000070308255,0.0030235434,0.00055060396,0.00008708098,0.00056176743,0.00008394257],"about_ca_topic_score_codex":0.000001187812,"about_ca_topic_score_gemma":0.0000047953263,"teacher_disagreement_score":0.15558015,"about_ca_system_score_codex":0.000015117329,"about_ca_system_score_gemma":0.00024336447,"threshold_uncertainty_score":0.9768315},"labels":[],"label_agreement":null},{"id":"W4200376880","doi":"10.1016/j.jcv.2021.105050","title":"A novel multiplex electrochemiluminescent immunoassay for detection and quantification of anti-SARS-CoV-2 IgG and anti-seasonal endemic human coronavirus IgG","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"SARS-CoV-2 detection and testing","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Centre for Disease Control; Université de Montréal; Vancouver Coastal Health; University of British Columbia","funders":"Michael Smith Health Research BC","keywords":"Multiplex; Serology; Immunoassay; Antibody; Virology; Antigen; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus; Kappa; Coronavirus disease 2019 (COVID-19); Medicine; Biology; Immunology; Bioinformatics; Pathology","score_opus":0.1684289133919568,"score_gpt":0.43655985336983444,"score_spread":0.2681309399778776,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200376880","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9870817,0.000844991,0.011035505,0.00038391296,0.0004102653,0.00019613691,0.000006782403,0.000016367409,0.000024315006],"genre_scores_gemma":[0.9960332,0.00021187092,0.002389596,0.00092279766,0.00039902207,0.000004900926,0.0000054722977,0.000023237923,0.000009916073],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99753463,0.0001431037,0.0015522325,0.00031875336,0.00021344134,0.00023783674],"domain_scores_gemma":[0.99685866,0.0011067269,0.0011556406,0.00018654038,0.0006178145,0.00007464284],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015071677,0.00016797731,0.000890194,0.00014008574,0.00010012759,0.00001530288,0.000075208445,0.00033203478,0.0000056933645],"category_scores_gemma":[0.0038983854,0.00015131485,0.00026363076,0.00015146367,0.00026149387,0.0000902657,0.000043900025,0.00063778204,9.190251e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009493057,0.000462045,0.044107836,0.00008200184,0.00017927666,0.000019199113,0.000024778787,6.4569025e-7,0.940116,0.00003797849,0.000019464966,0.014001488],"study_design_scores_gemma":[0.005594675,0.0011751363,0.23666734,0.00007465824,0.00023566617,0.0020487811,0.00003280866,0.001658331,0.7510261,0.00009604605,0.0012932838,0.00009715752],"about_ca_topic_score_codex":0.000019762798,"about_ca_topic_score_gemma":0.000038947706,"teacher_disagreement_score":0.19255951,"about_ca_system_score_codex":0.000031566073,"about_ca_system_score_gemma":0.00016426067,"threshold_uncertainty_score":0.61704403},"labels":[],"label_agreement":null},{"id":"W4206679137","doi":"10.1016/s1386-6532(07)70003-3","title":"The pathogens","year":2007,"lang":"en","type":"review","venue":"Journal of Clinical Virology","topic":"Respiratory viral infections research","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Joseph’s Healthcare Hamilton; McMaster University","funders":"","keywords":"Biology","score_opus":0.5192692511824526,"score_gpt":0.6490720071303616,"score_spread":0.12980275594790902,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206679137","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00015368845,0.99454886,0.0000849634,0.0003822547,0.001762513,0.0003372453,0.0000025643762,0.0000074306504,0.0027204584],"genre_scores_gemma":[0.000009711547,0.994194,0.00012345069,0.00061109057,0.003929032,0.000005086498,0.0000013725021,0.00003871317,0.0010875592],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9930713,0.0015729923,0.0042389445,0.00020389732,0.00051969633,0.00039314938],"domain_scores_gemma":[0.98850495,0.0080324495,0.002037954,0.0005450177,0.00048222832,0.00039741962],"candidate_categories":["metaresearch","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.012147779,0.00022727296,0.0031586098,0.00033784323,0.00012071092,0.000024338196,0.00043074272,0.0010298862,0.00016070712],"category_scores_gemma":[0.010434736,0.000105877385,0.002386508,0.00035406044,0.00062338664,0.00003801893,0.00011206892,0.0044528167,0.00036681138],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019591968,0.00016129213,0.00025436678,0.0006022235,0.0005273363,0.000804152,0.0000010702748,7.60976e-8,5.1790994e-7,0.00009424552,0.0052892077,0.9920696],"study_design_scores_gemma":[0.0005622638,0.0028837165,0.0006873974,0.0010398437,0.0009869733,0.0029839252,0.000002325319,6.131662e-7,1.8040238e-7,0.00008092508,0.99069613,0.00007570964],"about_ca_topic_score_codex":7.3073255e-7,"about_ca_topic_score_gemma":0.0000033801825,"teacher_disagreement_score":0.9919939,"about_ca_system_score_codex":0.000081172686,"about_ca_system_score_gemma":0.0015230991,"threshold_uncertainty_score":0.9979008},"labels":[],"label_agreement":null},{"id":"W4280538105","doi":"10.1016/j.jcv.2022.105184","title":"Clinical and phylogenetic influenza dynamics for the 2019-20 season in the global influenza hospital surveillance network (GIHSN) – Pilot study","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Nova Scotia Health Authority","funders":"","keywords":"Hemagglutinin (influenza); Medicine; Equine influenza; Influenza A virus; Epidemiology; Influenza-like illness; Phylogenetic tree; Pandemic; Internal medicine; Virology; Vaccination; Disease; Biology; Infectious disease (medical specialty); Coronavirus disease 2019 (COVID-19); Virus; Gene","score_opus":0.14565306470280992,"score_gpt":0.48514795061820476,"score_spread":0.33949488591539484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4280538105","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.983149,0.006131789,0.0000898517,0.007378642,0.0013383172,0.0017393236,0.000076429074,0.000010032216,0.000086630935],"genre_scores_gemma":[0.98292744,0.00075862027,0.00021301174,0.014149797,0.001814894,0.00008942503,0.000002679801,0.00002486239,0.000019267078],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9916122,0.003454841,0.0028797726,0.00043413063,0.0009201222,0.00069896306],"domain_scores_gemma":[0.98584443,0.011866792,0.0010826252,0.0005878976,0.0003936133,0.00022462918],"candidate_categories":["metaresearch","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.02042419,0.0002712656,0.0014222895,0.000071124465,0.00044201853,0.000039419647,0.00085608865,0.00014607991,0.000028369437],"category_scores_gemma":[0.008771007,0.00015466052,0.00040433323,0.00045955065,0.0010460707,0.0000678631,0.00067387347,0.00246497,0.0000051328725],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.012464753,0.0023790614,0.9718132,0.000014385015,0.0006628176,0.00015812037,0.00014160671,0.0014788501,0.0000012240832,0.00022484116,0.0049930126,0.0056681335],"study_design_scores_gemma":[0.011342565,0.043752626,0.9061303,0.000012279976,0.00021684368,0.00012961245,0.0005827403,0.0012823594,3.53244e-8,0.0010127941,0.035404243,0.00013357548],"about_ca_topic_score_codex":0.000051612682,"about_ca_topic_score_gemma":0.0009932583,"teacher_disagreement_score":0.065682866,"about_ca_system_score_codex":0.00012369845,"about_ca_system_score_gemma":0.00045063152,"threshold_uncertainty_score":0.9998364},"labels":[],"label_agreement":null},{"id":"W4295835897","doi":"10.1016/j.jcv.2022.105292","title":"Comparison of SARS-CoV-2 spike antibody quantitative titer reporting using the World Health Organization International Standard Units by four commercial assays","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada; University of Calgary; University of Alberta; Alberta Hospital Edmonton","funders":"Abbott Laboratories","keywords":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Titer; Medicine; Coronavirus disease 2019 (COVID-19); Virology; Antibody; Vaccination; Antibody titer; Serology; Immunology; Neutralizing antibody; 2019-20 coronavirus outbreak; Surrogate endpoint; Internal medicine; Infectious disease (medical specialty); Disease; Outbreak","score_opus":0.3888871914093785,"score_gpt":0.5897189810672885,"score_spread":0.20083178965791,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4295835897","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97818387,0.0001865624,0.008757037,0.01137035,0.0010399232,0.00018269071,0.000025497788,0.0000079168685,0.0002461367],"genre_scores_gemma":[0.9665657,0.000010599092,0.0011269582,0.03186772,0.0003797851,9.845398e-7,0.000012999714,0.000022832215,0.000012382146],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9941975,0.0011244005,0.0033301695,0.00018749511,0.00091737346,0.00024308248],"domain_scores_gemma":[0.9920968,0.0015920156,0.004925107,0.00019789235,0.0011435387,0.0000446523],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.007470481,0.00011887689,0.0010110145,0.00027119965,0.00021408936,0.000020232808,0.00032999102,0.00008668018,0.0000613175],"category_scores_gemma":[0.008717991,0.00008716798,0.00017793788,0.0007066798,0.0002449741,0.00009304661,0.00022399545,0.0014861583,0.000002190402],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025613501,0.00050182716,0.9025045,0.000025139972,0.0002864873,0.00010613171,0.0005289575,0.00003739304,0.07947072,0.0002942043,0.011329181,0.0023541169],"study_design_scores_gemma":[0.012301275,0.015761364,0.3701915,0.0002844829,0.00043844327,0.0015114857,0.0027341759,0.012946815,0.049703065,0.000762547,0.532962,0.0004028127],"about_ca_topic_score_codex":0.000076467535,"about_ca_topic_score_gemma":0.00007798389,"teacher_disagreement_score":0.532313,"about_ca_system_score_codex":0.0001823184,"about_ca_system_score_gemma":0.0012048952,"threshold_uncertainty_score":0.999632},"labels":[],"label_agreement":null},{"id":"W4312132086","doi":"10.1016/j.jcv.2022.105356","title":"Hunting for mpox (monkeypox) mimickers: Use of the Biofire meningitis/encephalitis panel on lesion swabs to support alternative viral diagnoses","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Saskatchewan Disease Control Laboratory; Nova Scotia Health Authority; Dalhousie University","funders":"","keywords":"Viral meningitis; Virology; Medicine; Viral encephalitis; Encephalitis; Meningitis; Virus; Bacterial meningitis; Pediatrics","score_opus":0.21232403862105512,"score_gpt":0.41465683479039833,"score_spread":0.20233279616934322,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4312132086","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930073,0.00018658832,0.00012605076,0.003619294,0.0023180693,0.00035161994,0.00028767268,0.000007915437,0.00009549497],"genre_scores_gemma":[0.99579453,0.00016596784,0.00026370984,0.0026660576,0.00023699779,0.000030125464,0.000015987955,0.000019677413,0.0008069626],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9961084,0.0014316976,0.0014676071,0.00029144465,0.00019340687,0.0005074185],"domain_scores_gemma":[0.9933773,0.0049258834,0.0010957627,0.00028836576,0.00021895181,0.0000937159],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022375342,0.00017099248,0.00075220905,0.00018849483,0.00032262277,0.000014504861,0.00078203366,0.00024435337,0.000512367],"category_scores_gemma":[0.0052665374,0.00011902214,0.0006016127,0.00013870085,0.0004578855,0.00013119688,0.0004987507,0.0012545144,0.000034012388],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.029704299,0.0032454056,0.19615532,0.000065691944,0.0022185626,0.0004525239,0.001878276,0.0011735423,0.43051276,0.0034850647,0.111267775,0.21984078],"study_design_scores_gemma":[0.010536276,0.037163425,0.21473087,0.00014518142,0.0002489791,0.0007726128,0.0007170668,0.000049688333,0.09978893,0.0023993608,0.6329771,0.0004704608],"about_ca_topic_score_codex":0.00020405446,"about_ca_topic_score_gemma":0.000047179437,"teacher_disagreement_score":0.5217094,"about_ca_system_score_codex":0.000051919047,"about_ca_system_score_gemma":0.00026495528,"threshold_uncertainty_score":0.63049173},"labels":[],"label_agreement":null},{"id":"W4313837589","doi":"10.1016/j.jcv.2023.105380","title":"Prevalence and incidence of HEV among men using HIV pre-exposure prophylaxis: A sub-study of the ANRS IPERGAY trial","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Hepatitis Viruses Studies and Epidemiology","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Men who have sex with men; Medicine; Interquartile range; Seroprevalence; Incidence (geometry); Transmission (telecommunications); Sexual transmission; Hepatitis E virus; Pre-exposure prophylaxis; Virology; Demography; Immunology; Internal medicine; Human immunodeficiency virus (HIV); Serology; Syphilis; Biology; Antibody","score_opus":0.11091456781880661,"score_gpt":0.42760495856967545,"score_spread":0.31669039075086886,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313837589","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99773836,0.00033106364,0.000021004364,0.0006049455,0.000642768,0.00060092425,0.0000044024223,0.0000059324675,0.000050604223],"genre_scores_gemma":[0.99620885,0.0029758697,0.00010050129,0.00019598947,0.0004536598,0.0000053950603,1.5936061e-7,0.000011480428,0.00004807407],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99544877,0.001300358,0.0024740647,0.00021817071,0.00031722186,0.00024141416],"domain_scores_gemma":[0.99528754,0.0022500092,0.001781235,0.00029882547,0.0002581009,0.00012427718],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.004493593,0.00013097262,0.0013825581,0.00010096345,0.00006677436,0.000002420645,0.00022893297,0.00025388005,0.00001687054],"category_scores_gemma":[0.011360098,0.00007557817,0.00027620673,0.00020100652,0.00070316,0.0000667939,0.00025954185,0.0006935932,0.0000011581565],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0114662275,0.00048927794,0.98521465,0.00011173831,0.00026216634,0.000058032976,0.0004807955,0.00010344861,0.0007701874,0.000010166203,0.00030373488,0.0007295499],"study_design_scores_gemma":[0.014912878,0.017782263,0.96561724,0.00016510868,0.00034223907,0.000066535446,0.00021862413,0.00063023716,0.00004448493,0.00011237811,0.000052291754,0.000055746936],"about_ca_topic_score_codex":0.00019500735,"about_ca_topic_score_gemma":0.00015635439,"teacher_disagreement_score":0.019597463,"about_ca_system_score_codex":0.000018862469,"about_ca_system_score_gemma":0.00017344035,"threshold_uncertainty_score":0.9969676},"labels":[],"label_agreement":null},{"id":"W4362672393","doi":"10.1016/j.jcv.2023.105445","title":"Human pegivirus viremia in HCV/HIV co-infected patients: Direct acting antivirals exert anti-pegivirus effects","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Hepatitis C virus research","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; University of Alberta","funders":"University Hospital Foundation; U.S. Department of Veterans Affairs","keywords":"GB virus C; Virology; Hepatitis C virus; Medicine; Ledipasvir; Viremia; Virus; Hepatitis C; Flaviviridae; Ribavirin","score_opus":0.088426365745613,"score_gpt":0.48205617820526947,"score_spread":0.39362981245965645,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4362672393","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98749155,0.000084027495,0.00001911706,0.0009434156,0.00090930786,0.0005485789,0.00001739326,0.00009061368,0.009895989],"genre_scores_gemma":[0.99667317,0.00078470603,0.00009500536,0.0011200384,0.00091877615,0.00001258051,0.000026935593,0.00007898269,0.00028983256],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.992497,0.002130662,0.0029250763,0.00052050187,0.00095956854,0.0009671735],"domain_scores_gemma":[0.99254686,0.004888009,0.0011780394,0.00049586757,0.0003646296,0.0005266158],"candidate_categories":["metaresearch","metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.005749168,0.00034307194,0.0023030175,0.0010605436,0.00014036823,0.000040204806,0.000418679,0.0006851385,0.00021825962],"category_scores_gemma":[0.01659942,0.0002849961,0.00061335164,0.000972099,0.00040660283,0.00031942493,0.00020488803,0.00267454,0.00087652676],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00081488915,0.0009309199,0.9112314,0.00011737793,0.00022081213,0.0024761325,0.00009781299,0.000012633854,0.013516673,0.000008875911,0.010434165,0.060138285],"study_design_scores_gemma":[0.010150132,0.0043660617,0.95900035,0.0003628472,0.00011549655,0.00002201376,0.000017486935,0.00024076548,0.0017661605,0.00007457168,0.023642085,0.00024202088],"about_ca_topic_score_codex":0.000058640275,"about_ca_topic_score_gemma":0.000084015635,"teacher_disagreement_score":0.059896264,"about_ca_system_score_codex":0.00014795091,"about_ca_system_score_gemma":0.00036467306,"threshold_uncertainty_score":0.99996024},"labels":[],"label_agreement":null},{"id":"W4379230689","doi":"10.1016/j.jcv.2023.105498","title":"Performance of rapid antigen tests in identifying Omicron BA.4 and BA.5 infections in South Africa","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"SARS-CoV-2 detection and testing","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"European and Developing Countries Clinical Trials Partnership; Medical Research Council; Direktion für Entwicklung und Zusammenarbeit; Department of Science and Innovation, South Africa","keywords":"Antigen; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Medicine; Coronavirus disease 2019 (COVID-19); Virology; Internal medicine; Immunology","score_opus":0.1564603978230498,"score_gpt":0.42324276083300094,"score_spread":0.2667823630099512,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4379230689","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986403,0.00020324273,0.00001758038,0.00028578044,0.00042184978,0.00007673596,6.3568433e-7,0.0000131882825,0.000340689],"genre_scores_gemma":[0.9989655,0.00037666367,0.00022211228,0.00024131888,0.0001688389,0.0000012401458,2.7109925e-7,0.000009544457,0.000014496365],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998165,0.00015941203,0.0012437283,0.00013040885,0.00011766054,0.00018376781],"domain_scores_gemma":[0.9982715,0.0010154267,0.00048258432,0.00009721045,0.000076745404,0.000056512617],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021721495,0.00007705502,0.0005529987,0.00054483407,0.000027616647,0.000005046586,0.000057778496,0.0001694384,0.000019998562],"category_scores_gemma":[0.003090078,0.000065672626,0.00010729669,0.00047951544,0.00012807347,0.00008582789,0.00004754789,0.0006911994,0.000014955999],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028988902,0.0001388851,0.94273955,0.000037251426,0.000025144434,0.000079424135,0.00045632324,0.00002104197,0.047731258,0.000002132173,0.000031944888,0.008447184],"study_design_scores_gemma":[0.0030443622,0.0015224185,0.99008393,0.00016379132,0.000027856435,0.00025857557,0.00013448823,0.001777049,0.0022103877,0.00006993602,0.0006555227,0.000051693365],"about_ca_topic_score_codex":0.00000783545,"about_ca_topic_score_gemma":0.000031529078,"teacher_disagreement_score":0.047344398,"about_ca_system_score_codex":0.000017488013,"about_ca_system_score_gemma":0.000093076924,"threshold_uncertainty_score":0.36993352},"labels":[],"label_agreement":null},{"id":"W4379619136","doi":"10.1016/j.jcv.2023.105517","title":"In vitro fitness of SARS-CoV-2 variants as assessed by competition experiments followed by ddRT-PCR and whole genome sequencing","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier de l'Université Laval; Institut National de Santé Publique du Québec; Université Laval; Centre hospitalier universitaire de Québec","funders":"Canadian Institutes of Health Research","keywords":"Biology; Respiratory tract; Gene; Genome; Respiratory system; Genetics; Differential display; Molecular biology; Gene expression; Anatomy","score_opus":0.13591395494349892,"score_gpt":0.4698899940710691,"score_spread":0.3339760391275701,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4379619136","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99633414,0.0004258007,0.00017983418,0.002127832,0.00035969692,0.00019094093,0.000024237816,0.0000121117155,0.00034543255],"genre_scores_gemma":[0.9805499,0.00008086165,0.00014564427,0.018943004,0.00019848593,0.0000070752217,0.0000116482615,0.00002400754,0.00003940942],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99683815,0.00047387846,0.001532944,0.00028472423,0.0004949052,0.0003754153],"domain_scores_gemma":[0.99790263,0.0010510434,0.0005680681,0.00021590329,0.0001792906,0.00008305048],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025109819,0.0001593863,0.0010746368,0.00030223056,0.000039172446,0.000016486116,0.00021787893,0.00034552903,0.00001972454],"category_scores_gemma":[0.0013717004,0.00013598178,0.00020412043,0.00034881145,0.0002577085,0.0001762125,0.000107622254,0.00076932734,0.00004186493],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027393438,0.00043605923,0.012813214,0.000049230744,0.00013254509,0.00060247956,0.00012347693,6.4972085e-7,0.98079866,0.00001891664,0.0019567125,0.0003287012],"study_design_scores_gemma":[0.019183513,0.004523555,0.043626513,0.0001612953,0.00013946499,0.00038749186,0.0003619942,0.0007901843,0.8839736,0.001142334,0.045448203,0.00026184382],"about_ca_topic_score_codex":0.00009118874,"about_ca_topic_score_gemma":0.000006367647,"teacher_disagreement_score":0.09682506,"about_ca_system_score_codex":0.00008918375,"about_ca_system_score_gemma":0.00040109927,"threshold_uncertainty_score":0.5545176},"labels":[],"label_agreement":null},{"id":"W4384699779","doi":"10.1016/j.jcv.2023.105549","title":"Epidemiology of cytomegalovirus antiviral resistance testing for solid organ and bone marrow transplant patients from 2011 – 2019","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; St. Paul's Hospital; Providence Health Care; University of British Columbia","funders":"","keywords":"Medicine; Viremia; Internal medicine; Viral load; Genotyping; Cytomegalovirus; Transplantation; Epidemiology; Hematopoietic stem cell transplantation; Bone marrow transplant; Immunology; Gastroenterology; Genotype; Viral disease; Virus; Bone marrow transplantation; Herpesviridae; Biology","score_opus":0.12758387411038677,"score_gpt":0.4277532464362112,"score_spread":0.3001693723258244,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4384699779","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950008,0.0010634854,0.00015906365,0.0026031667,0.0004443106,0.00029686402,0.0002471629,0.000015739659,0.000169413],"genre_scores_gemma":[0.99396205,0.001273571,0.003003884,0.0006807838,0.0006403679,0.0000043453697,0.000034496774,0.000032581065,0.00036793418],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99589163,0.00047996556,0.0025230714,0.00033307052,0.00027038498,0.0005018583],"domain_scores_gemma":[0.98800814,0.009800166,0.0011630647,0.00024553854,0.00048075075,0.00030232884],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0045038634,0.00017922193,0.0018895331,0.0003000669,0.00007832509,0.0000032680105,0.00018693665,0.00041508029,0.00007848756],"category_scores_gemma":[0.007448974,0.00013659919,0.0003515711,0.0002066629,0.00046879068,0.00009477719,0.00007054874,0.0007916109,0.000045259883],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009571327,0.00033351334,0.96675366,0.00010403306,0.00026391886,0.00014411547,0.00007261183,0.0000020785944,0.0069904984,0.00006511641,0.006966685,0.008732432],"study_design_scores_gemma":[0.0071366653,0.0038203879,0.97940767,0.00014514597,0.00019492993,0.000030767165,0.000015046077,0.0002476957,0.00048511557,0.0020386688,0.00636059,0.00011732774],"about_ca_topic_score_codex":0.000077161596,"about_ca_topic_score_gemma":0.00009885302,"teacher_disagreement_score":0.01265399,"about_ca_system_score_codex":0.000021748303,"about_ca_system_score_gemma":0.00021558009,"threshold_uncertainty_score":0.89176553},"labels":[],"label_agreement":null},{"id":"W4399037323","doi":"10.1016/j.jcv.2024.105697","title":"Melting curve analysis reveals false-positive norovirus detection in a molecular syndromic panel","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; St. Paul's Hospital; University of British Columbia Hospital","funders":"","keywords":"Norovirus; Melting curve analysis; Medicine; Virology; Biology; Genetics; Real-time polymerase chain reaction; Virus","score_opus":0.08005608882631275,"score_gpt":0.44492823953875626,"score_spread":0.3648721507124435,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399037323","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97964936,0.0014242374,0.013569766,0.004721174,0.0003850872,0.00011940205,0.000006505647,0.00001298919,0.00011150288],"genre_scores_gemma":[0.99612695,0.0006721409,0.001034739,0.0017371812,0.00034673317,0.000004176942,0.000004472542,0.000015457967,0.000058126152],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.995525,0.0015601354,0.0019717023,0.00029543127,0.00023454112,0.00041316624],"domain_scores_gemma":[0.99810684,0.0009126961,0.0003715276,0.000163748,0.00014932083,0.00029586474],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005225499,0.00013449446,0.0014078477,0.00072277035,0.000022365133,0.000015803225,0.00013326883,0.0002990689,0.00008500561],"category_scores_gemma":[0.006100235,0.000104390456,0.00086954026,0.000524022,0.00017552482,0.00009319161,0.000058937934,0.0015348364,0.000038457056],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0059214137,0.00065459847,0.72144777,0.00016976692,0.006163279,0.029085504,0.00012626537,0.00069184805,0.14521274,0.00014125429,0.0005177873,0.08986781],"study_design_scores_gemma":[0.0020627265,0.0056989724,0.97924966,0.00024674856,0.0010376592,0.0027474074,0.00003888847,0.0066598565,0.00041410845,0.0013131094,0.00042933377,0.000101562095],"about_ca_topic_score_codex":0.00008378032,"about_ca_topic_score_gemma":0.00013597835,"teacher_disagreement_score":0.2578019,"about_ca_system_score_codex":0.000089858,"about_ca_system_score_gemma":0.00011239945,"threshold_uncertainty_score":0.7302992},"labels":[],"label_agreement":null},{"id":"W4400110340","doi":"10.1016/j.jcv.2024.105711","title":"A systematic review and meta-analysis of the risk of hepatitis B virus (HBV) resistance in people treated with entecavir or tenofovir","year":2024,"lang":"en","type":"review","venue":"Journal of Clinical Virology","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University College London Hospitals Biomedical Research Centre; UCLH Biomedical Research Centre; Sierra Oncology; University of Oxford; Wellcome Trust; Francis Crick Institute; Agency for Science, Technology and Research; GlaxoSmithKline","keywords":"Entecavir; Tenofovir; Hepatitis B virus; Virology; Medicine; Drug resistance; Chronic hepatitis; Hepatitis a virus; Hepatitis B; Virus; Internal medicine; Biology; Lamivudine; Microbiology; Human immunodeficiency virus (HIV)","score_opus":0.13329671923136197,"score_gpt":0.4438052031397689,"score_spread":0.3105084839084069,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400110340","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0018069003,0.99555725,0.000007205392,0.0005045164,0.00006322057,0.0016775131,0.00032500195,0.000004952534,0.000053445474],"genre_scores_gemma":[0.0015311117,0.99715054,0.00019906006,0.00040949835,0.00003731593,0.000092703005,0.000003968369,0.000036733032,0.00053907325],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.98686814,0.0039722137,0.007926632,0.0004004308,0.0005947295,0.00023782975],"domain_scores_gemma":[0.9850413,0.005144839,0.0084053995,0.00082772336,0.0004476073,0.00013312914],"candidate_categories":["metaresearch","metaepi_broad"],"consensus_categories":[],"category_scores_codex":[0.0054190387,0.00048590457,0.027903868,0.0006170275,0.000030868996,0.0000070525007,0.00039358746,0.00040672268,0.00013196128],"category_scores_gemma":[0.009999468,0.00018213343,0.005354505,0.0020729362,0.00047386534,0.00004371761,0.00016027992,0.0015099809,0.000005289923],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026375402,0.0002950136,0.011137487,0.611618,0.37540066,0.0002876498,0.00006031362,4.127324e-7,1.6707777e-7,0.000014713544,0.00033712303,0.00058470445],"study_design_scores_gemma":[0.00041452833,0.0009964551,0.007057304,0.089668564,0.892,0.00017575968,0.000003626915,0.0000020153113,1.8296916e-7,0.000013181412,0.009541815,0.00012652339],"about_ca_topic_score_codex":0.00085495337,"about_ca_topic_score_gemma":0.050840445,"teacher_disagreement_score":0.5219494,"about_ca_system_score_codex":0.00007834588,"about_ca_system_score_gemma":0.0005635533,"threshold_uncertainty_score":0.9983397},"labels":[],"label_agreement":null},{"id":"W4400933744","doi":"10.1016/j.jcv.2024.105715","title":"Characterising the molecular epidemiology of human parechovirus in young infants in the UK and Canada","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Viral Infections and Immunology Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of British Columbia; BC Centre for Disease Control; B.C. Women's Hospital & Health Centre; BC Children's Hospital","funders":"National Institute for Health and Care Research; European Society for Paediatric Infectious Diseases","keywords":"Epidemiology; Molecular epidemiology; Medicine; Virology; Pediatrics; Biology; Genetics; Pathology; Gene; Genotype","score_opus":0.11387447459197034,"score_gpt":0.48619400386402833,"score_spread":0.372319529272058,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400933744","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9842487,0.0035981885,0.000016528653,0.011476648,0.0003409443,0.000095734125,0.0000013553822,0.0000010889624,0.00022080708],"genre_scores_gemma":[0.99691564,0.0011935907,0.000016652199,0.0017377519,0.000113567825,0.0000025049687,7.5774733e-7,0.0000047203366,0.000014822846],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9970739,0.0013123661,0.0012196335,0.0001060492,0.00009829926,0.00018977174],"domain_scores_gemma":[0.99693656,0.002599363,0.00022055116,0.00015279555,0.00005161536,0.00003908731],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.006159082,0.00006587671,0.0005687399,0.00014160061,0.000031107127,0.000003874753,0.00013836591,0.00016804674,0.000034668366],"category_scores_gemma":[0.0028790291,0.00003280161,0.0000960825,0.00014654474,0.0003582714,0.000034739813,0.00004625111,0.001551805,8.3575844e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023042492,0.000058405916,0.991892,0.000014889029,0.00007985998,0.00040439886,0.00009234226,0.0000031059699,0.0027933456,0.00046223987,0.00012278747,0.003846245],"study_design_scores_gemma":[0.00063965336,0.0010714297,0.99545926,0.00007879578,0.00003238399,0.0006988145,0.00010558237,0.00007978986,0.000037731577,0.00085569994,0.0009147592,0.00002608741],"about_ca_topic_score_codex":0.04825029,"about_ca_topic_score_gemma":0.11051978,"teacher_disagreement_score":0.062269486,"about_ca_system_score_codex":0.000028519804,"about_ca_system_score_gemma":0.00031255258,"threshold_uncertainty_score":0.9580875},"labels":[],"label_agreement":null},{"id":"W4402979893","doi":"10.1016/j.jcv.2024.105732","title":"Investigation of suspected false positive norovirus results on a syndromic gastrointestinal multiplex molecular panel","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; Vancouver General Hospital; BC Centre for Disease Control; University of British Columbia; Okanagan University College; University of British Columbia, Okanagan Campus; Kelowna General Hospital; Interior Health","funders":"Genome British Columbia","keywords":"Norovirus; Multiplex; Medicine; Virology; Biology; Bioinformatics; Virus","score_opus":0.12829692258641798,"score_gpt":0.41934668052226703,"score_spread":0.2910497579358491,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402979893","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98710746,0.00022824848,0.0011794503,0.010765574,0.00030326782,0.00017074322,0.000044646167,0.000017575527,0.00018300938],"genre_scores_gemma":[0.9936491,0.00018762785,0.004162567,0.0015117239,0.00039069747,0.0000021294006,0.000022609964,0.000019478946,0.000054014745],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99575514,0.0010762732,0.0021891051,0.000292975,0.00032055855,0.00036592718],"domain_scores_gemma":[0.996965,0.0014310542,0.000599876,0.00020326748,0.00036111535,0.00043968306],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0026116567,0.00015975031,0.001024003,0.00030479569,0.000020291624,0.000009196691,0.00015958009,0.00017822346,0.000046707366],"category_scores_gemma":[0.014576745,0.00011925864,0.00047538662,0.00016180392,0.00054404687,0.000069702466,0.00005581211,0.0013715052,0.000043800792],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.06986761,0.00082587503,0.17689285,0.0002805501,0.0010703492,0.030288443,0.00015024045,0.00028215488,0.69526845,0.0009206283,0.009030883,0.015121991],"study_design_scores_gemma":[0.007220287,0.03937703,0.9308209,0.0014710635,0.00019394653,0.013110527,0.000033842105,0.0032634048,0.0023102958,0.0017514122,0.00033808616,0.000109249704],"about_ca_topic_score_codex":0.000040459254,"about_ca_topic_score_gemma":0.000012324335,"teacher_disagreement_score":0.753928,"about_ca_system_score_codex":0.00005642502,"about_ca_system_score_gemma":0.00030446038,"threshold_uncertainty_score":0.99372387},"labels":[],"label_agreement":null},{"id":"W4405439166","doi":"10.1016/j.jcv.2024.105759","title":"The molecular epidemiology of respiratory syncytial virus in Ontario, Canada from 2022–2024 using a custom whole genome sequencing assay and analytics package","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Respiratory viral infections research","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Sunnybrook Health Science Centre; St. Michael's Hospital; Queen's University; Kingston Health Sciences Centre","funders":"Public Health Agency of Canada","keywords":"Virology; Analytics; Genome; Computational biology; Biology; Whole genome sequencing; R package; DNA sequencing; Genetics; Data science; Computer science; Gene","score_opus":0.16763560580642792,"score_gpt":0.4480586937287396,"score_spread":0.28042308792231163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405439166","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98859197,0.008005037,0.00093190686,0.0011721489,0.0009515344,0.00014647556,0.000018865114,0.00000412617,0.00017792749],"genre_scores_gemma":[0.9971884,0.00022563519,0.00033926795,0.0016832949,0.00041689258,0.0000020785772,0.0000018370614,0.000023323437,0.00011930212],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99440104,0.0020691124,0.002480968,0.0003032846,0.00036021578,0.00038535596],"domain_scores_gemma":[0.99258465,0.0060441657,0.00053959776,0.00034189003,0.00021019296,0.0002795343],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.008574062,0.00016342173,0.0011505595,0.00030807737,0.000067790796,0.000014440123,0.00020181084,0.00036080906,0.00016513244],"category_scores_gemma":[0.0071785916,0.00011107798,0.0002543868,0.00031108985,0.0005281535,0.000087977336,0.00012937393,0.0026884577,0.0000042129795],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013907908,0.00012786262,0.7851691,0.000076171986,0.0010869665,0.007518071,0.000113536,0.0020656334,0.19648829,0.00046090348,0.0011306407,0.0043719877],"study_design_scores_gemma":[0.0025378403,0.0033113423,0.87470716,0.00032122762,0.0005889815,0.0005411923,0.00018492999,0.009583874,0.0009876566,0.0029104145,0.104067564,0.0002578214],"about_ca_topic_score_codex":0.3757567,"about_ca_topic_score_gemma":0.77753174,"teacher_disagreement_score":0.401775,"about_ca_system_score_codex":0.0008401065,"about_ca_system_score_gemma":0.006679742,"threshold_uncertainty_score":0.9996124},"labels":[],"label_agreement":null},{"id":"W4406320372","doi":"10.1016/j.jcv.2025.105762","title":"Evaluation of a next generation sequencing assay for Hepatitis B antiviral drug resistance on the oxford nanopore system","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; Providence Health Care","funders":"","keywords":"Nanopore sequencing; Virology; Drug resistance; Computational biology; DNA sequencing; Drug; Medicine; Biology; Genetics; Pharmacology; Gene","score_opus":0.22398503040080517,"score_gpt":0.4296317410256482,"score_spread":0.20564671062484305,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406320372","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.981839,0.0009319983,0.0017326409,0.0103801275,0.0012369334,0.0005546553,0.00000878453,0.000007698426,0.0033081372],"genre_scores_gemma":[0.99581295,0.0006313552,0.0011013058,0.0014384777,0.00060287403,0.000025936342,0.0000028098573,0.000009921566,0.0003743761],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99601793,0.001403781,0.0016666178,0.000164593,0.0005889376,0.00015813613],"domain_scores_gemma":[0.9946111,0.0025632693,0.0011112291,0.00022753973,0.0014466693,0.000040199946],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.01332978,0.00011111526,0.00076531194,0.00011836051,0.000110810644,0.00000993942,0.00012163202,0.0001517346,0.00001700284],"category_scores_gemma":[0.010937296,0.000070570786,0.00030706316,0.00013743654,0.0001622617,0.00007371953,0.000026503469,0.00035796568,0.000002433549],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0063157873,0.0012773994,0.56328,0.0015845371,0.0049199504,0.00015911095,0.0018174265,0.0003582185,0.055044506,0.052134562,0.1559337,0.15717483],"study_design_scores_gemma":[0.030000048,0.010301115,0.56004924,0.007977315,0.011324273,0.00014034583,0.0012708284,0.27144954,0.02193583,0.012245268,0.072571,0.0007352046],"about_ca_topic_score_codex":0.000034033044,"about_ca_topic_score_gemma":0.0012743146,"teacher_disagreement_score":0.2710913,"about_ca_system_score_codex":0.0002305513,"about_ca_system_score_gemma":0.0005309533,"threshold_uncertainty_score":0.997394},"labels":[],"label_agreement":null},{"id":"W4408318774","doi":"10.1016/j.jcv.2025.105779","title":"Human papillomavirus incidence and transmission by vaccination status among heterosexual couples","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McGill University Health Centre; Université de Montréal; St. Michael's Hospital; Centre Hospitalier de l’Université de Montréal; McGill University","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Merck Canada; Faculty of Medicine, McGill University; Canada Research Chairs; Roche","keywords":"Human papillomavirus; Incidence (geometry); Transmission (telecommunications); Virology; Vaccination; Demography; Medicine; Sociology; Telecommunications; Computer science; Internal medicine; Physics; Optics","score_opus":0.051217604705402896,"score_gpt":0.481143126000947,"score_spread":0.4299255212955441,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408318774","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99186265,0.0030245737,0.00086085196,0.002511522,0.00016745983,0.00011500676,0.0000025902511,0.0000068796626,0.0014484634],"genre_scores_gemma":[0.9951065,0.0028363392,0.000118803306,0.0012981943,0.00018093044,0.0000017875424,0.000002994522,0.0000065829945,0.00044783656],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981435,0.0001997932,0.0009882987,0.00016806956,0.00028388118,0.00021646892],"domain_scores_gemma":[0.998554,0.00056626165,0.00023544698,0.00010826962,0.00023664586,0.0002993621],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012455493,0.00008778203,0.00057014433,0.00011825947,0.00007240847,0.000015713964,0.00009669721,0.00022918893,0.00078384945],"category_scores_gemma":[0.00066453527,0.000063401174,0.00012466982,0.000107403735,0.00018701228,0.000092827555,0.000045177687,0.0007999027,0.0000020703117],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020178133,0.00033686263,0.574318,0.00009200325,0.000095542935,0.00006284147,0.00004278962,0.0000022363536,0.0077001457,0.000104192855,0.00459159,0.410636],"study_design_scores_gemma":[0.0041737943,0.0026379612,0.9746969,0.000025707133,0.00006997359,0.000021086133,0.000025932954,0.00019213528,0.00033625046,0.00096229854,0.016809396,0.000048599315],"about_ca_topic_score_codex":0.000038014943,"about_ca_topic_score_gemma":0.000035390458,"teacher_disagreement_score":0.4105874,"about_ca_system_score_codex":0.000035851113,"about_ca_system_score_gemma":0.0001578342,"threshold_uncertainty_score":0.8582602},"labels":[],"label_agreement":null},{"id":"W4410796275","doi":"10.1016/j.jcv.2025.105807","title":"Clinical and sociodemographic correlates of emergent or evolving HIV drug resistance in low viral load specimens in British Columbia, Canada","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of British Columbia; AIDS Vancouver","funders":"Canadian Institutes of Health Research","keywords":"HIV drug resistance; Viral load; Human immunodeficiency virus (HIV); Drug resistance; Resistance (ecology); Medicine; Virology; Demography; Gerontology; Antiretroviral therapy; Biology; Sociology; Genetics; Ecology","score_opus":0.01484598745115701,"score_gpt":0.3178696106527493,"score_spread":0.3030236232015923,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410796275","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9873304,0.0028042605,0.000009080589,0.008552219,0.0007544281,0.0001988269,0.0000061424507,0.0000034199252,0.00034121747],"genre_scores_gemma":[0.98194325,0.0037892568,0.0011419503,0.0006930037,0.00010756618,0.0000032502128,0.0000025976774,0.00001002763,0.012309101],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99551296,0.0004221293,0.0031775953,0.00028066372,0.00031743533,0.00028921655],"domain_scores_gemma":[0.997082,0.0017105639,0.00066982576,0.00015207977,0.00019710875,0.00018844967],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025363413,0.00012026839,0.0013982587,0.00012898308,0.000037087673,0.000013396139,0.00013393746,0.0002485685,0.00022377538],"category_scores_gemma":[0.0021603033,0.0001293272,0.0002273211,0.00028787757,0.00037113228,0.000058040037,0.00006954143,0.00096235663,0.0000012977536],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010473889,0.00074800465,0.96138024,0.000069978174,0.00026034415,0.0016634255,0.00007549034,0.0000020507853,0.0000044454864,0.000012994314,0.032957856,0.0017777844],"study_design_scores_gemma":[0.008512573,0.00020248136,0.98335713,0.00087817817,0.00014208413,0.000043018234,0.00013618308,0.00008516734,0.0000021993678,0.000646865,0.0059002917,0.000093821924],"about_ca_topic_score_codex":0.018716162,"about_ca_topic_score_gemma":0.9578813,"teacher_disagreement_score":0.93916506,"about_ca_system_score_codex":0.0001449777,"about_ca_system_score_gemma":0.0025623012,"threshold_uncertainty_score":0.9878183},"labels":[],"label_agreement":null},{"id":"W4411635180","doi":"10.1016/j.jcv.2025.105830","title":"Laboratory evaluation of antigen rapid diagnostic tests to detect Ebola and Sudan viruses","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Foreign, Commonwealth and Development Office; Bundesministerium für Wirtschaftliche Zusammenarbeit und Entwicklung; Government of Canada","keywords":"Virology; Ebola virus; Antigen; Ebolavirus; Diagnostic test; Medicine; Immunology; Virus; Veterinary medicine","score_opus":0.1268209650338628,"score_gpt":0.5236796749182977,"score_spread":0.3968587098844349,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411635180","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952721,0.0014174121,0.00030381873,0.0018613255,0.00036423464,0.00021580268,0.000004658394,0.000004286991,0.0005563381],"genre_scores_gemma":[0.9966044,0.0010467687,0.00036169685,0.0017111466,0.0002397822,0.0000040090003,3.5516553e-7,0.0000059442896,0.000025907333],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978431,0.0006267149,0.0009532107,0.0001260446,0.00031259737,0.0001383411],"domain_scores_gemma":[0.99550873,0.002934584,0.00025962715,0.00014375483,0.0009823594,0.00017097259],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.005024314,0.00007277556,0.000536696,0.00030832677,0.000036790072,0.0000074431246,0.000071460934,0.00016227987,0.00011678616],"category_scores_gemma":[0.022298856,0.000053561875,0.00012311006,0.00028870025,0.00017160134,0.000053429114,0.00005437946,0.00042071467,0.000009179396],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013355669,0.0003931595,0.59300935,0.000058341102,0.00032611523,0.000051065384,0.000035920697,0.000045808243,0.057447158,0.00007262177,0.0028410538,0.34438387],"study_design_scores_gemma":[0.0024301338,0.0035428528,0.9743755,0.000106398125,0.00026609193,0.000038669765,0.000016945474,0.0001396112,0.0060308627,0.0004861689,0.012525864,0.000040931303],"about_ca_topic_score_codex":0.00001506115,"about_ca_topic_score_gemma":0.000045648045,"teacher_disagreement_score":0.38136613,"about_ca_system_score_codex":0.000024206662,"about_ca_system_score_gemma":0.000562444,"threshold_uncertainty_score":0.98593676},"labels":[],"label_agreement":null},{"id":"W4413275132","doi":"10.1016/j.jcv.2025.105856","title":"Impact on hospital length of stay and antimicrobial usage in children diagnosed with viral meningitis by rapid multiplexed PCR assay","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Health Libraries Association","keywords":"Viral meningitis; Antimicrobial; Meningitis; Medicine; Virology; Pediatrics; Bacterial meningitis; Microbiology; Biology","score_opus":0.010848277517788895,"score_gpt":0.34422072763202244,"score_spread":0.33337245011423355,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413275132","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99742025,0.0000938181,0.00005117823,0.0017915776,0.00024765282,0.00021737897,0.000028302278,0.000006474089,0.00014335498],"genre_scores_gemma":[0.9984884,0.00036665556,0.00009961265,0.0008363684,0.00016464875,0.0000018073598,0.000004014922,0.000010942977,0.00002754861],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99803656,0.00037853653,0.0010471783,0.00018237904,0.00014358397,0.00021176778],"domain_scores_gemma":[0.99800545,0.0010855464,0.00053082476,0.000143248,0.00008849036,0.0001464483],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009743918,0.00015326745,0.0009138445,0.00025454108,0.000036597306,0.000007894498,0.0000886345,0.00025923466,0.000036241898],"category_scores_gemma":[0.0009674408,0.00009598206,0.0002379629,0.00013958626,0.0003313015,0.0000742968,0.000030057645,0.00085905276,0.0000013958753],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019396408,0.0014673655,0.9647061,0.000008872565,0.0005132678,0.00011829696,0.000043037035,0.000026206537,0.024435665,0.000007820061,0.0013761271,0.005357557],"study_design_scores_gemma":[0.010716618,0.014232183,0.9728874,0.000118497665,0.00017054773,0.00015144123,0.000011805438,0.000028700713,0.0011002925,0.000013595588,0.00048727516,0.00008165393],"about_ca_topic_score_codex":0.000026911857,"about_ca_topic_score_gemma":0.000010760753,"teacher_disagreement_score":0.023335373,"about_ca_system_score_codex":0.00003087098,"about_ca_system_score_gemma":0.00019943039,"threshold_uncertainty_score":0.39140347},"labels":[],"label_agreement":null},{"id":"W4414802100","doi":"10.1016/j.jcv.2025.105877","title":"Some assembly required: Comparison of bioinformatic pipelines for analysis of viral metagenomic sequencing from nosocomial respiratory virus outbreaks","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Respiratory viral infections research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Kingston Health Sciences Centre; Queen's University; Sunnybrook Hospital; Health Sciences Centre; North York General Hospital; Sunnybrook Health Science Centre","funders":"Canadian Institutes of Health Research; McLaughlin Centre, University of Toronto","keywords":"Metagenomics; Outbreak; Genome; Whole genome sequencing; Pipeline (software); Virus; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19)","score_opus":0.2246347264701526,"score_gpt":0.5253015807063429,"score_spread":0.30066685423619033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414802100","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99048215,0.0013559376,0.0063815215,0.00043892913,0.00069865934,0.00037974797,0.000066217704,0.000010487396,0.00018634784],"genre_scores_gemma":[0.9951482,0.00011457791,0.0027166803,0.0012811293,0.00064792216,0.000009107946,0.000010700705,0.00001631757,0.000055385677],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.992569,0.0006927751,0.005733913,0.00024218514,0.00045350633,0.00030857557],"domain_scores_gemma":[0.9917519,0.0038087636,0.0028544823,0.0005185344,0.0008737292,0.0001926037],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0045601893,0.00020579353,0.0031203022,0.0016855623,0.00006795481,0.000015251741,0.00039183447,0.0004879915,0.00006359301],"category_scores_gemma":[0.0062155263,0.00016116472,0.0015747925,0.000742684,0.00049302273,0.00028047356,0.00012324206,0.0008636349,0.000007325076],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011751328,0.0014520182,0.27905652,0.00035517738,0.014734429,0.000033794604,0.00023774659,0.0033257012,0.6641369,0.0008451196,0.0026929106,0.021378372],"study_design_scores_gemma":[0.02352556,0.020362612,0.6298084,0.0004645205,0.024333013,0.000016687545,0.00069440296,0.060818087,0.21808606,0.0035017813,0.017845789,0.00054306106],"about_ca_topic_score_codex":0.00012224934,"about_ca_topic_score_gemma":0.00009177973,"teacher_disagreement_score":0.44605082,"about_ca_system_score_codex":0.0001451106,"about_ca_system_score_gemma":0.0011081578,"threshold_uncertainty_score":0.74410146},"labels":[],"label_agreement":null},{"id":"W4415013875","doi":"10.1016/j.jcv.2025.105879","title":"Utility of cytomegalovirus (CMV) qualitative polymerase chain reaction from gastrointestinal biopsies in diagnosis of CMV gastrointestinal disease: A 10-year retrospective study","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; St. Paul's Hospital; Providence Health Care; University of British Columbia","funders":"Takeda Pharmaceutical Company","keywords":"Cytomegalovirus; Polymerase chain reaction; Betaherpesvirinae; Retrospective cohort study; Real-time polymerase chain reaction; Viral disease; Disease","score_opus":0.07975635244355209,"score_gpt":0.45311013411736617,"score_spread":0.37335378167381406,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415013875","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99635655,0.00036264656,0.00020306693,0.0018424474,0.00014769025,0.00052010437,0.0001730668,0.000010933356,0.00038350967],"genre_scores_gemma":[0.99809337,0.00013392663,0.0012059938,0.00013198188,0.00024301471,0.000016504415,0.000008902648,0.000019621011,0.0001466584],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9932334,0.0018626293,0.0032420347,0.00048443495,0.0007538885,0.00042364156],"domain_scores_gemma":[0.992079,0.004431703,0.00161842,0.00047609612,0.0009943738,0.0004003864],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.004719551,0.0002737054,0.0020197923,0.00079668785,0.000048712333,0.000010565901,0.00031060405,0.00013662038,0.00068709056],"category_scores_gemma":[0.01784961,0.00022711251,0.00059781666,0.00073035836,0.001275622,0.00015478737,0.00017329816,0.0015489296,0.000011695181],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.042040844,0.006596621,0.9430234,0.00008295936,0.00029873545,0.00058005773,0.0007355932,0.0000034728876,0.004458822,0.00009697583,0.0005057828,0.001576777],"study_design_scores_gemma":[0.008144906,0.008873504,0.97522604,0.0007721503,0.00029436374,0.00006935312,0.004498526,0.00016531713,0.0005050364,0.0012121493,0.00012857324,0.00011006689],"about_ca_topic_score_codex":0.0014350436,"about_ca_topic_score_gemma":0.00057935633,"teacher_disagreement_score":0.033895936,"about_ca_system_score_codex":0.00012607084,"about_ca_system_score_gemma":0.0010323796,"threshold_uncertainty_score":0.99042344},"labels":[],"label_agreement":null},{"id":"W4416032219","doi":"10.1016/j.jcv.2025.105886","title":"Anti-cluster A and anti-p24 antibodies in people with multidrug-resistant HIV: Preliminary observations from the PRESTIGIO registry","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Uniformed Services University of the Health Sciences","keywords":"Antibody; Viremia; Humoral immunity; Antibody response; Immunopathology","score_opus":0.03959050465839636,"score_gpt":0.34411566647337033,"score_spread":0.30452516181497397,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416032219","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9778127,0.0046611875,0.00013496888,0.016668502,0.00027313785,0.00021746554,0.000072192175,0.00000731781,0.00015251987],"genre_scores_gemma":[0.99646485,0.0015525374,0.00043266715,0.0007176074,0.000056463068,0.000008422164,0.000034316403,0.00000741145,0.00072569685],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977199,0.0007997107,0.00089522224,0.00024021856,0.000057522022,0.00028745385],"domain_scores_gemma":[0.9952308,0.003949775,0.0003719934,0.00029396996,0.000109923596,0.000043541637],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00077428744,0.00014796488,0.0006810376,0.00009486381,0.00014511768,0.000019358939,0.00029346292,0.0002748438,0.000043127908],"category_scores_gemma":[0.0011813807,0.000081863865,0.00011965588,0.00013813823,0.00070121913,0.00009416915,0.00015544388,0.00085524033,0.000025922369],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0031450249,0.0005398611,0.9814817,0.000013363616,0.00056152896,0.0001285538,0.00022838167,0.000035801328,0.003656396,0.00011590547,0.009248838,0.0008446671],"study_design_scores_gemma":[0.0050624367,0.00086701603,0.9795078,0.0001287305,0.00013816138,0.000074187315,0.00020797265,0.00002654862,0.0001508467,0.00022149809,0.013543485,0.000071300914],"about_ca_topic_score_codex":0.00024755613,"about_ca_topic_score_gemma":0.00079153886,"teacher_disagreement_score":0.018652169,"about_ca_system_score_codex":0.00001730442,"about_ca_system_score_gemma":0.00028611766,"threshold_uncertainty_score":0.37156412},"labels":[],"label_agreement":null},{"id":"W4416958735","doi":"10.1016/j.jcv.2025.105904","title":"Optimized respiratory virus influenza A whole genome sequencing strategies for improving even read coverage of segments","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Virology","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"Public Health Agency of Canada","keywords":"Whole genome sequencing; Genome; Amplicon; Nanopore sequencing; Influenza A virus; Sequence assembly; Primer (cosmetics); DNA sequencing","score_opus":0.201251130970976,"score_gpt":0.4958069701482154,"score_spread":0.2945558391772394,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416958735","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9842798,0.0027871416,0.009343576,0.0006325852,0.00046543378,0.00065936433,0.00005345341,0.00001605457,0.0017625758],"genre_scores_gemma":[0.95566416,0.00094023166,0.020276306,0.021027025,0.0012564186,0.00006400555,0.0000060157236,0.00006695911,0.0006988693],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9956952,0.00043734143,0.0027587668,0.00026519742,0.00041162595,0.00043190536],"domain_scores_gemma":[0.994881,0.0022720005,0.0013598292,0.00034235424,0.00096700474,0.00017781612],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0046044737,0.0001998801,0.0015780103,0.00038751672,0.000102925675,0.000021902773,0.0002976978,0.00034156587,0.000046842815],"category_scores_gemma":[0.008048619,0.00015556597,0.000558044,0.0002014072,0.00042437614,0.00023649864,0.00019403134,0.00095894944,0.000006095634],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.05863154,0.0011588119,0.027346054,0.0017704483,0.0043514855,0.00047113362,0.0008435601,0.006361312,0.8588728,0.00096749084,0.0020162305,0.037209164],"study_design_scores_gemma":[0.14497022,0.046508454,0.39877802,0.0019033116,0.003923905,0.00020071346,0.0035319352,0.0032365345,0.013173116,0.01940322,0.36315846,0.001212116],"about_ca_topic_score_codex":0.000029058352,"about_ca_topic_score_gemma":0.000009581958,"teacher_disagreement_score":0.84569967,"about_ca_system_score_codex":0.00018024167,"about_ca_system_score_gemma":0.0023633929,"threshold_uncertainty_score":0.9635531},"labels":[],"label_agreement":null}]}