{"meta":{"query_hash":"2a2dff9f5f3d","filters":{"venue":"Journal of Developmental Biology"},"cohort_total":26,"direct_labels_cover":0,"predictions_cover":26,"exported":26,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/2a2dff9f5f3d","api":"https://metacan.xera.ac/api/v1/cohort?venue=Journal+of+Developmental+Biology"},"results":[{"id":"W2075641599","doi":"10.3390/jdb3020025","title":"Retinoic Acid and the Development of the Endoderm","year":2015,"lang":"en","type":"article","venue":"Journal of Developmental Biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children’s Health Research Institute; Western University","funders":"","keywords":"Endoderm; Retinoic acid; Biology; Cell biology; Lineage (genetic); Embryogenesis; Vertebrate; Embryonic stem cell; Embryo; Genetics; Gene","score_opus":0.020620020305166315,"score_gpt":0.24980467190130773,"score_spread":0.2291846515961414,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2075641599","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99687654,0.0013361117,0.00017877526,0.00033628184,0.00029172807,0.0000662716,0.0000017042477,7.687878e-7,0.00091182545],"genre_scores_gemma":[0.996575,0.00009913262,0.002853949,0.00025853852,0.00006962286,0.0000023343066,0.0000032182936,0.0000042878637,0.00013393171],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992175,0.0000993111,0.00039165688,0.00008908072,0.00009056832,0.00011185407],"domain_scores_gemma":[0.99943876,0.000015394475,0.0002692833,0.00008754695,0.00014163084,0.00004736247],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054441084,0.00008686096,0.00015840027,0.00002711378,0.000053891657,0.0000062925315,0.00028033782,0.00007682222,0.0000058841943],"category_scores_gemma":[0.00014003181,0.000042085965,0.000061347084,0.00004704801,0.0002478644,0.0000032651171,0.00020985256,0.00009187153,0.000002389033],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006409699,0.000036403264,0.02997712,0.0000071371924,0.00020819441,0.000001491454,0.0015843911,0.0000015321012,0.95527786,0.00012868861,0.0019219666,0.010214225],"study_design_scores_gemma":[0.0015972907,0.00017930556,0.0077629546,0.000021015605,0.000014239211,0.000299372,0.00094552414,0.0000014425427,0.96906555,0.00030391166,0.019725088,0.000084306295],"about_ca_topic_score_codex":0.0000019999118,"about_ca_topic_score_gemma":0.000017544924,"teacher_disagreement_score":0.022214167,"about_ca_system_score_codex":0.000018239569,"about_ca_system_score_gemma":0.00038057272,"threshold_uncertainty_score":0.17162159},"labels":[],"label_agreement":null},{"id":"W2272029985","doi":"10.3390/jdb4010003","title":"Notochord Cells in Intervertebral Disc Development and Degeneration","year":2016,"lang":"en","type":"article","venue":"Journal of Developmental Biology","topic":"Spine and Intervertebral Disc Pathology","field":"Medicine","cited_by":115,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Canadian Institutes of Health Research; Ontario Ministry of Research and Innovation; Natural Sciences and Engineering Research Council of Canada; U.S. Public Health Service; Canadian Arthritis Network; Arthritis Society","keywords":"Notochord; Degeneration (medical); Intervertebral disc; Degenerative disc disease; Neuroscience; Anatomy; Medicine; Biology; Pathology; Cell biology; Lumbar; Embryogenesis; Embryo","score_opus":0.022769881606769196,"score_gpt":0.280265914580859,"score_spread":0.2574960329740898,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2272029985","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99673307,0.0001605952,0.001231439,0.0010037854,0.00027296794,0.00010569398,0.0000019508182,0.0000048356073,0.00048568187],"genre_scores_gemma":[0.9795113,0.000057867346,0.01951393,0.0005574874,0.00006431055,0.0000056505046,0.000004014449,0.000007713282,0.0002777187],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989593,0.000047366706,0.00059896125,0.00013779874,0.000072337476,0.0001842214],"domain_scores_gemma":[0.99963623,0.000011804394,0.00015557768,0.00004480988,0.00005821269,0.00009334914],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022486219,0.0001173853,0.00031121587,0.000243663,0.000021313002,0.0000052826504,0.00007089695,0.00010033233,0.00019916892],"category_scores_gemma":[0.00006448694,0.000065883716,0.00005170682,0.000073008625,0.000073965595,0.00012226998,0.000065532244,0.00010950741,0.000033460463],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008728762,0.00009605615,0.091861255,0.0000127787325,0.00004299811,0.00008654779,0.00032392732,3.7534782e-8,0.83398485,0.00014497053,0.00063537474,0.07272393],"study_design_scores_gemma":[0.0028106645,0.00076784973,0.36530244,0.0002454199,0.000012340897,0.001166148,0.0002022545,0.0000025696468,0.6258508,0.000110356494,0.003399565,0.00012961109],"about_ca_topic_score_codex":0.0000038491166,"about_ca_topic_score_gemma":0.000039304923,"teacher_disagreement_score":0.2734412,"about_ca_system_score_codex":0.00016010833,"about_ca_system_score_gemma":0.0001665435,"threshold_uncertainty_score":0.268666},"labels":[],"label_agreement":null},{"id":"W2309801891","doi":"10.3390/jdb4020013","title":"Hoxa5: A Key Player in Development and Disease","year":2016,"lang":"en","type":"review","venue":"Journal of Developmental Biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":73,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Hôtel-Dieu de Québec","funders":"Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada","keywords":"Key (lock); Geography; Biology; Ecology","score_opus":0.02939425932627313,"score_gpt":0.3181312628729802,"score_spread":0.28873700354670706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2309801891","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.010175709,0.98899883,0.0001386991,0.000028356537,0.0002903636,0.00016608075,0.000016609254,0.0000014767359,0.00018387518],"genre_scores_gemma":[0.0013509528,0.9950155,0.0031527488,0.000036007194,0.00018255034,0.000013526567,0.00007496179,0.000024833804,0.0001489014],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983918,0.00014380437,0.0008706625,0.0002713911,0.00009229071,0.0002300415],"domain_scores_gemma":[0.99907184,0.000041366326,0.0005184432,0.00009627813,0.00005880714,0.0002132694],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042177088,0.00027493126,0.00068889034,0.00023593682,0.000036126614,0.000013069988,0.00019586021,0.00031047867,0.000016694585],"category_scores_gemma":[0.00018039641,0.00018369342,0.00013258746,0.000077755154,0.00006684721,0.0000039822185,0.00017206772,0.00015875764,0.00001156443],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004708771,0.00004687765,0.001405088,0.0005116661,0.00015637802,0.000030860574,0.000042772546,9.699623e-8,0.0015998037,0.00003299584,0.0001037614,0.9960226],"study_design_scores_gemma":[0.00037384298,0.00009760768,0.00034508595,0.0016767386,0.00003615152,0.00004587224,0.000008027784,3.8849727e-8,0.0008261778,0.000104579914,0.9962286,0.00025732644],"about_ca_topic_score_codex":6.0368734e-7,"about_ca_topic_score_gemma":0.0000069240423,"teacher_disagreement_score":0.9961248,"about_ca_system_score_codex":0.00009313324,"about_ca_system_score_gemma":0.0012327865,"threshold_uncertainty_score":0.74908006},"labels":[],"label_agreement":null},{"id":"W2311415470","doi":"10.3390/jdb4020014","title":"Hox Genes in Cardiovascular Development and Diseases","year":2016,"lang":"en","type":"review","venue":"Journal of Developmental Biology","topic":"Congenital heart defects research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Clinical Research Institute","funders":"Agence Nationale de la Recherche","keywords":"Hox gene; Homeobox; Heart development; Biology; Transcription factor; Gene; Genetics; TBX1; Bioinformatics; Promoter; Embryonic stem cell; Gene expression","score_opus":0.030931155239422924,"score_gpt":0.3273405336393363,"score_spread":0.2964093783999134,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2311415470","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0061789434,0.9931681,0.000021420423,0.000008842135,0.00019649442,0.00026193098,0.000025484107,0.0000023881205,0.00013637294],"genre_scores_gemma":[0.00072389847,0.9976914,0.0010447514,0.000012914573,0.00022214346,0.000027029917,0.000053963613,0.000033611315,0.00019029682],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980046,0.0002851277,0.000803043,0.0003651341,0.00018186342,0.00036023746],"domain_scores_gemma":[0.9992726,0.000056998295,0.00022842851,0.00017147299,0.00009309046,0.0001774273],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048423855,0.00032738573,0.0012718478,0.00035982928,0.000048462774,0.000017775586,0.0003039256,0.00036219077,0.000021113685],"category_scores_gemma":[0.00012411695,0.00021803472,0.0004266417,0.00013680497,0.00013512658,0.0000057236743,0.00040976238,0.000214886,0.000025463596],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024307335,0.000032833774,0.0007281555,0.0008464945,0.0008352133,0.00008633956,0.000012008262,2.6530843e-8,0.00036384191,0.0000052055093,0.00007650109,0.9969891],"study_design_scores_gemma":[0.00041164507,0.00013887706,0.00019687232,0.0014787393,0.000084344545,0.0011188328,0.000014746125,2.4835494e-8,0.00041360944,0.000013537228,0.9958424,0.00028634595],"about_ca_topic_score_codex":0.0000018869084,"about_ca_topic_score_gemma":0.000011947264,"teacher_disagreement_score":0.99670273,"about_ca_system_score_codex":0.00015128347,"about_ca_system_score_gemma":0.0013869603,"threshold_uncertainty_score":0.8891198},"labels":[],"label_agreement":null},{"id":"W2473461569","doi":"10.3390/jdb4020021","title":"Signalling by Transforming Growth Factor Beta Isoforms in Wound Healing and Tissue Regeneration","year":2016,"lang":"en","type":"review","venue":"Journal of Developmental Biology","topic":"Wound Healing and Treatments","field":"Medicine","cited_by":187,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Regeneration (biology); Wound healing; Gene isoform; Cell biology; Transforming growth factor; Blastema; Signalling; Transforming growth factor beta; Biology; Growth factor; Signal transduction; Receptor; Immunology; Biochemistry; Gene","score_opus":0.04751228619430884,"score_gpt":0.3484758739250576,"score_spread":0.3009635877307487,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2473461569","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.009581498,0.9890655,0.00035320123,0.0002361399,0.0002493984,0.00038258787,0.00003871024,0.0000069577736,0.000085985695],"genre_scores_gemma":[0.0051694904,0.9921795,0.0021204695,0.00005306381,0.0001876138,0.000008625656,0.000116430565,0.000027650402,0.00013714575],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.998169,0.00007818248,0.001125193,0.00021470846,0.00013041156,0.0002825198],"domain_scores_gemma":[0.9991174,0.00013753193,0.00048795855,0.000044963443,0.00006250638,0.00014966617],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003415858,0.00029243302,0.001424025,0.00035593568,0.00007870839,0.000016829672,0.00007448096,0.00037182448,0.00003391805],"category_scores_gemma":[0.000031235566,0.00016879043,0.00012950305,0.00011577173,0.000047379013,0.00009806195,0.000016943188,0.000380573,0.000009039366],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044952212,0.00007257994,0.0010229014,0.0021276255,0.00033170028,0.000072875606,0.00021235694,1.4953832e-8,0.0012576217,0.000030723928,0.000051813993,0.9947748],"study_design_scores_gemma":[0.0031585756,0.0012145581,0.00009843913,0.030381233,0.0004720548,0.0043721404,0.00007820405,5.082815e-7,0.00365258,0.00023505479,0.9558393,0.0004973728],"about_ca_topic_score_codex":0.00002021849,"about_ca_topic_score_gemma":0.000011555227,"teacher_disagreement_score":0.9942775,"about_ca_system_score_codex":0.0005472696,"about_ca_system_score_gemma":0.0005400656,"threshold_uncertainty_score":0.6883074},"labels":[],"label_agreement":null},{"id":"W2790005115","doi":"10.3390/jdb6010005","title":"Flying the RNA Nest: Drosophila Reveals Novel Insights into the Transcriptome Dynamics of Early Development","year":2018,"lang":"en","type":"review","venue":"Journal of Developmental Biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Montréal; Montreal Clinical Research Institute","funders":"","keywords":"Maternal to zygotic transition; Biology; Chromatin; Transcriptome; Evolutionary biology; Drosophila melanogaster; Embryo; Evolutionary developmental biology; Genetics; Computational biology; Cell biology; Embryogenesis; Zygote; Gene; Gene expression","score_opus":0.023580976352517206,"score_gpt":0.27723337385876384,"score_spread":0.25365239750624663,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2790005115","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16519268,0.8322568,0.0007982575,0.000098709,0.0009379542,0.0004721836,0.000027554392,0.0000035824812,0.00021226318],"genre_scores_gemma":[0.050159026,0.94213146,0.0066264127,0.00014229637,0.00043462816,0.000026361777,0.00022373408,0.00006879137,0.00018732109],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9970865,0.00019998557,0.001809742,0.00034193447,0.00021924147,0.00034256993],"domain_scores_gemma":[0.9974243,0.0000827302,0.0017685646,0.000353139,0.00027441487,0.000096871925],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008191041,0.000490272,0.0011392167,0.0001611404,0.0003460224,0.00003606539,0.0014115183,0.0005544769,0.000008304568],"category_scores_gemma":[0.0000777825,0.00026271775,0.00051712926,0.00023869005,0.00040682202,0.000007141907,0.00035280487,0.0004614806,0.000008565134],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002069298,0.0004964296,0.00061991106,0.004436981,0.0057132486,0.000028074672,0.008498757,0.000006449954,0.098324716,0.0018672338,0.0007808198,0.87902045],"study_design_scores_gemma":[0.0005576581,0.000556086,0.00031622936,0.0018980758,0.00035250833,0.0007107978,0.00035691814,0.000009754306,0.0010418225,0.00044646283,0.99315596,0.00059774285],"about_ca_topic_score_codex":0.000008830845,"about_ca_topic_score_gemma":0.00006140514,"teacher_disagreement_score":0.99237514,"about_ca_system_score_codex":0.0002225824,"about_ca_system_score_gemma":0.0012628887,"threshold_uncertainty_score":0.9999825},"labels":[],"label_agreement":null},{"id":"W2883887580","doi":"10.3390/jdb6030020","title":"A Potential Role for MMPs during the Formation of Non-Neurogenic Placodes","year":2018,"lang":"en","type":"review","venue":"Journal of Developmental Biology","topic":"Protease and Inhibitor Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Saint Vincent University; Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Morphogen; Extracellular matrix; Matrix metalloproteinase; Cell biology; Morphogenesis; Biology; Anatomy; Neuroscience; Genetics; Gene","score_opus":0.012855539771196882,"score_gpt":0.2751711588253816,"score_spread":0.26231561905418477,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2883887580","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.024200866,0.9729037,0.001558687,0.00001052765,0.00057475985,0.0005974214,0.000092896255,0.0000021996882,0.000058917332],"genre_scores_gemma":[0.01504125,0.9813321,0.0024607903,0.00003677771,0.0008432746,0.00004283738,0.00014240082,0.000028433282,0.000072099574],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986945,0.00009247133,0.00077998056,0.00015533107,0.0000826099,0.00019515543],"domain_scores_gemma":[0.9986748,0.000017212673,0.001004744,0.00011759278,0.00014058627,0.000045058398],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033386357,0.00020630904,0.0005513982,0.00009707284,0.00008968504,0.00000968958,0.00036063214,0.00029856802,0.000007577617],"category_scores_gemma":[0.00006113625,0.00012705103,0.00047558238,0.00006002401,0.000070426046,0.000007268351,0.00014480422,0.00013507156,0.000004553381],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030482223,0.00009001166,0.00000532984,0.00255851,0.0008009837,0.0000058211012,0.000069946094,7.146043e-7,0.8934846,0.000017471459,0.0012457444,0.101416074],"study_design_scores_gemma":[0.0004978363,0.00071654917,0.000002263504,0.0006754124,0.00021227497,0.0012326874,0.000042735574,0.0000028462644,0.48587295,0.000096834396,0.51046896,0.00017864734],"about_ca_topic_score_codex":7.0935204e-7,"about_ca_topic_score_gemma":0.0000014773017,"teacher_disagreement_score":0.5092232,"about_ca_system_score_codex":0.000039609302,"about_ca_system_score_gemma":0.00032696873,"threshold_uncertainty_score":0.51809907},"labels":[],"label_agreement":null},{"id":"W2888679019","doi":"10.3390/jdb6030022","title":"Insights into the Etiology of Mammalian Neural Tube Closure Defects from Developmental, Genetic and Evolutionary Studies","year":2018,"lang":"en","type":"review","venue":"Journal of Developmental Biology","topic":"Folate and B Vitamins Research","field":"Medicine","cited_by":77,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Neural tube; Closure (psychology); Etiology; Evolutionary biology; Biology; Psychology; Neuroscience; Genetics; Economics; Psychiatry","score_opus":0.07244431064028058,"score_gpt":0.3659892458589213,"score_spread":0.2935449352186407,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2888679019","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3383312,0.6608693,0.0000017359807,0.000094013216,0.00035031416,0.0002875702,0.000008898459,0.0000036303593,0.000053368112],"genre_scores_gemma":[0.02453514,0.96946543,0.005272244,0.00013125077,0.00037619032,0.000017150756,0.000076543096,0.00002894246,0.000097075594],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99717796,0.00052038056,0.0013732769,0.00034001213,0.00027026143,0.0003180879],"domain_scores_gemma":[0.9982077,0.00048314137,0.00062651513,0.00014773781,0.0003824656,0.00015245492],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032959238,0.00040240993,0.0019679284,0.00045577667,0.00016408038,0.000009068725,0.00035270135,0.0004739126,0.0000673018],"category_scores_gemma":[0.0002507058,0.00021107103,0.00030467042,0.0003190242,0.001033913,0.000057342324,0.0004329495,0.0006924025,0.000034970002],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000620844,0.00036523046,0.036040466,0.008158342,0.010429092,0.000888068,0.005190768,1.7867951e-7,0.0024003442,0.00006272221,0.009842239,0.9260017],"study_design_scores_gemma":[0.0013089379,0.0020802245,0.02708485,0.005059168,0.0010885195,0.0055330754,0.0011320394,0.0000011922058,0.00022219826,0.00045201596,0.9556444,0.00039334974],"about_ca_topic_score_codex":0.00003675569,"about_ca_topic_score_gemma":0.00006922703,"teacher_disagreement_score":0.9458022,"about_ca_system_score_codex":0.00037510003,"about_ca_system_score_gemma":0.0013058389,"threshold_uncertainty_score":0.8607227},"labels":[],"label_agreement":null},{"id":"W2912367592","doi":"10.3390/jdb7010004","title":"The Forgotten Skeletogenic Condensations: A Comparison of Early Skeletal Development Amongst Vertebrates","year":2019,"lang":"en","type":"review","venue":"Journal of Developmental Biology","topic":"Bone Metabolism and Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; Mount Saint Vincent University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Vertebrate; Evolutionary biology; Zebrafish; Skeleton (computer programming); Anatomy; Gene; Genetics","score_opus":0.04353025122060573,"score_gpt":0.34220394434131735,"score_spread":0.2986736931207116,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2912367592","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.030428547,0.96833116,0.00005714088,0.000012470175,0.0006457427,0.0003465698,0.00004501063,0.0000032054013,0.00013013785],"genre_scores_gemma":[0.019418452,0.9782705,0.0014017825,0.000035405345,0.00020358202,0.000026709586,0.00028534638,0.00003907043,0.00031916404],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99731976,0.00023992742,0.0016344348,0.00027294867,0.00020232954,0.000330602],"domain_scores_gemma":[0.9976454,0.00012739189,0.0016406442,0.0002284467,0.00024214323,0.00011597512],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042235528,0.00037982242,0.0013917193,0.0001484245,0.00014579672,0.000031040243,0.0006723411,0.00039231728,0.00002116869],"category_scores_gemma":[0.00017693959,0.00023481691,0.00056426,0.00015632327,0.00023813033,0.000008411424,0.00026070583,0.0002723599,0.000043584863],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012184371,0.00024538877,0.006988,0.0015599203,0.0023620003,0.0000054477164,0.0001480397,4.5822395e-7,0.0031573442,0.00016179628,0.0033818455,0.9818679],"study_design_scores_gemma":[0.0004605142,0.0003216793,0.0008629229,0.00057007757,0.00037031708,0.00011253122,0.00013136878,2.3619819e-7,0.00195963,0.000027086786,0.9948796,0.00030403156],"about_ca_topic_score_codex":0.0000037338446,"about_ca_topic_score_gemma":0.000012819333,"teacher_disagreement_score":0.99149776,"about_ca_system_score_codex":0.000058886933,"about_ca_system_score_gemma":0.0020207758,"threshold_uncertainty_score":0.95755553},"labels":[],"label_agreement":null},{"id":"W2970469141","doi":"10.3390/jdb7030017","title":"Integrins Have Cell-Type-Specific Roles in the Development of Motor Neuron Connectivity","year":2019,"lang":"en","type":"article","venue":"Journal of Developmental Biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal","funders":"National Institute of Neurological Disorders and Stroke; National Institutes of Health; National Science Foundation","keywords":"GABAergic; Neuroscience; Biology; Integrin; Motor neuron; Commissure; Cholinergic; Nervous system; Transmembrane protein; Neuron; Cell biology; Receptor; Spinal cord; Genetics; Inhibitory postsynaptic potential","score_opus":0.014374105834043745,"score_gpt":0.23496525852893568,"score_spread":0.22059115269489193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2970469141","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99754685,0.00056675216,0.0005981507,0.00008163802,0.0004087188,0.00016226034,0.0000037088187,0.0000016847844,0.0006302379],"genre_scores_gemma":[0.9933765,0.00020300053,0.0060752016,0.00015403531,0.0000743913,0.0000020879622,0.000016273258,0.000012561102,0.00008596827],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998725,0.00015073906,0.0005644563,0.00019961227,0.00014154744,0.00021864504],"domain_scores_gemma":[0.9993203,0.000042138043,0.0003140614,0.00015583388,0.00012268906,0.000044927852],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000606762,0.00016217916,0.00026822256,0.00011249374,0.00003981838,0.000010956278,0.0004216448,0.00015029234,0.000039660714],"category_scores_gemma":[0.00004160922,0.00011559044,0.00007694875,0.00007840844,0.00007877233,0.0000058573314,0.00012522857,0.00022009115,0.0000141584005],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001388484,0.00015471422,0.09549669,0.000014665235,0.00003405021,0.0000032746539,0.0024489546,0.000024778135,0.89964813,0.000021449148,0.00014785765,0.0018665869],"study_design_scores_gemma":[0.0010640778,0.0009052466,0.20738123,0.000024863277,0.000008868217,0.00011999714,0.0027270382,0.000008296182,0.7613713,0.00007935783,0.02607776,0.00023193307],"about_ca_topic_score_codex":0.00000464067,"about_ca_topic_score_gemma":0.00009215554,"teacher_disagreement_score":0.1382768,"about_ca_system_score_codex":0.000044295768,"about_ca_system_score_gemma":0.00027145987,"threshold_uncertainty_score":0.47136414},"labels":[],"label_agreement":null},{"id":"W2980575115","doi":"10.3390/jdb7040020","title":"Axin Family of Scaffolding Proteins in Development: Lessons from C. elegans","year":2019,"lang":"en","type":"review","venue":"Journal of Developmental Biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Caenorhabditis elegans; Wnt signaling pathway; Scaffold protein; Biology; Effector; Cell biology; Model organism; Computational biology; Protein family; Signal transduction; Scaffold; Gene; Genetics","score_opus":0.057242559361637066,"score_gpt":0.32259015270313435,"score_spread":0.26534759334149727,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2980575115","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0694772,0.9284813,0.00057973136,0.000020450478,0.0006522126,0.0004801838,0.000073034586,0.00000386888,0.00023204432],"genre_scores_gemma":[0.021151556,0.95955265,0.018425593,0.00006472872,0.0002278633,0.000016291184,0.00034427157,0.00006734244,0.0001497011],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9969145,0.00024076863,0.0017533108,0.0004648948,0.00020575048,0.0004207522],"domain_scores_gemma":[0.99804205,0.00005278747,0.001396251,0.00026039305,0.00013845507,0.00011008092],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00057510077,0.0004904386,0.0017751358,0.0003981506,0.000046625733,0.000018259294,0.000791534,0.00076329726,0.00003133217],"category_scores_gemma":[0.00009454915,0.00041555284,0.0003678529,0.00019933002,0.00011899055,0.000008018919,0.00033653656,0.00042572813,0.000027090115],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010631583,0.00048045738,0.0035021936,0.0038300275,0.0017920536,0.000054378776,0.0012272337,0.0000134192,0.17357852,0.000062356674,0.00054471777,0.8148083],"study_design_scores_gemma":[0.00084152556,0.0003206613,0.0006918061,0.0035221837,0.00020089115,0.00016681632,0.00018362989,6.0104173e-7,0.02582682,0.000056072884,0.96752405,0.00066492584],"about_ca_topic_score_codex":0.000034925757,"about_ca_topic_score_gemma":0.00007761335,"teacher_disagreement_score":0.9669793,"about_ca_system_score_codex":0.0001752165,"about_ca_system_score_gemma":0.0021098992,"threshold_uncertainty_score":0.99982965},"labels":[],"label_agreement":null},{"id":"W2994052732","doi":"10.3390/jdb7040022","title":"Paralogues of Mmp11 and Timp4 Interact during the Development of the Myotendinous Junction in the Zebrafish Embryo","year":2019,"lang":"en","type":"article","venue":"Journal of Developmental Biology","topic":"Protease and Inhibitor Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of New Brunswick","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Cell biology; Sarcomere; Zebrafish; Fibronectin; Extracellular matrix; Biology; Chemistry; Myocyte; Genetics; Gene","score_opus":0.006519899224907585,"score_gpt":0.21966687072347285,"score_spread":0.21314697149856526,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2994052732","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99886113,0.00029978147,0.000026569514,0.0001379021,0.00032723608,0.0001618385,0.0000024687608,6.90952e-7,0.0001823774],"genre_scores_gemma":[0.9991958,0.000049724826,0.0005146676,0.00012436522,0.00005317347,0.0000038084752,0.000005425489,0.0000048994693,0.00004810934],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991038,0.0001245807,0.0004483314,0.00010177219,0.000097233016,0.00012429533],"domain_scores_gemma":[0.99945486,0.000024271274,0.0003461554,0.000107488595,0.00005012188,0.000017124494],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046864862,0.00009484458,0.0001602391,0.00004617723,0.000054231376,0.0000058457476,0.0002720969,0.00008483564,0.000011450296],"category_scores_gemma":[0.000045625566,0.000044665743,0.00006366709,0.000072774084,0.00007108634,0.000007754779,0.0001411686,0.00014140089,0.0000015981678],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000117177806,0.000040843104,0.026041536,0.000016691672,0.000053695436,8.06043e-7,0.00067186676,0.0000015887729,0.9721171,0.0000274317,0.00006231225,0.00084890384],"study_design_scores_gemma":[0.00047266344,0.00020432875,0.1211317,0.000051598214,0.0000069111657,0.00017712612,0.00087576255,0.000001196782,0.87540156,0.00010880764,0.0015058867,0.00006244997],"about_ca_topic_score_codex":0.0000054533552,"about_ca_topic_score_gemma":0.00003124318,"teacher_disagreement_score":0.096715584,"about_ca_system_score_codex":0.000023117636,"about_ca_system_score_gemma":0.0001272083,"threshold_uncertainty_score":0.18214162},"labels":[],"label_agreement":null},{"id":"W3004163999","doi":"10.3390/jdb8010003","title":"Matrix Metalloproteinase 13 Activity is Required for Normal and Hypoxia-Induced Precocious Hatching in Zebrafish Embryos","year":2020,"lang":"en","type":"article","venue":"Journal of Developmental Biology","topic":"Zebrafish Biomedical Research Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of New Brunswick","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Hatching; Zebrafish; Biology; Embryo; Matrix metalloproteinase; Embryogenesis; Cell biology; Hypoxia (environmental); Internal medicine; Endocrinology; Andrology; Anatomy; Chemistry; Biochemistry; Ecology; Medicine; Oxygen","score_opus":0.026913511978308647,"score_gpt":0.31238124637619485,"score_spread":0.2854677343978862,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3004163999","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9920173,0.00022612522,0.0023630469,0.0048278673,0.000051925887,0.00039580217,0.000036089976,0.000004536168,0.000077297984],"genre_scores_gemma":[0.98987216,0.00009951857,0.008885347,0.0008524561,0.00015901426,0.00004254614,0.000027787382,0.000015397145,0.000045775043],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99879116,0.00008537158,0.0004055193,0.00027820384,0.000131096,0.0003086267],"domain_scores_gemma":[0.9992739,0.000059584414,0.00022060254,0.00008056533,0.0000962386,0.0002690904],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044013016,0.00014581268,0.00027813143,0.00008620808,0.00007228204,0.000021387534,0.0002577496,0.00020595541,0.000023418494],"category_scores_gemma":[0.000603156,0.00012836086,0.0000896481,0.00013887048,0.00010310939,0.000018674771,0.00020948266,0.00022199748,0.000004207273],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042675695,0.00006674901,0.001219919,0.000027205051,0.00009186478,0.000009613614,0.0001350234,3.3953205e-7,0.98409396,0.000016429762,0.0006743996,0.013237709],"study_design_scores_gemma":[0.0028457264,0.0015293793,0.012322833,0.000023063769,0.000019154335,0.00018287306,0.00021302963,0.00008945264,0.96671784,0.00040041594,0.015382378,0.00027382982],"about_ca_topic_score_codex":0.000016579388,"about_ca_topic_score_gemma":0.000029019542,"teacher_disagreement_score":0.017376127,"about_ca_system_score_codex":0.000049086302,"about_ca_system_score_gemma":0.00033026093,"threshold_uncertainty_score":0.5234404},"labels":[],"label_agreement":null},{"id":"W3112400077","doi":"10.3390/jdb8040031","title":"Transcriptional Trajectories in Mouse Limb Buds Reveal the Transition from Anterior-Posterior to Proximal-Distal Patterning at Early Limb Bud Stage","year":2020,"lang":"en","type":"article","venue":"Journal of Developmental Biology","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Montréal; Montreal Clinical Research Institute","funders":"Canadian Institutes of Health Research; Compute Canada","keywords":"Limb development; Hox gene; Limb bud; Mesenchyme; Zone of polarizing activity; Biology; Transcriptome; Apical ectodermal ridge; Anatomy; Embryonic stem cell; Mesoderm; Gene; Cell biology; Genetics; Gene expression; Embryo","score_opus":0.013320392622399847,"score_gpt":0.23365337097510294,"score_spread":0.2203329783527031,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3112400077","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963914,0.000363591,0.00062124006,0.0018957765,0.00026184833,0.00023236794,0.00018849336,0.000006875462,0.000038365677],"genre_scores_gemma":[0.9957622,0.00006196111,0.0017891017,0.0016152106,0.0002636467,0.0000133770545,0.00030175314,0.00001693918,0.00017576106],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99848175,0.00017082757,0.00063877413,0.00031078747,0.00012929644,0.0002685935],"domain_scores_gemma":[0.999497,0.000024166155,0.00020627743,0.00007433392,0.00006790839,0.00013028792],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023539361,0.00021772837,0.00029119628,0.00007181418,0.00011907562,0.00002302907,0.000255905,0.00021566209,0.0000705534],"category_scores_gemma":[0.000033189684,0.00016585553,0.00012655625,0.000116448966,0.0001146347,0.000020575188,0.0000946195,0.0001957771,0.000015591624],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002323105,0.00004213798,0.07357338,0.000010308673,0.000092217844,0.00001651754,0.0021803032,0.000013302732,0.91961676,0.0000034474401,0.00009034068,0.0020381704],"study_design_scores_gemma":[0.0013211037,0.0016020125,0.36889413,0.00003500968,0.0000135704795,0.000121456294,0.00064018916,0.0000045103566,0.6217313,0.0000138044925,0.0053495755,0.00027332094],"about_ca_topic_score_codex":0.000021777747,"about_ca_topic_score_gemma":0.00015177588,"teacher_disagreement_score":0.29788545,"about_ca_system_score_codex":0.00009736985,"about_ca_system_score_gemma":0.00013850495,"threshold_uncertainty_score":0.6763392},"labels":[],"label_agreement":null},{"id":"W3139098721","doi":"10.3390/jdb9010008","title":"Timing of Mouse Molar Formation Is Independent of Jaw Length Including Retromolar Space","year":2021,"lang":"en","type":"article","venue":"Journal of Developmental Biology","topic":"dental development and anomalies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Light Source (Canada); University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Foundation for Innovation","keywords":"Molar; Dental lamina; Mandibular second molar; Mandibular first molar; Dentistry; Orthodontics; Anatomy; Biology; Medicine; Pathology","score_opus":0.022581652809646906,"score_gpt":0.26392923846759947,"score_spread":0.24134758565795256,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3139098721","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974106,0.00077104056,0.00058183965,0.000113627735,0.00019427564,0.000047251855,0.00002120909,0.0000019432766,0.0008582322],"genre_scores_gemma":[0.98878706,0.0006501604,0.009879477,0.0001049786,0.00003746395,9.087904e-7,0.00008042712,0.000010444515,0.0004490656],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987992,0.00006844238,0.0006563738,0.00013920195,0.0001694943,0.00016726571],"domain_scores_gemma":[0.9990181,0.000014496879,0.0005670094,0.00008823027,0.0002578721,0.000054330183],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031764866,0.0001324963,0.00030302946,0.00011868796,0.000049586608,0.000008488475,0.00018039906,0.00015915922,0.00007050924],"category_scores_gemma":[0.00009769659,0.000120136334,0.00012245278,0.000119851546,0.00006873794,0.000022359693,0.00023833488,0.00011679266,0.000003370367],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007647834,0.000068922905,0.036746886,0.00004322583,0.00016111963,0.000013737464,0.00035405878,0.0000014217934,0.960687,0.00005623415,0.00059807335,0.0011928697],"study_design_scores_gemma":[0.00061781704,0.00021431105,0.0059789135,0.00006039468,0.00001726361,0.00046598143,0.0010003382,0.000004430595,0.9876881,0.00007374468,0.0037492022,0.00012945155],"about_ca_topic_score_codex":0.0000050563704,"about_ca_topic_score_gemma":0.000012087974,"teacher_disagreement_score":0.030767974,"about_ca_system_score_codex":0.000049901857,"about_ca_system_score_gemma":0.00022046096,"threshold_uncertainty_score":0.48990175},"labels":[],"label_agreement":null},{"id":"W3190067967","doi":"10.3390/jdb9030031","title":"R-Spondin 3 Regulates Mammalian Dental and Craniofacial Development","year":2021,"lang":"en","type":"article","venue":"Journal of Developmental Biology","topic":"dental development and anomalies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institute of Dental and Craniofacial Research; National Institutes of Health","keywords":"Wnt signaling pathway; Mesenchyme; Biology; Craniofacial; Phenotype; Ectoderm; Mesoderm; Cell biology; Embryogenesis; Signal transduction; Genetics; Gene; Embryonic stem cell; Embryo","score_opus":0.007807228987072355,"score_gpt":0.2305333099506804,"score_spread":0.22272608096360802,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3190067967","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971023,0.0009784262,0.00008662146,0.00012290764,0.0005164582,0.000051615654,0.0000062367358,0.00000496025,0.001130435],"genre_scores_gemma":[0.9816529,0.00022439063,0.015231019,0.00028600788,0.00017228596,0.0000027902695,0.00010561376,0.000016547805,0.0023084118],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987533,0.00006373011,0.0005264297,0.00025158413,0.00013539774,0.00026955872],"domain_scores_gemma":[0.99944705,0.000012117951,0.00020107978,0.00007118026,0.00013066913,0.00013791752],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023747383,0.00019935917,0.000261344,0.00010180509,0.00013295545,0.000039911974,0.00016924905,0.00016570961,0.000120140256],"category_scores_gemma":[0.00006757194,0.00017825453,0.00008045315,0.00010714308,0.00013303972,0.000013946725,0.0002609538,0.00010948101,0.000018645838],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011266416,0.00007274986,0.2174404,0.000014514313,0.00015807914,0.000113625654,0.0001984975,2.499797e-7,0.7698449,0.0001526005,0.00086606434,0.011025665],"study_design_scores_gemma":[0.0009735318,0.00014453553,0.15419151,0.000029957115,0.000012904842,0.0025397146,0.0006909964,2.5887957e-7,0.7161383,0.00013755957,0.12486235,0.00027834228],"about_ca_topic_score_codex":0.000001024958,"about_ca_topic_score_gemma":0.000028636692,"teacher_disagreement_score":0.12399629,"about_ca_system_score_codex":0.0000488004,"about_ca_system_score_gemma":0.00041338798,"threshold_uncertainty_score":0.7269009},"labels":[],"label_agreement":null},{"id":"W4200171924","doi":"10.3390/jdb10010001","title":"Loss of Planar Cell Polarity Effector Fuzzy Causes Renal Hypoplasia by Disrupting Several Signaling Pathways","year":2021,"lang":"en","type":"article","venue":"Journal of Developmental Biology","topic":"Renal and related cancers","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Canadian Institutes of Health Research; Kidney Foundation of Canada","keywords":"Cilium; Ureteric bud; Biology; Cell biology; Kidney development; Hypoplasia; Morphogenesis; Convergent extension; Ciliopathies; Wnt signaling pathway; Effector; Phenotype; Internal medicine; Endocrinology; Signal transduction; Genetics; Embryonic stem cell; Anatomy; Gastrulation; Gene; Medicine; Embryogenesis; Embryo","score_opus":0.007545836329559475,"score_gpt":0.22314155363637317,"score_spread":0.2155957173068137,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200171924","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959005,0.0029750934,0.00022732404,0.000070933485,0.00033158425,0.00004376178,0.000090721,0.0000037414468,0.00035633676],"genre_scores_gemma":[0.99490005,0.0005601645,0.003934837,0.00015231164,0.00015894709,0.0000011030181,0.00017396425,0.000012905783,0.00010574643],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987791,0.00013375557,0.0005160591,0.00019861269,0.00012308326,0.00024938042],"domain_scores_gemma":[0.9992478,0.000038382033,0.00039221434,0.0000740976,0.0001383073,0.000109229215],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022285437,0.0001644145,0.00030555096,0.00004928925,0.000071731265,0.000010363436,0.00016199787,0.00025129385,0.000019729414],"category_scores_gemma":[0.00006241103,0.00012921936,0.00015586778,0.000098492106,0.000100830846,0.0000072349458,0.000074879405,0.0002449102,0.000003370241],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020533742,0.000074321375,0.022222929,0.0000363429,0.00022190479,0.00009355095,0.000083832434,0.000023532866,0.97581285,0.000008810663,0.00078526145,0.00043132895],"study_design_scores_gemma":[0.00094202824,0.0003940242,0.0012575985,0.00005702186,0.00003149855,0.00088828977,0.000164482,0.0000015060057,0.99144113,0.00006771102,0.0045832116,0.00017150816],"about_ca_topic_score_codex":0.000012759646,"about_ca_topic_score_gemma":0.000006255752,"teacher_disagreement_score":0.02096533,"about_ca_system_score_codex":0.000054894343,"about_ca_system_score_gemma":0.00039434523,"threshold_uncertainty_score":0.5269413},"labels":[],"label_agreement":null},{"id":"W4224305252","doi":"10.3390/jdb10020015","title":"Two Modulators of Skeletal Development: BMPs and Proteoglycans","year":2022,"lang":"en","type":"review","venue":"Journal of Developmental Biology","topic":"TGF-β signaling in diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research; University of Saskatchewan","keywords":"Cell biology; Bone morphogenetic protein; SMAD; Cartilage; BMPR2; MAPK/ERK pathway; Extracellular matrix; Bone morphogenetic protein 10; Chemistry; Protein kinase A; Signal transduction; Biology; Bone morphogenetic protein 7; Bone morphogenetic protein 2; Kinase; Biochemistry; Anatomy","score_opus":0.03069029294568999,"score_gpt":0.3173825743013694,"score_spread":0.2866922813556794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4224305252","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.023579607,0.97537977,0.000052369713,0.0000042926663,0.0003504033,0.0003591625,0.000049924074,0.0000051182064,0.00021935724],"genre_scores_gemma":[0.0054693455,0.98283803,0.010815845,0.000034475863,0.0002248662,0.0000540542,0.00036669918,0.00006551877,0.00013115922],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9975213,0.00024424115,0.001357367,0.0003676419,0.00020799598,0.00030148475],"domain_scores_gemma":[0.9981944,0.000056552144,0.0013427037,0.00016554868,0.00008253489,0.00015824621],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00047047326,0.00041241295,0.0012035547,0.00028798694,0.00011410278,0.000011914788,0.0005138095,0.00028085583,0.0001367269],"category_scores_gemma":[0.00015697312,0.00033931114,0.00031928334,0.00016084987,0.00019738555,0.0000059235313,0.0004939476,0.00034378545,0.0000037390203],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007721056,0.00020285122,0.00081055105,0.002806234,0.0014888602,0.000038465416,0.00012967926,0.0000029719306,0.0039120014,0.00002991312,0.00024666014,0.9902546],"study_design_scores_gemma":[0.000491556,0.00028932188,0.00005988434,0.00073495717,0.00016279565,0.00081621663,0.000056056033,1.702984e-7,0.0035657764,0.000017757713,0.99343354,0.0003719937],"about_ca_topic_score_codex":0.000002594628,"about_ca_topic_score_gemma":0.0000042208467,"teacher_disagreement_score":0.99318683,"about_ca_system_score_codex":0.00012009574,"about_ca_system_score_gemma":0.002156059,"threshold_uncertainty_score":0.9999059},"labels":[],"label_agreement":null},{"id":"W4281730928","doi":"10.3390/jdb10020021","title":"Radial Glia and Neuronal-like Ependymal Cells Are Present within the Spinal Cord of the Trunk (Body) in the Leopard Gecko (Eublepharis macularius)","year":2022,"lang":"en","type":"article","venue":"Journal of Developmental Biology","topic":"Neurogenesis and neuroplasticity mechanisms","field":"Neuroscience","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Ependymal Cell; Spinal cord; Biology; Anatomy; Lateral funiculus; Neuroscience; Population; Neural stem cell; Progenitor cell; Spinal cord injury; Cell biology; Stem cell; Medicine","score_opus":0.03595385583052914,"score_gpt":0.26166732961428824,"score_spread":0.2257134737837591,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4281730928","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962286,0.00008564532,0.000013387016,0.0014916888,0.0017963643,0.00029327619,0.000029751953,0.0000037401733,0.000057599922],"genre_scores_gemma":[0.9972779,0.00005354951,0.00005563747,0.0024727157,0.0000760721,0.000012751393,4.2693975e-7,0.000013690744,0.00003725892],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9969857,0.0013072707,0.0006373383,0.00028484032,0.0005052778,0.0002795935],"domain_scores_gemma":[0.99868566,0.0003391788,0.0007159054,0.00017061163,0.000029643703,0.000059013444],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00075951725,0.00018776045,0.0002950961,0.00011145684,0.00041827682,0.000037030353,0.0010563956,0.000042884818,0.00005956472],"category_scores_gemma":[0.00015447306,0.00009632549,0.00012649437,0.0003538736,0.000275135,0.00006937331,0.0005834648,0.00070377375,0.0000022823083],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009889195,0.00017706909,0.004685658,0.000009654027,0.000015106803,0.00024227037,0.00031661018,0.00007491634,0.9916599,0.0011075863,0.00034378955,0.0003785607],"study_design_scores_gemma":[0.0012143878,0.001824072,0.06377215,0.00001938911,0.000039749288,0.0046014185,0.00076077535,0.00010845374,0.92054844,0.00032068742,0.0066168923,0.00017356998],"about_ca_topic_score_codex":0.000012278376,"about_ca_topic_score_gemma":0.000013771049,"teacher_disagreement_score":0.0711114,"about_ca_system_score_codex":0.000048763413,"about_ca_system_score_gemma":0.00019104626,"threshold_uncertainty_score":0.39280397},"labels":[],"label_agreement":null},{"id":"W4312127806","doi":"10.3390/jdb10040053","title":"The Development of the Chimaeroid Pelvic Skeleton and the Evolution of Chondrichthyan Pelvic Fins","year":2022,"lang":"en","type":"article","venue":"Journal of Developmental Biology","topic":"Ichthyology and Marine Biology","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Australian Research Council; Curtin University of Technology","keywords":"Pelvic girdle; Appendicular skeleton; Axial skeleton; Biology; Anatomy; Skeleton (computer programming); Context (archaeology); Sacrum; Fish fin; Bipedalism; Morphology (biology); Evolutionary biology; Zoology; Paleontology; Fish <Actinopterygii>; Fishery","score_opus":0.0047128047847250385,"score_gpt":0.19994339906432468,"score_spread":0.19523059427959963,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4312127806","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942038,0.00047616748,0.00005151757,0.0024628714,0.0006402593,0.00017980243,0.000003251066,0.000002452501,0.0019798914],"genre_scores_gemma":[0.9984586,0.000048477843,0.00080298434,0.00020685158,0.00002322764,0.000011735828,0.0000020186255,0.0000053607796,0.00044073007],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982523,0.0004955637,0.0006836708,0.00013679262,0.00020149093,0.0002301973],"domain_scores_gemma":[0.99883515,0.00033649005,0.00063837133,0.0001331445,0.0000227325,0.000034104974],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015303252,0.00012459385,0.00026022145,0.000046187666,0.00068354176,0.000003652921,0.00065464585,0.00006535054,0.00031464448],"category_scores_gemma":[0.00014973014,0.00005777755,0.000093436334,0.00023555568,0.0011688526,0.000042740892,0.0010838393,0.00034078228,0.0000086407335],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015663963,0.00028571466,0.7478405,0.000017999491,0.00039045772,0.0000039692263,0.008138223,0.00012627467,0.20208122,0.0066418755,0.003613605,0.029293712],"study_design_scores_gemma":[0.0022466797,0.00039734022,0.92130435,0.000008635716,0.000040691855,0.0006357782,0.0030632243,0.000025229407,0.007609727,0.0029930996,0.061513685,0.00016158466],"about_ca_topic_score_codex":0.00006708743,"about_ca_topic_score_gemma":0.0003728134,"teacher_disagreement_score":0.1944715,"about_ca_system_score_codex":0.00035097974,"about_ca_system_score_gemma":0.00022183408,"threshold_uncertainty_score":0.5257319},"labels":[],"label_agreement":null},{"id":"W4362614894","doi":"10.3390/jdb11020017","title":"Selecting Normalizers for MicroRNA RT-qPCR Expression Analysis in Murine Preimplantation Embryos and the Associated Conditioned Culture Media","year":2023,"lang":"en","type":"article","venue":"Journal of Developmental Biology","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children’s Health Research Institute; Lawson Health Research Institute; Western University","funders":"Lawson Health Research Institute; Natural Sciences and Engineering Research Council of Canada; Children's Health Research Institute","keywords":"Biology; Blastocyst; Embryo; microRNA; Normalization (sociology); Computational biology; Real-time polymerase chain reaction; Andrology; Cell biology; Genetics; Embryogenesis; Gene; Medicine","score_opus":0.009561623371124388,"score_gpt":0.2650508351196542,"score_spread":0.25548921174852984,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4362614894","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989033,0.00025031582,0.0003788227,0.0001317747,0.000093702445,0.00017313841,0.00004388602,0.000004748596,0.000020316602],"genre_scores_gemma":[0.99757725,0.00019970494,0.0009807444,0.00007690682,0.00007247521,0.000014068674,0.001030355,0.000006984659,0.000041509356],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991466,0.0001375626,0.0003670168,0.00013320222,0.00006630125,0.00014932237],"domain_scores_gemma":[0.9993695,0.00008732222,0.0003482225,0.00004238156,0.00011394563,0.00003859819],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054092467,0.000093933195,0.00020175584,0.00017780425,0.0000871792,0.000013160695,0.000089121386,0.00013100651,0.000009093056],"category_scores_gemma":[0.00033595428,0.00006464288,0.00009070879,0.0003242731,0.000064127555,0.000008753889,0.00004686612,0.000075033255,8.7156235e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004381574,0.000018715013,0.0312544,0.000009528387,0.0003441092,0.0000023904151,0.00042266326,0.00007764518,0.96604204,0.000010795415,0.001122971,0.0002565891],"study_design_scores_gemma":[0.0075218487,0.00017042986,0.3016234,0.000057117384,0.00028726077,0.00010721934,0.0010486435,0.0003061577,0.6870141,0.0005071361,0.0011119678,0.00024472355],"about_ca_topic_score_codex":0.0000043231107,"about_ca_topic_score_gemma":0.00006034203,"teacher_disagreement_score":0.27902794,"about_ca_system_score_codex":0.000043780936,"about_ca_system_score_gemma":0.0000681323,"threshold_uncertainty_score":0.26360604},"labels":[],"label_agreement":null},{"id":"W4380876021","doi":"10.3390/jdb11020028","title":"Regionalized Protein Localization Domains in the Zebrafish Hair Cell Kinocilium","year":2023,"lang":"en","type":"article","venue":"Journal of Developmental Biology","topic":"Hearing, Cochlea, Tinnitus, Genetics","field":"Neuroscience","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of New Brunswick","funders":"Natural Sciences and Engineering Research Council of Canada; Division of Research, Economic Development and Engagement, East Carolina University; East Carolina University; Oregon Health and Science University; Collins Medical Trust","keywords":"Kinocilium; Stereocilia (inner ear); Zebrafish; Cilium; Hair cell; Biology; Cell biology; Bundle; Anatomy; Inner ear; Gene; Genetics","score_opus":0.04386856595863172,"score_gpt":0.28394454590504786,"score_spread":0.24007597994641613,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4380876021","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99530345,0.000030557767,0.0006577134,0.0020577377,0.00030411175,0.00028405938,0.000002928772,0.000024959118,0.0013344628],"genre_scores_gemma":[0.99596673,0.00007303018,0.0015259958,0.001987679,0.00008461453,0.000010863218,0.0000051215898,0.00001429658,0.00033167732],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980984,0.0004692629,0.0005900268,0.00020647279,0.00029837238,0.000337511],"domain_scores_gemma":[0.9992406,0.00022013555,0.00030218542,0.000113234135,0.00005972617,0.0000641241],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009194155,0.00013122316,0.00020418885,0.00028252325,0.00012382351,0.00003246904,0.00048827106,0.00011805549,0.000042680436],"category_scores_gemma":[0.00064328517,0.000093345516,0.000062236155,0.0008540711,0.00015689126,0.000083244326,0.0001222965,0.00029912853,0.00012443191],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001022023,0.00012032247,0.015336783,0.000022582186,0.0000063484404,0.00022501066,0.0024306285,0.000077258686,0.9759115,0.00078339677,0.003932568,0.0010514035],"study_design_scores_gemma":[0.003555302,0.00055107166,0.040634666,0.00012306725,0.000011552546,0.0010247177,0.0015785784,0.00045050832,0.6922922,0.0066248584,0.2526751,0.0004783605],"about_ca_topic_score_codex":0.00001123969,"about_ca_topic_score_gemma":0.000021189699,"teacher_disagreement_score":0.28361925,"about_ca_system_score_codex":0.00012985127,"about_ca_system_score_gemma":0.00029426656,"threshold_uncertainty_score":0.38065195},"labels":[],"label_agreement":null},{"id":"W4387782619","doi":"10.3390/jdb11040039","title":"The New Nematicide Cyclobutrifluram Targets the Mitochondrial Succinate Dehydrogenase Complex in Caenorhabditis elegans","year":2023,"lang":"en","type":"article","venue":"Journal of Developmental Biology","topic":"Nematode management and characterization studies","field":"Agricultural and Biological Sciences","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Tarbiat Modares University; Université de Fribourg; University of Toronto; National Institutes of Health; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung","keywords":"Caenorhabditis elegans; Biology; Nematode; Gene; Mode of action; Transcriptome; Organism; Mitochondrion; Succinate dehydrogenase; Model organism; Cell biology; Genetics; Toxicology; Gene expression; Ecology","score_opus":0.023052110081589063,"score_gpt":0.24453890405075893,"score_spread":0.22148679396916987,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387782619","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9820704,0.0001891435,0.000007412007,0.01679491,0.00050111505,0.00018185843,0.00000878622,0.000017792347,0.00022856906],"genre_scores_gemma":[0.9977679,0.0006018458,0.00014631143,0.0004903543,0.00036829073,0.000008193868,0.00004227089,0.00000129845,0.00057351746],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99882275,0.000119924916,0.0005118643,0.00011063712,0.00014851522,0.00028631501],"domain_scores_gemma":[0.9992167,0.00037243692,0.00027485142,0.0000302783,0.000051178104,0.000054555476],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003394584,0.000120344834,0.00021658807,0.00003219182,0.0003697825,0.00006064802,0.0003890653,0.000046224333,0.00012112744],"category_scores_gemma":[0.00008823974,0.000034222387,0.000083289895,0.0005227699,0.000078226185,0.000078588026,0.0001457787,0.00013308089,0.00006296567],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001748299,0.00007467283,0.0371817,0.0000095648875,0.00021298497,0.000100669284,0.0009321097,0.000010066174,0.84347814,0.0012535483,0.068063736,0.048507992],"study_design_scores_gemma":[0.00096443685,0.00026017064,0.5014019,0.00004110352,0.000023795963,0.000120577286,0.003745692,0.00004135953,0.010931702,0.0049411887,0.4772491,0.00027896266],"about_ca_topic_score_codex":0.000048753194,"about_ca_topic_score_gemma":0.0008480413,"teacher_disagreement_score":0.8325464,"about_ca_system_score_codex":0.000036424768,"about_ca_system_score_gemma":0.0000234651,"threshold_uncertainty_score":0.28441054},"labels":[],"label_agreement":null},{"id":"W4402367531","doi":"10.3390/jdb12030023","title":"Evolution and Spatiotemporal Expression of ankha and ankhb in Zebrafish","year":2024,"lang":"en","type":"article","venue":"Journal of Developmental Biology","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Zebrafish; Expression (computer science); Evolutionary biology; Biology; Computational biology; Geography; Genetics; Computer science; Gene","score_opus":0.006185481089769187,"score_gpt":0.2415907420448196,"score_spread":0.2354052609550504,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402367531","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99471235,0.0044851345,0.00031957965,0.00010740017,0.00019819655,0.00005760478,0.000005535487,0.0000021684789,0.000112030524],"genre_scores_gemma":[0.99610186,0.00038293737,0.0033604018,0.000025782967,0.000052429146,0.0000014162246,0.000032391526,0.000004991055,0.000037822912],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99931675,0.000058206093,0.0003342069,0.00014782438,0.00004345298,0.00009953847],"domain_scores_gemma":[0.99977654,0.0000164962,0.000104170605,0.000032895532,0.000032996515,0.00003691358],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002898038,0.00008773824,0.00014947307,0.00014557967,0.000022335942,0.0000061717897,0.000050212213,0.00016370219,0.0000076263027],"category_scores_gemma":[0.000033266868,0.00007068403,0.000025607134,0.00007892019,0.000119798664,0.000012305904,0.000075507334,0.00007866304,6.5481134e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010154948,0.00001742191,0.15856501,0.000026218864,0.000021379214,0.0000049896553,0.00009704127,0.0000010903659,0.83448243,0.0001069325,0.00016822602,0.006407728],"study_design_scores_gemma":[0.00057019904,0.00038886623,0.41266343,0.00012588843,0.0000073832443,0.00043252498,0.0001737077,0.000015480588,0.5808206,0.0010314971,0.0036416447,0.00012877551],"about_ca_topic_score_codex":0.0000049001023,"about_ca_topic_score_gemma":0.000017923312,"teacher_disagreement_score":0.25409842,"about_ca_system_score_codex":0.00002555908,"about_ca_system_score_gemma":0.00011302637,"threshold_uncertainty_score":0.2882411},"labels":[],"label_agreement":null},{"id":"W4408055582","doi":"10.3390/jdb13010007","title":"Correction: Ko et al. Timing of Mouse Molar Formation Is Independent of Jaw Length Including Retromolar Space. J. Dev. Biol. 2021, 9, 8","year":2025,"lang":"en","type":"erratum","venue":"Journal of Developmental Biology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Light Source (Canada); University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Foundation for Innovation","keywords":"Molar; Space (punctuation); Orthodontics; Mathematics; Computer science; Medicine","score_opus":0.016630140687185508,"score_gpt":0.29680171484982243,"score_spread":0.28017157416263694,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408055582","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5571469,0.0370865,0.25878987,0.015892878,0.04741748,0.004914165,0.003041849,0.00012088287,0.07558947],"genre_scores_gemma":[0.7248608,0.08679762,0.1080668,0.00879536,0.0011116208,0.00016642413,0.011746612,0.00024962862,0.058205146],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99768615,0.00020791733,0.0012528406,0.00037351018,0.00020715134,0.0002724055],"domain_scores_gemma":[0.9972534,0.00003482775,0.0017961633,0.0003026437,0.0005346124,0.00007836106],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007390299,0.00035180425,0.0007059017,0.00040194768,0.00010281641,0.000012081922,0.0005182774,0.0010071476,0.000077680044],"category_scores_gemma":[0.00021342942,0.00032252268,0.000329077,0.00024314229,0.00015987386,0.000014522478,0.00045721876,0.00079974893,0.0000024251],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000073441784,0.0000798489,0.00048339478,0.000052704178,0.0002959369,0.0000031224267,0.00005157082,0.0000012897685,0.50363064,0.000058583784,0.49357948,0.0016899969],"study_design_scores_gemma":[0.0003398481,0.00045680694,0.00012417397,0.00023326662,0.000058786034,0.00022262188,0.000104398365,0.000024804825,0.56375986,0.00006413025,0.43438983,0.00022144639],"about_ca_topic_score_codex":0.000041781503,"about_ca_topic_score_gemma":0.000031340638,"teacher_disagreement_score":0.16771388,"about_ca_system_score_codex":0.00013706725,"about_ca_system_score_gemma":0.0007780436,"threshold_uncertainty_score":0.9999227},"labels":[],"label_agreement":null},{"id":"W4414487696","doi":"10.3390/jdb13040034","title":"Exploring the Regulation of Tmem182 Gene Expression in the Context of Retinoid X Receptor Signaling","year":2025,"lang":"en","type":"article","venue":"Journal of Developmental Biology","topic":"Retinoids in leukemia and cellular processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada; Umm Al-Qura University","keywords":"MyoD; Retinoid X receptor; Myogenesis; Myogenic regulatory factors; Regulation of gene expression; Retinoid X receptor alpha; Histone; Histone acetyltransferase; Gene expression; Epigenetics","score_opus":0.025168947823978695,"score_gpt":0.25496580301977245,"score_spread":0.22979685519579376,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414487696","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975692,0.0011448455,0.0005223066,0.00018050973,0.00021879919,0.000082780665,0.000002301272,7.570282e-7,0.000278469],"genre_scores_gemma":[0.9966197,0.0006101149,0.0025440427,0.000102931015,0.00006683252,0.00000650701,0.000014764238,0.0000040980476,0.00003098991],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990055,0.00017519502,0.0005262198,0.00009930884,0.000092600414,0.0001011517],"domain_scores_gemma":[0.999318,0.00007485253,0.00036280107,0.00010284445,0.00012947658,0.000012000399],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00070316397,0.00008257023,0.00016945713,0.00007068073,0.000043933174,0.0000043741948,0.00030026972,0.00007982968,0.000007679303],"category_scores_gemma":[0.00017895548,0.00004660473,0.00006894876,0.00014304958,0.00012152305,0.0000073092333,0.000070899914,0.00011995891,3.5678227e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017217497,0.000029329907,0.008963288,0.000025737045,0.000030644915,5.0921756e-7,0.0005066625,0.0000143734105,0.98594457,0.00007961936,0.00017773871,0.004055365],"study_design_scores_gemma":[0.00037340776,0.00013804794,0.004542818,0.000102228674,0.000008628428,0.000020844302,0.0021843985,0.0000011561592,0.9895155,0.00014489595,0.002920184,0.000047884823],"about_ca_topic_score_codex":0.0000031776847,"about_ca_topic_score_gemma":0.0000019661725,"teacher_disagreement_score":0.0044204695,"about_ca_system_score_codex":0.000024048466,"about_ca_system_score_gemma":0.00017391775,"threshold_uncertainty_score":0.19004858},"labels":[],"label_agreement":null}]}