{"meta":{"query_hash":"f064664e0647","filters":{"venue":"Journal of Natural Medicines"},"cohort_total":6,"direct_labels_cover":0,"predictions_cover":6,"exported":6,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/f064664e0647","api":"https://metacan.xera.ac/api/v1/cohort?venue=Journal+of+Natural+Medicines"},"results":[{"id":"W1741770183","doi":"10.1007/s11418-015-0937-1","title":"In vitro antituberculosis activity of diterpenoids from the Vietnamese medicinal plant Croton tonkinensis","year":2015,"lang":"en","type":"article","venue":"Journal of Natural Medicines","topic":"Bioactive Natural Diterpenoids Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Ministry of Health, British Columbia","keywords":"Croton; Vietnamese; Traditional medicine; In vitro; Biology; Medicine","score_opus":0.019536248502590732,"score_gpt":0.31194026385504203,"score_spread":0.2924040153524513,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1741770183","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9805139,0.01015299,0.000018698605,0.008127081,0.0008947903,0.00017968885,0.000038464066,0.0000016001245,0.00007282808],"genre_scores_gemma":[0.99721134,0.00046988003,0.00027170338,0.00064892025,0.0013052337,0.0000026926784,0.000030815147,0.000012328014,0.00004708018],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99809796,0.00024602146,0.00044373673,0.00019126786,0.0007796833,0.00024136074],"domain_scores_gemma":[0.9985227,0.00017062548,0.00036108,0.0002489947,0.0005409765,0.00015559891],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00085122156,0.0001817154,0.00042968342,0.00014281813,0.000030993484,0.000012815236,0.00048388971,0.0001802587,0.000023121233],"category_scores_gemma":[0.0013875646,0.00009630967,0.00014718804,0.00026646839,0.0002777018,0.000025979158,0.00013549872,0.0006963556,9.995737e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027516673,0.00008447878,0.0052340226,0.0000174736,0.000120897406,0.00006556877,0.00027962375,0.0000026518414,0.9753892,0.0000018792042,0.009155338,0.0068971897],"study_design_scores_gemma":[0.0024428796,0.0009312969,0.07788081,0.00021638702,0.000060673825,0.00019755095,0.00041065342,0.00010782795,0.9114486,0.00011895864,0.006032123,0.00015225822],"about_ca_topic_score_codex":0.00038604427,"about_ca_topic_score_gemma":0.000109232824,"teacher_disagreement_score":0.07264678,"about_ca_system_score_codex":0.000062398576,"about_ca_system_score_gemma":0.0001925087,"threshold_uncertainty_score":0.39273942},"labels":[],"label_agreement":null},{"id":"W1980921743","doi":"10.1007/s11418-014-0844-x","title":"Resin glycosides from Ipomoea tyrianthina and their sedative and vasorelaxant effects","year":2014,"lang":"en","type":"article","venue":"Journal of Natural Medicines","topic":"Carbohydrate Chemistry and Synthesis","field":"Chemistry","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Consejo Nacional de Ciencia y Tecnología","keywords":"Chemistry; Glycoside; Stereochemistry; Tetrasaccharide; Triterpene; Organic chemistry; Polysaccharide","score_opus":0.003945730598032974,"score_gpt":0.20098508098049525,"score_spread":0.19703935038246229,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1980921743","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98680705,0.010360969,0.000019006824,0.0017373987,0.000272397,0.00002260603,0.000006589401,0.000011947305,0.00076201296],"genre_scores_gemma":[0.9977168,0.0006302951,0.0002343197,0.00017365445,0.0011151442,8.7183037e-7,0.0000035481744,0.0000122524825,0.000113108996],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991531,0.00004688962,0.00031033935,0.00015480687,0.00019135704,0.00014354069],"domain_scores_gemma":[0.9975009,0.0018158762,0.00029989716,0.00013048835,0.00010277865,0.00015008812],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026189713,0.000186848,0.00044015332,0.00004456717,0.00006997784,0.00003153003,0.00012557404,0.000121338184,0.00006070036],"category_scores_gemma":[0.0014984349,0.000108506065,0.00006845977,0.00005826893,0.00016920998,0.00013003833,0.000043879623,0.0004168167,7.0900074e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002099175,0.000019674362,0.0016183613,0.00017232778,0.00013994004,0.000060992388,0.0009901425,3.8391647e-7,0.9705253,0.000016029073,0.0009919067,0.025254998],"study_design_scores_gemma":[0.0015130198,0.00009013489,0.005016895,0.0013262146,0.00016535177,0.00037233316,0.0010858622,0.00045747656,0.9852611,0.0020905521,0.0024278972,0.00019315525],"about_ca_topic_score_codex":0.000025743928,"about_ca_topic_score_gemma":0.00000602905,"teacher_disagreement_score":0.025061844,"about_ca_system_score_codex":0.000022711341,"about_ca_system_score_gemma":0.000020248304,"threshold_uncertainty_score":0.44247487},"labels":[],"label_agreement":null},{"id":"W1987047518","doi":"10.1007/s11418-012-0657-8","title":"Comparative extrapyramidal effects of Rauwolfia vomitoria, chlorpromazine and reserpine in mice","year":2012,"lang":"en","type":"article","venue":"Journal of Natural Medicines","topic":"Alkaloids: synthesis and pharmacology","field":"Pharmacology, Toxicology and Pharmaceutics","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Reserpine; Chlorpromazine; Dopaminergic; Motor coordination; Chemistry; Internal medicine; Endocrinology; Pharmacology; Dopamine; Medicine","score_opus":0.0675635435802312,"score_gpt":0.4427130913782962,"score_spread":0.375149547798065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987047518","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94466573,0.04560179,0.0000066585494,0.0015771074,0.0076670386,0.0002468567,0.0000031957356,0.0000064660376,0.00022516894],"genre_scores_gemma":[0.9946016,0.0016996086,0.00020421634,0.0005889315,0.0027653927,0.0000056347667,0.000001760902,0.0000115553075,0.00012127511],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99796295,0.0005551308,0.0007473339,0.00012209234,0.0002336778,0.0003788345],"domain_scores_gemma":[0.9965214,0.0023286354,0.0005983499,0.000068721594,0.0002117327,0.00027114598],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014670017,0.00021355579,0.00082163746,0.00030802347,0.000056777553,0.000003942753,0.00021757469,0.00024650095,0.00015441356],"category_scores_gemma":[0.00047897236,0.00014826976,0.00009369136,0.00026273553,0.00035626988,0.00027246558,0.000048799644,0.00117585,0.0000044673766],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002497265,0.0005384888,0.05187875,0.00025854676,0.00037049927,0.00009251772,0.0034925889,0.0000109013945,0.92053986,0.00013664212,0.01404532,0.0061386367],"study_design_scores_gemma":[0.010808409,0.0013693956,0.30252486,0.0003749523,0.0006532579,0.0006552817,0.0006203106,0.00032058876,0.64298326,0.00032367386,0.03902788,0.00033815566],"about_ca_topic_score_codex":0.000014908677,"about_ca_topic_score_gemma":0.000011898057,"teacher_disagreement_score":0.2775566,"about_ca_system_score_codex":0.00005266422,"about_ca_system_score_gemma":0.000058689227,"threshold_uncertainty_score":0.6046265},"labels":[],"label_agreement":null},{"id":"W2518721893","doi":"10.1007/s11418-016-1041-x","title":"De novo transcriptome assembly and characterization of nine tissues of Lonicera japonica to identify potential candidate genes involved in chlorogenic acid, luteolosides, and secoiridoid biosynthesis pathways","year":2016,"lang":"en","type":"article","venue":"Journal of Natural Medicines","topic":"Phytochemistry and Biological Activities","field":"Agricultural and Biological Sciences","cited_by":91,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Japan Society for the Promotion of Science; Chiba University; Ministry of Education, Culture, Sports, Science and Technology; Research Organization of Information and Systems","keywords":"Japonica; Transcriptome; Chlorogenic acid; Biology; Luteolin; Metabolic pathway; Metabolomics; Gene; Secondary metabolite; Botany; Biochemistry; Gene expression; Flavonoid; Bioinformatics","score_opus":0.013753759205276274,"score_gpt":0.23734234173505767,"score_spread":0.2235885825297814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2518721893","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935722,0.0025802406,0.000004903186,0.0036059988,0.00009848383,0.00008038791,0.000050097737,0.0000046329583,0.0000031060001],"genre_scores_gemma":[0.997819,0.0018116143,0.00004543238,0.00009144255,0.00020850611,0.0000017288941,0.000005605651,9.191835e-7,0.000015751795],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990539,0.000063833744,0.00041974333,0.00013184946,0.00016891838,0.00016176644],"domain_scores_gemma":[0.999308,0.00015738363,0.00029790684,0.000029266163,0.00011031238,0.00009715939],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030283746,0.000121301186,0.00038062895,0.000040947936,0.0000316121,0.000012005265,0.00014279179,0.00009808835,0.00003900141],"category_scores_gemma":[0.00015333273,0.000039245697,0.000061582745,0.00015820972,0.00012689362,0.00019695914,0.000035870602,0.00009351291,1.3235571e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033170445,0.000041912423,0.010741879,0.000035028155,0.000026630318,0.000013261341,0.00007372801,7.197802e-8,0.9527759,0.000002919115,0.000005172115,0.035951782],"study_design_scores_gemma":[0.00026087635,0.0003674399,0.3440524,0.00023596549,0.000022821754,0.00007034534,0.00010195838,0.0000032863588,0.6546899,0.00006762992,0.0000644777,0.000062877116],"about_ca_topic_score_codex":0.000031489486,"about_ca_topic_score_gemma":0.000067104294,"teacher_disagreement_score":0.33331054,"about_ca_system_score_codex":0.000017584489,"about_ca_system_score_gemma":0.000013930713,"threshold_uncertainty_score":0.1600393},"labels":[],"label_agreement":null},{"id":"W4408663381","doi":"10.1007/s11418-025-01881-y","title":"Multi-omics analysis reveals tissue-specific biosynthesis and accumulation of diterpene alkaloids in Aconitum japonicum","year":2025,"lang":"en","type":"article","venue":"Journal of Natural Medicines","topic":"Plant-based Medicinal Research","field":"Pharmacology, Toxicology and Pharmaceutics","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Ministry of Education, Culture, Sports, Science and Technology; Japan Society for the Promotion of Science; Chiba University; Research Organization of Information and Systems; Japan Agency for Medical Research and Development","keywords":"Diterpene; Metabolome; Aconitum; Transcriptome; Biology; Metabolomics; Computational biology; Alkaloid; Metabolite; Secondary metabolite; Metabolic pathway; Gene; Biochemistry; Gene expression; Botany; Bioinformatics","score_opus":0.1634467223458132,"score_gpt":0.511779645955794,"score_spread":0.34833292360998075,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408663381","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97720957,0.015895836,0.00017242717,0.0053905197,0.0010096502,0.0002143535,0.000020341371,0.0000081046755,0.00007920978],"genre_scores_gemma":[0.9943585,0.003674057,0.0007986008,0.0006348623,0.0001991136,0.000002678373,0.000010859617,0.000007405876,0.00031396231],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99779946,0.00045626095,0.0009024742,0.00017805451,0.00037193086,0.0002918418],"domain_scores_gemma":[0.9961873,0.0026603655,0.0004621104,0.0001340316,0.00038560343,0.00017054961],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024805404,0.00017294819,0.00077465834,0.001646142,0.000061108185,0.000009712853,0.0002867491,0.00025059175,0.00012603737],"category_scores_gemma":[0.0017664805,0.00012494401,0.00011414912,0.0012308261,0.00026070885,0.00015390772,0.00005823332,0.0010937079,0.000001992091],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022902943,0.00023656923,0.088669516,0.00020093273,0.00093940663,0.00023606441,0.00043875215,0.00019776178,0.8626177,0.00005086815,0.0030089284,0.041113243],"study_design_scores_gemma":[0.009290452,0.00064295524,0.70298404,0.0010170944,0.0026804172,0.00015132068,0.00092462834,0.016758148,0.25224972,0.0004452297,0.012519616,0.00033639517],"about_ca_topic_score_codex":0.000027658474,"about_ca_topic_score_gemma":0.000061021172,"teacher_disagreement_score":0.6143145,"about_ca_system_score_codex":0.00012647128,"about_ca_system_score_gemma":0.00014353952,"threshold_uncertainty_score":0.50950694},"labels":[],"label_agreement":null},{"id":"W4409242895","doi":"10.1007/s11418-025-01895-6","title":"Processing reduces diester diterpenoid alkaloids content of fuzi products, resulting in reduced toxicity and modified bioactivities","year":2025,"lang":"en","type":"article","venue":"Journal of Natural Medicines","topic":"Plant-based Medicinal Research","field":"Pharmacology, Toxicology and Pharmaceutics","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Terpenoid; Chemistry; Traditional medicine; Food science; Organic chemistry; Stereochemistry; Medicine","score_opus":0.15905536112692273,"score_gpt":0.4576923352185339,"score_spread":0.29863697409161116,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409242895","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9663979,0.016865263,0.000008328044,0.0146589605,0.0013412684,0.00027901554,0.000009719425,0.000009301141,0.00043024716],"genre_scores_gemma":[0.9970555,0.0009807432,0.0001834977,0.0007929584,0.00042330983,0.000005557923,0.0000038997705,0.000008599978,0.0005459909],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977943,0.00038825138,0.0008503074,0.00020597508,0.0004113847,0.00034982472],"domain_scores_gemma":[0.9975047,0.0011623506,0.0005229255,0.00009151225,0.00058357755,0.00013495241],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023567376,0.00019040192,0.00061924313,0.00065529556,0.00009859221,0.000017627279,0.0002474069,0.0001738545,0.00001073823],"category_scores_gemma":[0.004108921,0.00012755381,0.000051418534,0.00047218916,0.00053771934,0.0002768427,0.00007456052,0.0014942624,2.5816405e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0039422787,0.000229404,0.0056068557,0.00068731344,0.00012894846,0.00014274691,0.0018405142,0.00001801735,0.9244804,0.00003147519,0.0015871498,0.061304912],"study_design_scores_gemma":[0.0075800135,0.0008783916,0.045329425,0.0037536116,0.00027066938,0.00031556163,0.0049450155,0.0013152306,0.9327675,0.0002292329,0.0023803315,0.00023498539],"about_ca_topic_score_codex":0.000023058517,"about_ca_topic_score_gemma":0.000028126871,"teacher_disagreement_score":0.061069928,"about_ca_system_score_codex":0.00008887412,"about_ca_system_score_gemma":0.00038895028,"threshold_uncertainty_score":0.64919096},"labels":[],"label_agreement":null}]}