{"meta":{"query_hash":"0e335805b1a8","filters":{"venue":"Medical Mycology"},"cohort_total":137,"direct_labels_cover":0,"predictions_cover":137,"exported":137,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/0e335805b1a8","api":"https://metacan.xera.ac/api/v1/cohort?venue=Medical+Mycology"},"results":[{"id":"W1263402079","doi":"10.1093/mmy/myv061","title":"Pitfalls in Serological Diagnosis of<i>Cryptococcus gattii</i>Infections","year":2015,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Qatar Foundation","keywords":"Cryptococcus gattii; Cryptococcosis; Cryptococcus neoformans; Serology; Cryptococcus; Latex fixation test; Antigen; Biology; Virology; Microbiology; Antibody; Immunology","score_opus":0.0471112402666648,"score_gpt":0.3365515910402811,"score_spread":0.2894403507736163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1263402079","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9742551,0.00047402937,0.00014077334,0.008016432,0.0006506502,0.0003278315,0.0000034229972,0.00005864596,0.016073145],"genre_scores_gemma":[0.9973088,0.0003375131,0.00019175408,0.0015257215,0.0001856444,0.00028746604,0.000004698788,0.000007837821,0.00015057552],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99875015,0.00013506548,0.0003638066,0.00020544547,0.0002717023,0.00027382752],"domain_scores_gemma":[0.99880254,0.0005544424,0.00004847173,0.00015568367,0.00012400628,0.0003148494],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00054099894,0.00011026946,0.00048404039,0.00017256982,0.00003625161,0.0000022666577,0.00006900434,0.0002927185,0.0012824893],"category_scores_gemma":[0.0033949255,0.000080984515,0.00008560639,0.00038302192,0.00033022382,0.000024660145,0.00009332814,0.00040407522,0.0001214288],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008718277,0.0013337485,0.97270775,0.00003018869,0.00005859254,0.0002087376,0.00016712691,0.000009704267,0.00008800142,0.0024112274,0.020881606,0.0020161439],"study_design_scores_gemma":[0.0046013333,0.004921229,0.86472857,0.00010708596,0.00010115388,0.0003824009,0.00024356222,0.00018970731,0.00035154127,0.0021599142,0.12203021,0.00018328472],"about_ca_topic_score_codex":0.00025432807,"about_ca_topic_score_gemma":0.00038030805,"teacher_disagreement_score":0.10797917,"about_ca_system_score_codex":0.00007615579,"about_ca_system_score_gemma":0.0001947775,"threshold_uncertainty_score":0.99963045},"labels":[],"label_agreement":null},{"id":"W1521075280","doi":"10.1002/9780470057414.ch9","title":"Microarrays for Studying Pathogenicity in <i>Candida Albicans</i>","year":2006,"lang":"en","type":"other","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Candida albicans; DNA microarray; Microarray; Pathogenicity; Corpus albicans; Computational biology; Biology; Oligonucleotide; Microarray analysis techniques; Microbiology; DNA; Genetics; Gene; Gene expression","score_opus":0.014239482566535648,"score_gpt":0.29777051920859277,"score_spread":0.28353103664205714,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1521075280","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.045861244,0.008264214,0.005192401,0.004026913,0.002059258,0.005454211,0.00041051974,0.00043189852,0.92829937],"genre_scores_gemma":[0.19174445,0.0007442188,0.0026239825,0.0076985075,0.002726385,0.00057025545,0.00062720914,0.00069172605,0.7925733],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99774086,0.000118465134,0.0005009838,0.0006299667,0.00042982318,0.00057991006],"domain_scores_gemma":[0.9988568,0.00032607652,0.00013858436,0.00038766096,0.000040461928,0.00025043456],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00065231975,0.00028849562,0.0010335564,0.00022727592,0.000035435896,0.0000046649725,0.00020342923,0.0011391168,0.0044209994],"category_scores_gemma":[0.00076112506,0.00024087632,0.00020838832,0.00017472114,0.00032575915,0.000008618258,0.000060687817,0.0006308814,0.00004473485],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034343143,0.000604178,0.088627666,0.000595711,0.00008296121,0.00047289356,0.000041708638,7.6601665e-8,0.00073231175,0.00014955405,0.9022811,0.006068381],"study_design_scores_gemma":[0.0037864395,0.0004336136,0.035731662,0.0004984562,0.00013601543,0.000035042918,0.000057044952,0.000018208455,0.000037584225,0.00016691316,0.9588197,0.0002793172],"about_ca_topic_score_codex":0.00090496853,"about_ca_topic_score_gemma":0.019291203,"teacher_disagreement_score":0.1458832,"about_ca_system_score_codex":0.0001554057,"about_ca_system_score_gemma":0.0005748999,"threshold_uncertainty_score":0.9986042},"labels":[],"label_agreement":null},{"id":"W1933326655","doi":"10.3109/13693786.2011.584218","title":"Invasive Myceliophthora thermophila infection mimicking invasive aspergillosis in a neutropenic patient: a new cause of cross-reactivity with the Aspergillus galactomannan serum antigen assay","year":2011,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Galactomannan; Aspergillosis; Voriconazole; Biology; Aspergillus; Cross-reactivity; Microbiology; Neutropenia; Malignancy; Immunology; Antigen; Cross reactions; Chemotherapy","score_opus":0.03707104337940514,"score_gpt":0.2938890728167935,"score_spread":0.25681802943738835,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1933326655","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99353224,0.00020106944,0.000049503935,0.0013202892,0.00017759875,0.0008343157,0.000008993864,0.000042523694,0.0038334874],"genre_scores_gemma":[0.9982271,0.00041506594,0.000063062456,0.0009970162,0.00009867111,0.000044166696,0.000011268586,0.0000366577,0.00010696502],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9970188,0.00057455985,0.0005839064,0.0005797568,0.0006750836,0.0005678796],"domain_scores_gemma":[0.99766034,0.0007938878,0.00032744656,0.000597482,0.00026837268,0.000352486],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0009146048,0.00030871367,0.00076407206,0.00021059532,0.00012978743,0.0000141683095,0.00025230844,0.00045225446,0.001325893],"category_scores_gemma":[0.00241897,0.00019017742,0.00017212043,0.0006587214,0.00085397036,0.00020453043,0.00016980559,0.000852808,0.000031919688],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018923141,0.00064597913,0.9748541,0.0001166913,0.00018627274,0.0008107884,0.002887121,0.0000023649352,0.01481918,0.0001470594,0.00019042808,0.003447694],"study_design_scores_gemma":[0.0018721917,0.0017906609,0.9732198,0.00029265688,0.0001158418,0.00020750242,0.00030275734,0.000018023049,0.0216643,0.00015875517,0.00016822215,0.00018929855],"about_ca_topic_score_codex":0.0039314106,"about_ca_topic_score_gemma":0.018008282,"teacher_disagreement_score":0.014076873,"about_ca_system_score_codex":0.00019196574,"about_ca_system_score_gemma":0.001282418,"threshold_uncertainty_score":0.99991053},"labels":[],"label_agreement":null},{"id":"W1967584821","doi":"10.1080/13693780500036019","title":"Sub-clinical infection and asymptomatic carriage of<i>Cryptococcus gattii</i>in dogs and cats during an outbreak of cryptococcosis","year":2005,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of British Columbia; Vancouver Coastal Health; University of Saskatchewan","funders":"","keywords":"Cryptococcus gattii; CATS; Cryptococcosis; Outbreak; Carriage; Asymptomatic; Cryptococcus; Medicine; Serotype; Veterinary medicine; Biology; Virology; Pathology; Microbiology; Internal medicine","score_opus":0.017756499136193194,"score_gpt":0.33629824584081486,"score_spread":0.31854174670462165,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1967584821","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975351,0.00039587717,0.000033849763,0.00083090935,0.00017669218,0.0004269297,0.000003516765,0.000026952355,0.00057014485],"genre_scores_gemma":[0.9983026,0.0009883072,0.00024595886,0.00018337228,0.00018732161,0.00006403099,0.0000028501745,0.000010843422,0.000014741551],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984754,0.0001796608,0.0006817142,0.00025594258,0.00019159536,0.00021568681],"domain_scores_gemma":[0.9989476,0.00046115837,0.00012509766,0.00016412575,0.00007320639,0.00022879217],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006853768,0.00013028145,0.00067423214,0.00020060003,0.000052957657,0.0000032571575,0.000037471727,0.00027778576,0.00014460128],"category_scores_gemma":[0.001000645,0.00010614362,0.00006263326,0.00017818467,0.0004859548,0.000063561136,0.00008556119,0.00030900218,0.000003813904],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012419993,0.0005451335,0.98223877,0.00030969534,0.00008373651,0.000023006203,0.00036752113,0.0000019756744,0.005828371,0.00020713964,0.000095482115,0.01017494],"study_design_scores_gemma":[0.002829218,0.0010516131,0.99312425,0.00016470798,0.00009359464,0.00013653022,0.000053493924,0.00033142348,0.001700648,0.000108617685,0.00032022878,0.000085695785],"about_ca_topic_score_codex":0.0004373528,"about_ca_topic_score_gemma":0.0012221052,"teacher_disagreement_score":0.01088543,"about_ca_system_score_codex":0.000036502366,"about_ca_system_score_gemma":0.000071564835,"threshold_uncertainty_score":0.43284112},"labels":[],"label_agreement":null},{"id":"W1969590117","doi":"10.3109/13693780903225805","title":"<i>Phialosimplex</i>, a new anamorphic genus associated with infections in dogs and having phylogenetic affinity to the Trichocomaceae","year":2010,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Infectious Diseases and Mycology","field":"Veterinary","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; University of British Columbia; RMIT University; University of Northern British Columbia; University of Nebraska Medical Center","keywords":"Biology; Paecilomyces; Phylogenetic tree; Internal transcribed spacer; Conidium; Genus; Microbiology; Phylogenetics; Aspergillus; Penicillium; Botany; Zoology; Genetics; Gene","score_opus":0.0202439806573667,"score_gpt":0.2987976330768954,"score_spread":0.2785536524195287,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969590117","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934753,0.00008133932,0.0001293317,0.004231148,0.00061469,0.00059450284,0.00001664648,0.000084883344,0.0007721215],"genre_scores_gemma":[0.9958443,0.000025426874,0.000049858234,0.0034919677,0.00033343167,0.0001738026,0.000012074694,0.000024168208,0.000044980105],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982346,0.000367819,0.00029050195,0.00037297513,0.00019169944,0.00054238],"domain_scores_gemma":[0.9981414,0.0009932513,0.000085281994,0.0002776489,0.00005594155,0.00044646076],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005897411,0.00019492899,0.00034343934,0.00020026015,0.00023107976,0.0000256778,0.00023252484,0.00038507578,0.0014686192],"category_scores_gemma":[0.0022710622,0.00013364459,0.00005256978,0.00059316395,0.00022088549,0.00003290636,0.0001973092,0.00084823085,0.00005523926],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005295146,0.0011930862,0.956886,0.000021695336,0.00018253204,0.0009879671,0.0009226855,0.000027070382,0.006112874,0.0020815998,0.011109193,0.019945813],"study_design_scores_gemma":[0.0020207788,0.0024011019,0.9621987,0.000016242155,0.00006778427,0.001119452,0.000031616182,0.00020678583,0.000010712905,0.00069767993,0.031013707,0.0002154522],"about_ca_topic_score_codex":0.0027147944,"about_ca_topic_score_gemma":0.093014464,"teacher_disagreement_score":0.090299666,"about_ca_system_score_codex":0.00008001067,"about_ca_system_score_gemma":0.0004018473,"threshold_uncertainty_score":0.9994442},"labels":[],"label_agreement":null},{"id":"W1980642853","doi":"10.1080/13693780600917217","title":"Asthma and mould allergy – Does it matter?","year":2006,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Asthma and respiratory diseases","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Asthma; Allergy; Respiratory allergy; Medicine; Environmental health; Respiratory system; Intensive care medicine; Immunology; Internal medicine; Allergen","score_opus":0.004987321339341672,"score_gpt":0.2553031847514591,"score_spread":0.2503158634121174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1980642853","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94612455,0.00089776143,0.00014374235,0.030487996,0.0003239352,0.00015504708,0.000005626403,0.000064858534,0.021796456],"genre_scores_gemma":[0.97370017,0.00006092259,0.0001389463,0.018531492,0.0007763673,0.000025750407,0.000019869261,0.000017156422,0.006729309],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.998931,0.00006184401,0.00022153014,0.00023821216,0.00027763937,0.00026979353],"domain_scores_gemma":[0.9993516,0.000106947526,0.000035413166,0.0001414252,0.000029574065,0.00033502205],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00011036542,0.000114987604,0.00026974463,0.00006821571,0.00005569333,0.0000059715617,0.00006754922,0.00024644702,0.011664428],"category_scores_gemma":[0.0001270829,0.00006958745,0.00005185729,0.00006337948,0.00033025377,0.000020955129,0.00006549925,0.00019079233,0.00028029646],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005141302,0.0011704958,0.2706772,0.0002846834,0.00013344079,0.004159617,0.00012979656,0.0000033949027,0.0037762295,0.0031233954,0.6626163,0.05341128],"study_design_scores_gemma":[0.0011445503,0.00023742142,0.33467966,0.00003422081,0.000017749797,0.00026037983,0.00006394257,0.000057769605,0.00011572007,0.00033232532,0.6629669,0.000089342575],"about_ca_topic_score_codex":0.00007708199,"about_ca_topic_score_gemma":0.00013002138,"teacher_disagreement_score":0.06400243,"about_ca_system_score_codex":0.000016709435,"about_ca_system_score_gemma":0.00011144354,"threshold_uncertainty_score":0.98923904},"labels":[],"label_agreement":null},{"id":"W1988429363","doi":"10.1080/13693780600803870","title":"Cerebral blastomycosis: a case series incorporating voriconazole in the treatment regimen","year":2006,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McMaster University; Trillium Health Centre; University Health Network; William Osler Health System","funders":"","keywords":"Blastomycosis; Voriconazole; Itraconazole; Medicine; Blastomyces dermatitidis; Concomitant; Regimen; Dermatology; Surgery; Antifungal","score_opus":0.012726951827770882,"score_gpt":0.2787486560889408,"score_spread":0.2660217042611699,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988429363","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9835451,0.00035548213,0.000046662266,0.009206414,0.00011080378,0.00037205414,0.0000039227425,0.000036608195,0.006322947],"genre_scores_gemma":[0.99716556,0.000032952757,0.00024320534,0.0011778258,0.00035340167,0.0000993493,0.000018476701,0.000009142612,0.00090010883],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985337,0.0002120511,0.00035334018,0.0002723364,0.00031049934,0.00031802646],"domain_scores_gemma":[0.99921733,0.00030136222,0.00006366334,0.00027429973,0.000036079327,0.00010726518],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054260116,0.00014126327,0.00034066048,0.00006277037,0.00010211769,0.000009632879,0.000094790885,0.00019303785,0.00045146706],"category_scores_gemma":[0.00028379878,0.00008283987,0.00007942509,0.00023736258,0.00029359735,0.000047635338,0.00002398533,0.0002658796,0.00004533988],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006915319,0.0019772246,0.92935723,0.00007605441,0.00004888205,0.043010153,0.0011148098,0.0000026718426,0.00045091694,0.007890708,0.007167261,0.008212536],"study_design_scores_gemma":[0.010167818,0.007265358,0.8681624,0.0002021156,0.00028412207,0.037649922,0.007823208,0.00075317576,0.000980304,0.008013269,0.058189224,0.0005090654],"about_ca_topic_score_codex":0.0010479229,"about_ca_topic_score_gemma":0.009865453,"teacher_disagreement_score":0.061194833,"about_ca_system_score_codex":0.00016074204,"about_ca_system_score_gemma":0.0002569776,"threshold_uncertainty_score":0.5505154},"labels":[],"label_agreement":null},{"id":"W1990365009","doi":"10.1080/13693780701449425","title":"DNA and the classical way: Identification of medically important molds in the 21st century","year":2007,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":138,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Identification (biology); Polymerase chain reaction; Computational biology; DNA sequencing; Ancient DNA; Biology; DNA microarray; RAPD; DNA; Computer science; Genetics; Medicine; Gene; Ecology; Population","score_opus":0.016149857015931676,"score_gpt":0.29919130928189214,"score_spread":0.28304145226596045,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990365009","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0006281802,0.9970082,0.000028277886,0.00055781705,0.00030466303,0.0005279411,0.00024051259,0.00000425705,0.00070016],"genre_scores_gemma":[0.003187719,0.9950072,0.00000778448,0.0006379032,0.00040468783,0.000098168544,0.0006076633,0.000015461752,0.000033379893],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99714166,0.00071423175,0.0010051721,0.00039143884,0.00044611868,0.00030136056],"domain_scores_gemma":[0.99847996,0.0005785341,0.0003515975,0.0004006636,0.000035943554,0.0001533087],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025254283,0.00023342228,0.0008125233,0.00007291712,0.00005191092,0.000010924741,0.0006090241,0.0008603206,0.00006044717],"category_scores_gemma":[0.0018311077,0.00011294178,0.0002576702,0.00016834264,0.0009826365,0.000001387367,0.00018795824,0.00045231666,0.000004932098],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014950133,0.00032204142,0.00006573962,0.0018894072,0.00019610714,0.00023320541,0.00005646964,2.8448017e-8,0.0008362128,0.010107423,0.0026301232,0.9835137],"study_design_scores_gemma":[0.000520969,0.00009948327,0.00043571636,0.00037717822,0.00027572183,0.00030800735,0.00006550078,0.000007960692,0.000007997039,0.00008724366,0.99768287,0.00013132322],"about_ca_topic_score_codex":0.000008163531,"about_ca_topic_score_gemma":0.00005531055,"teacher_disagreement_score":0.99505275,"about_ca_system_score_codex":0.000011931149,"about_ca_system_score_gemma":0.00034542053,"threshold_uncertainty_score":0.663558},"labels":[],"label_agreement":null},{"id":"W1990669830","doi":"10.3109/13693786.2012.656717","title":"Invasive<i>Mycoleptodiscus</i>fungal cellulitis and myositis","year":2012,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Cellulitis; Myositis; Biology; Pathology; Medicine; Immunology","score_opus":0.010788682052129971,"score_gpt":0.27648494854405237,"score_spread":0.2656962664919224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990669830","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9759164,0.0023113387,0.00019932266,0.004035773,0.00047186067,0.00027124237,0.000009598752,0.000069742055,0.016714731],"genre_scores_gemma":[0.9922827,0.00060743577,0.00027913865,0.004570909,0.0006462423,0.000027195923,0.00002057502,0.000016796377,0.0015490383],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99820524,0.00013996827,0.00030235166,0.00029026865,0.00044682634,0.0006153123],"domain_scores_gemma":[0.9982526,0.00044972813,0.000047137106,0.00024878533,0.000056887024,0.000944914],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006014985,0.00015838406,0.0004339785,0.000066420536,0.00010289171,0.000007416265,0.000091271024,0.0003430181,0.0063828],"category_scores_gemma":[0.0016082143,0.00012337418,0.00008710922,0.00013339549,0.00052418886,0.00009195259,0.000111410154,0.00041332553,0.00027061865],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018202198,0.00034658553,0.9601732,0.00017028718,0.00005375645,0.00037723873,0.0003894735,8.916483e-9,0.0039900593,0.0036848658,0.017437762,0.013194766],"study_design_scores_gemma":[0.0014751625,0.00045522003,0.94072735,0.00008487156,0.00009768215,0.00087956956,0.00025545515,0.000011570008,0.0021370265,0.00025755283,0.05344203,0.0001764933],"about_ca_topic_score_codex":0.000053839958,"about_ca_topic_score_gemma":0.00011997742,"teacher_disagreement_score":0.03600427,"about_ca_system_score_codex":0.000057629044,"about_ca_system_score_gemma":0.0002288494,"threshold_uncertainty_score":0.9945255},"labels":[],"label_agreement":null},{"id":"W1999886838","doi":"10.1080/13693780701386007","title":"<i>Lecythophora mutabilis</i>prosthetic valve endocarditis in a diabetic patient","year":2007,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of California, San Francisco; Astellas Pharma; University of Alberta","keywords":"Voriconazole; Endocarditis; Amphotericin B; Medicine; Microbiology; Internal medicine; Biology; Antifungal; Dermatology","score_opus":0.00652003328512039,"score_gpt":0.2765844858432612,"score_spread":0.27006445255814077,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999886838","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98910075,0.0008234358,0.00030469953,0.0013635724,0.0004538207,0.0005355951,0.000004284774,0.000055513363,0.0073583117],"genre_scores_gemma":[0.99580586,0.00011045076,0.00022472278,0.0035489283,0.0001498943,0.000041179544,0.000015035861,0.00001974806,0.00008416287],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974064,0.00015409356,0.0006001027,0.00045172006,0.0006734262,0.00071424374],"domain_scores_gemma":[0.9983271,0.00065551116,0.00006231722,0.00037209416,0.00008294565,0.00050006405],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0012352814,0.00017467227,0.00057827926,0.00015916587,0.00004511864,0.0000048451666,0.00012003429,0.00035559788,0.0019154247],"category_scores_gemma":[0.0026752548,0.00014354153,0.00021086255,0.00038137406,0.00046999787,0.00002952478,0.000076702876,0.0006293458,0.0001691908],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00080013636,0.0015046131,0.8361573,0.00022881698,0.000074905874,0.006841413,0.0012244426,9.375987e-7,0.0054090177,0.00072394754,0.0028535817,0.14418085],"study_design_scores_gemma":[0.0025034815,0.0014215279,0.97407186,0.00015840943,0.00006023114,0.00036593812,0.00046080854,0.000045471006,0.002428631,0.0010534133,0.017227238,0.00020297749],"about_ca_topic_score_codex":0.00007996989,"about_ca_topic_score_gemma":0.00037746195,"teacher_disagreement_score":0.14397787,"about_ca_system_score_codex":0.0002096883,"about_ca_system_score_gemma":0.00030729792,"threshold_uncertainty_score":0.998997},"labels":[],"label_agreement":null},{"id":"W2006977936","doi":"10.1080/mmy.39.3.243.251","title":"Quantitative culture of<i>Malassezia</i>species from different body sites of individuals with or without dermatoses","year":2001,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":218,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women's College Hospital; University of Toronto","funders":"","keywords":"Malassezia; Pityriasis; Seborrheic dermatitis; Seborrhoeic dermatitis; Dermatology; Forehead; Scalp; Psoriasis; Medicine; Trunk; Biology; Surgery; Botany","score_opus":0.026664932607547015,"score_gpt":0.3235092789727925,"score_spread":0.2968443463652455,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2006977936","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99612033,0.0011002528,0.00012388079,0.0006222796,0.000058956375,0.00032818396,0.00011732939,0.000028093915,0.0015006838],"genre_scores_gemma":[0.9970847,0.0006742058,0.0010183053,0.00041690137,0.0000623879,0.000034963454,0.00017181957,0.000013440847,0.0005232999],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99848276,0.00009697947,0.00034688215,0.00023508166,0.00060436537,0.00023392125],"domain_scores_gemma":[0.9987976,0.0004328396,0.0001760716,0.00019587988,0.00012104414,0.00027654643],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000052813302,0.00018659933,0.00078366225,0.00008389777,0.00003342507,0.0000038864887,0.00011336627,0.00019381398,0.0029826541],"category_scores_gemma":[0.0004369695,0.00009485602,0.00008793601,0.00016452596,0.00042256483,0.000035987938,0.000056947694,0.00016880664,0.000016261834],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017306975,0.0014461107,0.99007845,0.00008329041,0.0007641017,0.00044290037,0.0006643972,1.6629548e-7,0.0022746022,0.00055558543,0.0016612129,0.0002984765],"study_design_scores_gemma":[0.0065510063,0.0042937114,0.97883785,0.00036059628,0.0008439097,0.00014517645,0.0012792854,0.000065803426,0.003852594,0.00025283516,0.0033833778,0.00013385082],"about_ca_topic_score_codex":0.00010303643,"about_ca_topic_score_gemma":0.00014778189,"teacher_disagreement_score":0.011240605,"about_ca_system_score_codex":0.000024049643,"about_ca_system_score_gemma":0.00017734262,"threshold_uncertainty_score":0.99792874},"labels":[],"label_agreement":null},{"id":"W2010503216","doi":"10.1080/mmy.40.2.209.212","title":"Onychomycosis due to<i>Onychocola canadensis</i>: report of the first two Spanish cases","year":2002,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Dermatology; Geography; Medicine","score_opus":0.019365687180475075,"score_gpt":0.28616965383509424,"score_spread":0.26680396665461914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2010503216","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9520249,0.00042509497,0.000010664923,0.037741814,0.0008140145,0.0008328289,0.000024419316,0.000041269115,0.008084996],"genre_scores_gemma":[0.98885643,0.000048441783,0.00009670866,0.008718939,0.00023566377,0.000108478496,0.000008943669,0.000019862242,0.0019065065],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981922,0.000060887,0.00043148015,0.00033235646,0.0006145381,0.00036857623],"domain_scores_gemma":[0.99830693,0.00029316905,0.00011767993,0.00056634017,0.0001023146,0.0006135584],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00014183122,0.00016045285,0.00047772969,0.00007398768,0.00011004978,0.0000049534215,0.00019141474,0.00015058919,0.006501063],"category_scores_gemma":[0.0019658345,0.00010359111,0.00018138615,0.0003412414,0.00019769397,0.000018022725,0.00011645493,0.0002106019,0.00012539835],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020997747,0.0019714956,0.55441475,0.00010886895,0.00045511403,0.06008664,0.00020277139,0.000002431974,0.00011686091,0.00035183615,0.3704841,0.011595139],"study_design_scores_gemma":[0.00400707,0.0008235411,0.6184439,0.0002452016,0.0005848261,0.019928835,0.000048525122,0.00007619346,0.0005196732,0.00008957781,0.35504317,0.00018946255],"about_ca_topic_score_codex":0.0035951366,"about_ca_topic_score_gemma":0.0075588776,"teacher_disagreement_score":0.064029194,"about_ca_system_score_codex":0.000115032075,"about_ca_system_score_gemma":0.00020788267,"threshold_uncertainty_score":0.9944071},"labels":[],"label_agreement":null},{"id":"W2012531879","doi":"10.3109/13693786.2011.633233","title":"Genetic and phenotypic evaluation of<i>Candida albicans</i>strains isolated from subgingival biofilm of diabetic patients with chronic periodontitis","year":2012,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Candida albicans; Microbiology; Biology; Corpus albicans; Virulence; Genotype; Periodontitis; Chronic periodontitis; Biofilm; Polymerase chain reaction; Gene; Genetics; Bacteria; Medicine; Internal medicine","score_opus":0.010620935286951808,"score_gpt":0.2576829007383082,"score_spread":0.2470619654513564,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012531879","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99647087,0.0022659856,0.00021855987,0.00013711088,0.0001517943,0.0004225255,0.000032026175,0.000011442248,0.00028966588],"genre_scores_gemma":[0.9993283,0.000080248,0.00027708424,0.00009803051,0.00011383283,0.000016181639,0.000057009704,0.000011251253,0.00001802544],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99828166,0.00014490499,0.00034997478,0.00021853931,0.0006984291,0.00030650207],"domain_scores_gemma":[0.9990364,0.00014607434,0.00012391189,0.00021879218,0.00021895289,0.00025589656],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00046811384,0.00012333212,0.00045462503,0.00006346706,0.000033114415,0.0000020713599,0.00007102532,0.00019178947,0.0035778212],"category_scores_gemma":[0.00055965636,0.00009236852,0.00004397664,0.00014196808,0.00056108413,0.00004212058,0.000033260756,0.00017531628,0.000005816263],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022980176,0.00030194208,0.97846895,0.000096211756,0.0000997139,0.0000027260287,0.0002736322,6.368309e-7,0.0037092096,0.000037202502,0.00004469084,0.016735261],"study_design_scores_gemma":[0.0033050398,0.0010540265,0.9938728,0.00011881524,0.00039902085,0.0000033377914,0.000042986194,0.00059409114,0.00038024102,0.0000434137,0.000103730614,0.00008245963],"about_ca_topic_score_codex":0.0002978085,"about_ca_topic_score_gemma":0.00035849438,"teacher_disagreement_score":0.016652802,"about_ca_system_score_codex":0.00009472524,"about_ca_system_score_gemma":0.00045123266,"threshold_uncertainty_score":0.99733305},"labels":[],"label_agreement":null},{"id":"W2014413639","doi":"10.1080/13693780400029247","title":"Intracellular and extracellular growth of<i>Aspergillus fumigatus</i>","year":2005,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"University of British Columbia; Simon Fraser University","keywords":"Aspergillus fumigatus; Extracellular; Microbiology; Biology; A549 cell; Siderophore; Intracellular; Cell culture; Conidium; Cell biology; Biochemistry; Gene","score_opus":0.028555963191806644,"score_gpt":0.33422961108127597,"score_spread":0.3056736478894693,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2014413639","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0004284948,0.9959648,0.00015959766,0.00040982917,0.00029327985,0.0007654386,0.000022421666,0.000050325805,0.0019057974],"genre_scores_gemma":[0.0015650986,0.9953853,0.0004831972,0.0002343238,0.0006238602,0.00004179483,0.0001096407,0.00005731983,0.0014995045],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99645495,0.0003355565,0.0012408285,0.00072049245,0.0007097277,0.0005384326],"domain_scores_gemma":[0.9976205,0.0007120375,0.00032302298,0.0005459683,0.00013457442,0.0006639006],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010733831,0.0004745865,0.0034690402,0.00020606136,0.000057241254,0.000006216368,0.0002791039,0.0016459414,0.0028774817],"category_scores_gemma":[0.0020539083,0.00034428827,0.00052898075,0.0003261491,0.001028441,0.00003472518,0.00017475555,0.0013740236,0.000118194],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006283945,0.00030159543,0.00023997837,0.020947363,0.00024534442,0.0009019139,0.000033664157,3.3638792e-9,0.000028353685,0.0028485109,0.0016137103,0.9727767],"study_design_scores_gemma":[0.00058615074,0.0003590994,0.000112933725,0.005267483,0.0013135695,0.00067708513,0.000012543477,0.0000058743535,0.000011553464,0.000082145205,0.99131376,0.00025780217],"about_ca_topic_score_codex":0.000020890084,"about_ca_topic_score_gemma":0.000021077078,"teacher_disagreement_score":0.9897001,"about_ca_system_score_codex":0.00011188438,"about_ca_system_score_gemma":0.0010298478,"threshold_uncertainty_score":0.99990094},"labels":[],"label_agreement":null},{"id":"W2015315048","doi":"10.1080/13693780600900098","title":"Disseminated phaeohyphomycosis due to<i>Ochroconis gallopavum</i>in the setting of advanced HIV infection","year":2006,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; Mount Sinai Hospital; Public Health Ontario; University of Toronto","funders":"","keywords":"Phaeohyphomycosis; Medicine; Human immunodeficiency virus (HIV); Opportunistic infection; Dermatology; Immunology; Intensive care medicine; Viral disease","score_opus":0.01855441263328753,"score_gpt":0.3603376688688746,"score_spread":0.34178325623558703,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2015315048","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0021746065,0.9873049,0.00011475984,0.0017163131,0.0005969127,0.0019049615,0.00003873275,0.0000701256,0.00607867],"genre_scores_gemma":[0.0037007364,0.99394745,0.00017150214,0.0004717028,0.00035093163,0.0008396023,0.00019549305,0.000040719697,0.0002818501],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9972835,0.0004232261,0.001014628,0.00042118414,0.00042919046,0.00042825638],"domain_scores_gemma":[0.99752754,0.0015997307,0.0002779401,0.00034220525,0.00011719148,0.00013541819],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00096277345,0.00036108677,0.0023000254,0.0004097493,0.000112123904,0.000006927207,0.00019395685,0.0005897971,0.00031206367],"category_scores_gemma":[0.0020391557,0.00022084602,0.00039838458,0.0012212702,0.00018162471,0.000025008354,0.000121782636,0.000971511,0.00005110469],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037091093,0.0006385677,0.001084923,0.010709687,0.00022569894,0.00047770946,0.0002534266,0.0000026333798,0.000015295214,0.00016142336,0.024040563,0.962353],"study_design_scores_gemma":[0.0005332139,0.0005589421,0.0043846257,0.007907114,0.00067465584,0.0010560608,0.00004269474,0.000007801683,0.0000062892104,0.000017168892,0.9846178,0.0001936276],"about_ca_topic_score_codex":0.00032834502,"about_ca_topic_score_gemma":0.0006557466,"teacher_disagreement_score":0.96215934,"about_ca_system_score_codex":0.00018076792,"about_ca_system_score_gemma":0.0002919592,"threshold_uncertainty_score":0.9005839},"labels":[],"label_agreement":null},{"id":"W2016545820","doi":"10.3109/13693786.2010.547880","title":"Prevalent nosocomial clusters among causative agents for candidemia in Hamilton, Canada","year":2011,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Hamilton Regional Laboratory Medicine Program; McMaster University","funders":"","keywords":"Candida parapsilosis; Incidence (geometry); Candida tropicalis; Genotype; Intensive care unit; Medical microbiology; Intensive care; Corpus albicans; Biology; Candida glabrata; Candida albicans; Microbiology; Molecular epidemiology; Medicine; Internal medicine; Intensive care medicine; Genetics; Gene","score_opus":0.03781388086777324,"score_gpt":0.3006554455581472,"score_spread":0.26284156469037395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2016545820","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99435973,0.000063366046,0.00027778052,0.0008958641,0.0005395951,0.00088437623,0.000017992435,0.000015239129,0.0029460497],"genre_scores_gemma":[0.9950414,0.00003882772,0.00016934134,0.0029997244,0.00012500868,0.0001271564,0.000022931456,0.000012736849,0.0014629085],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99829763,0.0001249334,0.0004153196,0.00033410272,0.00037461892,0.00045340817],"domain_scores_gemma":[0.99891496,0.00034568718,0.00007505586,0.00020130085,0.00007734474,0.000385645],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005492724,0.00013726948,0.00044786738,0.000055525146,0.000049785936,0.0000015542539,0.00013601866,0.00027002592,0.0015952573],"category_scores_gemma":[0.0015459006,0.00011154105,0.000068594156,0.00010276306,0.00028634336,0.00002712995,0.000039810948,0.0003483004,0.000006227808],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000975494,0.00017567417,0.9645405,0.00016279948,0.00005665908,0.00044107932,0.0014192736,4.7125437e-7,0.000046192083,0.00011472627,0.030991277,0.0010759023],"study_design_scores_gemma":[0.0026051297,0.00037078062,0.9876458,0.0000981052,0.000049700615,0.000013026281,0.00032920353,0.00028444943,0.00019828363,0.00011713268,0.008175221,0.00011318],"about_ca_topic_score_codex":0.2874741,"about_ca_topic_score_gemma":0.9150376,"teacher_disagreement_score":0.6275635,"about_ca_system_score_codex":0.0005234274,"about_ca_system_score_gemma":0.001489874,"threshold_uncertainty_score":0.9993174},"labels":[],"label_agreement":null},{"id":"W2017582953","doi":"10.3109/13693786.2011.635387","title":"Comment on the paper by Kpodzo<i>et al.</i>","year":2012,"lang":"en","type":"letter","venue":"Medical Mycology","topic":"Advanced Causal Inference Techniques","field":"Mathematics","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"MEDLINE; Political science; Law","score_opus":0.10164081757898306,"score_gpt":0.3981729930860049,"score_spread":0.2965321755070218,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2017582953","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000022865755,0.00012459588,0.003944523,0.98151356,0.00061763905,0.00057614245,0.000053766893,0.00033185814,0.01281507],"genre_scores_gemma":[0.0001677683,0.0002502538,0.0018438887,0.9947284,0.0009470514,0.0005473533,0.00016482225,0.00009387688,0.0012565928],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99640244,0.00090284506,0.00052504236,0.000399078,0.0009904685,0.00078009575],"domain_scores_gemma":[0.98883384,0.009802399,0.0002644955,0.0008884836,0.000053591706,0.00015721303],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.0014863441,0.0004337946,0.00068111677,0.00006007937,0.000092099624,0.000016447615,0.00094215106,0.0013389507,0.014240268],"category_scores_gemma":[0.0030543483,0.00025798197,0.00013601923,0.00008638786,0.00047638797,0.000051259874,0.00032775398,0.005196111,0.0004933312],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000057487496,0.000120430464,0.0000036441463,0.000031744446,0.000049051778,0.000098004915,0.000042698255,3.711598e-9,0.00003859141,0.050438628,0.94849443,0.00067701325],"study_design_scores_gemma":[0.00013460225,0.00018580539,0.0000010915708,0.00009482787,0.000036695532,0.000032925484,0.0000066435787,0.0000018131309,0.0001423317,0.13460274,0.86452156,0.00023895316],"about_ca_topic_score_codex":0.000019427956,"about_ca_topic_score_gemma":0.00000653304,"teacher_disagreement_score":0.08416411,"about_ca_system_score_codex":0.00015660792,"about_ca_system_score_gemma":0.00009412709,"threshold_uncertainty_score":0.99998724},"labels":[],"label_agreement":null},{"id":"W2020910947","doi":"10.3109/13693786.2010.516457","title":"Seasonal variations in the prevalence of<i>Cryptococcus neoformans</i>var.<i>grubii</i>and<i>Cryptococcus gattii</i>in decayed wood inside trunk hollows of diverse tree species in north-western India: a retrospective study","year":2010,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Cryptococcus neoformans; Cryptococcus gattii; Biology; Cryptococcosis; Bark (sound); Cryptococcus; Population; Botany; Veterinary medicine; Ecology; Microbiology","score_opus":0.013891871182224142,"score_gpt":0.2754678395854389,"score_spread":0.2615759684032148,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020910947","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995221,0.000101650876,0.00002514852,0.000819454,0.00034849416,0.0019111694,0.000042319258,0.000016939046,0.0015138076],"genre_scores_gemma":[0.99875635,0.0001650482,0.00011511319,0.0003162274,0.00011961297,0.00044562324,0.0000066738753,0.000013122653,0.00006221813],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99733347,0.00034509308,0.0008441968,0.00041127764,0.0006273063,0.0004386471],"domain_scores_gemma":[0.998251,0.0008819266,0.00021951586,0.00036928107,0.00014125544,0.00013697846],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012669673,0.00024479197,0.0008386982,0.0004619678,0.00008958621,0.000008783817,0.00027360301,0.00026984036,0.0002877371],"category_scores_gemma":[0.0017570988,0.00017529578,0.00009912645,0.0011049026,0.00062903564,0.0001091195,0.00021914106,0.0012952752,0.0000063738275],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002746377,0.0021815253,0.9849286,0.00014436565,0.0000707078,0.00027691017,0.009798833,0.0000024833416,0.00080683996,0.00073079806,0.00008039837,0.0007039169],"study_design_scores_gemma":[0.005166077,0.0015673399,0.990558,0.00008223826,0.00012190117,0.000064466236,0.0016834986,0.00007429689,0.00004608626,0.00019712598,0.00030155003,0.00013740506],"about_ca_topic_score_codex":0.0005788801,"about_ca_topic_score_gemma":0.059135288,"teacher_disagreement_score":0.058556408,"about_ca_system_score_codex":0.000092703995,"about_ca_system_score_gemma":0.0002874423,"threshold_uncertainty_score":0.958033},"labels":[],"label_agreement":null},{"id":"W2050257859","doi":"10.1080/1369378031000160444","title":"First Italian report of onychomycosis caused by<i>Onychocola canadensis</i>","year":2003,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Temperate climate; Fungus; Geography; Biology; Ecology; Botany","score_opus":0.010369650890801652,"score_gpt":0.27676216096896045,"score_spread":0.2663925100781588,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2050257859","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96261954,0.001140514,0.00007903285,0.008708542,0.00076949893,0.00081909786,0.00005970651,0.000057154633,0.025746884],"genre_scores_gemma":[0.99395776,0.00013191655,0.00014617687,0.002058632,0.000060050887,0.000086067346,0.00007012549,0.000023550392,0.003465742],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981555,0.00008060828,0.000481628,0.0003441742,0.0005532812,0.00038485933],"domain_scores_gemma":[0.99841905,0.00018161899,0.00013432084,0.00039492242,0.00009804401,0.00077201956],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00022393951,0.00016856976,0.0005245616,0.00008324865,0.000063368665,0.000003435073,0.00009142653,0.00026720826,0.0064229644],"category_scores_gemma":[0.0015553756,0.00013673835,0.00014338305,0.00023468035,0.00020114511,0.000022219378,0.000023613973,0.00018742407,0.00008238845],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018295036,0.0024148163,0.5339581,0.00022038982,0.0007408891,0.017190136,0.00009152364,5.077303e-7,0.0005867001,0.001109192,0.4421265,0.0013782918],"study_design_scores_gemma":[0.0073489314,0.0010935382,0.1693928,0.00017776928,0.00068562326,0.0024511048,0.00008541256,0.000018055545,0.0021112622,0.00032179948,0.8160481,0.00026560592],"about_ca_topic_score_codex":0.0011145299,"about_ca_topic_score_gemma":0.0010046493,"teacher_disagreement_score":0.3739216,"about_ca_system_score_codex":0.00012603642,"about_ca_system_score_gemma":0.0005833236,"threshold_uncertainty_score":0.9944853},"labels":[],"label_agreement":null},{"id":"W2051936868","doi":"10.1080/mmy.40.5.529.534","title":"Alternate week and combination itraconazole and terbinafine therapy for chromoblastomycosis caused by<i>Fonsecaea pedrosoi</i>in Brazil","year":2002,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":106,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women's College Hospital; University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Chromoblastomycosis; Terbinafine; Itraconazole; Medicine; Mycosis; Amphotericin B; Surgery; Dermatology; Antifungal","score_opus":0.01801881734124484,"score_gpt":0.2845143710011522,"score_spread":0.26649555365990735,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2051936868","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9780595,0.00448174,0.00009031233,0.015835868,0.00019658938,0.0004565776,0.000013854302,0.000035200042,0.0008303748],"genre_scores_gemma":[0.99118364,0.005375378,0.0000526453,0.00228276,0.00007965879,0.00015750455,0.000013010846,0.000014283813,0.0008411218],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990533,0.00004970891,0.00023935786,0.0002567674,0.00014772007,0.00025314096],"domain_scores_gemma":[0.99927187,0.00039709275,0.000044152075,0.000085797794,0.000047509024,0.00015356406],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023725975,0.0001309087,0.00034867832,0.0001088744,0.000105566935,0.000009800578,0.000037593327,0.00015683268,0.00043852706],"category_scores_gemma":[0.00025116568,0.000106401545,0.000034215947,0.00010536611,0.00023151844,0.000040818697,0.000032121097,0.00020369691,0.000007302938],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014805788,0.010485802,0.3814634,0.0008709773,0.00084492145,0.0006066932,0.0036576767,0.0000016704794,0.11356611,0.0047788564,0.19256483,0.28967848],"study_design_scores_gemma":[0.05124097,0.01710391,0.66032135,0.00032005028,0.00019961542,0.0010927214,0.00025952747,0.014550455,0.006402179,0.002014989,0.2457355,0.0007587332],"about_ca_topic_score_codex":0.0000997747,"about_ca_topic_score_gemma":0.00012264759,"teacher_disagreement_score":0.28891975,"about_ca_system_score_codex":0.000033549426,"about_ca_system_score_gemma":0.000018026769,"threshold_uncertainty_score":0.4801564},"labels":[],"label_agreement":null},{"id":"W2055859982","doi":"10.1080/13693780500165461","title":"Pathogenicity of the<i>Chrysosporium</i>Anamorph of<i>Nannizziopsis vriesii</i>for veiled chameleons (<i>Chamaeleo calyptratus</i>)","year":2005,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":77,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Morris Animal Foundation","keywords":"Biology; Hypha; Conidium; Dermis; Chrysosporium; Fungus; Epidermis (zoology); Dermatomycosis; Microbiology; Botany; Anatomy","score_opus":0.006856623993839525,"score_gpt":0.2711106734912151,"score_spread":0.2642540494973756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2055859982","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98962176,0.0016744132,0.00034194282,0.0057340404,0.00044365274,0.0009538908,0.00023490022,0.0000413187,0.0009541065],"genre_scores_gemma":[0.9958516,0.00023042384,0.00088477146,0.0020516925,0.00032368378,0.00011307253,0.000044098753,0.000027820677,0.00047285063],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99778163,0.00010727557,0.0006784211,0.0003496293,0.000615459,0.0004676078],"domain_scores_gemma":[0.9981494,0.00037478644,0.00025816826,0.00054856046,0.00024987877,0.0004192035],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00033471186,0.00022722631,0.00080678053,0.00008945719,0.00008430059,0.0000025267352,0.00028089967,0.00033875433,0.0010986694],"category_scores_gemma":[0.0011857115,0.00015165156,0.00045531694,0.0003642581,0.0005045139,0.000034255616,0.00010539607,0.0002546801,0.0000148459185],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005297233,0.01258059,0.79710776,0.0016224831,0.0029204332,0.00047201363,0.0013475462,0.00002539495,0.04297215,0.011104427,0.048431605,0.076118395],"study_design_scores_gemma":[0.022832531,0.0035664346,0.7979097,0.00047915816,0.0028569545,0.0003965146,0.000215088,0.00081986276,0.042226568,0.0011364236,0.12694575,0.00061506074],"about_ca_topic_score_codex":0.000085728956,"about_ca_topic_score_gemma":0.00010592748,"teacher_disagreement_score":0.07851414,"about_ca_system_score_codex":0.0000771623,"about_ca_system_score_gemma":0.0007086822,"threshold_uncertainty_score":0.99981445},"labels":[],"label_agreement":null},{"id":"W2057196461","doi":"10.1080/13693780400008191","title":"Attempted isolation of<i>Blastomyces dermatitidis</i>from native shrews in northern Wisconsin, USA","year":2005,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St Joseph's Health Centre; McMaster University; University of Toronto","funders":"","keywords":"Blastomyces dermatitidis; Peromyscus; Biology; Blastomyces; Blastomycosis; Microtus; Histoplasma capsulatum; Dimorphic fungus; Zoology; Sloth; Sigmodon hispidus; Shrew; Ecology; Histoplasmosis; Yeast","score_opus":0.013361676872944324,"score_gpt":0.28703279291028017,"score_spread":0.27367111603733585,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057196461","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9835831,0.00047965528,0.0004012593,0.008096093,0.00018843151,0.00019198487,0.000008478193,0.000023000961,0.007028026],"genre_scores_gemma":[0.997381,0.00013504445,0.00071743986,0.0013675012,0.00022335959,0.000026941285,0.00001941244,0.00000787363,0.000121448524],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99890506,0.00010241193,0.00039742354,0.00017712433,0.00023343338,0.00018455449],"domain_scores_gemma":[0.99911255,0.0004856315,0.000086403714,0.000113892704,0.000103231025,0.00009828001],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00018432419,0.000106084015,0.0003922957,0.00014830797,0.000046272657,0.0000024152516,0.000053858068,0.0001691844,0.0014148757],"category_scores_gemma":[0.00074315444,0.0000840551,0.000055615557,0.00023107081,0.00026217196,0.00005606168,0.00004472245,0.0002697935,0.000108262255],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000109100336,0.00042464584,0.98427844,0.000030314279,0.00011468167,0.000053235497,0.0013387633,0.000017785655,0.0023300601,0.00027883874,0.0030922587,0.007931897],"study_design_scores_gemma":[0.002334011,0.00044440746,0.9694815,0.00016124015,0.00006313991,0.00006619716,0.00035960088,0.002111217,0.0015723212,0.00026398827,0.023009086,0.00013323833],"about_ca_topic_score_codex":0.0005957758,"about_ca_topic_score_gemma":0.02599806,"teacher_disagreement_score":0.025402283,"about_ca_system_score_codex":0.00008055594,"about_ca_system_score_gemma":0.00013823035,"threshold_uncertainty_score":0.99949795},"labels":[],"label_agreement":null},{"id":"W2061057386","doi":"10.1080/13693780600860946","title":"Distribution of<i>Cryptococcus gattii</i>and<i>Cryptococcus neoformans</i>in decayed trunk wood of<i>Syzygium cumini</i>trees in north-western India","year":2006,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Department of Science and Technology, Ministry of Science and Technology, India; Indian National Science Academy","keywords":"Syzygium; Cryptococcus neoformans; Veterinary medicine; Biology; Cryptococcus gattii; Uttar pradesh; Bark (sound); Horticulture; Botany; Medicine; Microbiology; Ecology","score_opus":0.007092465784608415,"score_gpt":0.25453134535701105,"score_spread":0.24743887957240263,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2061057386","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99613595,0.000633797,0.0002252195,0.0006651132,0.00034490894,0.00070621516,0.00004714691,0.000031665066,0.0012099636],"genre_scores_gemma":[0.9988675,0.00028102836,0.000083104664,0.0002344222,0.00017577835,0.00017117808,0.00012880885,0.00001585532,0.00004231372],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9976665,0.00013236816,0.0009835827,0.0003328707,0.00037803332,0.0005066519],"domain_scores_gemma":[0.99885523,0.0004589694,0.00018950333,0.00023478121,0.00010564056,0.00015587626],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046538038,0.00023653594,0.00091947167,0.00029785442,0.000050521947,0.0000046322025,0.0001232804,0.0003629127,0.00011338488],"category_scores_gemma":[0.0003693483,0.00019768202,0.000111585236,0.0007098393,0.00053718564,0.00006919294,0.00012632812,0.0005062008,0.000011628005],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002983689,0.000773664,0.9929356,0.00015946061,0.000044351927,0.00015927368,0.0002592015,0.000014275781,0.0013900341,0.00093779585,0.00072002906,0.0023079573],"study_design_scores_gemma":[0.0038839604,0.00085968355,0.98615557,0.00016590486,0.000060292947,0.00008247676,0.000102638114,0.00007987686,0.0010021344,0.000201314,0.007249864,0.00015625845],"about_ca_topic_score_codex":0.00091536075,"about_ca_topic_score_gemma":0.008043359,"teacher_disagreement_score":0.0071279984,"about_ca_system_score_codex":0.00009054672,"about_ca_system_score_gemma":0.00017920986,"threshold_uncertainty_score":0.8061239},"labels":[],"label_agreement":null},{"id":"W2066381032","doi":"10.1080/13693780400019990","title":"Long-term antifungal prophylaxis in high-risk hematopoietic stem cell transplant recipients","year":2005,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Aspergillosis; Voriconazole; Posaconazole; Immunosuppression; Micafungin; Medicine; Azole; Echinocandin; Itraconazole; Hematopoietic stem cell transplantation; Internal medicine; Transplantation; Immunology; Fluconazole; Antifungal; Dermatology","score_opus":0.026158646663571386,"score_gpt":0.32091418211527417,"score_spread":0.2947555354517028,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066381032","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.089627005,0.9067722,0.00006754944,0.00010815954,0.00092497934,0.0018220401,0.00009830174,0.0000822508,0.00049750466],"genre_scores_gemma":[0.14516692,0.8522351,0.000044122102,0.00013666677,0.00049492985,0.00016256182,0.00023053405,0.000078943776,0.0014502143],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99379426,0.00095209194,0.001830451,0.0012493697,0.0011481142,0.0010257312],"domain_scores_gemma":[0.9970213,0.000814509,0.000447083,0.0008996334,0.0000753637,0.00074210885],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity","insufficient_payload"],"category_scores_codex":[0.001416259,0.0007335173,0.0041955183,0.00042942827,0.00008882248,0.000015143502,0.0005718781,0.00226816,0.0033717433],"category_scores_gemma":[0.00023481465,0.00052633276,0.00072133663,0.0006233509,0.00049164623,0.00005038219,0.000120327546,0.0030480844,0.0007920383],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021781419,0.0012454983,0.058668613,0.022136444,0.00012953064,0.0042084674,0.00016394984,5.037587e-8,0.0000014326833,0.000032409123,0.00043572462,0.9127601],"study_design_scores_gemma":[0.0096533755,0.0053915107,0.16614589,0.08812684,0.005541672,0.0025766722,0.00006531483,0.000012805205,0.000021981705,0.00006209429,0.7199249,0.0024768896],"about_ca_topic_score_codex":0.000057123467,"about_ca_topic_score_gemma":0.00038952476,"teacher_disagreement_score":0.91028315,"about_ca_system_score_codex":0.00048569197,"about_ca_system_score_gemma":0.0014601918,"threshold_uncertainty_score":0.99998593},"labels":[],"label_agreement":null},{"id":"W2076418264","doi":"10.1093/mmy/myu040","title":"Effective method for the heat inactivation of Blastomyces dermatitidis","year":2014,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; Mount Sinai Hospital; Toronto Public Health; University of Toronto; Public Health Ontario","funders":"","keywords":"Blastomyces; Blastomyces dermatitidis; Microbiology; Biology; Blastomycosis; Chemistry; Immunology","score_opus":0.008626408888264863,"score_gpt":0.33232893654875156,"score_spread":0.3237025276604867,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076418264","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.24992192,0.000444725,0.7082224,0.031254932,0.00090067065,0.0014635988,0.0000050724802,0.00005875663,0.007727917],"genre_scores_gemma":[0.994991,0.0000488054,0.0028465905,0.0014924565,0.00025082094,0.00028315617,0.0000032843534,0.000005971881,0.00007793847],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9993514,0.00013682383,0.00016035559,0.00009916019,0.00013505951,0.00011724516],"domain_scores_gemma":[0.9947715,0.0049328506,0.000034813584,0.00010004632,0.00011062037,0.00005019093],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00064837426,0.00006188655,0.00025871152,0.00004871088,0.00010038659,0.0000016076848,0.000042906035,0.000098697674,0.00015781885],"category_scores_gemma":[0.003689837,0.00003423682,0.000068920854,0.00010599358,0.0001531892,0.000015489517,0.000027905398,0.00012995017,0.000005632709],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015994515,0.0014946689,0.050811518,0.0016154074,0.0020512454,0.00001177544,0.0034105845,0.0001278817,0.054865155,0.07923853,0.07751405,0.72725976],"study_design_scores_gemma":[0.0066969967,0.007546484,0.5141524,0.00025172983,0.00076034735,0.00030113856,0.0008257276,0.065256126,0.062372897,0.0053929947,0.33619288,0.00025026605],"about_ca_topic_score_codex":0.0001417386,"about_ca_topic_score_gemma":0.000043377,"teacher_disagreement_score":0.745069,"about_ca_system_score_codex":0.000026361953,"about_ca_system_score_gemma":0.000033607223,"threshold_uncertainty_score":0.4417346},"labels":[],"label_agreement":null},{"id":"W2082480414","doi":"10.1080/1369378031000137350","title":"<i>Stachybotrys chartarum</i>: cause of human disease or media darling?","year":2003,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Indoor Air Quality and Microbial Exposure","field":"Environmental Science","cited_by":85,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Saint Mary's University; Carleton University; St. Mary's University; Natural Sciences and Engineering Research Council of Canada","funders":"","keywords":"Fungus; Disease; Biology; Asthma; Microbiology; Human disease; Medicine; Immunology; Pathology; Botany","score_opus":0.054601457622997646,"score_gpt":0.34710589091305943,"score_spread":0.2925044332900618,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082480414","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0003507503,0.992894,0.000036901307,0.00021675501,0.0014521171,0.0009630326,0.0002528208,0.00006546989,0.0037681349],"genre_scores_gemma":[0.00016675175,0.99624795,0.000075237316,0.001156046,0.00026669688,0.0000866541,0.00028432868,0.000056532313,0.0016598338],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9959685,0.00090040296,0.0011337975,0.0006569938,0.0007103744,0.0006299143],"domain_scores_gemma":[0.99762356,0.00058367226,0.00043537226,0.0006001918,0.000013001009,0.00074418023],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0010639249,0.0004510143,0.0018485356,0.00008324041,0.0001436561,0.0000090746,0.0008655405,0.0009401249,0.048064504],"category_scores_gemma":[0.001231236,0.00032039074,0.00039824776,0.00036181003,0.0011486139,0.0000545938,0.00040108958,0.0009063337,0.0010716992],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011356958,0.0017336871,0.00029488042,0.018702352,0.00041140418,0.0032812369,0.0008808949,0.0000014698334,0.000063197964,0.0026597073,0.11276241,0.8590952],"study_design_scores_gemma":[0.00037597318,0.00014757445,0.000026582262,0.0013161316,0.00049730303,0.000089740264,0.000009844307,6.7218366e-7,0.0000049379546,0.000108028165,0.997079,0.00034418164],"about_ca_topic_score_codex":0.00012432723,"about_ca_topic_score_gemma":0.00045537637,"teacher_disagreement_score":0.8843166,"about_ca_system_score_codex":0.00018239305,"about_ca_system_score_gemma":0.00047815315,"threshold_uncertainty_score":0.99992484},"labels":[],"label_agreement":null},{"id":"W2083546091","doi":"10.3109/13693786.2011.633106","title":"Fungal myelitis caused by<i>Phialosimplex</i>caninus in an immunosuppressed dog","year":2012,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Infectious Diseases and Mycology","field":"Veterinary","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Pathology; Prednisone; Bone marrow; Itraconazole; Medicine; Amphotericin B; Anemia; Biology; Internal medicine; Antifungal; Dermatology","score_opus":0.025822547693892074,"score_gpt":0.3411225227923885,"score_spread":0.31529997509849644,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083546091","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99113536,0.0007696575,0.000049111903,0.0008246033,0.0020273041,0.0003573983,0.00009575003,0.0001671961,0.0045736213],"genre_scores_gemma":[0.99448156,0.00006593735,0.000027660708,0.003939607,0.00094178156,0.00022052087,0.00016391564,0.000046670317,0.0001123655],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.996685,0.0007779034,0.0005332495,0.00040196846,0.00034818405,0.0012536454],"domain_scores_gemma":[0.9982516,0.00046959633,0.000101771446,0.00040706233,0.000053952568,0.0007159786],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00065300794,0.00026433458,0.0005183607,0.00016415722,0.00012580707,0.000017671196,0.00038454225,0.0006663502,0.020805342],"category_scores_gemma":[0.0005173821,0.0002523837,0.00010352696,0.00022433636,0.00027752473,0.00022378603,0.00020342728,0.00058682787,0.0005303628],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015404067,0.005820874,0.7176306,0.00015493696,0.00026224082,0.0051338742,0.0022560302,0.0000022897993,0.069821425,0.009710111,0.17339255,0.014274635],"study_design_scores_gemma":[0.004380716,0.0034661489,0.8244155,0.000022308624,0.000081132006,0.0014241054,0.00017004271,0.00013445703,0.00031245966,0.0006190142,0.16439539,0.0005786884],"about_ca_topic_score_codex":0.0010848435,"about_ca_topic_score_gemma":0.00048445203,"teacher_disagreement_score":0.10678491,"about_ca_system_score_codex":0.0001686941,"about_ca_system_score_gemma":0.00020043844,"threshold_uncertainty_score":0.99999285},"labels":[],"label_agreement":null},{"id":"W2083602916","doi":"10.1080/13693780310001624556","title":"Antifungal susceptibility of 50<i>Candida</i>isolates from invasive mycoses in Chile","year":2004,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Itraconazole; Fluconazole; Microbiology; Biology; Amphotericin B; Candida glabrata; Azole; Candida parapsilosis; Mycosis; Antifungal; Immunology","score_opus":0.011568049288720558,"score_gpt":0.27848493243073924,"score_spread":0.26691688314201867,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083602916","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942771,0.0010242239,0.000171011,0.0017845774,0.0002704144,0.00042721946,0.00004604728,0.00004939754,0.0019500044],"genre_scores_gemma":[0.9976463,0.00035180995,0.0005477699,0.0011246462,0.00016799028,0.000017869821,0.00006914089,0.00001813508,0.00005638238],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997516,0.0001642512,0.00075886294,0.0005767481,0.0005014643,0.00048269038],"domain_scores_gemma":[0.998065,0.00083532237,0.00013396914,0.0004996271,0.000116974494,0.00034908764],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006478275,0.00021731124,0.0008897099,0.00014091839,0.000048000293,0.0000049329724,0.00023483667,0.0004762769,0.004122467],"category_scores_gemma":[0.0041869413,0.00017769067,0.00017054529,0.0003266395,0.00079540105,0.00007399883,0.00011560339,0.0006303684,0.00009147769],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009792378,0.0012007327,0.9505377,0.00015307059,0.000071119,0.00027252448,0.0004475528,0.000004126752,0.044128712,0.00047887609,0.0004131816,0.0013131917],"study_design_scores_gemma":[0.0038679307,0.00087022845,0.96984845,0.00033266196,0.00006174453,0.000027214423,0.00031511133,0.000014082068,0.019211268,0.004879685,0.0004128085,0.00015878605],"about_ca_topic_score_codex":0.0029017823,"about_ca_topic_score_gemma":0.014881621,"teacher_disagreement_score":0.024917444,"about_ca_system_score_codex":0.00017945479,"about_ca_system_score_gemma":0.0010909138,"threshold_uncertainty_score":0.9967879},"labels":[],"label_agreement":null},{"id":"W2093895395","doi":"10.3109/13693786.2013.795664","title":"Thymol antifungal mode of action involves telomerase inhibition","year":2013,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"Guangdong Academy of Sciences; Natural Sciences and Engineering Research Council of Canada","keywords":"Thymol; Telomere; Saccharomyces cerevisiae; Telomerase; Biology; Molecular biology; Mutant; Transcription (linguistics); Biochemistry; Mode of action; Telomerase reverse transcriptase; Gene; Yeast; Growth inhibition; Chemistry; Cell growth; Food science; Essential oil","score_opus":0.010923435900270869,"score_gpt":0.2665554128651982,"score_spread":0.2556319769649273,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2093895395","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99242127,0.00017553501,0.005566939,0.00076273986,0.00046097286,0.00018938856,0.0000068257195,0.000015708463,0.0004006186],"genre_scores_gemma":[0.9973054,0.00031618585,0.0007156489,0.00089033606,0.0003229111,0.000032492982,0.00010703858,0.000016475638,0.0002935419],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988972,0.00010527487,0.00026900566,0.00026685875,0.00021969726,0.00024197302],"domain_scores_gemma":[0.9993929,0.000024831963,0.00008675801,0.00023398951,0.00010739544,0.00015407162],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00014776137,0.00012389883,0.00018655068,0.000057972702,0.00004960229,0.000008061592,0.00013850663,0.00037225022,0.000960909],"category_scores_gemma":[0.00027255982,0.00011387665,0.000064275875,0.00006358306,0.00024157239,0.000005209211,0.00010870381,0.00015144474,0.000066432185],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022070852,0.0001520312,0.0041837506,0.000037847993,0.000031940053,0.0000044029657,0.00012648964,0.00003219363,0.9821872,0.00010230042,0.009188324,0.003931456],"study_design_scores_gemma":[0.00082483055,0.00060807157,0.019016318,0.000017944538,0.000026795726,0.000053403408,0.00013266655,0.000923115,0.9723449,0.001167012,0.004668254,0.00021669545],"about_ca_topic_score_codex":0.0002282437,"about_ca_topic_score_gemma":0.00010651647,"teacher_disagreement_score":0.014832568,"about_ca_system_score_codex":0.0000109743605,"about_ca_system_score_gemma":0.00010693091,"threshold_uncertainty_score":0.9999524},"labels":[],"label_agreement":null},{"id":"W2096308348","doi":"10.3109/13693786.2012.738312","title":"Global burden of allergic bronchopulmonary aspergillosis with asthma and its complication chronic pulmonary aspergillosis in adults","year":2012,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":489,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; University of Toronto","funders":"National Institutes of Health; University of Delhi","keywords":"Allergic bronchopulmonary aspergillosis; Medicine; Asthma; Aspergillosis; Population; Pediatrics; Intensive care medicine; Immunology; Environmental health","score_opus":0.010153552697364971,"score_gpt":0.271582252729649,"score_spread":0.261428700032284,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2096308348","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98456514,0.0079515325,0.000037337773,0.0026159198,0.00008587378,0.00045033568,0.000014514617,0.000031741805,0.0042475997],"genre_scores_gemma":[0.99786854,0.0012203836,0.0001457703,0.00029413687,0.00026130065,0.000048930935,0.000046137913,0.000015465417,0.00009931344],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979349,0.00014085196,0.0004684115,0.00040118425,0.0005401881,0.00051446987],"domain_scores_gemma":[0.9988846,0.00016017363,0.000112549744,0.00028510016,0.00010456788,0.00045296585],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00043862555,0.00020253148,0.00058254594,0.00009153724,0.00004781901,0.0000022519775,0.00014436051,0.000355992,0.0009605733],"category_scores_gemma":[0.00029716006,0.00015569034,0.0000666283,0.00037970324,0.00035327984,0.00011120815,0.000103739854,0.00028448086,0.000028714348],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020275025,0.0007742328,0.9756026,0.00055621,0.00007727393,0.00014449788,0.00019915162,0.0000072116,0.0016039559,0.001310006,0.00020730542,0.017490007],"study_design_scores_gemma":[0.0016750107,0.00086583686,0.99279165,0.00043164482,0.000044355522,0.00037794426,0.0001892055,0.0018356137,0.000099313635,0.000056839235,0.001482721,0.00014987499],"about_ca_topic_score_codex":0.00032310685,"about_ca_topic_score_gemma":0.0003718952,"teacher_disagreement_score":0.017340131,"about_ca_system_score_codex":0.00028178561,"about_ca_system_score_gemma":0.00023340451,"threshold_uncertainty_score":0.9999527},"labels":[],"label_agreement":null},{"id":"W2100722163","doi":"10.3109/13693786.2013.813086","title":"Isolation, expression and characterization of a minor allergen from<i>Penicillium crustosum</i>","year":2013,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Allergic Rhinitis and Sensitization","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada","funders":"","keywords":"Allergen; Penicillium; Escherichia coli; Biology; Molecular biology; Epitope; Complementary DNA; Peptide sequence; Microbiology; Chemistry; Antibody; Biochemistry; Allergy; Genetics; Immunology; Gene","score_opus":0.009216110607097988,"score_gpt":0.2314212953456165,"score_spread":0.22220518473851852,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2100722163","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99069613,0.0000869765,0.003987282,0.0036423209,0.00021774069,0.000294526,0.000005591734,0.000026275027,0.001043169],"genre_scores_gemma":[0.9961388,0.00032466513,0.0009879547,0.001660513,0.00021677549,0.00002304962,0.00026889137,0.000011683427,0.00036763493],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989953,0.00007498123,0.00034224277,0.00019093396,0.00026024363,0.00013628896],"domain_scores_gemma":[0.9993169,0.000112305344,0.00011531872,0.00012829248,0.00014696713,0.00018024533],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00010019704,0.00008985911,0.00028514257,0.000059698923,0.000037005942,0.000005014111,0.000044241537,0.00025178125,0.006709066],"category_scores_gemma":[0.00029757584,0.000070961076,0.00002918513,0.0000740942,0.000107846136,0.000074776515,0.00004497583,0.00011521266,0.000052840165],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009809194,0.0001358638,0.016793745,0.00003352708,0.000038061713,0.000020550751,0.0007132674,3.0811256e-7,0.9716948,0.00014465301,0.0038417692,0.00648533],"study_design_scores_gemma":[0.0033788458,0.0005325101,0.9553004,0.00022130972,0.00007178644,0.00010339764,0.00018314968,0.010200188,0.018317427,0.00049416616,0.010990952,0.00020585117],"about_ca_topic_score_codex":0.000145192,"about_ca_topic_score_gemma":0.000011082543,"teacher_disagreement_score":0.9533774,"about_ca_system_score_codex":0.000013091783,"about_ca_system_score_gemma":0.000063254854,"threshold_uncertainty_score":0.9941989},"labels":[],"label_agreement":null},{"id":"W2104026708","doi":"10.3109/13693786.2010.547994","title":"Blastomycosis in children and adolescents: a 30-year experience from Manitoba","year":2011,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Saskatchewan; University of Manitoba","funders":"Northwestern University","keywords":"Blastomycosis; Medicine; Blastomyces dermatitidis; Disease; Pediatrics; Retrospective cohort study; Medical record; Amphotericin B; Dermatology; Surgery; Internal medicine; Antifungal","score_opus":0.014759684184118712,"score_gpt":0.2512059576839062,"score_spread":0.23644627349978747,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2104026708","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99744827,0.00030947584,0.00003192814,0.00025562837,0.00016275464,0.00015911796,0.000004007995,0.000030869083,0.0015979259],"genre_scores_gemma":[0.9982857,0.00036568686,0.00020217603,0.0009476808,0.0001293854,0.00003967535,0.0000034496206,0.0000070845517,0.000019171703],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992259,0.00004262241,0.00017359783,0.00021999177,0.00014127152,0.00019660678],"domain_scores_gemma":[0.9996384,0.0000447959,0.00002251874,0.000114660346,0.000021589858,0.00015807536],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000087057975,0.000088215966,0.00024236426,0.00007673768,0.000041171406,0.0000024891033,0.0000571203,0.00014333174,0.0022807978],"category_scores_gemma":[0.0003151809,0.000069473725,0.00002535087,0.000101362835,0.00024593616,0.0000237624,0.00009284423,0.00024173196,0.00009189384],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006501601,0.00024569267,0.99547887,0.000006282594,0.00002981583,0.000060388244,0.00095213717,7.0396236e-9,0.000090556496,0.0000843749,0.00064241287,0.0023444449],"study_design_scores_gemma":[0.0012458398,0.0002788779,0.9970755,0.00009302815,0.000022654183,0.000069249305,0.00048189913,0.0000125726,0.000103260645,0.00010818322,0.00044442352,0.0000645113],"about_ca_topic_score_codex":0.0022854062,"about_ca_topic_score_gemma":0.00052458164,"teacher_disagreement_score":0.0022799338,"about_ca_system_score_codex":0.000030561347,"about_ca_system_score_gemma":0.000028814646,"threshold_uncertainty_score":0.99863124},"labels":[],"label_agreement":null},{"id":"W2104044474","doi":"10.1080/mmy.40.2.201.208","title":"Fungicidal activities of commonly used disinfectants and antifungal pharmaceutical spray preparations against clinical strains of<i>Aspergillus</i>and<i>Candida</i>species","year":2002,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antimicrobial agents and applications","field":"Chemistry","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; University of Toronto; Ministry of Health and Long Term Care; Mediprobe Research (Canada); Sunnybrook Health Science Centre","funders":"","keywords":"Microbiology; Aspergillus ochraceus; Chemistry; Benzalkonium chloride; Disinfectant; Biology; Food science; Ochratoxin A; Organic chemistry; Mycotoxin","score_opus":0.043285117209877405,"score_gpt":0.32146699472638607,"score_spread":0.2781818775165087,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2104044474","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98798364,0.00023849095,0.00019611458,0.0010928911,0.00009097775,0.00011586046,0.00023187495,0.00003624084,0.010013925],"genre_scores_gemma":[0.9977056,0.0011919794,0.00015110744,0.00030041687,0.00015330892,0.000011926497,0.000029786266,0.000014186423,0.00044168823],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984521,0.000087567176,0.0006387705,0.00030361864,0.0002474794,0.00027044336],"domain_scores_gemma":[0.9986158,0.0007134085,0.00017632935,0.00020517674,0.000040814495,0.00024849805],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00023480874,0.00016448511,0.0005134809,0.000045048702,0.00012286438,0.000012463861,0.00017605409,0.0002974454,0.0039942698],"category_scores_gemma":[0.0002574636,0.00014118194,0.00009637265,0.00010378832,0.0016216752,0.000060819777,0.00016010561,0.00037238628,0.0000062679255],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013246485,0.0029050978,0.2092797,0.00036741653,0.00044305646,0.00005728617,0.0012744025,0.000005113237,0.7398114,0.013797889,0.010248607,0.021677561],"study_design_scores_gemma":[0.018102385,0.0014460607,0.23792575,0.00070161343,0.0012340922,0.00052981725,0.002163821,0.0128521295,0.36775613,0.00062673405,0.35443553,0.0022259247],"about_ca_topic_score_codex":0.000011458283,"about_ca_topic_score_gemma":0.00005265941,"teacher_disagreement_score":0.3720553,"about_ca_system_score_codex":0.0000125121005,"about_ca_system_score_gemma":0.000056454188,"threshold_uncertainty_score":0.99691623},"labels":[],"label_agreement":null},{"id":"W2105033070","doi":"10.1080/13693780701299333","title":"<i>Candida albicans</i>Als proteins mediate aggregation with bacteria and yeasts","year":2007,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":124,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Center for Research Resources; National Institute of General Medical Sciences; National Institutes of Health; U.S. Department of Veterans Affairs","keywords":"Candida albicans; Microbiology; Biofilm; Bacterial adhesin; Yeast; Corpus albicans; Bacteria; Biology; Saccharomyces cerevisiae; Chemistry; Virulence; Biochemistry; Gene; Genetics","score_opus":0.007528773816860386,"score_gpt":0.26895214852934646,"score_spread":0.26142337471248606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2105033070","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9909364,0.00020136833,0.002076364,0.0029405034,0.00012953716,0.00047036752,0.0000038010376,0.000051393326,0.0031902536],"genre_scores_gemma":[0.99604,0.00010383903,0.0010174098,0.001866253,0.00026726437,0.00002167334,0.0000233806,0.000014198683,0.0006459698],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998521,0.000062958294,0.00028302462,0.00030953143,0.00045360034,0.0003699147],"domain_scores_gemma":[0.9989496,0.00021611628,0.00007152798,0.00019579227,0.00008429736,0.00048265327],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00090762204,0.00013055942,0.00034682357,0.0000685449,0.0000614958,0.000006731803,0.000066454675,0.00024534354,0.0017873317],"category_scores_gemma":[0.0008484586,0.00008868454,0.000030667565,0.00015696658,0.00046791648,0.000046414927,0.000034093566,0.0002876669,0.000034328772],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0049017984,0.00053116644,0.82456946,0.00037195144,0.00015582818,0.0019269214,0.0006817213,8.194331e-8,0.03673779,0.0013891914,0.0020014374,0.12673266],"study_design_scores_gemma":[0.0024337417,0.001129998,0.97372705,0.00016911239,0.000063500636,0.0002640858,0.00012053785,0.000019102505,0.003053796,0.00020043965,0.01868038,0.00013827396],"about_ca_topic_score_codex":0.000072584386,"about_ca_topic_score_gemma":0.0012061665,"teacher_disagreement_score":0.14915758,"about_ca_system_score_codex":0.000051604267,"about_ca_system_score_gemma":0.0002647923,"threshold_uncertainty_score":0.9991252},"labels":[],"label_agreement":null},{"id":"W2106788020","doi":"10.3109/13693780903300319","title":"Activated dormant <i>Cryptococcus gattii</i> infection in a Dutch tourist who visited Vancouver Island (Canada): a molecular epidemiological approach","year":2010,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Cryptococcus gattii; Epidemiology; Molecular epidemiology; Tourism; Cryptococcosis; Quarantine; Geography; Biology; Microbiology; Medicine; Ecology; Archaeology; Pathology; Genetics","score_opus":0.007549682229054963,"score_gpt":0.26371038882362724,"score_spread":0.2561607065945723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106788020","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9785679,0.000057767465,0.0014776458,0.002784768,0.001014452,0.00059722416,0.0000057251223,0.000075398995,0.015419093],"genre_scores_gemma":[0.9948752,0.000078055426,0.00033921245,0.003941907,0.00028764398,0.00020910718,0.00002387526,0.000017429833,0.00022756458],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99790144,0.00024039556,0.00051829015,0.00043326666,0.0003849522,0.00052163395],"domain_scores_gemma":[0.99871415,0.0004888776,0.00009841813,0.00025605503,0.000109863766,0.0003326155],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00070402573,0.00024263126,0.0007758364,0.00016837103,0.000120935336,0.0000067726382,0.00009587578,0.00057005166,0.0010434858],"category_scores_gemma":[0.002850962,0.00017037334,0.00010286496,0.0004906266,0.00027453096,0.000039145038,0.00011098369,0.0015605531,0.0000125879415],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008396844,0.002272915,0.61997354,0.00026107696,0.00040841856,0.0024189483,0.00021367196,0.000062241474,0.057917718,0.0019865981,0.30847958,0.0051656063],"study_design_scores_gemma":[0.0065317764,0.0013497599,0.84643567,0.00012446231,0.00013971876,0.00080038834,0.00008812592,0.005871857,0.0028027818,0.000637215,0.13468954,0.0005287138],"about_ca_topic_score_codex":0.062423572,"about_ca_topic_score_gemma":0.4292088,"teacher_disagreement_score":0.36678523,"about_ca_system_score_codex":0.00015299564,"about_ca_system_score_gemma":0.00041502423,"threshold_uncertainty_score":0.9998697},"labels":[],"label_agreement":null},{"id":"W2107635807","doi":"10.1080/13693780410001712043","title":"Onychomycosis: a critical study of techniques and criteria for confirming the etiologic significance of nondermatophytes","year":2005,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":137,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women's College Hospital; Mediprobe Research (Canada); University of Toronto; Ministry of Health and Long Term Care; Ministry of Health; Sunnybrook Health Science Centre","funders":"","keywords":"Nail (fastener); Population; Etiology; Gold standard (test); Medicine; Pathology; Dermatology; Internal medicine; Materials science","score_opus":0.03223084187961209,"score_gpt":0.39435520866420415,"score_spread":0.36212436678459203,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107635807","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926837,0.0010613885,0.0001431081,0.004668071,0.000056791287,0.0010329892,0.00001598202,0.000023659735,0.0003143155],"genre_scores_gemma":[0.99788904,0.00008422867,0.00096801337,0.00057356956,0.00011924225,0.00033879932,0.0000031595325,0.000006790829,0.000017125636],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991031,0.000095985524,0.000307063,0.00016848912,0.00016792474,0.00015743534],"domain_scores_gemma":[0.99859375,0.0009903713,0.00006096552,0.0001486858,0.00009510558,0.00011114928],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002273092,0.0000879638,0.0003660214,0.00004316387,0.00004330156,0.0000023141629,0.00007989543,0.00010446563,0.00024705156],"category_scores_gemma":[0.0008543711,0.000052121406,0.00005091117,0.000060834092,0.00039479233,0.000017885835,0.000039380517,0.00009142869,9.913634e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0077925636,0.03939772,0.5213979,0.003630479,0.0019379318,0.0009181491,0.0055785915,6.9426744e-7,0.031783536,0.02404862,0.012190124,0.35132366],"study_design_scores_gemma":[0.03876955,0.056299277,0.7698916,0.0014340889,0.0043232623,0.0015680018,0.010510313,0.0019169112,0.05259641,0.010300392,0.051539343,0.0008508169],"about_ca_topic_score_codex":0.000029306368,"about_ca_topic_score_gemma":0.000011762193,"teacher_disagreement_score":0.35047287,"about_ca_system_score_codex":0.000012232933,"about_ca_system_score_gemma":0.00006978988,"threshold_uncertainty_score":0.27050412},"labels":[],"label_agreement":null},{"id":"W2108201008","doi":"10.1080/13693780802380545","title":"Identification of a new species,<i>Candida subhashii</i>, as a cause of peritonitis","year":2008,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; SickKids Foundation; Ministry of Health and Long Term Care; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Internal transcribed spacer; Biology; Phylogenetic tree; Candida albicans; Microbiology; Ribosomal RNA; Candida dubliniensis; Candida parapsilosis; Ribosomal DNA; Candida tropicalis; Clade; Gene; Corpus albicans; Genetics","score_opus":0.02943079930343519,"score_gpt":0.30836888598225054,"score_spread":0.27893808667881537,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2108201008","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99306697,0.00036212115,0.00037556273,0.0017910427,0.00019355744,0.00020961334,0.000009363966,0.000020063584,0.003971679],"genre_scores_gemma":[0.98959595,0.00062424265,0.00010074708,0.0004130005,0.00016272518,0.0000065685417,0.0000144280875,0.000009203691,0.009073134],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99832004,0.00007211195,0.000591187,0.00022821465,0.00057862635,0.00020980116],"domain_scores_gemma":[0.99888605,0.00019193187,0.00015572154,0.00032416586,0.00015997917,0.0002821727],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00031654016,0.000096177915,0.0004854127,0.00008649728,0.000041677224,0.0000013508303,0.00012984738,0.00022316877,0.0044740574],"category_scores_gemma":[0.002301228,0.00008157071,0.000114223905,0.00023533586,0.00073354464,0.000032575375,0.00003769453,0.0002181488,0.00007124354],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013378775,0.0010143553,0.7893294,0.0003934967,0.00018195607,0.0011354191,0.0024734112,2.9561158e-7,0.1647855,0.0033005408,0.032017805,0.0040299157],"study_design_scores_gemma":[0.0017256882,0.0007837409,0.95607644,0.00008482315,0.000090467256,0.0004372987,0.00028044585,0.000024015077,0.031255703,0.00039973675,0.008751316,0.000090332],"about_ca_topic_score_codex":0.00035574313,"about_ca_topic_score_gemma":0.0001924723,"teacher_disagreement_score":0.16674702,"about_ca_system_score_codex":0.000049922124,"about_ca_system_score_gemma":0.0010496479,"threshold_uncertainty_score":0.996436},"labels":[],"label_agreement":null},{"id":"W2109042013","doi":"10.3109/13693786.2010.535031","title":"Disruption of sphingolipid biosynthetic gene<i>IPT1</i>reduces<i>Candida albicans</i>adhesion and prevents activation of human gingival epithelial cell innate immune defense","year":2010,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"National Institute of Dental and Craniofacial Research; National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health","keywords":"Candida albicans; TLR2; Biology; Innate immune system; Microbiology; Defensin; Beta defensin; Gene expression; Mutant; Corpus albicans; Gene; Cell biology; Molecular biology; Immune system; Immunology; Antimicrobial; Biochemistry","score_opus":0.006291157112635909,"score_gpt":0.23266262298158782,"score_spread":0.2263714658689519,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109042013","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980531,0.00013084068,0.00010457759,0.0003265302,0.00080586446,0.00022009933,0.000043500244,0.00002641372,0.00028910616],"genre_scores_gemma":[0.9991803,0.00012209761,0.00011651851,0.00009621433,0.000094419294,0.000009883331,0.000079517355,0.000019489227,0.0002815274],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985218,0.00022697943,0.00053837494,0.00029806187,0.00008747546,0.0003272856],"domain_scores_gemma":[0.99903744,0.00026666443,0.00037474162,0.00020812097,0.000060249866,0.000052764244],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004658127,0.00019315243,0.0005037221,0.00015479964,0.00015416957,0.0000052928026,0.00022095731,0.00052691624,0.0009666826],"category_scores_gemma":[0.00021761416,0.00016642666,0.00010579692,0.000101158126,0.0010366153,0.0000878963,0.00017022942,0.00053120445,0.00001564433],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019950718,0.00035404548,0.0009296002,0.00007531642,0.000053341482,0.0000026998248,0.000409142,8.003702e-7,0.99366647,0.00041334023,0.00010478803,0.0037909567],"study_design_scores_gemma":[0.0013680162,0.00047518246,0.008080152,0.00007829848,0.000057280544,0.00006309428,0.00010641239,0.00000893703,0.98810226,0.000354138,0.0011527395,0.00015348074],"about_ca_topic_score_codex":0.00045624646,"about_ca_topic_score_gemma":0.0000334173,"teacher_disagreement_score":0.0071505522,"about_ca_system_score_codex":0.000014752627,"about_ca_system_score_gemma":0.00009001472,"threshold_uncertainty_score":0.9999466},"labels":[],"label_agreement":null},{"id":"W2109059076","doi":"10.1080/13693780802132763","title":"Seasonal variations in the clinical presentation of pulmonary and extrapulmonary blastomycosis","year":2008,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba","funders":"","keywords":"Blastomycosis; Blastomyces dermatitidis; Medicine; Incidence (geometry); Asymptomatic; Blastomyces; Pneumonia; Dimorphic fungus; Disease; Lung; Dermatology; Pathology; Internal medicine; Biology","score_opus":0.0509214139683884,"score_gpt":0.3618199162118447,"score_spread":0.31089850224345633,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109059076","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98495907,0.0005697834,0.00023743972,0.008531389,0.00016949236,0.00021742718,0.00000370196,0.000011715393,0.005300003],"genre_scores_gemma":[0.99728316,0.0013309888,0.00021808899,0.0008301798,0.00017473842,0.000046030127,0.000008877126,0.000003832049,0.000104115294],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989333,0.0002298854,0.00033091262,0.0001404703,0.00024472765,0.000120717654],"domain_scores_gemma":[0.9984683,0.00125919,0.000047148842,0.00009978629,0.00004920035,0.00007639973],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00055532606,0.00006079057,0.00023558942,0.00007204197,0.00008423261,0.000001101424,0.00005148988,0.00013864296,0.00029235586],"category_scores_gemma":[0.00092054147,0.00003943245,0.000054639037,0.00020604166,0.00046237247,0.000026148635,0.000039612023,0.000291805,0.0000061017263],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012427263,0.00087452156,0.98346823,0.00002835029,0.000045971552,0.0003450222,0.00039983916,7.6583115e-7,0.000104281484,0.0010329928,0.0036433828,0.009932344],"study_design_scores_gemma":[0.00056853105,0.00033045455,0.99236923,0.000019736615,0.000036770703,0.0012040631,0.00015288779,0.0018964546,0.0000048251513,0.00024990362,0.0031338218,0.000033312106],"about_ca_topic_score_codex":0.00006873745,"about_ca_topic_score_gemma":0.000028208078,"teacher_disagreement_score":0.012324101,"about_ca_system_score_codex":0.000010367911,"about_ca_system_score_gemma":0.00011659567,"threshold_uncertainty_score":0.3201092},"labels":[],"label_agreement":null},{"id":"W2111004394","doi":"10.1080/13693780310001610056","title":"Prevalence of<i>Malassezia</i>species on various body sites in clinically healthy subjects representing different age groups","year":2004,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; Women's College Hospital; University of Toronto; Mediprobe Research (Canada); Sunnybrook Health Science Centre","funders":"","keywords":"Malassezia; Forehead; Scalp; Age groups; Agar; Biology; Medicine; Dermatology; Demography; Surgery","score_opus":0.025328816465484117,"score_gpt":0.3348310505602206,"score_spread":0.3095022340947365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111004394","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934075,0.0004977617,0.00004291594,0.0032639122,0.00027258834,0.0005165274,0.000009872539,0.00004971802,0.0019391881],"genre_scores_gemma":[0.9964897,0.00091834186,0.00012504765,0.001926404,0.0001813238,0.000054564818,0.0000298458,0.00001888361,0.0002558551],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99745363,0.0001829722,0.00075958786,0.0004913463,0.00062654336,0.0004859221],"domain_scores_gemma":[0.9980333,0.00089692924,0.00017482179,0.00039138095,0.000046923276,0.00045664352],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036080595,0.00019676506,0.000657691,0.00015808907,0.000047515772,0.000005830784,0.00017642528,0.00026511762,0.0005937543],"category_scores_gemma":[0.0028557193,0.00014594528,0.00016195196,0.00019968666,0.00027748232,0.000026924085,0.00012465833,0.00045624917,0.000045960158],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014354744,0.004465246,0.9852627,0.00052516785,0.00008874193,0.0038063582,0.00017117149,0.0000044459375,0.0006401623,0.0022974561,0.00015880204,0.0011443064],"study_design_scores_gemma":[0.0065351096,0.0037906645,0.9872662,0.00040167276,0.00011088173,0.000060483846,0.000029113882,0.000029585957,0.00021723671,0.0013636949,0.000093212424,0.00010217671],"about_ca_topic_score_codex":0.00011661041,"about_ca_topic_score_gemma":0.0001100888,"teacher_disagreement_score":0.005099635,"about_ca_system_score_codex":0.00015630244,"about_ca_system_score_gemma":0.00027608706,"threshold_uncertainty_score":0.6501193},"labels":[],"label_agreement":null},{"id":"W2113286944","doi":"10.3109/13693786.2013.807445","title":"Antioxidative and immunogenic properties of catalase-peroxidase protein in<i>Penicillium marneffei</i>","year":2013,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Chiang Mai University","keywords":"Penicillium marneffei; Catalase; Microbiology; Peroxidase; Hydrogen peroxide; Western blot; Biology; Yeast; Penicillium; Fungus; Oxidative stress; Gene; Enzyme; Biochemistry; Virology; Botany","score_opus":0.009887515026889077,"score_gpt":0.22806452114682466,"score_spread":0.21817700611993557,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2113286944","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930998,0.0016068534,0.000006879731,0.0034669128,0.000081233615,0.00072652195,0.000001997356,0.00002082188,0.0009889699],"genre_scores_gemma":[0.9984028,0.00020695862,0.00010556145,0.00040976593,0.00004011107,0.00025399937,0.0000036328645,0.000008763039,0.0005684452],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990235,0.000088910296,0.0003092287,0.00018512734,0.00017572886,0.00021751624],"domain_scores_gemma":[0.9995103,0.00008347564,0.000052591782,0.000139766,0.00010380671,0.00011009166],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023349837,0.00011034338,0.00039603637,0.000106704254,0.00004339985,0.000004006464,0.000053716263,0.0001452019,0.0006304646],"category_scores_gemma":[0.00085128983,0.0000743427,0.000041140425,0.00016174844,0.00051359273,0.000053553387,0.00009421359,0.0002539362,0.000056069453],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024963755,0.0007879928,0.06661678,0.00053656125,0.00018939485,0.000090082714,0.0008957529,2.492943e-7,0.9215909,0.0006129877,0.0016354037,0.0067942156],"study_design_scores_gemma":[0.006648558,0.00361251,0.7626846,0.0011985741,0.00012192845,0.00036348472,0.0012906985,0.00037545044,0.2186,0.00042035355,0.0042910352,0.0003928379],"about_ca_topic_score_codex":0.0010224126,"about_ca_topic_score_gemma":0.00008302042,"teacher_disagreement_score":0.70299095,"about_ca_system_score_codex":0.000031758922,"about_ca_system_score_gemma":0.00010547965,"threshold_uncertainty_score":0.69031453},"labels":[],"label_agreement":null},{"id":"W2115322113","doi":"10.1080/13693780601188610","title":"Deep fungal dermatitis in three inland bearded dragons (<i>Pogona vitticeps</i>) caused by the<i>Chrysosporium</i>anamorph of<i>Nannizziopsis vriesii</i>","year":2007,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Ocular Infections and Treatments","field":"Medicine","cited_by":87,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Alberta Museum; University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Itraconazole; Trichophyton; Dermatology; Dermatomycosis; Miconazole; Biology; Lizard; Fungus; Terbinafine; Pathology; Medicine; Antifungal; Zoology; Botany","score_opus":0.007462969726300044,"score_gpt":0.25887277149047894,"score_spread":0.2514098017641789,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2115322113","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98351336,0.001365733,0.004842197,0.004809272,0.0005761443,0.00061613886,0.000021659023,0.00005579677,0.0041997316],"genre_scores_gemma":[0.9960586,0.0001464256,0.00034581643,0.002937406,0.0001597237,0.000051356797,0.00005947587,0.000029691942,0.00021151199],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99767447,0.00013988584,0.0006813253,0.00033002926,0.0005859422,0.0005883758],"domain_scores_gemma":[0.99818707,0.0007788288,0.00014525176,0.0004210134,0.00011903186,0.0003488382],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00090668595,0.00023672332,0.00062174274,0.00020276404,0.00012804454,0.000008962803,0.00018926886,0.00042343207,0.0009622413],"category_scores_gemma":[0.0007145844,0.00016855769,0.00014256068,0.00060996925,0.0005072824,0.00005544777,0.000094587704,0.0005720745,0.00006766447],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017292627,0.001331874,0.9728888,0.00009262314,0.0004053798,0.0021330726,0.0004983441,0.000004179662,0.00106532,0.00057571253,0.009374532,0.011457186],"study_design_scores_gemma":[0.0076337615,0.00084781693,0.9453974,0.00010776924,0.0004222749,0.000887771,0.00018786108,0.00024301172,0.0031068705,0.0004901828,0.040415056,0.00026025428],"about_ca_topic_score_codex":0.00072693784,"about_ca_topic_score_gemma":0.0026927982,"teacher_disagreement_score":0.031040525,"about_ca_system_score_codex":0.00013510528,"about_ca_system_score_gemma":0.00024479695,"threshold_uncertainty_score":0.999951},"labels":[],"label_agreement":null},{"id":"W2117153281","doi":"10.1080/mmy.39.2.199.206","title":"Epidemiology of<i>Malassezia</i>yeasts associated with pityriasis versicolor in Ontario, Canada","year":2001,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":137,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Hospital for Sick Children; Ministry of Health and Long Term Care; University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Pityriasis; Malassezia; Epidemiology; Dermatology; Medicine; Microbiology; Biology; Pathology","score_opus":0.021941642655915503,"score_gpt":0.2683383955581849,"score_spread":0.2463967529022694,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2117153281","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933664,0.00020268708,0.000009408273,0.0032555345,0.00021733949,0.00026181477,0.000008621954,0.000015866286,0.0026622778],"genre_scores_gemma":[0.99620515,0.000029061257,0.00006710243,0.0028477937,0.000031770174,0.000035367124,0.00007701645,0.000011223225,0.0006955344],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983302,0.00020959572,0.0003988824,0.00028063945,0.00031832108,0.00046239668],"domain_scores_gemma":[0.99819607,0.0009827326,0.00013326902,0.00018608413,0.00006946806,0.00043239287],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00032820416,0.00014494923,0.0007443209,0.000090675065,0.000027304419,4.090888e-7,0.00010019088,0.00024157666,0.0036018998],"category_scores_gemma":[0.0025467335,0.00010725168,0.00006338309,0.00024098324,0.00017210086,0.000019297819,0.00004179491,0.00033088162,0.000009266235],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00072936696,0.000673273,0.9914754,0.000010539505,0.0002456169,0.003543869,0.000031294436,0.000003424906,0.0000031572824,0.00013979009,0.002305216,0.0008390521],"study_design_scores_gemma":[0.005188428,0.00093630597,0.98991716,0.00009949484,0.00016826848,0.00015299773,0.00003150349,0.00004562268,0.0000069377684,0.000095651136,0.0032751143,0.000082493636],"about_ca_topic_score_codex":0.9087204,"about_ca_topic_score_gemma":0.9954025,"teacher_disagreement_score":0.08668213,"about_ca_system_score_codex":0.0009290308,"about_ca_system_score_gemma":0.003908767,"threshold_uncertainty_score":0.99730897},"labels":[],"label_agreement":null},{"id":"W2118499822","doi":"10.3109/13693780802712523","title":"<i>In vitro</i>pharmacodynamic characteristics of griseofulvin against dermatophyte isolates of<i>Trichophyton tonsurans</i>from tinea capitis patients","year":2009,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mediprobe Research (Canada); Sunnybrook Health Science Centre","funders":"","keywords":"Trichophyton tonsurans; Tinea capitis; Griseofulvin; Dermatophyte; Microsporum canis; Medicine; Microsporum; Microbiology; Dermatology; Canis; Trichophyton; Veterinary medicine; Antifungal; Biology; Botany","score_opus":0.00353927819580977,"score_gpt":0.24743632084426734,"score_spread":0.24389704264845757,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2118499822","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99654144,0.00059384207,0.000017916156,0.0009054164,0.0004330514,0.00037080183,0.0005640834,0.000022241271,0.0005512101],"genre_scores_gemma":[0.9959664,0.00079769245,0.00013649068,0.0023795513,0.00011062646,0.00001668185,0.000541707,0.0000165897,0.00003429447],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99818593,0.00009583503,0.0007266201,0.00027844982,0.00037117858,0.00034195938],"domain_scores_gemma":[0.99890363,0.00021489257,0.00023245206,0.00022082045,0.00011543402,0.00031279578],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000078148056,0.00020314421,0.00077535934,0.00017324045,0.000022429924,0.0000024230665,0.00014427736,0.00021408538,0.00045363832],"category_scores_gemma":[0.0002774469,0.0001749695,0.00015524385,0.0002602799,0.00012503896,0.000051476287,0.00003604335,0.00024141693,0.000024548463],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0050744964,0.010761722,0.59300363,0.00045580833,0.00048309533,0.0023060355,0.00029009287,0.0000013047102,0.17135476,0.000041978103,0.0029754718,0.2132516],"study_design_scores_gemma":[0.009581914,0.00075569213,0.9721228,0.00019537982,0.00024590554,0.000016331001,0.000009247212,0.00048907247,0.014758791,0.00016624757,0.0014895218,0.00016911935],"about_ca_topic_score_codex":0.00008795048,"about_ca_topic_score_gemma":0.00000555358,"teacher_disagreement_score":0.37911916,"about_ca_system_score_codex":0.0000671435,"about_ca_system_score_gemma":0.00014867217,"threshold_uncertainty_score":0.7135049},"labels":[],"label_agreement":null},{"id":"W2118839790","doi":"10.1080/13693780410001731583","title":"<i>In vitro</i>activities of posaconazole, ravuconazole, terbinafine, itraconazole and fluconazole against dermatophyte, yeast and non-dermatophyte species","year":2004,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":78,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mediprobe Research (Canada); Sunnybrook Health Science Centre","funders":"","keywords":"Posaconazole; Terbinafine; Dermatophyte; Itraconazole; Microbiology; Microsporum; Fluconazole; Biology; Trichophyton; Pharmacology; Antifungal","score_opus":0.004343832484835038,"score_gpt":0.23430631071067629,"score_spread":0.22996247822584126,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2118839790","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9895382,0.0022483761,0.000022506298,0.0034573572,0.0002500634,0.0004765896,0.00009564017,0.000036449142,0.0038748218],"genre_scores_gemma":[0.9947824,0.0012820835,0.0003231083,0.0030707368,0.00015234578,0.00006354153,0.00005627859,0.00003248797,0.00023701676],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9979843,0.000051642637,0.00056451885,0.00044028653,0.00043213496,0.00052713935],"domain_scores_gemma":[0.9988762,0.00015148812,0.00013770965,0.00024847753,0.000058416677,0.0005276766],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001329988,0.0003274624,0.00087320775,0.00026692485,0.000075843804,0.000016263662,0.00011553175,0.00028605812,0.00020787239],"category_scores_gemma":[0.00011000179,0.0002864262,0.000112716276,0.00021093497,0.0007250412,0.00020014567,0.00014902824,0.00034779854,0.00002008888],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005109306,0.0075244145,0.40127102,0.0033055965,0.0012616734,0.01570866,0.001845859,0.00001534262,0.52438945,0.009266511,0.002441877,0.027860297],"study_design_scores_gemma":[0.02188933,0.0004875832,0.8655069,0.00043579817,0.00022752,0.001482179,0.00053010124,0.0001308264,0.103696264,0.0011862777,0.0039663496,0.00046087423],"about_ca_topic_score_codex":0.00012926792,"about_ca_topic_score_gemma":0.000046410376,"teacher_disagreement_score":0.46423587,"about_ca_system_score_codex":0.00007614645,"about_ca_system_score_gemma":0.00034939274,"threshold_uncertainty_score":0.9999588},"labels":[],"label_agreement":null},{"id":"W2121397453","doi":"10.3109/13693781003767584","title":"Disruption of fungal cell wall by antifungal<i>Echinacea</i>extracts","year":2010,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Herbal Medicine Research Studies","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Carleton University","funders":"Guangdong Academy of Sciences; Natural Sciences and Engineering Research Council of Canada","keywords":"Echinacea (animal); Cryptococcus neoformans; Biology; Mutant; Saccharomyces cerevisiae; Microbiology; Cell wall; Antimicrobial; Gene; Biochemistry","score_opus":0.009258363507638425,"score_gpt":0.3229148094863827,"score_spread":0.31365644597874426,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121397453","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96608514,0.00080182124,0.00014428668,0.015745265,0.0007407818,0.0004510896,0.000013305882,0.00007362584,0.015944665],"genre_scores_gemma":[0.99524015,0.0005049884,0.00038689925,0.0014170561,0.00044224234,0.000032571734,0.0000332489,0.000025821413,0.0019170056],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99719626,0.00015211025,0.0005042077,0.0003635812,0.0011570792,0.00062673487],"domain_scores_gemma":[0.9977052,0.0008229763,0.000116813026,0.00036881905,0.00019481994,0.0007913288],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0012678623,0.00019783541,0.00067434943,0.00015287072,0.00007232829,0.0000039663305,0.00023794132,0.00046614502,0.0039653033],"category_scores_gemma":[0.0055382997,0.0001446079,0.00010619181,0.00027513638,0.00080646365,0.000050861625,0.00014952973,0.0015795549,0.00016836422],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003629776,0.0015972675,0.110424384,0.00058661547,0.0001132602,0.0007338887,0.00030780508,6.621688e-8,0.682326,0.0004204602,0.18281925,0.020308005],"study_design_scores_gemma":[0.0105538,0.006071531,0.35196802,0.0003776844,0.00034861578,0.00111015,0.00033747166,0.0007148591,0.0837027,0.0003735116,0.5439039,0.00053776614],"about_ca_topic_score_codex":0.00016435918,"about_ca_topic_score_gemma":0.000064212174,"teacher_disagreement_score":0.59862334,"about_ca_system_score_codex":0.00004181573,"about_ca_system_score_gemma":0.0003815898,"threshold_uncertainty_score":0.9969452},"labels":[],"label_agreement":null},{"id":"W2121845748","doi":"10.1080/13693780500411097","title":"Isolated endogenous endophthalmitis due to a sporodochial-forming<i>Phialemonium curvatum</i>acquired through intracavernous autoinjections","year":2005,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Ocular Infections and Treatments","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Alberta","keywords":"Enucleation; Endophthalmitis; Acremonium; Microbiology; Medicine; Biology; Dermatology; Ophthalmology","score_opus":0.020782988017464754,"score_gpt":0.28833329619359527,"score_spread":0.2675503081761305,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121845748","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9274047,0.0005231333,0.0052695693,0.01187171,0.0022359977,0.0015245557,0.000041743766,0.0005637302,0.050564855],"genre_scores_gemma":[0.9895004,0.00014706675,0.0038609977,0.0035303829,0.0012693153,0.00019727359,0.00008728677,0.00005774276,0.0013495547],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99735796,0.000121998826,0.0006125815,0.00057592476,0.00053196773,0.00079957425],"domain_scores_gemma":[0.99842083,0.00018180441,0.00010798965,0.00048184115,0.00014220414,0.00066533097],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00025134702,0.00032811204,0.00072004675,0.00023559746,0.00033833671,0.000019652802,0.00017259964,0.00048885425,0.005207646],"category_scores_gemma":[0.0006381674,0.00028794998,0.00022875068,0.0006372958,0.00020327324,0.00013129781,0.00012470309,0.00042869206,0.0016037275],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0040335343,0.028535927,0.07611797,0.00048005854,0.0057370374,0.14292498,0.009740923,0.00021238743,0.046727825,0.012847598,0.033594415,0.6390473],"study_design_scores_gemma":[0.015926344,0.011120218,0.04142643,0.00033875386,0.0012912678,0.45095804,0.00019355565,0.0013691913,0.013433068,0.0012731971,0.4614145,0.0012554221],"about_ca_topic_score_codex":0.00089584826,"about_ca_topic_score_gemma":0.0002013201,"teacher_disagreement_score":0.63779193,"about_ca_system_score_codex":0.00037937824,"about_ca_system_score_gemma":0.0004756831,"threshold_uncertainty_score":0.99995726},"labels":[],"label_agreement":null},{"id":"W2122986119","doi":"10.3109/13693786.2010.512300","title":"Early treatment of candidemia in adults: a review","year":2010,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":96,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Invasive candidiasis; Antifungal; Medicine; Intensive care medicine; Biomarker; Retrospective cohort study; Clinical significance; Internal medicine; Biology; Fluconazole; Dermatology","score_opus":0.032670844078457405,"score_gpt":0.39514279814999054,"score_spread":0.36247195407153315,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122986119","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0006301276,0.9956151,0.0000018691812,0.0004076465,0.00024390566,0.0016462764,0.000025954152,0.000016693453,0.0014124184],"genre_scores_gemma":[0.00011936697,0.9983654,0.000058191967,0.00039568736,0.00019961192,0.00026082824,0.00009946567,0.000025327497,0.0004761074],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9971506,0.00030314407,0.001279139,0.00047499358,0.00042483147,0.00036727893],"domain_scores_gemma":[0.9980324,0.0006587199,0.00030653182,0.0005833511,0.00007174384,0.00034727808],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006308313,0.00032745002,0.004429147,0.0001521563,0.000014248481,0.0000010948488,0.00018726783,0.0012377147,0.0027348523],"category_scores_gemma":[0.0025707586,0.00019957674,0.0006005469,0.00034801083,0.00033439338,0.000012574088,0.00003718313,0.00086818024,0.000113505994],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006450526,0.00039285948,0.0019185346,0.08134819,0.000061984625,0.0005097925,0.000027790207,1.5514486e-10,1.5091113e-7,0.00004739056,0.0008094198,0.91481936],"study_design_scores_gemma":[0.0008114296,0.0009643226,0.0019200005,0.13033389,0.00069386116,0.00011471914,0.000002529422,2.1574245e-7,1.6256224e-7,0.0000108715985,0.8650346,0.000113451686],"about_ca_topic_score_codex":0.00035169173,"about_ca_topic_score_gemma":0.0009192712,"teacher_disagreement_score":0.91470593,"about_ca_system_score_codex":0.0002677598,"about_ca_system_score_gemma":0.0019993493,"threshold_uncertainty_score":0.99817675},"labels":[],"label_agreement":null},{"id":"W2125131696","doi":"10.1080/mmy.39.4.321.328","title":"Comparative efficacies of commonly used disinfectants and antifungal pharmaceutical spray preparations against dermatophytic fungi","year":2001,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Trichophyton; Bifonazole; Microbiology; Microsporum; Ammonium; Terbinafine; Chemistry; Dermatophyte; Griseofulvin; Fungicide; Trichophyton tonsurans; Biology; Antifungal; Organic chemistry; Medicine; Botany; Dermatology; Itraconazole","score_opus":0.039700681229219485,"score_gpt":0.3776373371903428,"score_spread":0.3379366559611233,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2125131696","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929021,0.001495746,0.00009257797,0.001011697,0.00013457867,0.00043759955,0.000028414697,0.000044706794,0.0038525986],"genre_scores_gemma":[0.9985466,0.0005264263,0.00008648063,0.0005833898,0.00006606129,0.000025636102,0.00005535626,0.000009810222,0.00010022248],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99867433,0.00013873819,0.00033603216,0.00023410717,0.0003354345,0.00028137566],"domain_scores_gemma":[0.99869657,0.000526244,0.000071522234,0.0001719655,0.0000667944,0.00046689707],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000109145505,0.00015546884,0.0005652097,0.000086235515,0.00008212798,0.0000053188714,0.00006755639,0.00014125707,0.0006675709],"category_scores_gemma":[0.00021127939,0.00011898333,0.0000817889,0.00019421903,0.0005006371,0.000044917902,0.000060381168,0.00019391156,0.000050088885],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00094944716,0.003035899,0.9786245,0.00015515418,0.0005907265,0.0013128216,0.0004801868,0.0000038163566,0.006893602,0.0008914106,0.0016963199,0.005366075],"study_design_scores_gemma":[0.009772531,0.0009927893,0.97231066,0.0001830782,0.0006593629,0.0007922933,0.000135088,0.002638084,0.0032225642,0.000120130084,0.008961917,0.00021147735],"about_ca_topic_score_codex":0.0000075340095,"about_ca_topic_score_gemma":0.000019529149,"teacher_disagreement_score":0.008823083,"about_ca_system_score_codex":0.00002927319,"about_ca_system_score_gemma":0.0001795946,"threshold_uncertainty_score":0.7309433},"labels":[],"label_agreement":null},{"id":"W2127221509","doi":"10.3109/13693780903496617","title":"Cutaneous cryptococcosis in solid organ transplant recipients","year":2010,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Alberta Hospital; University of Alberta; University Health Network; Western University","funders":"National Institute of Allergy and Infectious Diseases; Astellas Pharma","keywords":"Cryptococcosis; Medicine; Fluconazole; Mycosis; Amphotericin B; Internal medicine; Transplantation; Surgery; Dermatology; Gastroenterology; Pathology; Antifungal","score_opus":0.00829324634053131,"score_gpt":0.298361163062831,"score_spread":0.2900679167222997,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2127221509","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98615104,0.000036586684,0.000052886382,0.0053072046,0.0012806781,0.00022840431,0.0000038954777,0.000051990304,0.0068873074],"genre_scores_gemma":[0.9976138,0.00016676057,0.00015792681,0.0013896711,0.00026255814,0.00005880531,0.000008146714,0.000011268996,0.00033107537],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99900925,0.0000372618,0.00026071694,0.00017511164,0.00021630112,0.00030136204],"domain_scores_gemma":[0.99934065,0.00021660922,0.000024406458,0.00015028207,0.000045094217,0.00022294105],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00019867417,0.00010354793,0.00033289968,0.00013223878,0.00006352197,0.0000032770577,0.00007629983,0.0002944845,0.0046506105],"category_scores_gemma":[0.00074979616,0.00007831356,0.00005213224,0.00019830048,0.00019229668,0.000014217264,0.0000305928,0.0007383294,0.0001759802],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030644934,0.0011988899,0.93318635,0.00005152549,0.00010731955,0.0025728398,0.0011816091,7.600851e-7,0.036550485,0.001219647,0.0059976014,0.017626498],"study_design_scores_gemma":[0.005064786,0.0022951758,0.87908256,0.00025574752,0.00015166844,0.008527273,0.0001789169,0.00046880863,0.004139488,0.0008302909,0.09862443,0.00038082554],"about_ca_topic_score_codex":0.00011636154,"about_ca_topic_score_gemma":0.0013096706,"teacher_disagreement_score":0.09262683,"about_ca_system_score_codex":0.000031772182,"about_ca_system_score_gemma":0.00010331963,"threshold_uncertainty_score":0.9962593},"labels":[],"label_agreement":null},{"id":"W2131467671","doi":"10.1080/13693780500220415","title":"Emergence of disseminated candidiasis caused by<i>Candida krusei</i>during treatment with caspofungin: Case report and review of literature","year":2005,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôtel-Dieu de Québec; Hôpital Fleurimont; Centre Hospitalier Universitaire de Sherbrooke; Centre hospitalier universitaire de Québec","funders":"","keywords":"Caspofungin; Candida krusei; Flucytosine; Voriconazole; Amphotericin B; Internal medicine; Medicine; Biology; Microbiology; Antifungal; Fluconazole","score_opus":0.006903782364512709,"score_gpt":0.29010519496120374,"score_spread":0.283201412596691,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2131467671","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9458744,0.05156207,0.000016978589,0.0017493477,0.000037453272,0.00037988898,0.000041488973,0.000015344283,0.0003230416],"genre_scores_gemma":[0.96682876,0.03192423,0.00014416593,0.00025737734,0.000047082147,0.000028587681,0.000053530435,0.000011599868,0.0007046951],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.99845964,0.00007758155,0.0005647898,0.00032788652,0.00033029137,0.00023981353],"domain_scores_gemma":[0.99888325,0.00012836153,0.0001891055,0.00033575093,0.00016383729,0.00029972076],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00034006924,0.00016940606,0.0007344438,0.000055889694,0.00004145119,0.000001960463,0.00004951556,0.00016913936,0.0011228842],"category_scores_gemma":[0.0005462906,0.000107776934,0.00007155829,0.00029115766,0.0002821203,0.00004254053,0.000023805782,0.00017466406,0.0000010931157],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024675315,0.0024277621,0.49334309,0.027464993,0.0010068984,0.3647057,0.0031211604,3.8674935e-7,0.043660678,0.00006186693,0.01881795,0.04292198],"study_design_scores_gemma":[0.020350678,0.016767696,0.29745817,0.06975555,0.0045966674,0.38444227,0.0028149236,0.00019416791,0.1633573,0.000028376377,0.03856841,0.0016657762],"about_ca_topic_score_codex":0.00026184294,"about_ca_topic_score_gemma":0.0007271281,"teacher_disagreement_score":0.19588491,"about_ca_system_score_codex":0.00005628525,"about_ca_system_score_gemma":0.0002573826,"threshold_uncertainty_score":0.99979025},"labels":[],"label_agreement":null},{"id":"W2132606068","doi":"10.3109/13693780802572547","title":"Microecology of<i>Blastomyces dermatitidis</i>: the Ammonia Hypothesis","year":2009,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Blastomyces dermatitidis; Ammonia; Ammonium; Microbiology; Biology; Ammonium sulfate; Fungus; Yeast extract; Mycelium; Spore; Inoculation; Chemistry; Food science; Fermentation; Botany; Biochemistry; Horticulture; Blastomycosis; Chromatography","score_opus":0.006972084936650299,"score_gpt":0.19801094143719722,"score_spread":0.19103885650054692,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2132606068","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96145034,0.00034806444,0.000010543364,0.029445002,0.00035456498,0.00013939937,0.000108613036,0.0000387252,0.008104733],"genre_scores_gemma":[0.9934225,0.00050248555,0.00010623291,0.005481725,0.00024656547,0.000011104706,0.000051775623,4.3771527e-7,0.00017716865],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99896085,0.00018683767,0.00026178735,0.00015196834,0.00018069062,0.0002578634],"domain_scores_gemma":[0.99427545,0.005435573,0.00008777996,0.000054897057,0.00003900529,0.00010728607],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00024216274,0.00009621279,0.00020843487,0.000013309161,0.00014088149,0.000009155356,0.0003858549,0.0001765055,0.0180694],"category_scores_gemma":[0.0008438752,0.000029213053,0.00008791139,0.0001874862,0.00004951127,0.00003478139,0.00003644735,0.00020920031,0.00054621615],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001633583,0.00055798737,0.030497545,0.000010623315,0.00006382825,0.00009285991,0.000190655,0.0000025497377,0.29624233,0.01119705,0.18761985,0.47336137],"study_design_scores_gemma":[0.000121412704,0.00091904926,0.22900945,0.000033999957,0.00004160264,0.0005802662,0.00016717982,0.00008419258,0.00778563,0.007904875,0.7531542,0.00019810176],"about_ca_topic_score_codex":0.0002167572,"about_ca_topic_score_gemma":0.0004760407,"teacher_disagreement_score":0.5655344,"about_ca_system_score_codex":0.0000084358935,"about_ca_system_score_gemma":0.000018896104,"threshold_uncertainty_score":0.9828282},"labels":[],"label_agreement":null},{"id":"W2133570481","doi":"10.1080/13693780802124026","title":"The expanding host tree species spectrum of<i>Cryptococcus gattii</i>and<i>Cryptococcus neoformans</i>and their isolations from surrounding soil in India","year":2008,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Indian Council of Medical Research; Postgraduate Institute of Medical Education and Research, Chandigarh; Indian National Science Academy","keywords":"Cryptococcus neoformans; Biology; Cryptococcus gattii; Cryptococcus; Host (biology); Cryptococcosis; Botany; Veterinary medicine; Ecology; Microbiology","score_opus":0.016867511733290437,"score_gpt":0.25457464203720204,"score_spread":0.2377071303039116,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2133570481","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9873634,0.0019691186,0.0003525525,0.0029261585,0.000520301,0.00044538698,0.000015782804,0.000038664566,0.00636862],"genre_scores_gemma":[0.9950339,0.0038299796,0.00007827142,0.0003385674,0.00034431941,0.00009521569,0.000009862739,0.000015794496,0.00025408852],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998429,0.00011686718,0.0005083737,0.00027401428,0.000231404,0.00044034774],"domain_scores_gemma":[0.99751806,0.0019313998,0.00011332011,0.00020910645,0.00004164375,0.00018646226],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046426035,0.00020580323,0.00056956604,0.00020146839,0.0005441987,0.000015115671,0.00010741413,0.0002123935,0.00020796708],"category_scores_gemma":[0.0007405207,0.00012838299,0.00007983289,0.00032933077,0.0010207887,0.00007591045,0.000161718,0.0005374805,0.000010089984],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021836096,0.00021235255,0.977344,0.000047977806,0.000199727,0.00011276981,0.0060036913,0.0000015801307,0.006148365,0.0054759146,0.0014889643,0.0027463066],"study_design_scores_gemma":[0.0017935424,0.00041466195,0.9834877,0.00011444479,0.00003595451,0.00018598832,0.0014105896,0.00022372989,0.0008785702,0.0010093855,0.010307479,0.00013790326],"about_ca_topic_score_codex":0.00037879,"about_ca_topic_score_gemma":0.0014191044,"teacher_disagreement_score":0.008818515,"about_ca_system_score_codex":0.00007357265,"about_ca_system_score_gemma":0.00013504643,"threshold_uncertainty_score":0.5235306},"labels":[],"label_agreement":null},{"id":"W2140668119","doi":"10.3109/13693786.2011.560196","title":"Surveillance for Cryptococcus gattii in horses of Vancouver Island, British Columbia, Canada","year":2011,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Abbotsford Veterinary Clinic; Vancouver Coastal Health; University of Saskatchewan; University of British Columbia","funders":"Centers for Disease Control and Prevention","keywords":"Cryptococcus gattii; Cryptococcosis; Cryptococcus; Veterinary medicine; Horse; Colonization; Medicine; Geography; Biology; Immunology; Ecology; Microbiology","score_opus":0.014405237907299197,"score_gpt":0.2398664264755528,"score_spread":0.22546118856825362,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2140668119","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98870593,0.00032653677,0.000110994384,0.0002368,0.001268652,0.00047134314,0.00006034214,0.0000137145,0.008805659],"genre_scores_gemma":[0.9975697,0.00010282539,0.00018135276,0.00060595386,0.000094581424,0.00013157046,0.000005449716,0.00000812252,0.0013004605],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991196,0.00003992306,0.0002830409,0.00015982072,0.00016063049,0.00023701711],"domain_scores_gemma":[0.9993224,0.00030657148,0.000049867613,0.000100191864,0.00011300996,0.000107960666],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00022677399,0.000056672132,0.00040016873,0.000028426324,0.00004288083,0.0000023793898,0.000058536352,0.00012264308,0.0029463188],"category_scores_gemma":[0.0012090309,0.00006780291,0.000043266875,0.00012686147,0.00016161596,0.000011515376,0.0000317539,0.00014371936,0.0000014874231],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005600165,0.00017169311,0.69414324,0.00009006105,0.00004257083,0.0001516163,0.00006156433,1.2963943e-7,0.000026045358,0.000016721384,0.30209762,0.0031427636],"study_design_scores_gemma":[0.002126929,0.0006818255,0.9134536,0.000077650446,0.000017924542,0.000060626244,0.00014931185,0.000035600617,0.00005531227,0.00024042932,0.08300803,0.000092805014],"about_ca_topic_score_codex":0.9104604,"about_ca_topic_score_gemma":0.9996325,"teacher_disagreement_score":0.21931034,"about_ca_system_score_codex":0.00006497715,"about_ca_system_score_gemma":0.00053977215,"threshold_uncertainty_score":0.9979651},"labels":[],"label_agreement":null},{"id":"W2140872061","doi":"10.3109/13693786.2011.598878","title":"Comparison of the FXG™: RESP (Asp+) real-time PCR assay with direct immunofluorescence and calcofluor white staining for the detection of<i>Pneumocystis jirovecii</i>in respiratory specimens","year":2012,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Pneumocystis jirovecii pneumonia detection and treatment","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto; Public Health Agency of Canada","funders":"","keywords":"Pneumocystis jirovecii; Staining; Immunofluorescence; Biology; Molecular biology; Microbiology; Pathology; Virology; Antibody; Medicine; Immunology","score_opus":0.020805530897034675,"score_gpt":0.3051752670068383,"score_spread":0.2843697361098036,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2140872061","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929005,0.0018107657,0.0004743761,0.0015933607,0.00051181455,0.0013487892,0.000025735304,0.000045005603,0.0012896624],"genre_scores_gemma":[0.99886537,0.00013127833,0.00015626078,0.00023352061,0.00015230905,0.00017226298,0.00000273662,0.000031440566,0.00025484918],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9974061,0.0004611388,0.0007000797,0.00032558842,0.00060279487,0.0005042737],"domain_scores_gemma":[0.99665827,0.0021414869,0.00036260884,0.00048793072,0.0001240353,0.00022569745],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015554623,0.00024208793,0.00077332486,0.00015657415,0.00017189083,0.0000069748853,0.00019369187,0.00025780118,0.00010013935],"category_scores_gemma":[0.0014189684,0.00013316858,0.00012166755,0.0004003883,0.0006339673,0.000060579303,0.00011458512,0.00043916758,0.0000051813404],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002517094,0.00080868404,0.3362716,0.0001540246,0.00030926397,0.000028179811,0.0014503611,0.000015991993,0.63255644,0.00016862314,0.00022877587,0.025490936],"study_design_scores_gemma":[0.0037466635,0.0024336984,0.8973598,0.00026640276,0.00034575607,0.00016730666,0.00046327626,0.0009946366,0.086937875,0.000014693766,0.007094793,0.0001751074],"about_ca_topic_score_codex":0.00015837453,"about_ca_topic_score_gemma":0.0002576448,"teacher_disagreement_score":0.5610882,"about_ca_system_score_codex":0.00018344939,"about_ca_system_score_gemma":0.00020707096,"threshold_uncertainty_score":0.5430457},"labels":[],"label_agreement":null},{"id":"W2141229046","doi":"10.1080/13693780500220076","title":"Follow-up study of dogs and cats with asymptomatic<i>Cryptococcus gattii</i>infection or nasal colonization","year":2005,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; College of Veterinarians of British Columbia; Vancouver Coastal Health; University of Saskatchewan","funders":"","keywords":"Cryptococcus gattii; Colonization; Asymptomatic; CATS; Biology; Immunology; Cryptococcus; Cryptococcosis; Medicine; Microbiology; Pathology; Internal medicine","score_opus":0.016548685897306556,"score_gpt":0.30147428563038786,"score_spread":0.2849255997330813,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141229046","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961575,0.0000701424,0.00041880092,0.0012498093,0.00028731645,0.00080135727,0.0000014365187,0.000064685264,0.000948914],"genre_scores_gemma":[0.9984821,0.00009274527,0.00025287422,0.00042183584,0.00019434017,0.00014050616,0.0000052024534,0.00001378827,0.00039662176],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988612,0.0000979479,0.00031955526,0.00021954428,0.00030787493,0.00019389547],"domain_scores_gemma":[0.999193,0.00026127705,0.000093152805,0.00013884505,0.00016029229,0.00015342823],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002616331,0.00013080296,0.00043005424,0.00013002171,0.00012486438,0.0000056166855,0.000034206023,0.0001542885,0.0005613218],"category_scores_gemma":[0.0005650117,0.000082465456,0.000026449943,0.00030706706,0.00019556216,0.000048235444,0.000049039976,0.00019785322,0.000015276319],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011079457,0.0022260284,0.9782199,0.00014423073,0.0003800111,0.00008061488,0.0020250308,0.000013772398,0.00043610216,0.0001994553,0.0037853597,0.011381506],"study_design_scores_gemma":[0.012168928,0.015941596,0.96277326,0.00012614763,0.00041080674,0.00051689736,0.00049846905,0.00089413224,0.00024757156,0.000025868108,0.0062267724,0.00016953683],"about_ca_topic_score_codex":0.00042139244,"about_ca_topic_score_gemma":0.005540021,"teacher_disagreement_score":0.0154466685,"about_ca_system_score_codex":0.000057447076,"about_ca_system_score_gemma":0.00013431464,"threshold_uncertainty_score":0.614608},"labels":[],"label_agreement":null},{"id":"W2144201640","doi":"10.3109/13693786.2012.675629","title":"Invasive<i>Scopulariopsis brevicaulis</i>infection in an immunocompromised patient and review of prior cases caused by<i>Scopulariopsis</i>and<i>Microascus</i>species","year":2012,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":66,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Histopathology; Medicine; Lymphoma; Chemotherapy; Biology; Pathology; Surgery","score_opus":0.03605690254811977,"score_gpt":0.32969003498469784,"score_spread":0.29363313243657807,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2144201640","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.020116642,0.97566485,0.0000016192182,0.00021198319,0.0003010134,0.0034188898,0.00017814258,0.000040020106,0.00006685231],"genre_scores_gemma":[0.0019223908,0.9946021,0.00007046055,0.0011056659,0.00014429932,0.0006286174,0.0013766431,0.000079915066,0.00006995214],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.995322,0.00088783505,0.0017245832,0.0008339707,0.00060521247,0.0006263929],"domain_scores_gemma":[0.99705046,0.0005595081,0.0007443842,0.0006597953,0.00013819122,0.00084765506],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005858633,0.0007329496,0.0043381355,0.00033777114,0.00009420709,0.000018194965,0.00017652492,0.00085188675,0.0009834085],"category_scores_gemma":[0.0011479242,0.00053986255,0.00046497578,0.00048285656,0.0004507836,0.00012677167,0.00027136115,0.0007645047,0.000019836405],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008248537,0.0020689908,0.009839873,0.17736444,0.0006652801,0.0008407121,0.00008877415,3.1972085e-9,0.00004838893,0.000022113009,0.0016057789,0.80737317],"study_design_scores_gemma":[0.0031345144,0.0015207389,0.006419088,0.106848545,0.007982345,0.0015247856,0.000011725118,6.8375044e-7,0.00001912423,0.000005614786,0.8719912,0.00054160814],"about_ca_topic_score_codex":0.00080266054,"about_ca_topic_score_gemma":0.00042765657,"teacher_disagreement_score":0.87038547,"about_ca_system_score_codex":0.00028890622,"about_ca_system_score_gemma":0.00085682736,"threshold_uncertainty_score":0.99992985},"labels":[],"label_agreement":null},{"id":"W2146903665","doi":"10.1080/13693780701759658","title":"Disseminated fungal infection in a renal transplant recipient involving<i>Macrophomina phaseolina</i>and<i>Scytalidium dimidiatum</i>: case report and review of taxonomic changes among medically important members of the Botryosphaeriaceae","year":2008,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":77,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Alberta; St. Michael's Hospital","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Macrophomina phaseolina; Biology; Fluconazole; Mycosis; Antifungal; Microbiology; Immunology; Botany","score_opus":0.00798117993772202,"score_gpt":0.23091381351037937,"score_spread":0.22293263357265736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2146903665","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9815627,0.017291745,0.000015504334,0.00033213146,0.00020276477,0.00035477773,0.00019097992,0.0000054414254,0.00004400603],"genre_scores_gemma":[0.9126729,0.086727224,0.000032276654,0.00031860266,0.000060669234,0.000051838884,0.00010418838,0.000010446466,0.00002186694],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983126,0.0002120017,0.00065324595,0.00035541866,0.00022129437,0.00024545126],"domain_scores_gemma":[0.99905866,0.00008182882,0.0003430312,0.00023327554,0.000057434278,0.00022578209],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007195447,0.0001763387,0.00044564076,0.00005007276,0.00006426686,0.0000015142076,0.00011093159,0.0002718016,0.000042435837],"category_scores_gemma":[0.0009411074,0.00012662647,0.00008946346,0.00014202583,0.0006723253,0.0000042437705,0.00011998432,0.00018895538,1.0511905e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045789755,0.00047748277,0.5978081,0.0017537761,0.00013594145,0.038613334,0.00015428128,0.0000021562962,0.35781762,0.000029953999,0.0022029385,0.00054648455],"study_design_scores_gemma":[0.0029888859,0.0014854984,0.7335117,0.0049097533,0.00043965588,0.1731775,0.00003709609,0.0002885206,0.07789802,0.000018422967,0.004646605,0.0005983714],"about_ca_topic_score_codex":0.00046440455,"about_ca_topic_score_gemma":0.0021086822,"teacher_disagreement_score":0.27991962,"about_ca_system_score_codex":0.000015499543,"about_ca_system_score_gemma":0.00023254036,"threshold_uncertainty_score":0.51636773},"labels":[],"label_agreement":null},{"id":"W2149260722","doi":"10.3109/13693786.2012.715246","title":"Characterization of an antigenic chitosanase from the cellulolytic fungus<i>Chaetomium globosum</i>","year":2012,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Indoor Air Quality and Microbial Exposure","field":"Environmental Science","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada; Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada; National Academy of Sciences","keywords":"Chaetomium globosum; Chaetomium; Antigen; Polyclonal antibodies; Microbiology; Antigenicity; Biology; Fungus; Molecular mass; Biochemistry; Chemistry; Enzyme; Botany; Aspergillus","score_opus":0.008227156815008428,"score_gpt":0.22771802588004145,"score_spread":0.219490869065033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149260722","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961123,0.000043601092,0.00051566167,0.0013068088,0.0007943137,0.0001684502,0.000041358322,0.00002355354,0.000993991],"genre_scores_gemma":[0.9959249,0.000023845436,0.00010143148,0.003291723,0.00043246936,0.0000071366944,0.00012327598,0.000009568679,0.00008568071],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985083,0.0003593601,0.0002914713,0.00018391629,0.0003044481,0.00035253636],"domain_scores_gemma":[0.9992401,0.00015573371,0.00011241927,0.00027943257,0.0000052653236,0.00020707681],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006658403,0.000107658794,0.00019078852,0.000011633879,0.00010403803,0.000005435038,0.00038219933,0.00022301351,0.012082183],"category_scores_gemma":[0.0001656639,0.000075391385,0.00005388835,0.00014445343,0.00044525097,0.00015082581,0.00017579691,0.00021053363,0.00047424878],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056534886,0.00038995966,0.04249606,0.0000066897583,0.000018605375,0.000007842943,0.0020057976,0.0000022082065,0.9450189,0.00032652184,0.0010495527,0.008621314],"study_design_scores_gemma":[0.0010626223,0.00028503692,0.7359405,0.000020817628,0.00007400827,0.000045430712,0.0002078056,0.00032181962,0.1920311,0.0002608057,0.06944416,0.00030588286],"about_ca_topic_score_codex":0.0007803976,"about_ca_topic_score_gemma":0.000327382,"teacher_disagreement_score":0.7529878,"about_ca_system_score_codex":0.00003674821,"about_ca_system_score_gemma":0.000030232788,"threshold_uncertainty_score":0.9888209},"labels":[],"label_agreement":null},{"id":"W2152554511","doi":"10.1080/13693780310001644680","title":"Determination of keratin degradation by fungi using keratin azure","year":2004,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Dyeing and Modifying Textile Fibers","field":"Engineering","cited_by":81,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; University of Toronto; Brandon University; Toronto Public Health","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Keratin; Wool; Keratin 6A; Chemistry; In vitro; Degradation (telecommunications); Keratinase; Keratin 8; Biochemistry; Biology; Materials science; Intermediate filament; Cell","score_opus":0.011404389449117482,"score_gpt":0.24631318929289298,"score_spread":0.2349087998437755,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152554511","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.48834372,0.000382182,0.50278723,0.00033865185,0.001174838,0.00013290845,0.000009903915,0.00024392987,0.0065866546],"genre_scores_gemma":[0.9914803,0.000023714885,0.008173653,0.000098640936,0.00006510574,0.000004499698,0.000023930084,0.000011848924,0.00011831976],"study_design_codex":"design_other","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9995718,0.00001699426,0.00012998033,0.00006562432,0.000115308314,0.000100321995],"domain_scores_gemma":[0.9998208,0.000037098915,0.000018469702,0.000059239857,0.000018585059,0.000045755925],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000094293,0.00005205818,0.00009052563,0.000038724178,0.000019381481,0.0000035832531,0.000053791726,0.00013044366,0.00028866727],"category_scores_gemma":[0.00011962118,0.000051561103,0.000017501658,0.00006062167,0.000039731272,0.000023022254,0.000008354764,0.00010245159,0.000024434765],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000179943,0.0001927182,0.0003360233,0.00033402108,0.000068784415,0.00006895252,0.0010547141,0.01530289,0.17550552,0.0074854866,0.049916826,0.74971604],"study_design_scores_gemma":[0.0037230318,0.0005077124,0.0010706455,0.0004258977,0.000118051685,0.00022158485,0.00012454772,0.7849033,0.13414167,0.0046116705,0.06926959,0.00088233355],"about_ca_topic_score_codex":0.000010248661,"about_ca_topic_score_gemma":0.0000058076716,"teacher_disagreement_score":0.7696004,"about_ca_system_score_codex":0.000049286704,"about_ca_system_score_gemma":0.000035993588,"threshold_uncertainty_score":0.3160704},"labels":[],"label_agreement":null},{"id":"W2152749930","doi":"10.1080/mmy.40.2.143.151","title":"<i>Chrysosporium</i>anamorph of<i>Nannizziopsis vriesii</i>associated with fatal cutaneous mycoses in the salt-water crocodile (<i>Crocodylus porosus</i>)","year":2002,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Infectious Diseases and Mycology","field":"Veterinary","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; University of Alberta","keywords":"Crocodylus; Crocodile; Hatchling; Chrysosporium; Biology; Salt water; Zoology; Veterinary medicine; Ecology; Botany; Medicine; Hatching","score_opus":0.01992025109446214,"score_gpt":0.2565903170199337,"score_spread":0.23667006592547155,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152749930","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.986815,0.0005235888,0.000058527374,0.0018473088,0.0004979383,0.000735071,0.00010102904,0.00015250842,0.009269056],"genre_scores_gemma":[0.99437386,0.00017862915,0.000042012074,0.0044824868,0.00022777547,0.00022116228,0.00010974701,0.00005830562,0.0003060065],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9959599,0.0007172402,0.0008107168,0.0006029694,0.0007620497,0.0011471558],"domain_scores_gemma":[0.99762946,0.0011498554,0.00022883274,0.00056869735,0.00015570699,0.00026746883],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00066521316,0.0004140331,0.0008338707,0.00021847372,0.00023664562,0.000027443908,0.0007657259,0.0006160613,0.01250338],"category_scores_gemma":[0.00076802395,0.00025098136,0.00018318534,0.00054732757,0.0008532276,0.00012389818,0.00023273786,0.00076204696,0.00024646876],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011978935,0.028872604,0.33412284,0.0011800091,0.0036854292,0.23120461,0.040453732,0.0003431428,0.041659527,0.01334505,0.28066108,0.012493038],"study_design_scores_gemma":[0.04588693,0.074400805,0.24421567,0.0012299328,0.0036106405,0.120305724,0.0059437854,0.004227805,0.0077813813,0.0068067308,0.47787192,0.007718664],"about_ca_topic_score_codex":0.0005552141,"about_ca_topic_score_gemma":0.00096371176,"teacher_disagreement_score":0.19721086,"about_ca_system_score_codex":0.00014132675,"about_ca_system_score_gemma":0.00014413722,"threshold_uncertainty_score":0.9999942},"labels":[],"label_agreement":null},{"id":"W2153340107","doi":"10.1080/mmy.40.6.573.580","title":"Arachnomyces kanei (anamorph<i>Onychocola kanei</i>) sp. nov., from human nails","year":2002,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Toronto; Sunnybrook Health Science Centre; University of Alberta","funders":"","keywords":"Biology; Ascocarp; Nail (fastener); Fungus; Phylogenetic tree; Botany; Taxonomy (biology); Genetics","score_opus":0.013150780302455183,"score_gpt":0.2386571100843697,"score_spread":0.22550632978191454,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153340107","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98512477,0.0030176067,0.00017873109,0.00087555574,0.000464436,0.0002442662,0.0005439242,0.000053454067,0.009497259],"genre_scores_gemma":[0.99281645,0.0004636602,0.00023237393,0.003441611,0.0010771094,0.00007267608,0.0007220144,0.000027935715,0.0011461725],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99802953,0.00014506635,0.00036961804,0.00061255024,0.00032880655,0.00051442045],"domain_scores_gemma":[0.9988587,0.000080662765,0.00010583642,0.00044480452,0.00004847316,0.00046154094],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017435825,0.00025571065,0.00033658333,0.00006160971,0.00016044333,0.000026151822,0.0005014556,0.000551303,0.0058736647],"category_scores_gemma":[0.0003856558,0.00022985373,0.00015289595,0.00010464946,0.0002927376,0.000005364358,0.0001899975,0.00026110688,0.00032924346],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000078494726,0.0005429837,0.028957207,0.00002155868,0.0001528435,0.0006486174,0.00003244229,0.000002626107,0.8554132,0.0003031796,0.10854557,0.0053012664],"study_design_scores_gemma":[0.002657364,0.0010246651,0.09823973,0.000057996156,0.00016887637,0.00026799165,0.000066525754,0.00038070796,0.0116769625,0.000495239,0.88404477,0.0009191695],"about_ca_topic_score_codex":0.00010063566,"about_ca_topic_score_gemma":0.00019231458,"teacher_disagreement_score":0.84373623,"about_ca_system_score_codex":0.00001569083,"about_ca_system_score_gemma":0.00005423483,"threshold_uncertainty_score":0.9950351},"labels":[],"label_agreement":null},{"id":"W2158411321","doi":"10.1080/13693780400005916","title":"Subcutaneous phaeohyphomycosis caused by<i>Lasiodiplodia theobromae</i>and successfully treated surgically","year":2004,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"St Joseph's Health Centre","funders":"","keywords":"Phaeohyphomycosis; Chromoblastomycosis; Lasiodiplodia theobromae; Medicine; Biopsy; Debridement (dental); Mycosis; Surgery; Biology; Pathology; Horticulture","score_opus":0.0041345780051962495,"score_gpt":0.21413829911775198,"score_spread":0.21000372111255572,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158411321","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99522156,0.0018821642,0.00019064557,0.00072273496,0.00013108819,0.00018009768,0.00047927682,0.000045089848,0.0011473609],"genre_scores_gemma":[0.9958285,0.0016295395,0.0000639568,0.0014571077,0.00014000986,0.00003867229,0.0005622631,0.000024544615,0.0002554123],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983652,0.00012634935,0.0002771909,0.0005147684,0.00026005137,0.00045641756],"domain_scores_gemma":[0.9990479,0.00008762746,0.000065680266,0.00023680857,0.0000540903,0.00050794444],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017293484,0.00023655257,0.00031060522,0.000041719093,0.00011749424,0.000020501177,0.0002523556,0.00045653057,0.0003569384],"category_scores_gemma":[0.0003634646,0.0001948285,0.0000955305,0.00010200042,0.00033467464,0.0000034213044,0.00014288581,0.00016083324,0.000038413044],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005443284,0.0004856629,0.016521221,0.000029781344,0.00014926329,0.0018278757,0.000027604496,0.00000635076,0.9718188,0.00041528,0.0056218333,0.0025520176],"study_design_scores_gemma":[0.02405427,0.011444484,0.142518,0.0002266141,0.00080352946,0.009828999,0.0001434782,0.00013973902,0.240439,0.002502283,0.5643702,0.0035293573],"about_ca_topic_score_codex":0.00008081347,"about_ca_topic_score_gemma":0.00013641652,"teacher_disagreement_score":0.7313798,"about_ca_system_score_codex":0.000019576079,"about_ca_system_score_gemma":0.00018786686,"threshold_uncertainty_score":0.7944876},"labels":[],"label_agreement":null},{"id":"W2158436147","doi":"10.1080/13693780802238834","title":"The characteristics of<i>Aspergillus fumigatus</i>mycetoma development: is this a biofilm?","year":2008,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":135,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York Central Hospital","funders":"","keywords":"Biofilm; Aspergillus fumigatus; Microbiology; Fungus; Biology; Pathogenic fungus; Population; Bacteria; Botany","score_opus":0.035197297525472564,"score_gpt":0.33636543410725206,"score_spread":0.3011681365817795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158436147","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005502544,0.9932088,0.000017186805,0.00048278697,0.00078452873,0.0007945981,0.000053011852,0.000055100907,0.004053721],"genre_scores_gemma":[0.00037184593,0.9933822,0.00020764479,0.0009467316,0.00042096,0.00009670433,0.0001352971,0.000054391356,0.004384188],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99566436,0.00031974178,0.0016907887,0.0006103168,0.0010237462,0.0006910511],"domain_scores_gemma":[0.9965101,0.0013977042,0.00055302086,0.00082249293,0.00022485577,0.0004918659],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007452883,0.0005032719,0.0031408675,0.00014078258,0.0002852917,0.0000089134855,0.000595532,0.0014051435,0.0029613788],"category_scores_gemma":[0.0029852923,0.00028416954,0.00068046636,0.00045985956,0.0013159215,0.000020250041,0.00024157367,0.0013689908,0.00061566423],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000806266,0.00017095337,0.0003906154,0.0061070393,0.00038195154,0.00052909955,0.00015612588,1.2077285e-10,0.0000013813097,0.00015371937,0.02054387,0.9714846],"study_design_scores_gemma":[0.00035913195,0.00020757361,0.0014979953,0.004480715,0.00038982724,0.000782043,0.000012265451,0.0000011326799,0.0000060598654,0.000009789057,0.9920146,0.00023889342],"about_ca_topic_score_codex":0.00001279234,"about_ca_topic_score_gemma":0.000018493649,"teacher_disagreement_score":0.9714707,"about_ca_system_score_codex":0.00021200247,"about_ca_system_score_gemma":0.004373851,"threshold_uncertainty_score":0.999961},"labels":[],"label_agreement":null},{"id":"W2158943156","doi":"10.3109/13693786.2012.676739","title":"Serum galactomannan in cystic fibrosis patients colonized with<i>Aspergillus</i>species","year":2012,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Cystic Fibrosis Research Advances","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"Hospital for Sick Children","keywords":"Galactomannan; Cystic fibrosis; Aspergillus; Microbiology; Aspergillosis; Medicine; Internal medicine; Biology; Pathology; Gastroenterology; Immunology","score_opus":0.009805986905527177,"score_gpt":0.28103447054805913,"score_spread":0.27122848364253194,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158943156","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9899408,0.0007726899,0.00008033183,0.0029967597,0.00032946584,0.00074270135,0.0000252687,0.00008700382,0.0050249635],"genre_scores_gemma":[0.99553496,0.00008182534,0.0015005792,0.0008030187,0.00025571257,0.0002143158,0.00006356891,0.000035401492,0.0015106386],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99677104,0.00023826364,0.00043862688,0.0003361461,0.0011134164,0.0011024985],"domain_scores_gemma":[0.99770546,0.0008860653,0.00008118057,0.00030849286,0.00014413186,0.00087464444],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005616234,0.00022919416,0.0006296164,0.0002617374,0.000072175506,0.000010616218,0.00021063215,0.0002716248,0.012138841],"category_scores_gemma":[0.0042209784,0.00016451225,0.000064893575,0.00055372703,0.0005854141,0.00015133084,0.00016188968,0.0005836026,0.0004917682],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002112945,0.0012705759,0.98265725,0.0001835423,0.00005566599,0.00018944465,0.0002683124,0.00000139011,0.0010521476,0.0002551389,0.00524809,0.006705486],"study_design_scores_gemma":[0.005746676,0.001784932,0.85679424,0.00019981289,0.000035351768,0.0000951248,0.00006647822,0.00007070304,0.00054996455,0.00003179683,0.13445929,0.00016564476],"about_ca_topic_score_codex":0.000052292213,"about_ca_topic_score_gemma":0.00014158593,"teacher_disagreement_score":0.1292112,"about_ca_system_score_codex":0.000268466,"about_ca_system_score_gemma":0.00026912903,"threshold_uncertainty_score":0.9887642},"labels":[],"label_agreement":null},{"id":"W2160521739","doi":"10.1093/mmy/myu025","title":"Performance of MycAssay Aspergillus DNA real-time PCR assay compared with the galactomannan detection assay for the diagnosis of invasive aspergillosis from serum samples","year":2014,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier universitaire de Québec; Hôtel-Dieu de Québec; Université Laval","funders":"Pfizer","keywords":"Galactomannan; Aspergillosis; Aspergillus; Polymerase chain reaction; Gold standard (test); Biology; Real-time polymerase chain reaction; Confidence interval; Medicine; Microbiology; Gastroenterology; Internal medicine; Immunology; Gene; Biochemistry","score_opus":0.020195137273179026,"score_gpt":0.2590445015565602,"score_spread":0.2388493642833812,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2160521739","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99215364,0.00010395854,0.0014452486,0.0042985636,0.00018101088,0.0008284944,0.00006838918,0.000038640854,0.0008820676],"genre_scores_gemma":[0.9981291,0.00044340434,0.00019534642,0.00055592816,0.00023279886,0.00021355959,0.00004056693,0.000028505752,0.00016074516],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9972547,0.0005951003,0.00058053964,0.0004099757,0.00075146894,0.00040817334],"domain_scores_gemma":[0.98760533,0.010823335,0.00034222577,0.0006711892,0.00037429287,0.00018364443],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0023841476,0.00024190295,0.0008430335,0.00007156195,0.00022368444,0.0000071899526,0.00038158573,0.0003178466,0.0011046324],"category_scores_gemma":[0.00459129,0.00012140757,0.00020411798,0.00027432293,0.0010451641,0.000058435646,0.00008630587,0.00035336553,0.000017483104],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003373136,0.00054819166,0.92396677,0.00043089627,0.0006741057,0.000008787876,0.0007351638,0.00002548525,0.045516904,0.00024207938,0.0034030431,0.021075452],"study_design_scores_gemma":[0.0019628413,0.0019704727,0.9315664,0.0002298001,0.0004476093,0.000011809681,0.00035351777,0.0061442764,0.055069976,0.0000715318,0.0020212724,0.00015049649],"about_ca_topic_score_codex":0.0006101014,"about_ca_topic_score_gemma":0.0030999978,"teacher_disagreement_score":0.020924956,"about_ca_system_score_codex":0.000083580686,"about_ca_system_score_gemma":0.00026444247,"threshold_uncertainty_score":0.9998085},"labels":[],"label_agreement":null},{"id":"W2164181596","doi":"10.1080/13693780600930186","title":"Successful treatment of invasive<i>Rhizopus</i>infection in a child with thalassemia","year":2006,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de Santé Publique du Québec; McGill University Health Centre; Montreal Children's Hospital","funders":"","keywords":"Rhizopus; Amphotericin B; Thalassemia; Treatment modality; Medicine; Modalities; Mucormycosis; Surgery; Biology; Internal medicine; Dermatology; Antifungal","score_opus":0.006694850665059145,"score_gpt":0.2609317496478939,"score_spread":0.25423689898283475,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2164181596","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9863694,0.00024142413,0.000083004416,0.0014657826,0.00007185009,0.00031293728,0.0000026518553,0.00002592107,0.011427065],"genre_scores_gemma":[0.99892974,0.0003543757,0.000075504795,0.00014899211,0.00013641772,0.000036969435,0.00002774476,0.000009590352,0.00028066442],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988186,0.00007739276,0.00030745633,0.00025270815,0.00030128786,0.00024256903],"domain_scores_gemma":[0.99935913,0.000213778,0.0000708658,0.00019248614,0.000053944103,0.00010978319],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001602416,0.00012213438,0.00044830277,0.000108066575,0.000028306797,0.0000020318869,0.000043884625,0.00021014082,0.00072282495],"category_scores_gemma":[0.00021758943,0.00007986581,0.0000662576,0.00025177095,0.00024370603,0.000032975913,0.000011990443,0.00015387611,0.00001575397],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00063284364,0.001152663,0.99426246,0.000082871484,0.000026334083,0.0005978923,0.000051109528,0.00000219849,0.00095218397,0.0003779078,0.00030902794,0.0015525327],"study_design_scores_gemma":[0.0031308266,0.0021704892,0.98786753,0.00014853627,0.0000511787,0.00023684824,0.00003935722,0.000019612726,0.004729752,0.0001620225,0.0013741426,0.00006967536],"about_ca_topic_score_codex":0.003463646,"about_ca_topic_score_gemma":0.024314024,"teacher_disagreement_score":0.020850377,"about_ca_system_score_codex":0.00016648076,"about_ca_system_score_gemma":0.0003269756,"threshold_uncertainty_score":0.9934897},"labels":[],"label_agreement":null},{"id":"W2166474022","doi":"10.1080/13693780802210734","title":"Association between fertility and molecular sub-type of global isolates of<i>Cryptococcus gattii</i>molecular type VGII","year":2008,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Cryptococcus gattii; Biology; Cryptococcosis; Type (biology); Mating type; Microbiology; Genetics; Gene; Ecology","score_opus":0.017640535530673282,"score_gpt":0.2996524648331344,"score_spread":0.2820119293024611,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2166474022","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954422,0.0013584223,0.00018934351,0.0013915007,0.00020952786,0.00020503893,0.000009404921,0.00002324706,0.0011713271],"genre_scores_gemma":[0.9992031,0.00023615593,0.00016323554,0.0003143564,0.00003779265,0.0000056656168,0.000010068885,0.000006417585,0.000023209941],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988686,0.00011689315,0.00034565033,0.0001841107,0.00027805794,0.00020670237],"domain_scores_gemma":[0.9990574,0.00022941924,0.00011656618,0.00014094458,0.00031340364,0.00014226534],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029714298,0.000107465414,0.00051666325,0.000037960916,0.000052187617,0.0000012258706,0.000053065498,0.00028915243,0.00016071968],"category_scores_gemma":[0.00228436,0.00009068903,0.00006971465,0.0003311583,0.00027262745,0.000016760221,0.00007499565,0.00019617974,0.000010549686],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018354782,0.00015227165,0.97448725,0.00007820559,0.00037069825,0.00006193327,0.00004959234,5.6420487e-7,0.022783544,0.00021172443,0.0010692991,0.0005513766],"study_design_scores_gemma":[0.0008354226,0.0011488075,0.9873785,0.000032799013,0.00020959006,0.000035050885,0.000011815463,0.000025323965,0.008978441,0.000444568,0.0008293858,0.00007032611],"about_ca_topic_score_codex":0.00011179005,"about_ca_topic_score_gemma":0.000015625174,"teacher_disagreement_score":0.0138051035,"about_ca_system_score_codex":0.00008505004,"about_ca_system_score_gemma":0.00017057674,"threshold_uncertainty_score":0.3698191},"labels":[],"label_agreement":null},{"id":"W2166738819","doi":"10.3109/13693786.2011.584074","title":"Disseminated sporotrichosis in a patient with hairy cell leukemia treated with amphotericin B and posaconazole","year":2012,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; McMaster University; University of Toronto","funders":"","keywords":"Sporotrichosis; Sporothrix schenckii; Posaconazole; Amphotericin B; Sporothrix; Medicine; Leukemia; Hairy cell leukemia; Malignancy; Immunology; Dermatology; Pathology; Antifungal","score_opus":0.0044801554704070445,"score_gpt":0.22409535801090802,"score_spread":0.219615202540501,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2166738819","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994565,0.0007328648,0.000034035707,0.00052407,0.000051447732,0.00028218626,0.0000025915194,0.000037945705,0.0037698627],"genre_scores_gemma":[0.99860764,0.00016753637,0.00028740507,0.0005910051,0.000042425458,0.00008258416,0.000012515375,0.000013762998,0.00019513583],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99905574,0.000047910566,0.00018652434,0.00018092825,0.00018449675,0.0003444085],"domain_scores_gemma":[0.9993929,0.00014335757,0.000045292363,0.00010408448,0.00004377916,0.0002705375],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012471588,0.00014195978,0.00035790785,0.0001344446,0.0000533543,0.0000032238524,0.000026116457,0.00014346819,0.0002767236],"category_scores_gemma":[0.00007986673,0.00008289113,0.000017122331,0.0003414708,0.00019408802,0.00003849819,0.000034160614,0.00026138374,0.000009927669],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007437251,0.00063052686,0.98867077,0.00006762869,0.00006256584,0.0007383679,0.0009314778,0.0000013371734,0.001000508,0.000021962134,0.0011718863,0.005959276],"study_design_scores_gemma":[0.003560496,0.0036441032,0.98306,0.00017559475,0.00012322362,0.0012375911,0.0006846753,0.00018676881,0.0020062663,0.0000021595877,0.0051463638,0.00017276318],"about_ca_topic_score_codex":0.00066682266,"about_ca_topic_score_gemma":0.00022627841,"teacher_disagreement_score":0.005786513,"about_ca_system_score_codex":0.00013267189,"about_ca_system_score_gemma":0.000083582716,"threshold_uncertainty_score":0.3380202},"labels":[],"label_agreement":null},{"id":"W2168305899","doi":"10.1080/13693780801938996","title":"An intrafamilial transmission of<i>Arthroderma benhamiae</i>in Canadian porcupines (<i>Erethizon dorsatum</i>) in a Japanese zoo","year":2008,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Bijzonder Onderzoeksfonds UGent; Ministry of Agriculture, Forestry and Fisheries; Chiba University; Ministry of Education, Culture, Sports, Science and Technology","keywords":"Porcupine; Biology; Mating type; Zoology; Veterinary medicine; Genetics; Ecology; Gene; Medicine","score_opus":0.009671307607802335,"score_gpt":0.2810453293959626,"score_spread":0.2713740217881603,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168305899","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944366,0.0007799259,0.0000065648437,0.0031096693,0.00018865826,0.00039988372,0.000016365553,0.000024680692,0.0010376383],"genre_scores_gemma":[0.9972574,0.0007524572,0.00014238337,0.0014886031,0.000118554344,0.00003569429,0.00010559126,0.00002053756,0.00007875487],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979552,0.00017250187,0.00050195033,0.000364139,0.00040481344,0.00060137024],"domain_scores_gemma":[0.99831176,0.000108773114,0.00004923759,0.0002519893,0.00004895174,0.0012292917],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00024811705,0.00019142794,0.00058760337,0.00039570744,0.00004799857,0.0000018555926,0.00014164275,0.0004345342,0.0012223462],"category_scores_gemma":[0.00025838646,0.00015614447,0.00009457675,0.00040316323,0.00027760555,0.00006138159,0.000014209622,0.00038795613,0.000024272817],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013854625,0.0028243759,0.9295282,0.00020099082,0.00007413186,0.020369658,0.003334175,0.000011661797,0.001984735,0.00013592359,0.0011344928,0.03901621],"study_design_scores_gemma":[0.00852895,0.0014834101,0.98226714,0.00023312538,0.00006961271,0.0007728405,0.00017544045,0.0011215397,0.00031968896,0.00015443632,0.004668173,0.00020565369],"about_ca_topic_score_codex":0.23467062,"about_ca_topic_score_gemma":0.25965628,"teacher_disagreement_score":0.052738946,"about_ca_system_score_codex":0.00018086343,"about_ca_system_score_gemma":0.0015424497,"threshold_uncertainty_score":0.99969065},"labels":[],"label_agreement":null},{"id":"W2168415976","doi":"10.1080/13693780701549364","title":"Evaluation of microdilution and disk diffusion methods for antifungal susceptibility testing of dermatophytes","year":2007,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":84,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Sunnybrook Health Science Centre; Mediprobe Research (Canada)","funders":"","keywords":"Broth microdilution; Antifungal; Microbiology; Biology; Minimum inhibitory concentration; Antibiotics","score_opus":0.062117568380527226,"score_gpt":0.44984572066021267,"score_spread":0.38772815227968543,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168415976","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9846213,0.000958253,0.013398541,0.00011615319,0.000107250286,0.0005467147,0.000008318231,0.000009435371,0.00023404739],"genre_scores_gemma":[0.97361803,0.000021699727,0.026224457,0.000048405534,0.000045383746,0.000013292044,0.000020395275,0.0000050236968,0.000003315949],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9988915,0.00018094515,0.00031838726,0.00015890687,0.00030882095,0.00014147293],"domain_scores_gemma":[0.99815214,0.001123996,0.000116101655,0.000106822416,0.00037289935,0.00012804936],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0030424856,0.00006617605,0.0002660909,0.00006314936,0.000031400305,8.2793855e-7,0.000027817083,0.000120339086,0.00009960082],"category_scores_gemma":[0.0074989176,0.00005000347,0.000051442366,0.000104918225,0.00018147827,0.000016548596,0.000030100487,0.000055308818,3.992884e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002366931,0.0004915299,0.4048219,0.00020149037,0.00004919703,0.000002247956,0.000040917843,1.2816916e-7,0.0966867,0.00005618265,0.000030005296,0.497383],"study_design_scores_gemma":[0.0037533997,0.00078095705,0.96540415,0.00008934754,0.00068417686,0.000033188946,0.000048868693,0.0048625926,0.0223163,0.0019210257,0.0000651834,0.000040806954],"about_ca_topic_score_codex":0.000053262236,"about_ca_topic_score_gemma":0.000021412681,"teacher_disagreement_score":0.5605822,"about_ca_system_score_codex":0.000043653446,"about_ca_system_score_gemma":0.00016150279,"threshold_uncertainty_score":0.89774466},"labels":[],"label_agreement":null},{"id":"W2168603069","doi":"10.3109/13693786.2010.512301","title":"Virulence in an insect model differs between mating types in<i>Aspergillus fumigatus</i>","year":2010,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Entomopathogenic Microorganisms in Pest Control","field":"Agricultural and Biological Sciences","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Galleria mellonella; Virulence; Biology; Aspergillus fumigatus; Microbiology; Mating type; Pathogen; Mating; Aspergillus; Fungi imperfecti; Zoology; Genetics; Gene","score_opus":0.015076737456675756,"score_gpt":0.24249586560986494,"score_spread":0.22741912815318918,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168603069","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975186,0.000046260484,0.000018507024,0.0015279448,0.00023390052,0.00017182049,0.000016417218,0.000055423374,0.00041111992],"genre_scores_gemma":[0.9981956,0.000019441051,0.00032409673,0.0010973136,0.00028896474,0.000027012638,0.000024708575,0.0000021325013,0.000020728145],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99824256,0.00019299034,0.0003861033,0.00040114555,0.0002829129,0.00049429113],"domain_scores_gemma":[0.9990509,0.00051622064,0.00006695578,0.00009399913,0.000028017797,0.00024388722],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007962085,0.00015576617,0.00032710287,0.000035946872,0.00006553436,0.00001849284,0.0006043565,0.00046437883,0.0012716805],"category_scores_gemma":[0.0007669088,0.000069373404,0.00004233989,0.00031371057,0.0001865783,0.00009648626,0.00015111937,0.00083106634,0.000045446377],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016444204,0.00010623065,0.2719419,0.000004269295,0.0000028760694,0.00005766797,0.0001264437,0.0000128557585,0.673588,0.00038357268,0.000019705858,0.05374006],"study_design_scores_gemma":[0.00072815095,0.00032738855,0.9800411,0.000032465305,0.000010101797,0.00003198415,0.00005267307,0.0094350185,0.0036147698,0.004912399,0.00048298217,0.0003309906],"about_ca_topic_score_codex":0.0002919826,"about_ca_topic_score_gemma":0.012412198,"teacher_disagreement_score":0.7080992,"about_ca_system_score_codex":0.000037007107,"about_ca_system_score_gemma":0.000044039003,"threshold_uncertainty_score":0.9996413},"labels":[],"label_agreement":null},{"id":"W2170855902","doi":"10.3109/13693786.2011.586133","title":"Adhesion and invasion of<i>Candida albicans</i>from periodontal pockets of patients with chronic periodontitis and diabetes to gingival human fibroblasts","year":2012,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Oral microbiology and periodontitis research","field":"Dentistry","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Candida albicans; Corpus albicans; Microbiology; Periodontitis; Fibroblast; Adhesion; Chronic periodontitis; Biology; Chemistry; In vitro; Medicine; Dentistry; Biochemistry","score_opus":0.00722228911878322,"score_gpt":0.25342573629899423,"score_spread":0.246203447180211,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2170855902","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981258,0.0009327269,0.0000082385595,0.00013463349,0.00025018316,0.00028416014,0.00016890925,0.000014131908,0.00008121185],"genre_scores_gemma":[0.9993172,0.000043000917,0.00019485915,0.00008979592,0.00012571922,0.000017953622,0.00011317375,0.000018717255,0.00007957479],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998391,0.0001853256,0.00033482688,0.00031756397,0.0002891537,0.00048215248],"domain_scores_gemma":[0.99901825,0.00023800383,0.00010277603,0.00018980769,0.00007432007,0.00037685386],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00027233103,0.0001753266,0.0005150786,0.00012791224,0.00013202344,0.0000129415785,0.00018658159,0.00031137269,0.003184615],"category_scores_gemma":[0.00022601712,0.00013974718,0.000041371706,0.00012170526,0.0007453241,0.00012342795,0.00036213934,0.00027307845,0.000020744954],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015967184,0.00013690742,0.9185842,0.000104861436,0.000052792253,0.00001193539,0.0003000424,8.0352685e-8,0.077248484,0.000049643477,0.0005110553,0.0028402824],"study_design_scores_gemma":[0.0015763282,0.00158532,0.98563004,0.0001824889,0.000026862595,0.000016734217,0.000036328023,0.0000037661948,0.008256189,0.000013885428,0.0025247384,0.00014733881],"about_ca_topic_score_codex":0.00055792363,"about_ca_topic_score_gemma":0.0018070576,"teacher_disagreement_score":0.068992294,"about_ca_system_score_codex":0.00004434427,"about_ca_system_score_gemma":0.0000861795,"threshold_uncertainty_score":0.9977266},"labels":[],"label_agreement":null},{"id":"W2322886270","doi":"10.1093/mmy/myv026","title":"The use of biomarkers and molecular methods for the earlier diagnosis of invasive aspergillosis in immunocompromised patients","year":2015,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"","keywords":"Galactomannan; Aspergillosis; Intensive care medicine; Medicine; Molecular diagnostics; Clinical diagnosis; Diagnostic test; Diagnostic accuracy; Pathology; Immunology; Internal medicine; Bioinformatics; Biology; Pediatrics","score_opus":0.10454597329660718,"score_gpt":0.42685594389456605,"score_spread":0.32230997059795885,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2322886270","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.004111505,0.9922821,0.00019604195,0.000369921,0.0001969889,0.0027654322,0.000039245188,0.000004136697,0.000034624467],"genre_scores_gemma":[0.00077910133,0.99637663,0.0019241213,0.0001589461,0.000018899433,0.000658751,0.000034115303,0.00002380461,0.000025613985],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9970667,0.0010590447,0.00094026385,0.0003117931,0.00035378282,0.0002684617],"domain_scores_gemma":[0.9843402,0.014335647,0.00039348713,0.0004988631,0.0002873706,0.00014446277],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0024019456,0.00022511632,0.0017733529,0.000102060076,0.000048754588,0.0000053710583,0.00028744742,0.0005201533,0.00006120327],"category_scores_gemma":[0.018967213,0.00010710211,0.00037275054,0.00028326412,0.0010332351,0.000019959554,0.00017074842,0.00037091406,9.697876e-7],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028262805,0.00020261965,0.00630945,0.004276594,0.0006005952,0.0000074686723,0.00005672698,2.7219922e-8,0.000007555672,0.00006563825,0.00094568625,0.987245],"study_design_scores_gemma":[0.0017615451,0.00069652335,0.0079680765,0.0036713353,0.001410312,0.0000051459615,0.000050781564,0.00002128287,0.000043630193,0.00010754378,0.9841352,0.00012863411],"about_ca_topic_score_codex":0.00011222923,"about_ca_topic_score_gemma":0.00006958804,"teacher_disagreement_score":0.9871164,"about_ca_system_score_codex":0.000087690096,"about_ca_system_score_gemma":0.00075766357,"threshold_uncertainty_score":0.98929644},"labels":[],"label_agreement":null},{"id":"W2343776672","doi":"10.1093/mmy/myw013","title":"The ZIP family zinc transporters support the virulence of<i>Cryptococcus neoformans</i>","year":2016,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Cryptococcus neoformans; Virulence; Microbiology; Cryptococcus; Biology; Zinc; Transporter; Chemistry; Genetics; Gene","score_opus":0.011881340254261373,"score_gpt":0.2694471938768421,"score_spread":0.2575658536225807,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2343776672","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.86783385,0.0009781418,0.003031025,0.08742486,0.0023155909,0.00092374487,0.000025826614,0.00010200842,0.03736495],"genre_scores_gemma":[0.9927675,0.002180679,0.000026939995,0.00363788,0.00019556707,0.00009972032,0.0000016538809,0.00000910035,0.0010809539],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987223,0.000069325586,0.0003602637,0.00015477707,0.0003510924,0.00034223127],"domain_scores_gemma":[0.99852365,0.00090695795,0.00006869983,0.000284096,0.000082171544,0.0001344015],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007045932,0.00011068856,0.00027313342,0.00003197416,0.00023982507,0.000003091637,0.0002008963,0.00013217641,0.00068965124],"category_scores_gemma":[0.0003910649,0.0000396075,0.00012144639,0.00013778651,0.0011730702,0.00002805246,0.00004460302,0.00022613481,0.00010488293],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014034666,0.00077318447,0.14765972,0.00019039158,0.0010129752,0.00053726556,0.0020942446,0.0000010357865,0.057019252,0.038496744,0.27706409,0.47374764],"study_design_scores_gemma":[0.0015258152,0.0011747559,0.22850499,0.000076844146,0.000117276446,0.00015784483,0.0003040639,0.0000139708945,0.000962659,0.0005483907,0.7665163,0.00009708235],"about_ca_topic_score_codex":0.000050943938,"about_ca_topic_score_gemma":0.000081650345,"teacher_disagreement_score":0.4894522,"about_ca_system_score_codex":0.000028674274,"about_ca_system_score_gemma":0.00020036433,"threshold_uncertainty_score":0.75511974},"labels":[],"label_agreement":null},{"id":"W2489283315","doi":"10.1093/mmy/myw052","title":"(1,3) β-D-Glucan in Bronchoalveolar Lavage of Lung Transplant Recipients for the Diagnosis of Invasive Pulmonary Aspergillosis","year":2016,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto; University Health Network; University of Alberta","funders":"Coordenação de Aperfeiçoamento de Pessoal de Nível Superior","keywords":"Bronchoalveolar lavage; Medicine; Lung transplantation; Galactomannan; Aspergillosis; Lung; Transplantation; Internal medicine; Gastroenterology; Pathology; Immunology","score_opus":0.01853701727889445,"score_gpt":0.29622720289681176,"score_spread":0.2776901856179173,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2489283315","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9916461,0.00095056265,0.0003738925,0.0056613134,0.00021520852,0.00064205524,0.00008127457,0.000008616736,0.00042097503],"genre_scores_gemma":[0.9961248,0.0029336591,0.000070480404,0.0004310068,0.00007067823,0.00017000432,0.000009499783,0.000012005744,0.00017789032],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99836916,0.00013127596,0.0005409325,0.00026575924,0.00039275468,0.00030012385],"domain_scores_gemma":[0.99554366,0.0037886568,0.00011476906,0.00030304448,0.00010408442,0.00014578878],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00084050844,0.00011858415,0.0005253196,0.000090939735,0.000032516364,8.0548335e-7,0.00022407962,0.00024880777,0.0010891416],"category_scores_gemma":[0.003061046,0.0000612443,0.00017159447,0.00014409257,0.000529025,0.000034319946,0.00003795966,0.00016829578,0.000004050961],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00102858,0.00045284186,0.97394705,0.00022968178,0.000086772125,0.000052652857,0.00025422638,1.3188847e-7,0.010620345,0.0002521017,0.0010451115,0.012030533],"study_design_scores_gemma":[0.0018060021,0.000530634,0.97951037,0.000717421,0.00012866493,0.000010464365,0.00008438365,0.000032883185,0.01589837,0.00020321933,0.0010060961,0.00007150774],"about_ca_topic_score_codex":0.00017113304,"about_ca_topic_score_gemma":0.00093331654,"teacher_disagreement_score":0.011959025,"about_ca_system_score_codex":0.00007917019,"about_ca_system_score_gemma":0.00027056978,"threshold_uncertainty_score":0.999824},"labels":[],"label_agreement":null},{"id":"W2510638355","doi":"10.1093/mmy/myw064","title":"High frequency of pathogenic<i>Aspergillus</i>species among nonsporulating moulds from respiratory tract samples","year":2016,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Maisonneuve-Rosemont; Centre Hospitalier de l’Université de Montréal; Institut National de Santé Publique du Québec","funders":"","keywords":"Microbiology; Biology; Aspergillus; Aspergillus fumigatus; Pathogenic bacteria; Respiratory tract; Aspergillus flavus; Schizophyllum commune; Respiratory system; Bacteria; Genetics; Botany","score_opus":0.02727842797031881,"score_gpt":0.2750077031827009,"score_spread":0.24772927521238208,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2510638355","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951991,0.00062653574,0.0010085437,0.0011870204,0.00034009916,0.00021785851,0.00013991173,0.00006903431,0.0012119],"genre_scores_gemma":[0.9971696,0.00012156016,0.0010796577,0.0007847157,0.00044790434,0.000017325694,0.000029505649,0.000023804325,0.00032591954],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99740833,0.00021526872,0.0007814092,0.0004805285,0.0006861985,0.00042825798],"domain_scores_gemma":[0.9973427,0.0013914998,0.00021213964,0.00052450167,0.00016014544,0.000368997],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007223045,0.00020227085,0.0007510916,0.00009380053,0.00007484292,0.0000033622646,0.00022379492,0.0005234487,0.010430849],"category_scores_gemma":[0.004735787,0.00012653993,0.00019624081,0.00016727403,0.0010614104,0.000082479615,0.000074228585,0.00033930986,0.000052513624],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011375032,0.00019411118,0.7355946,0.00003069705,0.0000475527,0.00019078837,0.000076420074,1.1635807e-7,0.25687528,0.0011357659,0.00039597927,0.0053449674],"study_design_scores_gemma":[0.0016688451,0.00032193225,0.98886925,0.00023201545,0.0000760504,0.000007143696,0.00012293812,0.000003117896,0.005621531,0.0015673673,0.0013709642,0.00013883351],"about_ca_topic_score_codex":0.0005083275,"about_ca_topic_score_gemma":0.00078387815,"teacher_disagreement_score":0.25327468,"about_ca_system_score_codex":0.00011104337,"about_ca_system_score_gemma":0.0003913396,"threshold_uncertainty_score":0.99047375},"labels":[],"label_agreement":null},{"id":"W2512902752","doi":"10.1093/mmy/myw077","title":"<i>Aspergillus</i>arthritis: analysis of clinical manifestations, diagnosis, and treatment of 31 reported cases","year":2016,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Qatar National Research Fund; Astellas Pharma; Sick Kids Foundation; Qatar Foundation; Gilead Sciences","keywords":"Medicine; Aspergillosis; Surgery; Arthritis; Internal medicine; Itraconazole; Gastroenterology; Dermatology; Antifungal; Immunology","score_opus":0.07098487749293951,"score_gpt":0.40508913517064105,"score_spread":0.3341042576777015,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2512902752","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951189,0.0018814761,0.000098025426,0.0021698112,0.00009817727,0.00020913943,0.00005825059,0.000015404123,0.00035077968],"genre_scores_gemma":[0.9782179,0.020984624,0.0002017473,0.0002007059,0.00006157639,0.00003223161,0.000028764425,0.000005485444,0.0002669566],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979781,0.00016508011,0.0010725448,0.0003116778,0.00030612512,0.00016651022],"domain_scores_gemma":[0.9965364,0.0024815816,0.00025546405,0.0003163588,0.00015229151,0.0002579138],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00059195084,0.00010109516,0.0009984666,0.00014121266,0.000024988953,9.75406e-7,0.000043923832,0.00021918865,0.001548111],"category_scores_gemma":[0.0056857574,0.00005898444,0.00023956058,0.0002704306,0.0007483526,0.00002356374,0.000023000508,0.000059802634,0.00000388318],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003268619,0.0009254355,0.90182066,0.00002369252,0.0009696647,0.0012157685,0.000048517257,4.8150092e-8,0.0003190302,0.0002014595,0.0007018716,0.09344701],"study_design_scores_gemma":[0.0021846339,0.0022092923,0.98831815,0.00010659881,0.001370929,0.00012130061,0.00007931586,0.000018978417,0.0004918322,0.000048512476,0.004993986,0.00005650324],"about_ca_topic_score_codex":0.0002235621,"about_ca_topic_score_gemma":0.0014507838,"teacher_disagreement_score":0.0933905,"about_ca_system_score_codex":0.00003193757,"about_ca_system_score_gemma":0.00029538185,"threshold_uncertainty_score":0.9993646},"labels":[],"label_agreement":null},{"id":"W2529204894","doi":"10.1093/mmy/myw086","title":"Epidemiological features of invasive mold infections among solid organ transplant recipients: PATH Alliance<sup>®</sup>registry analysis","year":2016,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"Astellas Pharma Global Development; Chimerix; Pfizer","keywords":"Interquartile range; Medicine; Epidemiology; Aspergillosis; Internal medicine; Antifungal; Surgery; Gastroenterology; Immunology; Dermatology","score_opus":0.016858152972555964,"score_gpt":0.3002671725337635,"score_spread":0.28340901956120756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2529204894","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98961395,0.0002605665,0.004751489,0.003825746,0.00013146932,0.0002914354,0.000075156015,0.00006745433,0.0009827595],"genre_scores_gemma":[0.99568564,0.0017915381,0.00019646762,0.0010725482,0.0001978649,0.00004340869,0.000063307314,0.000013751335,0.00093544746],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9970879,0.00045827826,0.00077891134,0.00060939474,0.000524256,0.00054124603],"domain_scores_gemma":[0.99618006,0.0022910459,0.00021242275,0.00056246604,0.00019824681,0.00055576675],"candidate_categories":["metaresearch","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010663959,0.00024564625,0.001247635,0.00014435872,0.00009348625,0.0000035782036,0.00025213856,0.00074632355,0.0043173786],"category_scores_gemma":[0.010430761,0.00013838899,0.0004570659,0.00063648284,0.001300368,0.00006258245,0.00006325606,0.00054293673,0.000041573618],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036569213,0.00054848654,0.98908955,0.0000657575,0.00072495855,0.00028753592,0.00016973061,0.0000091197435,0.0025667613,0.00038130957,0.0034006315,0.0023904748],"study_design_scores_gemma":[0.001256703,0.00077907817,0.9944517,0.00032598744,0.0007710635,0.00005859088,0.000107298794,0.000076923614,0.0009828012,0.00040675112,0.0006262246,0.00015685026],"about_ca_topic_score_codex":0.00016868411,"about_ca_topic_score_gemma":0.0008283562,"teacher_disagreement_score":0.009364365,"about_ca_system_score_codex":0.0001185088,"about_ca_system_score_gemma":0.00034381577,"threshold_uncertainty_score":0.9979048},"labels":[],"label_agreement":null},{"id":"W2553977523","doi":"10.1093/mmy/myw118","title":"Successful treatment of<i>Aspergillus</i>ventriculitis through voriconazole adaptive pharmacotherapy, immunomodulation, and therapeutic monitoring of cerebrospinal fluid (1→3)-β-D-glucan","year":2016,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Sick Kids Foundation","keywords":"Ventriculitis; Voriconazole; Aspergillosis; Medicine; Pharmacotherapy; Aspergillus; Germinoma; Meningoencephalitis; Cerebrospinal fluid; Therapeutic drug monitoring; Meningitis; Immunology; Internal medicine; Pharmacology; Biology; Surgery; Drug; Microbiology; Chemotherapy","score_opus":0.05153529980488843,"score_gpt":0.3800728267645782,"score_spread":0.3285375269596898,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2553977523","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.015528083,0.98205656,0.0003301667,0.0001168372,0.0005603218,0.0010121263,0.000087024666,0.000026635264,0.00028223157],"genre_scores_gemma":[0.09082002,0.9080477,0.00017916213,0.000035413166,0.00048460884,0.00009747999,0.00002941386,0.000040920506,0.00026528013],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99690205,0.00036105828,0.0011754386,0.00057014875,0.00056233635,0.0004289929],"domain_scores_gemma":[0.9977772,0.00084051234,0.00053147913,0.00041094483,0.00021045117,0.00022938159],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00028340422,0.00046802178,0.00281959,0.00014024576,0.00007362435,0.000004472739,0.00019855116,0.00057318714,0.001544793],"category_scores_gemma":[0.0001414623,0.00028520884,0.00052290765,0.00029647708,0.0006707118,0.000051233015,0.00005247524,0.00024565944,0.000014691347],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041355166,0.00063594565,0.013187236,0.004500865,0.0011849465,0.00008098323,0.00018634147,5.344356e-8,0.00022752352,0.0004766977,0.000042304873,0.9790636],"study_design_scores_gemma":[0.005530474,0.0056128977,0.021130256,0.014974579,0.0027390083,0.00032289108,0.00017270607,0.000007678694,0.0007624611,0.0003261717,0.9478654,0.00055547536],"about_ca_topic_score_codex":0.00015671726,"about_ca_topic_score_gemma":0.000010852163,"teacher_disagreement_score":0.97850806,"about_ca_system_score_codex":0.00034997636,"about_ca_system_score_gemma":0.0010511129,"threshold_uncertainty_score":0.99996},"labels":[],"label_agreement":null},{"id":"W2555121231","doi":"10.1093/mmy/myw117","title":"<i>Aspergillus</i>in chronic lung disease: Modeling what goes on in the airways","year":2016,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Cystic Fibrosis Foundation","keywords":"Allergic bronchopulmonary aspergillosis; Aspergillus; Immunology; Asthma; Aspergillus fumigatus; Aspergillosis; Chronic bronchitis; Medicine; Lung; Disease; Pathogen; Sensitization; Biology; Intensive care medicine; Microbiology; Pathology; Immunoglobulin E; Internal medicine","score_opus":0.045410341967157285,"score_gpt":0.38583172151525047,"score_spread":0.3404213795480932,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2555121231","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000338931,0.99277765,0.000114713504,0.004036433,0.0004835613,0.0012338595,0.000013688473,0.000030368903,0.00097081374],"genre_scores_gemma":[0.011795503,0.9850539,0.0000036113483,0.0016620788,0.00074511557,0.00027436367,0.00007380851,0.000040960967,0.0003506374],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99595875,0.000786868,0.0009413119,0.000757438,0.0008406842,0.00071495556],"domain_scores_gemma":[0.99721503,0.0014911758,0.00012228235,0.00079015375,0.000034610406,0.00034676588],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0017321146,0.00042214218,0.0019544507,0.00024235794,0.00006006594,0.000019788959,0.00055091426,0.0007881767,0.0017417255],"category_scores_gemma":[0.001853782,0.00020564567,0.00045254442,0.00036997627,0.00031963093,0.00008230814,0.00010993569,0.001512984,0.00028170316],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014118914,0.00026815556,0.00015695549,0.010048306,0.000042885284,0.0016518465,0.000061499006,0.000003469294,4.3385126e-7,0.0011664449,0.0014731658,0.98498565],"study_design_scores_gemma":[0.0010594086,0.00021305571,0.0002346266,0.070798635,0.00028376683,0.000043257038,0.00006487558,0.0017863736,7.2783735e-8,0.00026541,0.92496413,0.00028642],"about_ca_topic_score_codex":0.000027327831,"about_ca_topic_score_gemma":0.0004598357,"teacher_disagreement_score":0.98469925,"about_ca_system_score_codex":0.0010359206,"about_ca_system_score_gemma":0.0024404172,"threshold_uncertainty_score":0.99917084},"labels":[],"label_agreement":null},{"id":"W2563759234","doi":"10.1093/mmy/myw134","title":"7th Advances Against Aspergillosis: Basic, diagnostic, clinical and therapeutic studies","year":2016,"lang":"en","type":"editorial","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Aspergillosis; Intensive care medicine; Medicine; Immunology","score_opus":0.027451568921902838,"score_gpt":0.40631536627616127,"score_spread":0.37886379735425846,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2563759234","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.021882439,0.11215967,0.00004027909,0.0072159,0.85511094,0.000769511,0.000112396425,0.00014987428,0.002558986],"genre_scores_gemma":[0.05755429,0.2963599,0.000050218398,0.002965275,0.6410056,0.00012267249,0.00006761883,0.000061820596,0.0018126152],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.994939,0.00062388385,0.001172877,0.0011297369,0.0014506117,0.0006838359],"domain_scores_gemma":[0.9654689,0.032154787,0.0003205968,0.00069869094,0.00057950604,0.0007775192],"candidate_categories":["metaresearch","metaepi_narrow","sts","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0022716583,0.0005011929,0.002204025,0.00011163129,0.00014825909,0.000011617275,0.0003133199,0.0024698828,0.0006754888],"category_scores_gemma":[0.08335843,0.0003023307,0.00030692405,0.00011593983,0.0032053315,0.000052763742,0.00027269076,0.0019506662,0.00016702774],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00064586167,0.00031330204,0.04890505,0.0006186632,0.00071284536,0.0006916227,0.000058790163,9.3341e-9,0.000011368223,0.00010060611,0.8252299,0.12271199],"study_design_scores_gemma":[0.0029819864,0.0017687312,0.016993592,0.0012712809,0.0005395121,0.000010993049,0.00014307535,0.0000020292562,0.000007755689,0.0007847968,0.9751743,0.00032195554],"about_ca_topic_score_codex":0.00000581972,"about_ca_topic_score_gemma":0.00017071662,"teacher_disagreement_score":0.21410537,"about_ca_system_score_codex":0.00012570553,"about_ca_system_score_gemma":0.0012347205,"threshold_uncertainty_score":0.9999429},"labels":[],"label_agreement":null},{"id":"W2606196206","doi":"10.1093/mmy/myx017","title":"Diabetes mellitus as the major risk factor for mucormycosis in Mexico: Epidemiology, diagnosis, and outcomes of reported cases","year":2017,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":197,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Universidad Nacional Autónoma de México; Sick Kids Foundation; Wellcome Trust","keywords":"Mucormycosis; Epidemiology; Diabetes mellitus; Risk factor; Medicine; Intensive care medicine; Internal medicine; Surgery; Endocrinology","score_opus":0.060352455069831654,"score_gpt":0.3849286850694249,"score_spread":0.32457622999959324,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2606196206","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9758139,0.00307555,0.000033888336,0.019826256,0.0002543218,0.00074570946,0.000097048025,0.000016459382,0.00013686782],"genre_scores_gemma":[0.99520046,0.002221864,0.00021435913,0.001957089,0.000067680776,0.00022147928,0.000009271677,0.00001202627,0.00009574643],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99784076,0.0003250374,0.0007949452,0.00039690497,0.00021163259,0.00043073375],"domain_scores_gemma":[0.9860209,0.012445086,0.00048719556,0.00071748806,0.000094150986,0.00023515514],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0025366957,0.00016830057,0.0010456677,0.000063294574,0.00021678535,0.000006050215,0.0002444928,0.00037268753,0.00052815117],"category_scores_gemma":[0.13991894,0.0000953782,0.00016956942,0.000047624795,0.0013521436,0.000045595574,0.00012855537,0.00036938253,0.0000052526298],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001951863,0.0001909873,0.9782779,0.000098430886,0.00017058662,0.000078701305,0.000092789436,3.404983e-8,0.00006936162,0.00029631788,0.0007071446,0.019822514],"study_design_scores_gemma":[0.0014061319,0.00062228285,0.9916482,0.000073790456,0.00019137742,0.000022916172,0.00007859892,0.00006197114,0.00078332506,0.0026653332,0.0023594617,0.00008659727],"about_ca_topic_score_codex":0.0012138778,"about_ca_topic_score_gemma":0.0024796515,"teacher_disagreement_score":0.13738224,"about_ca_system_score_codex":0.000037102887,"about_ca_system_score_gemma":0.00018161457,"threshold_uncertainty_score":0.8673259},"labels":[],"label_agreement":null},{"id":"W2614920772","doi":"10.1093/mmy/myx037","title":"Searching for clues for eighteen years: Deciphering the ecological determinants of Cryptococcus gattii on Vancouver Island, British Columbia","year":2017,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Centre for Disease Control; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; British Columbia Lung Association","keywords":"Cryptococcus gattii; Ecology; Geography; Ecological niche; Climate change; Temperate rainforest; Temperate climate; Environmental niche modelling; Niche; Habitat; Cryptococcosis; Biology; Ecosystem","score_opus":0.11382199623170366,"score_gpt":0.42936570174594685,"score_spread":0.31554370551424316,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2614920772","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0053575207,0.97872466,0.00027684207,0.00017183881,0.0038381964,0.008772075,0.0004113865,0.00007066751,0.002376818],"genre_scores_gemma":[0.0010395814,0.991788,0.00046828407,0.00030781084,0.001173655,0.0027967675,0.000031435986,0.000056213852,0.0023382462],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99791676,0.00017041348,0.0007033205,0.0004284626,0.0002928066,0.00048824304],"domain_scores_gemma":[0.99503195,0.003940093,0.00035495945,0.0003829858,0.00012887022,0.00016111071],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010351416,0.00021289873,0.00220325,0.00005694946,0.00044999432,0.00005061958,0.00037306655,0.0006764044,0.00059749687],"category_scores_gemma":[0.0054888795,0.00016705242,0.00065900624,0.00006830368,0.00063701614,0.000021754904,0.00020735711,0.0006071288,0.00001085754],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004236701,0.00021947228,0.00041967497,0.005070872,0.00026878837,0.000113066686,0.000031384345,9.1420205e-8,1.1937365e-7,0.00002065265,0.08112382,0.9126897],"study_design_scores_gemma":[0.0011039213,0.0019309319,0.0019977128,0.0065764943,0.0006204081,0.000148514,0.000020680794,0.000040750227,2.2856044e-7,0.0002473986,0.9871531,0.00015984196],"about_ca_topic_score_codex":0.00069512357,"about_ca_topic_score_gemma":0.063421525,"teacher_disagreement_score":0.9125298,"about_ca_system_score_codex":0.000100276695,"about_ca_system_score_gemma":0.00042388492,"threshold_uncertainty_score":0.9536686},"labels":[],"label_agreement":null},{"id":"W2615907117","doi":"10.1111/j.1365-280x.1998.00129.x","title":"Increased incidence of Trichophyton tonsurans tinea capitis in Ontario, Canada between 1985 and 1996","year":2008,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Ministry of Health and Long Term Care; University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Trichophyton tonsurans; Tinea capitis; Microsporum canis; Medicine; Incidence (geometry); Dermatology; Trichophyton; Microsporum; Dermatophyte; Antifungal","score_opus":0.01141658485908501,"score_gpt":0.24071928460397865,"score_spread":0.22930269974489365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2615907117","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99760693,0.00048503894,0.0000030668753,0.0007502372,0.00008040241,0.00021867768,0.000026394662,0.000008326856,0.00082090526],"genre_scores_gemma":[0.99890596,0.00012755807,0.00007074766,0.0005858896,0.00004738355,0.00001993353,0.000057776448,0.00000755496,0.0001772078],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998781,0.000068121546,0.0003194187,0.00020787593,0.00038122697,0.00024233318],"domain_scores_gemma":[0.9989794,0.00036203262,0.000058906975,0.00013726846,0.000036973193,0.00042544265],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00010455378,0.00011117363,0.00047211192,0.00008974078,0.00003480495,7.997586e-7,0.00006809972,0.00013434664,0.0011022912],"category_scores_gemma":[0.0004653975,0.00009249202,0.00003463628,0.00015459841,0.0001826263,0.000019592579,0.00003788921,0.00023338503,0.0000032683915],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014104511,0.00015086486,0.9933773,0.000030669777,0.000049179544,0.0030989163,0.000094803356,9.589839e-8,0.00004316722,0.000009543845,0.00098748,0.0020168838],"study_design_scores_gemma":[0.003783288,0.0003450237,0.9935293,0.00006275566,0.00007866362,0.00019646222,0.00001390591,0.000009431692,0.0001147049,0.000033098906,0.0017656632,0.00006768568],"about_ca_topic_score_codex":0.98997885,"about_ca_topic_score_gemma":0.9871713,"teacher_disagreement_score":0.0036422429,"about_ca_system_score_codex":0.0002587723,"about_ca_system_score_gemma":0.002723811,"threshold_uncertainty_score":0.9998108},"labels":[],"label_agreement":null},{"id":"W2753143907","doi":"10.1093/mmy/myx065","title":"Attempted molecular detection of the thermally dimorphic human fungal pathogen Emergomyces africanus in terrestrial small mammals in South Africa","year":2017,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Biology; Fungus; Insectivore; Zoology; Sexual dimorphism; Dimorphic fungus; Pathogen; Botany; Ecology; Microbiology; Genetics; Yeast; Predation","score_opus":0.034799319930480896,"score_gpt":0.2832368830041,"score_spread":0.24843756307361908,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2753143907","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939062,0.0002673675,0.000032411397,0.0014859025,0.0005115581,0.00041060528,0.000005578067,0.000017436936,0.0033629257],"genre_scores_gemma":[0.99947006,0.000018803968,0.000018123335,0.00010826555,0.00017566081,0.0000864095,0.0000019228823,0.000013209849,0.00010757827],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983641,0.00028452993,0.00047116211,0.0002628083,0.00029159538,0.0003257875],"domain_scores_gemma":[0.99909973,0.00012255408,0.0002153088,0.00043341363,0.000031929387,0.00009708734],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00065268687,0.0001489199,0.00046985844,0.00016524178,0.00019967712,0.0000095491005,0.00028565858,0.0002699211,0.00013482894],"category_scores_gemma":[0.0018684472,0.00009895294,0.00012552865,0.0001797163,0.0004431673,0.000024515046,0.00021162684,0.0005083399,0.0000066300936],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005025081,0.0005940279,0.70151764,0.000067884146,0.00014234583,0.0008657051,0.0025722298,0.0000077994655,0.28772965,0.00020388588,0.0000564943,0.0057398365],"study_design_scores_gemma":[0.0030455638,0.0006461013,0.99129885,0.00013082754,0.00006928757,0.000044494234,0.00020909481,0.00013346713,0.0032548998,0.00022279301,0.000825045,0.00011954185],"about_ca_topic_score_codex":0.0005826237,"about_ca_topic_score_gemma":0.0028139893,"teacher_disagreement_score":0.28978124,"about_ca_system_score_codex":0.00006750465,"about_ca_system_score_gemma":0.0001220126,"threshold_uncertainty_score":0.40351838},"labels":[],"label_agreement":null},{"id":"W2761770213","doi":"10.1093/mmy/myx073","title":"The mitochondrial ABC transporter Atm1 plays a role in iron metabolism and virulence in the human fungal pathogen Cryptococcus neoformans","year":2017,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; Northeastern University; National Research Foundation of Korea; National Natural Science Foundation of China; Ministry of Science, ICT and Future Planning; National Research Foundation","keywords":"Cryptococcus neoformans; Biology; Virulence; Saccharomyces cerevisiae; Mutant; Mitochondrion; Biochemistry; ATP-binding cassette transporter; Microbiology; Fungal protein; Yeast; Cytosol; Transporter; Enzyme; Gene","score_opus":0.012818662457000455,"score_gpt":0.29366077396046925,"score_spread":0.28084211150346877,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2761770213","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9864888,0.0008672421,0.00001905804,0.007444709,0.00047359668,0.00054398127,0.000008381622,0.0000121271305,0.0041421056],"genre_scores_gemma":[0.9977362,0.0005421718,0.000032900887,0.0008344064,0.00049372454,0.00024939462,0.0000043876917,0.0000081605285,0.00009864443],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99867576,0.00013621565,0.00032205015,0.00022298793,0.0002658352,0.00037717214],"domain_scores_gemma":[0.99917585,0.00028634927,0.00007019508,0.0003476274,0.000022785549,0.00009721656],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006924705,0.00013624721,0.00033399792,0.000058091347,0.00069714524,0.00003139618,0.0002682584,0.00020221359,0.00014334408],"category_scores_gemma":[0.0003883898,0.000069934205,0.0000621419,0.000061620514,0.0006517333,0.000061972874,0.00007079143,0.00060170505,0.000013921248],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001456999,0.0014673637,0.8515757,0.00016579771,0.00022230009,0.002927905,0.0218272,0.0000045963834,0.04301794,0.023241237,0.0053788866,0.048714112],"study_design_scores_gemma":[0.0024543388,0.00029142675,0.9587157,0.00004062097,0.000054544504,0.00010180956,0.0005147691,0.0000806461,0.00004181532,0.0009893128,0.036629412,0.000085608575],"about_ca_topic_score_codex":0.0005028109,"about_ca_topic_score_gemma":0.00590171,"teacher_disagreement_score":0.107140034,"about_ca_system_score_codex":0.000023459617,"about_ca_system_score_gemma":0.00006115257,"threshold_uncertainty_score":0.5361948},"labels":[],"label_agreement":null},{"id":"W2764047600","doi":"10.1093/mmy/myx081","title":"Transcriptional profile of the human skin pathogenic fungus Mucor irregularis in response to low oxygen","year":2017,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Key Research and Development Program of China; National Natural Science Foundation of China","keywords":"Biology; Rhizophagus irregularis; Transcriptome; Microbiology; Fungal protein; Mucor; Cell biology; Gene expression; Gene; Biochemistry; Genetics; Symbiosis; Aspergillus","score_opus":0.00944288361844319,"score_gpt":0.27307653491255385,"score_spread":0.26363365129411065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2764047600","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932653,0.0003427052,0.00009818237,0.004988309,0.00036891084,0.0002604587,0.00004117446,0.0000029848431,0.0006320188],"genre_scores_gemma":[0.99767923,0.00007336413,0.00021159071,0.0005615111,0.00015980253,0.00007239733,0.0000128181555,0.0000110018145,0.0012182844],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987029,0.00022674967,0.00027179113,0.000303647,0.0002277783,0.000267131],"domain_scores_gemma":[0.9991518,0.000032568372,0.000104643295,0.000555968,0.00005152185,0.00010346351],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008604581,0.00011627441,0.00024823198,0.000062353145,0.00017823908,0.000008297249,0.0006275637,0.00023232932,0.00032905678],"category_scores_gemma":[0.0012557404,0.00008510002,0.00011701774,0.000060916384,0.00029146098,0.0000018761928,0.00032675645,0.00014827943,0.0000071874547],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003396098,0.00013055596,0.0058732615,0.000012974634,0.000044638902,0.000012426904,0.000059489517,0.000001133103,0.9891827,0.0011369974,0.0018778126,0.0013283793],"study_design_scores_gemma":[0.0010839223,0.0003658135,0.8986215,0.0000140189995,0.000015564361,0.000014694317,0.00003505455,0.000011900175,0.04856639,0.00024633834,0.050901823,0.00012295826],"about_ca_topic_score_codex":0.00004295489,"about_ca_topic_score_gemma":0.00039131157,"teacher_disagreement_score":0.9406163,"about_ca_system_score_codex":0.000016581058,"about_ca_system_score_gemma":0.00014515419,"threshold_uncertainty_score":0.3602941},"labels":[],"label_agreement":null},{"id":"W2764214344","doi":"10.1093/mmy/myx082","title":"Deletion of Aspergillus nidulans GDP-mannose transporters affects hyphal morphometry, cell wall architecture, spore surface character, cell adhesion, and biofilm formation","year":2017,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Microbiology; Aspergillus nidulans; Biofilm; Biology; Aspergillus fumigatus; Echinocandins; Cell wall; Mannose; Antifungal drug; Cell biology; Candida albicans; Biochemistry; Bacteria; Amphotericin B; Mutant","score_opus":0.012009083041003739,"score_gpt":0.26083909284759205,"score_spread":0.24883000980658831,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2764214344","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944198,0.00039947307,0.0010407033,0.0020422323,0.00025719704,0.00046203317,0.000034961908,0.000033895354,0.0013096699],"genre_scores_gemma":[0.9976332,0.0006420031,0.00055691705,0.0004995591,0.00009743006,0.0000070047527,0.00014353106,0.000019375684,0.00040098152],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981644,0.000105525534,0.00043215515,0.00038322096,0.00052709074,0.00038760097],"domain_scores_gemma":[0.9985552,0.00018029007,0.00029207955,0.0004979645,0.00009579521,0.0003787009],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00059842743,0.00021738278,0.00060355564,0.00011887826,0.00017406327,0.00001197816,0.00022175924,0.00043539173,0.00042642525],"category_scores_gemma":[0.0003190228,0.00017109157,0.00012987942,0.00008882984,0.000522766,0.00011413112,0.000048275226,0.00043398986,0.000020603777],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0028730615,0.0014561072,0.5099826,0.003062287,0.00008222337,0.0010316671,0.0013911427,0.000005538388,0.44894853,0.00013684844,0.0029298633,0.02810013],"study_design_scores_gemma":[0.0038434379,0.0012837647,0.92340165,0.00018962291,0.00015436464,0.00010191393,0.00012706431,0.00042175964,0.06590546,0.00012216803,0.004225353,0.00022343149],"about_ca_topic_score_codex":0.00017586611,"about_ca_topic_score_gemma":0.0002644715,"teacher_disagreement_score":0.41341907,"about_ca_system_score_codex":0.00004965818,"about_ca_system_score_gemma":0.000112478345,"threshold_uncertainty_score":0.69769114},"labels":[],"label_agreement":null},{"id":"W2766298573","doi":"10.1093/mmy/myx090","title":"Overexpression of Aspergillus nidulans α-1,3-glucan synthase increases cellular adhesion and causes cell wall defects","year":2017,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Aspergillus fumigatus; Aspergillus nidulans; Biofilm; Hypha; Microbiology; Adhesion; Glucan; Cell adhesion; Pathogenesis; Phenotype; Biology; Cell biology; Strain (injury); Cell wall; Chemistry; Cell; Bacteria; Gene; Biochemistry; Immunology; Genetics; Anatomy","score_opus":0.015576931294438235,"score_gpt":0.28811494246148206,"score_spread":0.27253801116704385,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2766298573","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950789,0.0010587903,0.00004266492,0.00051825383,0.00011759274,0.00024395066,0.00001343766,0.000028475102,0.0028979306],"genre_scores_gemma":[0.99833,0.0005472953,0.00014776134,0.0004143829,0.00012300987,0.000009389089,0.000017545432,0.00001632749,0.00039426982],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99833995,0.00014596475,0.00033328313,0.00038318112,0.0004793975,0.0003182095],"domain_scores_gemma":[0.99813044,0.0004598825,0.00019050587,0.0006456537,0.00008763436,0.00048585702],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00045177896,0.00017188751,0.00056138536,0.00006509413,0.0002283269,0.000010991461,0.00020608408,0.00036825996,0.001383781],"category_scores_gemma":[0.0036668007,0.00012663491,0.000120566016,0.000035642992,0.0007352902,0.000066053864,0.00020179,0.00029347587,0.000019725465],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000786878,0.0007686141,0.57542604,0.0006298269,0.000039972354,0.0005097501,0.00010945409,1.244505e-7,0.4176273,0.00021318786,0.0019625556,0.0019263307],"study_design_scores_gemma":[0.0028279815,0.0012038352,0.82137847,0.00073289266,0.00018929358,0.00005160351,0.00013335854,0.00010195824,0.16960147,0.00026921355,0.0033156946,0.00019423373],"about_ca_topic_score_codex":0.0009283498,"about_ca_topic_score_gemma":0.00031005114,"teacher_disagreement_score":0.24802582,"about_ca_system_score_codex":0.00003764816,"about_ca_system_score_gemma":0.0002502006,"threshold_uncertainty_score":0.99952906},"labels":[],"label_agreement":null},{"id":"W2789020304","doi":"10.1093/mmy/myx006","title":"OUP accepted manuscript","year":2017,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"European Social Fund; Astellas Pharma Global Development; Astellas Pharma; European Society for Paediatric Infectious Diseases; Sick Kids Foundation; General Secretariat for Research and Technology","keywords":"Biology","score_opus":0.03768667728001352,"score_gpt":0.3640411717592894,"score_spread":0.3263544944792759,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2789020304","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8869562,0.00015253342,0.00028911067,0.01659759,0.00079286227,0.0002021107,0.0000026460182,0.00006934555,0.094937585],"genre_scores_gemma":[0.9887664,0.000086954424,0.00021281936,0.003778716,0.00039351537,0.000013651598,0.000008955588,0.000010546856,0.00672846],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986874,0.00004780905,0.0002271637,0.00028961306,0.00041157554,0.0003364701],"domain_scores_gemma":[0.9986115,0.00009290779,0.00007690705,0.00075365923,0.00007168633,0.00039334287],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00045283203,0.00010541579,0.00035532378,0.000037526897,0.00025622896,0.000018370745,0.00033181885,0.00030858448,0.017617837],"category_scores_gemma":[0.004431833,0.00007927087,0.00009806022,0.00003052622,0.00055294717,0.000058181493,0.00014336294,0.0003877166,0.0006395768],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00078690785,0.00055125554,0.7568525,0.00014803947,0.00011243004,0.0023710835,0.00014604394,2.527331e-8,0.0059293336,0.0032259854,0.11312103,0.11675538],"study_design_scores_gemma":[0.0013225608,0.00026505606,0.9308045,0.00004012239,0.00003912069,0.000075436204,0.000052199513,0.000057773785,0.00047717826,0.0005107099,0.066273175,0.000082196435],"about_ca_topic_score_codex":0.000055504825,"about_ca_topic_score_gemma":0.00014696499,"teacher_disagreement_score":0.17395198,"about_ca_system_score_codex":0.000043378222,"about_ca_system_score_gemma":0.00020970726,"threshold_uncertainty_score":0.9832802},"labels":[],"label_agreement":null},{"id":"W2791128600","doi":"10.1093/mmy/myx157","title":"The effect of melatonin on antifungal susceptibility in planktonic and biofilm forms of<i>Candida</i>strains isolated from clinical samples","year":2017,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Biofilm; Fluconazole; Microbiology; Melatonin; Broth microdilution; Antifungal; Biology; Minimum inhibitory concentration; Antibiotics; Bacteria","score_opus":0.021938901195255614,"score_gpt":0.351278666696469,"score_spread":0.3293397655012134,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791128600","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965423,0.0004354161,0.000022780448,0.0011364444,0.00028052556,0.0004959974,0.00006638945,0.00001506492,0.0010050796],"genre_scores_gemma":[0.99910504,0.00056779856,0.000039328777,0.000119924654,0.00008212974,0.0000099632725,0.000024181049,0.000011392066,0.00004023625],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99738336,0.00037298782,0.0009393636,0.0004717512,0.00044702008,0.00038551405],"domain_scores_gemma":[0.99413806,0.0043192953,0.0003428893,0.00089245214,0.000055552286,0.00025176705],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0035866874,0.00019274186,0.0010576074,0.000056168145,0.00015367896,0.000011536939,0.00035689404,0.00055738527,0.00025002682],"category_scores_gemma":[0.010969197,0.00010735253,0.00018929067,0.0000736538,0.0026235674,0.000044893084,0.00014770556,0.0007945072,0.000007631394],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0043657557,0.0001999522,0.97255135,0.000092234644,0.0000990931,0.000067393,0.00005794738,8.574439e-8,0.0034789613,0.00050982455,0.00018589977,0.018391479],"study_design_scores_gemma":[0.0041550216,0.004490089,0.9866423,0.0002189234,0.00007708969,0.000008953689,0.000055148794,0.00021138553,0.0032919364,0.0005049174,0.0002558115,0.0000884021],"about_ca_topic_score_codex":0.00056794187,"about_ca_topic_score_gemma":0.003619041,"teacher_disagreement_score":0.018303078,"about_ca_system_score_codex":0.000039882547,"about_ca_system_score_gemma":0.00026441558,"threshold_uncertainty_score":0.99736184},"labels":[],"label_agreement":null},{"id":"W2884790029","doi":"10.1111/j.1365-280x.1999.00192.x","title":"Comment on the correspondence between Dr J. Guarro and Dr C. Rajendran in Medical Mycology 1998; 36: 349-50","year":2008,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Health and Long Term Care; University of Alberta","funders":"","keywords":"Herbarium; Devonian; Library science; Christian ministry; Archaeology; Geography; Political science; Law; Geology; Biology; Ecology; Paleontology; Computer science","score_opus":0.018769549295127627,"score_gpt":0.26752699374741656,"score_spread":0.24875744445228892,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2884790029","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97008836,0.00090662413,0.00015186743,0.027124148,0.00033025822,0.00027651273,0.00015125827,0.00001696072,0.0009539816],"genre_scores_gemma":[0.9737328,0.0015575787,0.00002815633,0.023761379,0.00041582293,0.0000748162,0.0002007851,0.000016829776,0.00021180967],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9974988,0.00057978736,0.00039250826,0.00050251,0.0005060149,0.0005203983],"domain_scores_gemma":[0.99824846,0.00086140435,0.00007685442,0.00032530242,0.000024336938,0.00046365304],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007759277,0.00022535946,0.00038177473,0.0000838305,0.00018483054,0.000006939551,0.00049707113,0.00065390783,0.00073079235],"category_scores_gemma":[0.0018224659,0.00015813073,0.00008093,0.00012264602,0.0008690891,0.000002866691,0.00031787134,0.00048960716,0.00007134433],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0032567112,0.0017491303,0.33385843,0.00009575477,0.00036007073,0.0065981247,0.0005163522,0.000007819506,0.086866684,0.0039016132,0.5496905,0.013098862],"study_design_scores_gemma":[0.002446917,0.0017566537,0.31170514,0.00007770859,0.000044969347,0.0008151898,0.000092450784,0.00020821857,0.0017340934,0.00031723248,0.6803977,0.0004037113],"about_ca_topic_score_codex":0.00005351673,"about_ca_topic_score_gemma":0.00013997518,"teacher_disagreement_score":0.13070725,"about_ca_system_score_codex":0.000023440225,"about_ca_system_score_gemma":0.0003214592,"threshold_uncertainty_score":0.80016637},"labels":[],"label_agreement":null},{"id":"W2901481860","doi":"10.1111/j.1365-280x.1999.00183.x","title":"Exophiala (Wangiella) dermatitidis keratitis after keratoplasty","year":2008,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Ocular Infections and Treatments","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotel Dieu Hospital","funders":"","keywords":"Keratitis; Microbiology; Medicine; Dermatology; Biology","score_opus":0.008583304273574557,"score_gpt":0.2470628753490031,"score_spread":0.23847957107542853,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2901481860","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98093504,0.00037015518,0.00039971338,0.003234742,0.0005641963,0.00022671085,0.0000075658186,0.000088256915,0.014173608],"genre_scores_gemma":[0.99361855,0.0003618548,0.0006066892,0.003247596,0.00032488597,0.00011514457,0.000030606217,0.000016499022,0.0016781918],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99889207,0.000066100314,0.00022669231,0.00021918693,0.0003171861,0.0002787494],"domain_scores_gemma":[0.99928224,0.00008505378,0.000028363796,0.00021134717,0.000057593963,0.00033542275],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00007316584,0.00013174144,0.00029367636,0.00009273354,0.00012874653,0.0000049658474,0.00004470907,0.00024541546,0.013778106],"category_scores_gemma":[0.00022432223,0.00010245494,0.00010881031,0.00015157335,0.00022562925,0.000038148497,0.00004296192,0.00022742378,0.0010744528],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001324662,0.0011529708,0.9302422,0.000057400703,0.00031780818,0.021774005,0.0002530488,7.8868203e-7,0.00017351883,0.0005919304,0.036882855,0.008421006],"study_design_scores_gemma":[0.0044160704,0.000856262,0.7766705,0.000067615576,0.00014310304,0.015126719,0.00001553185,0.0001185693,0.0011934288,0.00018798739,0.20099269,0.00021151073],"about_ca_topic_score_codex":0.00005013547,"about_ca_topic_score_gemma":0.00006701729,"teacher_disagreement_score":0.16410984,"about_ca_system_score_codex":0.000058384034,"about_ca_system_score_gemma":0.00022476324,"threshold_uncertainty_score":0.99970335},"labels":[],"label_agreement":null},{"id":"W2904374704","doi":"10.1093/mmy/myy133","title":"Yeast-like filamentous fungi: Molecular identification and in vitro susceptibility study","year":2018,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Hospital Foundation","funders":"Shandong Academy of Sciences; Astellas Pharma; Pfizer","keywords":"Posaconazole; Biology; Microbiology; Voriconazole; Itraconazole; Echinocandin; Echinocandins; Flucytosine; Geotrichum; Minimum inhibitory concentration; Yeast; Fungemia; Amphotericin B; Antifungal; Fluconazole; Caspofungin; Antimicrobial; Genetics","score_opus":0.013102844367873146,"score_gpt":0.31063171925389577,"score_spread":0.29752887488602264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2904374704","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970894,0.000250038,0.0003744139,0.0006685009,0.00027243554,0.00071525597,0.000004283036,0.000040872448,0.00058482797],"genre_scores_gemma":[0.99833053,0.000029652238,0.00011273467,0.0009295423,0.00012457048,0.000038516835,0.000016604514,0.000011708316,0.00040614943],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9979187,0.0002558231,0.00045377537,0.0005489767,0.00048919494,0.00033351098],"domain_scores_gemma":[0.99899787,0.000119299766,0.000060381917,0.00044148794,0.000112906724,0.00026803964],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0012731104,0.0001357054,0.0003882509,0.000107725704,0.000058216527,0.0000107895585,0.00011962656,0.0002129934,0.0010835958],"category_scores_gemma":[0.0011788438,0.00011622064,0.000047407473,0.00024303082,0.00055285014,0.000042256856,0.00009893254,0.0003116109,0.00011164031],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022669083,0.0019530937,0.4685075,0.00008414785,0.000053911404,0.000545956,0.000729431,6.76888e-8,0.5068185,0.00005746788,0.00072642457,0.018256618],"study_design_scores_gemma":[0.0018588237,0.0008917219,0.9875333,0.000021203778,0.00005195209,0.000031202402,0.00061920116,0.00019117285,0.0077770734,0.00024032808,0.0006785749,0.00010545389],"about_ca_topic_score_codex":0.000119816774,"about_ca_topic_score_gemma":0.001049682,"teacher_disagreement_score":0.5190258,"about_ca_system_score_codex":0.00010448105,"about_ca_system_score_gemma":0.00017135026,"threshold_uncertainty_score":0.99982953},"labels":[],"label_agreement":null},{"id":"W2920024053","doi":"10.1093/mmy/myy087","title":"<i>Aspergillus-Pseudomonas</i> interaction, relevant to competition in airways","year":2018,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Armand Frappier Museum; Institut National de la Recherche Scientifique","funders":"Cambridge Institute for Medical Research, University of Cambridge; Austrian Science Fund","keywords":"Pyoverdine; Aspergillus fumigatus; Pseudomonas aeruginosa; Microbiology; Biofilm; Siderophore; Quorum sensing; Biology; Virulence; Pyocyanin; Bacteria; Gene; Biochemistry","score_opus":0.019043453694197205,"score_gpt":0.3067276073681892,"score_spread":0.287684153673992,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2920024053","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0026896154,0.9870442,0.00012527755,0.00072031765,0.0034326836,0.0007659648,0.0000622162,0.00003605604,0.0051236567],"genre_scores_gemma":[0.0005869695,0.9955395,0.00031782914,0.0009825587,0.0016486342,0.00005863665,0.0005244594,0.00005223522,0.00028920462],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9975688,0.0005079895,0.0006717922,0.0006537209,0.00018744743,0.00041025938],"domain_scores_gemma":[0.9990229,0.00012545373,0.00016583061,0.00036083584,0.00006368281,0.0002612944],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005923055,0.00033351962,0.00094279094,0.00016748409,0.0000517603,0.000020004867,0.00031196608,0.0012897166,0.0004468223],"category_scores_gemma":[0.0007918034,0.0002795062,0.0002246288,0.00020049803,0.00019109556,0.0000025668244,0.00033080333,0.00045201246,0.0003513246],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013651131,0.00025888399,0.000007309574,0.0017058748,0.00012516369,0.000232184,0.000040154424,3.950762e-7,0.008694061,0.0006275626,0.031063037,0.95710886],"study_design_scores_gemma":[0.0002436767,0.000413858,0.000006964347,0.0022055104,0.00005222341,0.0004468674,0.000006635058,0.0000014299515,0.00021839161,0.000008682714,0.99610716,0.00028858482],"about_ca_topic_score_codex":0.00003703012,"about_ca_topic_score_gemma":0.0002824322,"teacher_disagreement_score":0.96504414,"about_ca_system_score_codex":0.00006651645,"about_ca_system_score_gemma":0.00036135013,"threshold_uncertainty_score":0.9999657},"labels":[],"label_agreement":null},{"id":"W2920766005","doi":"10.1093/mmy/myy067","title":"Beyond tissue concentrations: antifungal penetration at the site of infection","year":2018,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Antifungal; Antifungal drug; Antifungal drugs; Drug; Penetration (warfare); Echinocandins; Medicine; Biology; Pharmacology; Intensive care medicine; Microbiology; Voriconazole","score_opus":0.034926496876316666,"score_gpt":0.3805637356394818,"score_spread":0.34563723876316516,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2920766005","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.004437068,0.9886241,0.00017910842,0.00028195095,0.00077769667,0.0011982212,0.000056349207,0.000032977772,0.004412555],"genre_scores_gemma":[0.0039050356,0.9921205,0.00002883812,0.0003064549,0.0007714955,0.00006800443,0.00066691433,0.000022068063,0.002110672],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99740064,0.00046693892,0.00086160813,0.00041037097,0.00057904574,0.00028140223],"domain_scores_gemma":[0.9980008,0.00074649183,0.00037726288,0.00049830007,0.00020040534,0.00017674407],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0009848058,0.00024441947,0.0012998835,0.000085535474,0.0001470852,0.000007465873,0.000104323655,0.00085128896,0.0076008234],"category_scores_gemma":[0.0016412543,0.00014474636,0.0003045978,0.00032206904,0.00096765603,0.000037570462,0.00009306023,0.00055252947,0.00042611762],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025337187,0.0005946239,0.014246672,0.02292609,0.000541529,0.00014026811,0.00022585335,1.1472292e-7,0.00016962562,0.0015959548,0.11381992,0.845486],"study_design_scores_gemma":[0.0003312054,0.0005507642,0.005164022,0.002050467,0.00083962345,0.00017821512,0.000004351082,0.0000072379803,0.000041729672,0.000055920525,0.9906594,0.00011707239],"about_ca_topic_score_codex":0.0001193432,"about_ca_topic_score_gemma":0.0016710812,"teacher_disagreement_score":0.87683946,"about_ca_system_score_codex":0.00019413696,"about_ca_system_score_gemma":0.0010143481,"threshold_uncertainty_score":0.99330634},"labels":[],"label_agreement":null},{"id":"W2946565232","doi":"10.1093/mmy/myz048","title":"Mortality associated with Blastomyces dermatitidis infection: A systematic review of the literature and meta-analysis","year":2019,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Blastomyces dermatitidis; Blastomyces; Meta-analysis; Blastomycosis; Medicine; Systematic review; MEDLINE; Biology; Microbiology; Immunology; Pathology","score_opus":0.0800915953628408,"score_gpt":0.3781069985437963,"score_spread":0.29801540318095554,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2946565232","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00002758851,0.996635,0.000006581778,0.0005533846,0.0000962068,0.0020998893,0.0000770287,0.00002086676,0.0004834384],"genre_scores_gemma":[0.00032940545,0.9973894,0.000005229852,0.0010292885,0.000027656446,0.0005158817,0.00006934838,0.000014472476,0.0006193706],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9966648,0.0012302877,0.0010450007,0.0003092084,0.00057508773,0.00017561375],"domain_scores_gemma":[0.997044,0.0011310426,0.0008669096,0.0005575352,0.00029401286,0.00010647328],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011308664,0.00033872327,0.009310315,0.00019010354,0.00008153875,0.000010749503,0.00011929464,0.0004569346,0.0006936123],"category_scores_gemma":[0.0035953613,0.00013142872,0.002110837,0.0017834066,0.00027616875,0.000024889037,0.00011447287,0.0006889512,0.000007805662],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[7.053077e-7,0.000070216076,0.00019760428,0.7912073,0.2078726,0.00001845495,0.000029781782,3.377873e-8,2.7431986e-9,0.000041382846,0.00047019348,0.00009174321],"study_design_scores_gemma":[0.00009085742,0.0001191331,0.00032390715,0.2305636,0.75226027,0.00026882035,0.000002293021,0.0000017528772,2.8604033e-8,0.0000038536164,0.01627087,0.00009461571],"about_ca_topic_score_codex":0.000037245478,"about_ca_topic_score_gemma":0.00017899112,"teacher_disagreement_score":0.5606437,"about_ca_system_score_codex":0.00006395367,"about_ca_system_score_gemma":0.00028525564,"threshold_uncertainty_score":0.7594569},"labels":[],"label_agreement":null},{"id":"W3014970021","doi":"10.1093/mmy/myaa016","title":"Novel Penicillium species causing disseminated disease in a Labrador Retriever dog","year":2020,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Mycotoxins in Agriculture and Food","field":"Agricultural and Biological Sciences","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Biology; Penicillium; Amphotericin B; Microbiology; Paecilomyces; Microsporum canis; Pathology; Botany; Medicine","score_opus":0.022696704053026852,"score_gpt":0.2321386256324735,"score_spread":0.20944192157944666,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3014970021","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9627944,0.00023472327,0.00002121242,0.034989636,0.0002225124,0.00022721954,0.000052169165,0.00008200359,0.0013760724],"genre_scores_gemma":[0.99381936,0.00007086615,0.00004493463,0.004946339,0.00068511063,0.000018078266,0.000096089134,0.0000012508052,0.000317963],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983949,0.000086588334,0.00031013528,0.00040603505,0.00039637214,0.00040596508],"domain_scores_gemma":[0.9989189,0.00036716452,0.00006271462,0.00004875089,0.000039692826,0.000562803],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00019814525,0.00016684228,0.0002971876,0.000012012926,0.000087078246,0.00002428761,0.00030495398,0.00024576386,0.0059627066],"category_scores_gemma":[0.0013362187,0.00005943319,0.00008207743,0.0007274374,0.00013550534,0.00006570368,0.00017937027,0.0003787178,0.00007828431],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005130282,0.0010922856,0.06774168,0.00006935103,0.000055239718,0.0018349638,0.0011177872,0.0000068993863,0.8702097,0.003354773,0.03373782,0.020266486],"study_design_scores_gemma":[0.00059830054,0.0004192939,0.86797976,0.000057659137,0.000026283045,0.000030576888,0.00029376458,0.00038867598,0.0014814583,0.0001636226,0.12820128,0.00035935667],"about_ca_topic_score_codex":0.0001504052,"about_ca_topic_score_gemma":0.0006981745,"teacher_disagreement_score":0.8687282,"about_ca_system_score_codex":0.000032794902,"about_ca_system_score_gemma":0.000026575884,"threshold_uncertainty_score":0.994946},"labels":[],"label_agreement":null},{"id":"W3087503803","doi":"10.1093/mmy/myaa075","title":"On the lineage of <i>Aspergillus fumigatus</i> isolates in common laboratory use","year":2020,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":92,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Biotechnology and Biological Sciences Research Council; Medical Research Council; Medical Research Council Canada; Wellcome Trust","keywords":"Aspergillus fumigatus; Biology; Documentation; Nomenclature; Microbiology; Genetics; Library science; Computer science; Zoology; Taxonomy (biology); Programming language","score_opus":0.025740067195864608,"score_gpt":0.279775039189854,"score_spread":0.2540349719939894,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3087503803","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9758462,0.00021117892,0.000032856446,0.022711327,0.00009021414,0.0002178983,0.00001474349,0.000024342113,0.0008512706],"genre_scores_gemma":[0.97248864,0.0001155436,0.000038402024,0.02718454,0.000090259324,0.00000797332,0.000008006134,0.00000980511,0.000056802764],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99869657,0.00022153408,0.00036605712,0.00021609408,0.000285523,0.0002142165],"domain_scores_gemma":[0.99798685,0.0014245899,0.000058596772,0.0002463138,0.00006256058,0.00022110745],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00046231932,0.00010292632,0.00042866604,0.00003167479,0.000027653577,0.0000029885564,0.00015044484,0.00022570949,0.0014607966],"category_scores_gemma":[0.004551183,0.00006255008,0.00006404425,0.0003090817,0.00038481047,0.00002603837,0.000059723618,0.0006195765,0.00006109141],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0043422715,0.0013342787,0.871248,0.0004027406,0.00011715784,0.0012022657,0.0018114105,0.000008016488,0.04273003,0.018844213,0.055507917,0.0024516745],"study_design_scores_gemma":[0.0056846444,0.005134254,0.8840159,0.00051673956,0.00011437005,0.00001986062,0.00090842514,0.0030602722,0.023637526,0.0008051246,0.0757253,0.00037753838],"about_ca_topic_score_codex":0.00004662417,"about_ca_topic_score_gemma":0.00020073062,"teacher_disagreement_score":0.020217385,"about_ca_system_score_codex":0.00002838144,"about_ca_system_score_gemma":0.0002040979,"threshold_uncertainty_score":0.999452},"labels":[],"label_agreement":null},{"id":"W3110340660","doi":"10.1093/mmy/myaa096","title":"Genotypic diversity and antifungal susceptibility of environmental isolates of <i>Cryptococcus neoformans</i> from the Yangtze River Delta region of East China","year":2020,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"National Natural Science Foundation of China","keywords":"Cryptococcus neoformans; Cryptococcosis; Biology; Cryptococcus; Fluconazole; Genetic diversity; Genotype; Microbiology; Population; Antifungal; Gene; Genetics; Medicine; Environmental health","score_opus":0.017277585859770066,"score_gpt":0.2205503015760861,"score_spread":0.20327271571631603,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3110340660","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99685323,0.0005505952,0.00020778347,0.0018410651,0.00008019832,0.000227019,0.00007176482,0.000007904936,0.00016040703],"genre_scores_gemma":[0.9990995,0.0003728319,0.000066752385,0.00036934923,0.00006768767,0.000002080373,0.000011176548,0.0000039012516,0.000006702216],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991936,0.00008000139,0.00026317153,0.00016387986,0.00017695838,0.00012238085],"domain_scores_gemma":[0.9994248,0.00020096467,0.00011053226,0.00013825625,0.000022226744,0.000103197206],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014381047,0.00008780971,0.00037674696,0.000018668756,0.00013207676,6.0092816e-7,0.00009380643,0.00012051675,0.0005382003],"category_scores_gemma":[0.00023853626,0.000057118756,0.000076432596,0.000077722325,0.0010943371,0.00002567047,0.0005209729,0.00020211792,0.0000024424214],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004255549,0.00022131433,0.97824347,0.00007877835,0.00014058397,0.000012787436,0.0044931,7.6342627e-7,0.013489217,0.00006562515,0.00089985365,0.0019289337],"study_design_scores_gemma":[0.0010565392,0.0009432755,0.99547714,0.000027455726,0.00013890007,0.000013761509,0.00045986567,0.00019964056,0.0011139386,0.00010084173,0.00042423382,0.00004441056],"about_ca_topic_score_codex":0.0006698384,"about_ca_topic_score_gemma":0.00007282176,"teacher_disagreement_score":0.017233647,"about_ca_system_score_codex":0.000014880713,"about_ca_system_score_gemma":0.000025721092,"threshold_uncertainty_score":0.58929163},"labels":[],"label_agreement":null},{"id":"W3115852371","doi":"10.1093/mmy/myaa100","title":"Cross-reactivity of a <i>Histoplasma capsulatum</i> antigen enzyme immunoassay in urine specimens from persons with emergomycosis in South Africa","year":2020,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Histoplasmosis; Histoplasma; Immunoassay; Histopathology; Antigen; Dimorphic fungus; Urine; Biology; Cryptococcosis; Mycosis; Microbiology; Pathology; Medicine; Immunology; Antibody; Internal medicine; Histoplasma capsulatum","score_opus":0.020749217362483252,"score_gpt":0.261718104516076,"score_spread":0.24096888715359277,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3115852371","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9903702,0.00077375444,0.00006601916,0.0037248416,0.00014086535,0.0002525008,0.00005615404,0.000032532265,0.004583143],"genre_scores_gemma":[0.9988347,0.00009022358,0.00025040904,0.00047380856,0.00013027314,0.000037840822,0.000016230631,0.000017287464,0.00014920297],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984098,0.00011559152,0.00041591385,0.0003743033,0.00032881118,0.0003555656],"domain_scores_gemma":[0.99910784,0.00032990088,0.000100415135,0.00019305013,0.000056830188,0.0002119921],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00024880527,0.00018143731,0.0007534515,0.00014740693,0.000049790764,0.0000041250114,0.00010435368,0.00021989044,0.0014751755],"category_scores_gemma":[0.00081017613,0.00014088032,0.000083622945,0.0005521719,0.00037870766,0.000040369916,0.00010668614,0.0006364907,0.000026719797],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011934792,0.00094672653,0.95376986,0.000072034745,0.00018972628,0.0010979349,0.014206655,0.000017733464,0.026855905,0.00007378055,0.0012008146,0.00037536977],"study_design_scores_gemma":[0.0053697983,0.0014799903,0.97171247,0.00013462883,0.000074499636,0.00004671992,0.0009804869,0.00055750355,0.002714967,0.000022607055,0.016698154,0.00020818031],"about_ca_topic_score_codex":0.0015522698,"about_ca_topic_score_gemma":0.0013060567,"teacher_disagreement_score":0.02414094,"about_ca_system_score_codex":0.00010286386,"about_ca_system_score_gemma":0.000210888,"threshold_uncertainty_score":0.99943763},"labels":[],"label_agreement":null},{"id":"W3120978965","doi":"10.1093/mmy/myaa110","title":"CYP51A polymorphisms of<i>Aspergillus fumigatus</i>in lung transplant recipients: Prevalence, correlation with phenotype, and impact on outcomes","year":2021,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Public Health Ontario; University Health Network","funders":"","keywords":"Aspergillus fumigatus; Genotyping; Broth microdilution; Genotype; Aspergillus; Aspergillosis; Biology; Lung; Microbiology; Medicine; Immunology; Internal medicine; Antibiotics; Minimum inhibitory concentration; Gene; Genetics","score_opus":0.007554788825837017,"score_gpt":0.2801611669687001,"score_spread":0.27260637814286304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3120978965","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955033,0.00087004324,0.0003904034,0.0013480268,0.00016819246,0.0002310488,0.00002365242,0.000017334243,0.0014480017],"genre_scores_gemma":[0.9980719,0.0005007708,0.00014612699,0.00064538396,0.000034737943,0.000009481375,0.000037363974,0.000011645445,0.00054259517],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99842846,0.00013751345,0.00035095864,0.00033948716,0.00046785802,0.00027572096],"domain_scores_gemma":[0.9989539,0.00043655746,0.00006772737,0.00023370524,0.00007937814,0.00022873601],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003441495,0.00015346016,0.00053752225,0.000092500195,0.000032207827,0.0000030761,0.000061749226,0.00023577295,0.0013266272],"category_scores_gemma":[0.00050000893,0.00009720758,0.00007482334,0.0002505945,0.00027464985,0.000040528488,0.000018897414,0.00036254,0.000007939527],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016476732,0.0003728561,0.9936101,0.00014909504,0.00007105293,0.0005371188,0.00028662404,0.0000083961295,0.00059079815,0.00073222147,0.00009575494,0.001898343],"study_design_scores_gemma":[0.0023652993,0.0008315801,0.9952306,0.00046950398,0.00010513405,0.00009189115,0.00006086904,0.00038334,0.00022711056,0.00007626764,0.00006500309,0.000093408824],"about_ca_topic_score_codex":0.00007267186,"about_ca_topic_score_gemma":0.00022161781,"teacher_disagreement_score":0.0025685974,"about_ca_system_score_codex":0.000091137634,"about_ca_system_score_gemma":0.00039821854,"threshold_uncertainty_score":0.9995863},"labels":[],"label_agreement":null},{"id":"W3125108974","doi":"10.1093/mmy/myaa120","title":"A novel TaqMan qPCR assay for rapid detection and quantification of pro-inflammatory microalgae <i>Prototheca</i> spp. in milk samples","year":2021,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Milk Quality and Mastitis in Dairy Cows","field":"Agricultural and Biological Sciences","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Národní Agentura pro Zemědělský Výzkum; Natural Environment Research Council; Sight Research UK; Ministry of Agriculture - Saskatchewan","keywords":"Biology; TaqMan; Microbiology; Mastitis; Multiplex; Genotype; Real-time polymerase chain reaction; Gene; Genetics","score_opus":0.03960362158448398,"score_gpt":0.2622983675124921,"score_spread":0.2226947459280081,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3125108974","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99101233,0.00050682033,0.0041775103,0.003053497,0.0002710517,0.000704494,0.00006141297,0.000028076995,0.00018477667],"genre_scores_gemma":[0.9976931,0.00021078433,0.0010290178,0.00048856373,0.00017509802,0.00024069156,0.00006984765,0.0000013693044,0.00009152264],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987472,0.00021275612,0.0003696014,0.00030045872,0.00016341357,0.0002065611],"domain_scores_gemma":[0.998783,0.00088281085,0.00010822913,0.000059122314,0.00008157111,0.00008528635],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011261937,0.00009187809,0.00023495479,0.000018369685,0.000076749144,0.000010137241,0.0001317935,0.00025729256,0.00054856576],"category_scores_gemma":[0.0014747711,0.00004545987,0.000053299616,0.00017531244,0.00018611166,0.00004185161,0.000064247026,0.00013544991,0.0000037229936],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008071088,0.00016200637,0.0019651786,0.00007726654,0.000008123299,0.0000041864687,0.00007586584,3.843172e-7,0.86169416,0.0017403573,0.00020145878,0.1339903],"study_design_scores_gemma":[0.0022148502,0.0009837323,0.31352755,0.0001867431,0.000034797384,0.00016269277,0.00084796996,0.00081131276,0.427703,0.005394655,0.24769835,0.000434344],"about_ca_topic_score_codex":0.00018119861,"about_ca_topic_score_gemma":0.0071659237,"teacher_disagreement_score":0.43399116,"about_ca_system_score_codex":0.000016777392,"about_ca_system_score_gemma":0.00004246614,"threshold_uncertainty_score":0.600641},"labels":[],"label_agreement":null},{"id":"W3174090680","doi":"10.1093/mmy/myab036","title":"Raw bovine milk as a reservoir of yeast with virulence factors and decreased susceptibility to antifungal agents","year":2021,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Milk Quality and Mastitis in Dairy Cows","field":"Agricultural and Biological Sciences","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Ministry of Agriculture - Saskatchewan","keywords":"Yeast; Biology; Fluconazole; Microbiology; Kluyveromyces marxianus; Flucytosine; Kluyveromyces lactis; Virulence; Raw milk; Food science; Antifungal; Saccharomyces cerevisiae; Biochemistry","score_opus":0.026639854116631115,"score_gpt":0.27236189628438695,"score_spread":0.24572204216775584,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3174090680","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99615616,0.00006939357,0.000020233138,0.0027067545,0.000112774236,0.00014336416,0.000052376497,0.000022612376,0.0007163494],"genre_scores_gemma":[0.99825746,0.000054945795,0.00013479099,0.0012128284,0.000074553776,0.000007836427,0.000050650466,8.4379434e-7,0.00020611283],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99839973,0.00031099375,0.000248405,0.0003833998,0.00038974307,0.00026770213],"domain_scores_gemma":[0.9988193,0.0005067756,0.000055074033,0.00009974084,0.000106959655,0.0004121287],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00042944858,0.00012003627,0.00029726385,0.000011054231,0.000091023074,0.000011619447,0.00023839962,0.00016750657,0.009696485],"category_scores_gemma":[0.0024185912,0.00004594782,0.000043062588,0.00029789328,0.00030393782,0.000041559204,0.00023680828,0.00016076418,0.000020224456],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009811016,0.0010799676,0.7084542,0.00013364918,0.0000801654,0.0005718539,0.00063735445,0.000002515239,0.260037,0.0017602901,0.005778041,0.020483838],"study_design_scores_gemma":[0.00038695644,0.0013508662,0.9715596,0.00007128277,0.000015594927,0.000052735504,0.0004971816,0.00001924148,0.009723839,0.0004281864,0.015743487,0.0001510338],"about_ca_topic_score_codex":0.0011553706,"about_ca_topic_score_gemma":0.012088055,"teacher_disagreement_score":0.2631054,"about_ca_system_score_codex":0.000014265942,"about_ca_system_score_gemma":0.00007747726,"threshold_uncertainty_score":0.9912088},"labels":[],"label_agreement":null},{"id":"W3188911186","doi":"10.1093/mmy/myab042","title":"Complexing amphotericin B with gold nanoparticles improves fungal clearance from the brains of mice infected with Cryptococcal neoformans","year":2021,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Cytodiagnostics (Canada)","funders":"Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; EMC; U.S. Department of Veterans Affairs","keywords":"Amphotericin B; Cryptococcus neoformans; Microbiology; Colloidal gold; Cryptococcal meningitis; Antifungal; Cryptococcosis; Mycosis; Medicine; Chemistry; Virology; Immunology; Biology; Nanoparticle; Nanotechnology; Materials science; Human immunodeficiency virus (HIV)","score_opus":0.01255045407031422,"score_gpt":0.2518261029078343,"score_spread":0.2392756488375201,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3188911186","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9920738,0.0003897295,0.00040436152,0.005481086,0.00012196849,0.00024741763,0.000012978671,0.00004981932,0.001218889],"genre_scores_gemma":[0.9960916,0.000073964846,0.00083765853,0.002655276,0.00018203209,0.000039308423,0.000015411764,0.00001535801,0.000089404086],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99875563,0.00012008694,0.0002805171,0.00023763638,0.0002941042,0.0003120078],"domain_scores_gemma":[0.9986882,0.0006831166,0.00008443935,0.00022584817,0.000184205,0.00013416549],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015945295,0.00014488382,0.00043585978,0.000029637844,0.00012730184,0.000010079509,0.0000894764,0.00011009147,0.00034299842],"category_scores_gemma":[0.00040365363,0.000077322235,0.00005136827,0.00035823358,0.0006637549,0.00004111435,0.000089538786,0.00037001158,0.000011686896],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002752583,0.0012153898,0.3538847,0.000192292,0.0010424075,0.000908105,0.0028605228,0.000028762604,0.6203615,0.0022532411,0.0054625603,0.009037901],"study_design_scores_gemma":[0.003504103,0.0024703261,0.9618182,0.00029918758,0.00020361495,0.00057184946,0.0010079814,0.0007492112,0.019927725,0.00007871754,0.009209534,0.00015954384],"about_ca_topic_score_codex":0.0005337591,"about_ca_topic_score_gemma":0.0019582193,"teacher_disagreement_score":0.6079335,"about_ca_system_score_codex":0.00003056881,"about_ca_system_score_gemma":0.00025609753,"threshold_uncertainty_score":0.3755592},"labels":[],"label_agreement":null},{"id":"W3211206392","doi":"10.1093/mmy/myab069","title":"Factors determining the mortality in cirrhosis patients with invasive candidiasis: A systematic review and meta-analysis","year":2021,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Liver Disease and Transplantation","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Meta-analysis; Invasive candidiasis; Cirrhosis; Medicine; Internal medicine; Intensive care medicine; Dermatology; Antifungal; Fluconazole","score_opus":0.11486010021766142,"score_gpt":0.3675650583548809,"score_spread":0.2527049581372195,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3211206392","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0026716155,0.9942025,0.0000039528213,0.00010890813,0.000024279138,0.0028429467,0.0001110918,0.000010139213,0.00002459819],"genre_scores_gemma":[0.008043596,0.98866224,0.0000039652937,0.0012687242,0.00001101362,0.0010107807,0.0009701361,0.000018860255,0.000010679151],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.996466,0.00130512,0.00095554447,0.00045291608,0.0005890386,0.00023140297],"domain_scores_gemma":[0.9971461,0.0016358789,0.0004273573,0.00041836087,0.0001188365,0.00025344506],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00058258837,0.00036335128,0.007620759,0.00021197132,0.000047244645,0.00001496822,0.00016040127,0.0002759542,0.0007676464],"category_scores_gemma":[0.0006749665,0.00015363262,0.0010018962,0.00079205504,0.000119405166,0.000041843126,0.000045404217,0.00041738208,0.000004284958],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000023745654,0.00011924838,0.022546405,0.76506984,0.21152669,0.00018511518,0.0001485149,1.4983344e-8,2.4402802e-10,0.000004942996,0.000010018882,0.00038685423],"study_design_scores_gemma":[0.0003093105,0.00007570247,0.018358527,0.044055533,0.9368183,0.000010905774,0.000033409127,3.0128703e-7,1.8856591e-8,8.4402757e-7,0.00019847468,0.0001386508],"about_ca_topic_score_codex":0.00012988399,"about_ca_topic_score_gemma":0.0008108319,"teacher_disagreement_score":0.7252916,"about_ca_system_score_codex":0.00007259643,"about_ca_system_score_gemma":0.0005790736,"threshold_uncertainty_score":0.84051895},"labels":[],"label_agreement":null},{"id":"W4200417643","doi":"10.1093/mmy/myab079","title":"Four genomic clades of <i>Candida auris</i> identified in Canada, 2012–2019","year":2021,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Ontario; BC Centre for Disease Control; University of Toronto; Ste. Anne's Hospital; Alberta Hospital Edmonton; University of Alberta; University of Manitoba; Public Health Agency of Canada","funders":"Public Health Agency of Canada","keywords":"Candida auris; Clade; Biology; Outbreak; Phylogenetic tree; Microbiology; Virology; Genetics; Gene; Antifungal","score_opus":0.011385216888499559,"score_gpt":0.25405274762664243,"score_spread":0.24266753073814287,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200417643","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9909741,0.0015518705,0.00005733205,0.0040852074,0.00046365985,0.00013881584,0.000015650257,0.000008208063,0.002705109],"genre_scores_gemma":[0.9942167,0.00031308035,0.00009214676,0.0023178451,0.00010666142,0.0000075991543,0.000026234104,0.000010069452,0.0029096676],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99830097,0.00010837823,0.0004887673,0.00029603546,0.000458937,0.00034690648],"domain_scores_gemma":[0.99892855,0.0003375633,0.00007283984,0.0003044807,0.00009876666,0.00025777982],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003929533,0.000105358136,0.0005434784,0.000056109697,0.000023313834,0.0000024081469,0.00012681595,0.00019555872,0.0050376696],"category_scores_gemma":[0.0010966061,0.00009272315,0.00007220064,0.00020658429,0.00015901493,0.00002662659,0.000077328354,0.00038072377,0.000033529708],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036264412,0.00022653185,0.88050604,0.00023800778,0.00007125742,0.0034978322,0.000092987866,0.0000015049194,0.041293006,0.00041211201,0.06916864,0.0041294163],"study_design_scores_gemma":[0.0014589264,0.00007922095,0.9830167,0.00008564007,0.0000370142,0.00010524506,0.0002353558,0.000039353436,0.0031603377,0.00025561283,0.011439012,0.00008754548],"about_ca_topic_score_codex":0.2851396,"about_ca_topic_score_gemma":0.9391232,"teacher_disagreement_score":0.65398365,"about_ca_system_score_codex":0.00032850238,"about_ca_system_score_gemma":0.006445011,"threshold_uncertainty_score":0.9991875},"labels":[],"label_agreement":null},{"id":"W4205741575","doi":"10.1093/mmy/myac004","title":"Assessment of panfungal PCR performance with formalin-fixed paraffin-embedded tissue specimens","year":2022,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"","keywords":"Blastomyces; Cryptococcus neoformans; Biology; Amplicon; Polymerase chain reaction; Histopathology; Microbiology; Sanger sequencing; Blastomyces dermatitidis; DNA extraction; Pathology; DNA sequencing; Blastomycosis; DNA; Medicine; Genetics; Gene; Immunology","score_opus":0.05690236442366374,"score_gpt":0.39210470447976264,"score_spread":0.3352023400560989,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205741575","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00076870073,0.9736993,0.00012788828,0.00033109277,0.0010799174,0.001454283,0.000051182964,0.00009096405,0.022396693],"genre_scores_gemma":[0.0022730439,0.9938028,0.0008121696,0.00021871971,0.00041397449,0.0006276426,0.00019323207,0.000053585838,0.0016048593],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99691427,0.00023032895,0.0009801541,0.00047556552,0.00087837887,0.000521296],"domain_scores_gemma":[0.9979573,0.0007623122,0.00042869555,0.00047558677,0.00009336937,0.0002827214],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007391187,0.00044341502,0.0030473466,0.0002942835,0.00019940782,0.000005703007,0.0002453203,0.000461536,0.011227047],"category_scores_gemma":[0.00026199888,0.00028485307,0.00029428376,0.00052460533,0.00039579062,0.000033930697,0.0002919928,0.0015157558,0.000050254177],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011696635,0.0014431145,0.0010649296,0.029252516,0.0021496871,0.0009797441,0.00013570073,0.0000034580119,0.0000134037655,0.0028433602,0.0058783665,0.95611876],"study_design_scores_gemma":[0.0009511319,0.0043123197,0.0009782643,0.002360532,0.0015675405,0.0013283428,0.000043396776,0.000042724416,0.000006970286,0.0000037337272,0.9881417,0.00026330192],"about_ca_topic_score_codex":0.000021194908,"about_ca_topic_score_gemma":0.00002404346,"teacher_disagreement_score":0.9822634,"about_ca_system_score_codex":0.00028655666,"about_ca_system_score_gemma":0.0015228476,"threshold_uncertainty_score":0.99996036},"labels":[],"label_agreement":null},{"id":"W4211216967","doi":"10.1080/mmy.38.4.255.287","title":"Tinea capitis","year":2000,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":146,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Tinea capitis; Dermatology; Medicine","score_opus":0.038576107485677205,"score_gpt":0.4068688285905722,"score_spread":0.368292721104895,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4211216967","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000011309399,0.9810751,0.0000013202167,0.00030699998,0.00039429366,0.0006291689,0.00005353411,0.000075968805,0.017452303],"genre_scores_gemma":[0.00000813775,0.9925028,0.000038852773,0.0008843314,0.00072860497,0.00020833447,0.0006351529,0.00005011866,0.004943683],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981324,0.00013576902,0.000493762,0.0004120096,0.00042488062,0.00040117404],"domain_scores_gemma":[0.99853384,0.00024306054,0.00009588768,0.0003552477,0.000021005111,0.0007509334],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00009214516,0.0003207235,0.0020766475,0.0001485934,0.000039051432,0.0000049137757,0.00016197567,0.000828031,0.054001085],"category_scores_gemma":[0.00028490383,0.00021092752,0.00058052235,0.0001882791,0.00015449192,0.000009214564,0.000056869358,0.0005265013,0.0051270262],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001468983,0.00031007014,0.00003301779,0.0045626955,0.00034429962,0.005096771,0.0000028639995,8.390157e-10,2.1213846e-9,0.000071624076,0.01949487,0.9700691],"study_design_scores_gemma":[0.0008981623,0.00031830653,0.000055594108,0.005238585,0.002749148,0.0020065068,6.856444e-7,6.777288e-7,1.7961627e-8,0.000035896963,0.9885537,0.00014272479],"about_ca_topic_score_codex":0.000036510897,"about_ca_topic_score_gemma":0.000005159295,"teacher_disagreement_score":0.96992636,"about_ca_system_score_codex":0.00011574057,"about_ca_system_score_gemma":0.001133397,"threshold_uncertainty_score":0.9956476},"labels":[],"label_agreement":null},{"id":"W4231022997","doi":"10.1093/mmy/myx132","title":"Transcriptional profile of the human skin pathogenic fungus Mucor irregularis in response to low oxygen","year":2017,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Mucor; Fungus; Microbiology; Biology; Botany","score_opus":0.017429812420373524,"score_gpt":0.3134301501019337,"score_spread":0.2960003376815602,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4231022997","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9843165,0.00009271867,0.00006234192,0.013734998,0.00026128205,0.00053232297,0.000025563142,0.000011287797,0.0009629678],"genre_scores_gemma":[0.9957377,0.000009322147,0.00012382057,0.0011606083,0.00011607214,0.000053239906,0.0000069947832,0.000011181089,0.0027810687],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9981039,0.00032642213,0.00039771732,0.00031352136,0.0005510037,0.00030741116],"domain_scores_gemma":[0.99865615,0.00017773129,0.000096193435,0.0007599823,0.00008396607,0.00022595748],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0015883396,0.00011466177,0.0003899676,0.0000765423,0.000172516,0.0000063246475,0.00044775443,0.00028225838,0.0023929416],"category_scores_gemma":[0.0032455437,0.00007735619,0.00015659587,0.000093138784,0.00054540264,0.000030542593,0.00011199887,0.00036382765,0.000041658932],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005403833,0.00092965213,0.35302028,0.00019139827,0.00005516895,0.00039322968,0.0007910866,6.3116937e-7,0.62502337,0.0016752654,0.0042065955,0.008309479],"study_design_scores_gemma":[0.0015861603,0.00036275643,0.9908988,0.00011066358,0.00002424849,0.000022224216,0.00007579445,0.000032335756,0.0018325783,0.0002111412,0.0047716633,0.000071635164],"about_ca_topic_score_codex":0.00009759451,"about_ca_topic_score_gemma":0.00089849863,"teacher_disagreement_score":0.63787854,"about_ca_system_score_codex":0.000087450884,"about_ca_system_score_gemma":0.0004746206,"threshold_uncertainty_score":0.998519},"labels":[],"label_agreement":null},{"id":"W4234185301","doi":"10.1080/714031141","title":"Effect of CD40 ligand on the course of murine histoplasmosis","year":2002,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Research & Development Corporation","funders":"","keywords":"Histoplasmosis; Amphotericin B; Spleen; Histoplasma; Microbiology; Immune system; CD40; Immunology; Inoculation; Biology; Ratón; Mycosis; Histoplasma capsulatum; Antifungal; In vitro; Cytotoxic T cell; Biochemistry","score_opus":0.0131348334047641,"score_gpt":0.2803783984741136,"score_spread":0.2672435650693495,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4234185301","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9746155,0.00069834245,0.0000047541384,0.009792083,0.000292154,0.00016372229,0.0000029664789,0.000012739304,0.014417753],"genre_scores_gemma":[0.9982196,0.00033115482,0.0000067852015,0.0005918174,0.00008327613,0.00002382759,8.778807e-7,0.0000052980204,0.0007373532],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99928385,0.00010482221,0.00019777575,0.00009530405,0.00019658546,0.00012167181],"domain_scores_gemma":[0.99805623,0.0016164704,0.000055813674,0.00015997626,0.00004382092,0.00006770637],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00040351317,0.00007712588,0.00037159992,0.000043808686,0.00004287786,4.9794164e-7,0.000056341185,0.00010605516,0.002690666],"category_scores_gemma":[0.0013858598,0.00003832504,0.000083382445,0.00012176594,0.00037607626,0.0000046462915,0.00003106328,0.00020355899,0.000040974206],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015764938,0.004789322,0.20841385,0.0012941561,0.001424373,0.0003502179,0.0016936085,0.000007106118,0.020707207,0.0073428494,0.6608623,0.09153852],"study_design_scores_gemma":[0.018250221,0.08026756,0.23155071,0.001347315,0.001862102,0.0009784941,0.00034181948,0.0034075887,0.34238675,0.0002900093,0.31876278,0.00055464794],"about_ca_topic_score_codex":0.00002709019,"about_ca_topic_score_gemma":0.000011550309,"teacher_disagreement_score":0.34209952,"about_ca_system_score_codex":0.000018235245,"about_ca_system_score_gemma":0.000015835665,"threshold_uncertainty_score":0.998221},"labels":[],"label_agreement":null},{"id":"W4237691932","doi":"10.1080/714030949","title":"Tinea capitis","year":2000,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Tinea capitis; Dermatology; Medicine","score_opus":0.004743894208583431,"score_gpt":0.28031327635629927,"score_spread":0.2755693821477158,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4237691932","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92835325,0.00055248913,0.0000065356826,0.0066077784,0.00013934204,0.00013839568,0.0000057886505,0.000066072374,0.06413037],"genre_scores_gemma":[0.984444,0.0003161561,0.000106830055,0.005309293,0.0002551134,0.000026435628,0.000039004804,0.000009781885,0.009493335],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99924064,0.000027371174,0.00012748675,0.0001536451,0.00023457996,0.00021630581],"domain_scores_gemma":[0.9993695,0.000056025423,0.000010917736,0.000135649,0.000015617188,0.00041227968],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000049281833,0.000071260176,0.00018814196,0.000028503668,0.000031305175,0.000002127173,0.000049835944,0.0001237064,0.15126236],"category_scores_gemma":[0.00012608839,0.000052471107,0.000062307954,0.00007279475,0.0000945419,0.000010938834,0.000012375514,0.000113066395,0.0031155145],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043589153,0.0013716778,0.13705473,0.00004681189,0.00020803667,0.007725834,0.00006932532,2.3777315e-7,0.00007394881,0.00092739874,0.07315424,0.77893186],"study_design_scores_gemma":[0.005129519,0.0008880665,0.43461815,0.000043596465,0.00017388948,0.0009623742,0.000010114014,0.00010843953,0.000078804114,0.0005398447,0.5573421,0.000105113286],"about_ca_topic_score_codex":0.000075107346,"about_ca_topic_score_gemma":0.00001047401,"teacher_disagreement_score":0.7788268,"about_ca_system_score_codex":0.000025942883,"about_ca_system_score_gemma":0.00011570288,"threshold_uncertainty_score":0.9976607},"labels":[],"label_agreement":null},{"id":"W4246389663","doi":"10.1080/714031037","title":"Comparative efficacies of commonly used disinfectants and antifungal pharmaceutical spray preparations against dermatophytic fungi","year":2001,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; University of Toronto; Mediprobe Research (Canada); Sunnybrook Health Science Centre; Ministry of Health and Long Term Care","funders":"","keywords":"Trichophyton; Bifonazole; Microbiology; Terbinafine; Ammonium; Microsporum; Chemistry; Fungicide; Dermatophyte; Griseofulvin; Sodium hypochlorite; Trichophyton tonsurans; Biology; Antifungal; Organic chemistry; Medicine; Botany; Dermatology","score_opus":0.039700681229219485,"score_gpt":0.3776373371903428,"score_spread":0.3379366559611233,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4246389663","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929021,0.001495746,0.00009257797,0.001011697,0.00013457867,0.00043759955,0.000028414697,0.000044706794,0.0038525986],"genre_scores_gemma":[0.9985466,0.0005264263,0.00008648063,0.0005833898,0.00006606129,0.000025636102,0.00005535626,0.000009810222,0.00010022248],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99867433,0.00013873819,0.00033603216,0.00023410717,0.0003354345,0.00028137566],"domain_scores_gemma":[0.99869657,0.000526244,0.000071522234,0.0001719655,0.0000667944,0.00046689707],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000109145505,0.00015546884,0.0005652097,0.000086235515,0.00008212798,0.0000053188714,0.00006755639,0.00014125707,0.0006675709],"category_scores_gemma":[0.00021127939,0.00011898333,0.0000817889,0.00019421903,0.0005006371,0.000044917902,0.000060381168,0.00019391156,0.000050088885],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00094944716,0.003035899,0.9786245,0.00015515418,0.0005907265,0.0013128216,0.0004801868,0.0000038163566,0.006893602,0.0008914106,0.0016963199,0.005366075],"study_design_scores_gemma":[0.009772531,0.0009927893,0.97231066,0.0001830782,0.0006593629,0.0007922933,0.000135088,0.002638084,0.0032225642,0.000120130084,0.008961917,0.00021147735],"about_ca_topic_score_codex":0.0000075340095,"about_ca_topic_score_gemma":0.000019529149,"teacher_disagreement_score":0.008823083,"about_ca_system_score_codex":0.00002927319,"about_ca_system_score_gemma":0.0001795946,"threshold_uncertainty_score":0.7309433},"labels":[],"label_agreement":null},{"id":"W4280521318","doi":"10.1093/mmy/myac032","title":"Serial (1–3)-beta-D-Glucan (BDG) monitoring shows high variability among premature neonates","year":2022,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Neonatal and Maternal Infections","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; Medical Research Council Canada","keywords":"Medicine; Gestational age; Birth weight; Blood sampling; Prospective cohort study; Pediatrics; Internal medicine; Gastroenterology; Pregnancy; Biology","score_opus":0.009349852503917807,"score_gpt":0.26166000327718736,"score_spread":0.25231015077326957,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4280521318","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9869651,0.00009884475,0.00008760897,0.0042499057,0.0055331322,0.00040400302,0.000039778126,0.00019904149,0.0024225595],"genre_scores_gemma":[0.99505174,0.000018617477,0.0002570325,0.0007329157,0.0014794989,0.0002952664,0.000052384974,0.00002383184,0.0020887298],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979091,0.00030191898,0.00035971258,0.0003956228,0.00061747147,0.00041616743],"domain_scores_gemma":[0.9987962,0.00034590534,0.00008160897,0.0002966294,0.00006583374,0.00041381025],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007697581,0.00017609238,0.00044480737,0.00009666791,0.00029073303,0.000011679664,0.00021778658,0.00023565647,0.018987002],"category_scores_gemma":[0.00051980576,0.00014683841,0.00011998108,0.00023043106,0.00023016121,0.000061384606,0.0004122854,0.001083523,0.000041325035],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024877659,0.0031466074,0.8686365,0.0006961665,0.00081973977,0.004301212,0.0012157748,0.00019798383,0.036616467,0.019892009,0.019624226,0.042365566],"study_design_scores_gemma":[0.004636274,0.002197447,0.80058426,0.00009180194,0.0003614266,0.0020799446,0.00028711482,0.0002790159,0.00832599,0.007493987,0.17315535,0.00050735835],"about_ca_topic_score_codex":0.0008817391,"about_ca_topic_score_gemma":0.000058877427,"teacher_disagreement_score":0.15353113,"about_ca_system_score_codex":0.0001944893,"about_ca_system_score_gemma":0.00022759991,"threshold_uncertainty_score":0.98190975},"labels":[],"label_agreement":null},{"id":"W4283073104","doi":"10.1093/mmy/myac046","title":"Aspergillosis in a colony of Humboldt penguins (<i>Spheniscus humboldti</i>) under managed care: a clinical and environmental investigation in a French zoological park","year":2022,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotel Dieu Hospital","funders":"","keywords":"Aspergillus fumigatus; Aspergillosis; Biology; Incidence (geometry); Population; Microsatellite; Aspergillus; Zoology; Veterinary medicine; Ecology; Gene; Microbiology; Medicine; Immunology; Genetics; Environmental health","score_opus":0.019797419713243662,"score_gpt":0.29460487360007925,"score_spread":0.2748074538868356,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283073104","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956506,0.0009087285,0.000013106091,0.0019525551,0.00015141192,0.0005351666,0.000018624032,0.000016820959,0.00075299514],"genre_scores_gemma":[0.9969066,0.00028327972,0.00020102567,0.0022482022,0.00004933386,0.00012663376,0.000063685635,0.000011975464,0.00010927871],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9966754,0.0009821999,0.00086332136,0.00054542464,0.00058509945,0.0003486071],"domain_scores_gemma":[0.9987175,0.0006295034,0.0001147159,0.00025673056,0.00001392291,0.00026765934],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0015426304,0.00015730203,0.00074210076,0.00014512619,0.00008033302,0.0000030753897,0.00016515503,0.00032910373,0.0021811381],"category_scores_gemma":[0.0010213469,0.0001386911,0.00010383406,0.00029309213,0.0011521693,0.000029939429,0.00039631195,0.0010399288,0.0000058883243],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041574586,0.0007184144,0.993267,0.00006810808,0.000027088907,0.0004967497,0.0008147167,0.000005322664,0.0013355585,0.00046597476,0.00035143812,0.0020338877],"study_design_scores_gemma":[0.0038049628,0.0013991867,0.98949814,0.000033018445,0.000051515024,0.000045214387,0.003133205,0.00019438729,0.000049133418,0.0011885414,0.00047894559,0.00012376814],"about_ca_topic_score_codex":0.00036658894,"about_ca_topic_score_gemma":0.0021189447,"teacher_disagreement_score":0.0037688727,"about_ca_system_score_codex":0.0002046645,"about_ca_system_score_gemma":0.00027196438,"threshold_uncertainty_score":0.998731},"labels":[],"label_agreement":null},{"id":"W4283382392","doi":"10.1093/mmy/myac047","title":"Clinical and microbiological analysis of fungal keratitis in Toronto, Canada: A 20-year study","year":2022,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Ocular Infections and Treatments","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto","funders":"American Pain Foundation","keywords":"Fungal keratitis; Keratitis; Medicine; Geography; Biology; Microbiology; Dermatology","score_opus":0.012494905085804331,"score_gpt":0.3310944325094289,"score_spread":0.3185995274236246,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283382392","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978006,0.00030244296,0.00000403246,0.00053462136,0.00020091153,0.00024953356,0.000035296525,0.000006451493,0.00086611486],"genre_scores_gemma":[0.99915844,0.000049098908,0.000053545788,0.0005003419,0.000030724303,0.000049567054,0.00004228235,0.0000036603642,0.00011231804],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99860144,0.00040420025,0.00039422314,0.0002361818,0.00021079816,0.00015315856],"domain_scores_gemma":[0.99942875,0.00022224202,0.000047689387,0.00013493383,0.000024189314,0.00014220731],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00054438296,0.00007192156,0.00056233024,0.00008238709,0.000055625093,0.0000013320849,0.000053292726,0.00008480111,0.009375925],"category_scores_gemma":[0.0002814963,0.00005610058,0.00007430194,0.00029182786,0.00011711572,0.000008160695,0.00013051204,0.00026213954,8.6996295e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000092031776,0.0016458427,0.9938095,0.000003252757,0.00090586266,0.00094593456,0.000043576096,0.000002603278,0.000016723405,0.00008355686,0.00072617125,0.0017249486],"study_design_scores_gemma":[0.0026461312,0.0021498413,0.99086326,0.000002321702,0.00062528806,0.00008440817,0.00052805286,0.00013835245,0.0000016660309,0.000004606265,0.002912072,0.000044008873],"about_ca_topic_score_codex":0.33702865,"about_ca_topic_score_gemma":0.8942003,"teacher_disagreement_score":0.55717164,"about_ca_system_score_codex":0.0002366686,"about_ca_system_score_gemma":0.00041366107,"threshold_uncertainty_score":0.99152964},"labels":[],"label_agreement":null},{"id":"W4292407378","doi":"10.1093/mmy/myac056","title":"<i>Cryptococcus neoformans</i> can utilize ferritin as an iron source","year":2022,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"National Research Foundation of Korea; National Institute of Allergy and Infectious Diseases; Ministry of Science, ICT and Future Planning; Canadian Institute for Advanced Research; Burroughs Wellcome Fund","keywords":"Cryptococcus neoformans; Ferritin; Microbiology; Biology; Cryptococcus; Iron deficiency; Cryptococcosis; Fungus; Intracellular; Biochemistry; Medicine; Botany; Anemia","score_opus":0.013003137020792957,"score_gpt":0.2944924778621057,"score_spread":0.2814893408413127,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4292407378","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95314556,0.00026355864,0.00009032725,0.014835413,0.0008691963,0.0004022592,0.000013533849,0.00017623171,0.030203924],"genre_scores_gemma":[0.9813271,0.00006623048,0.000068600886,0.0139735015,0.00036018694,0.000310809,0.000050302282,0.00002080868,0.0038224466],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99837303,0.00019500162,0.00026500865,0.0002786224,0.00046199549,0.00042636768],"domain_scores_gemma":[0.9991374,0.00016840677,0.000043785756,0.00023402671,0.000041563722,0.00037483653],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00048393774,0.00013460296,0.00034361403,0.00010409837,0.0005064127,0.0000060377542,0.00013692593,0.00012570454,0.01631481],"category_scores_gemma":[0.00042858644,0.000116119554,0.00008076749,0.00022005221,0.00022671535,0.000023168244,0.00025086995,0.0007207112,0.000094880044],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002840988,0.008471275,0.19130918,0.0005161884,0.0006760504,0.006577624,0.0103968745,0.00015824698,0.00868005,0.034102276,0.5076604,0.22861087],"study_design_scores_gemma":[0.0021901953,0.0042788493,0.018610127,0.000013309008,0.00007884936,0.0017735278,0.0018650893,0.00055457884,0.00010519533,0.00048397377,0.9698694,0.00017694598],"about_ca_topic_score_codex":0.00073770015,"about_ca_topic_score_gemma":0.00030079085,"teacher_disagreement_score":0.462209,"about_ca_system_score_codex":0.00013753113,"about_ca_system_score_gemma":0.00025692655,"threshold_uncertainty_score":0.9845844},"labels":[],"label_agreement":null},{"id":"W4296480011","doi":"10.1093/mmy/myac072.p305","title":"P305 Cirrhosis and fungal infections-a cocktail for catastrophe: a systematic review and meta-analysis with machine learning","year":2022,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Health Systems, Economic Evaluations, Quality of Life","field":"Economics, Econometrics and Finance","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Internal medicine; Relative risk; Meta-analysis; Cirrhosis; Fungemia; Gastroenterology; Surgery; Confidence interval; Mycosis","score_opus":0.4544312004771457,"score_gpt":0.4721160396498215,"score_spread":0.017684839172675826,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4296480011","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000023069292,0.9864314,0.0016654056,0.0062057897,0.00010728608,0.0043041585,0.0011327211,0.0000429551,0.00010795142],"genre_scores_gemma":[0.000016396596,0.9840717,0.00046518334,0.0058739153,0.000073910895,0.008245867,0.0005182283,0.000061160405,0.0006736631],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.99011916,0.0025623788,0.0056339367,0.0010322282,0.0001844733,0.00046781826],"domain_scores_gemma":[0.9861548,0.008293797,0.004526119,0.0005671495,0.00005281053,0.00040533842],"candidate_categories":["metaresearch","metaepi_narrow","metaepi_broad","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.024282604,0.00049525325,0.015034161,0.0007876941,0.0004222416,0.00005701488,0.00033927843,0.0003908296,0.007250998],"category_scores_gemma":[0.015852349,0.00041778205,0.0010508844,0.0007275137,0.00017730988,0.00010464323,0.00019774535,0.00083967147,0.000103411876],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000029652058,0.00008034356,0.00015768998,0.9219967,0.070935786,0.000006959332,0.00008144856,0.0000033803403,2.0701132e-10,0.004036305,0.0021632707,0.00053514616],"study_design_scores_gemma":[0.00026170793,0.00031648893,0.0000056467584,0.0030852824,0.2685745,0.0002197338,0.00003630207,0.000259156,4.2158727e-10,0.00008963376,0.72678155,0.0003699516],"about_ca_topic_score_codex":0.00040096315,"about_ca_topic_score_gemma":0.00034770978,"teacher_disagreement_score":0.9189114,"about_ca_system_score_codex":0.00037228953,"about_ca_system_score_gemma":0.00036130208,"threshold_uncertainty_score":0.9998274},"labels":[],"label_agreement":null},{"id":"W4296515891","doi":"10.1093/mmy/myac072.s8.5c","title":"S8.5c MLST genotyping and phylogenetics of AD-hybrids","year":2022,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Multilocus sequence typing; Genotyping; Biology; Genotype; Allele; Genetics; Cryptococcus neoformans; Locus (genetics); Typing; Population; Haplotype; Hybrid; Gene; Medicine","score_opus":0.011265893094912657,"score_gpt":0.2723450937884784,"score_spread":0.2610792006935657,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4296515891","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9881221,0.0037257434,0.00013976991,0.0036807447,0.00045549744,0.00013264715,0.000009288093,0.000021258975,0.0037129524],"genre_scores_gemma":[0.9974208,0.0005389996,0.00024869238,0.0013043979,0.000092083865,0.00003337429,0.0000056557533,0.000007359694,0.0003486282],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992521,0.00006714269,0.00018581776,0.00013569053,0.00020533957,0.00015394833],"domain_scores_gemma":[0.999546,0.00017698124,0.00003655061,0.000100898724,0.000036550045,0.000103016995],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00025465208,0.00006233214,0.0002572623,0.00007283979,0.0001437556,0.0000010934184,0.000045750512,0.00005378477,0.002023606],"category_scores_gemma":[0.00035363607,0.000053740612,0.00003641562,0.00013043989,0.00022848045,0.0000044260178,0.00020543215,0.00025801017,0.0000046153996],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009988261,0.0026564812,0.60420215,0.0009982948,0.001423674,0.001519294,0.004262106,0.00007478526,0.080991425,0.010968832,0.071449086,0.22045507],"study_design_scores_gemma":[0.0033315914,0.004888993,0.49514675,0.00004631617,0.00026708303,0.0017783785,0.0010260671,0.0014136835,0.0013196527,0.00090043974,0.48964408,0.00023696401],"about_ca_topic_score_codex":0.000034460914,"about_ca_topic_score_gemma":0.00001671462,"teacher_disagreement_score":0.418195,"about_ca_system_score_codex":0.000028255798,"about_ca_system_score_gemma":0.000087870445,"threshold_uncertainty_score":0.9988887},"labels":[],"label_agreement":null},{"id":"W4296516176","doi":"10.1093/mmy/myac072.p207","title":"P207 A rare case of disseminated Blastomycosis in an immunocompetent host: A report from North India","year":2022,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Abdomen; Dysuria; Blastomycosis; Blastomyces dermatitidis; Pathology; Dermatology; Surgery; Urinary system; Internal medicine","score_opus":0.01069662937795276,"score_gpt":0.2935445636115475,"score_spread":0.2828479342335948,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4296516176","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974248,0.00043702355,0.0000070043284,0.00079365104,0.0003613606,0.00029522445,0.000063835025,0.00003484324,0.00058224885],"genre_scores_gemma":[0.9989878,0.00003990082,0.00009040385,0.00029210644,0.00006352411,0.00023762025,0.0001617666,0.000012628208,0.00011427951],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99848515,0.00018463848,0.0005156278,0.00028822318,0.00028780373,0.00023855832],"domain_scores_gemma":[0.99903494,0.0003129574,0.00012284023,0.000283716,0.00007371144,0.00017184434],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00034639094,0.00011827555,0.0005055029,0.00021557529,0.00012994416,0.0000023162545,0.000091396425,0.000100821235,0.0035543593],"category_scores_gemma":[0.0006872234,0.00010182914,0.00007993748,0.00048585408,0.00016484187,0.000023653965,0.00023805513,0.0005652399,0.0000051230077],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000334947,0.001467802,0.8757728,0.000034100896,0.00016003635,0.1141609,0.00196084,0.00000420068,0.0016730309,0.000036598125,0.001593008,0.0028017494],"study_design_scores_gemma":[0.0017824051,0.0018393414,0.9695661,0.00004470621,0.000099591336,0.018155415,0.0023525562,0.0003256037,0.0001786206,0.000025211688,0.0055052494,0.00012520775],"about_ca_topic_score_codex":0.0024234576,"about_ca_topic_score_gemma":0.0027573712,"teacher_disagreement_score":0.09600549,"about_ca_system_score_codex":0.00012934992,"about_ca_system_score_gemma":0.00019592124,"threshold_uncertainty_score":0.99735653},"labels":[],"label_agreement":null},{"id":"W4319300315","doi":"10.1093/mmy/myad016","title":"Cryptococcosis in domestic and wild animals: A review","year":2023,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior","keywords":"Cryptococcosis; Cryptococcus gattii; Cryptococcus; Medicine; Etiology; Amphotericin B; Intensive care medicine; Flucytosine; Pathology; Antifungal; Biology; Dermatology; Microbiology","score_opus":0.10339302370831982,"score_gpt":0.4660546464714386,"score_spread":0.3626616227631188,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319300315","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000076417755,0.99465084,0.0000023585133,0.0021364037,0.00028741546,0.0014918372,0.000008101263,0.000075225274,0.0013401564],"genre_scores_gemma":[0.0000044954772,0.99698627,0.000042204978,0.0012531277,0.00023275417,0.0011286123,0.000019992316,0.000037265545,0.0002952893],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979336,0.0002592052,0.00078933884,0.00042222545,0.00025337763,0.00034221396],"domain_scores_gemma":[0.99786466,0.0014977291,0.00012565921,0.00022511717,0.000038775142,0.0002480431],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009016296,0.00028873284,0.003181246,0.00031900342,0.000048216258,0.000004588854,0.00009649494,0.00052885123,0.00081504026],"category_scores_gemma":[0.0060950583,0.000192066,0.00023403305,0.00081197306,0.00024473516,0.000010169372,0.0001937161,0.0009069587,0.00034336073],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005107963,0.00010051659,0.000113206115,0.18184622,0.00024209393,0.0016971066,0.000012763278,2.2902797e-9,3.8894463e-8,0.00039176273,0.025754848,0.78983635],"study_design_scores_gemma":[0.00027484592,0.00029472986,0.00029459214,0.1379162,0.0010150151,0.0013350897,0.000003951086,0.0000016678407,2.368784e-9,0.00006521657,0.8586708,0.00012792944],"about_ca_topic_score_codex":0.000048513666,"about_ca_topic_score_gemma":0.00007393082,"teacher_disagreement_score":0.8329159,"about_ca_system_score_codex":0.0001032379,"about_ca_system_score_gemma":0.00039878328,"threshold_uncertainty_score":0.8924119},"labels":[],"label_agreement":null},{"id":"W4384120576","doi":"10.1093/mmy/myad069","title":"<i>In vitro</i> combination of antifungal drugs with tacrolimus (FK506) holds promise against clinical <i>Candida</i> species, including <i>Candida auris</i>","year":2023,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University","funders":"Tehran University of Medical Sciences and Health Services","keywords":"Anidulafungin; Caspofungin; Tacrolimus; Itraconazole; Fluconazole; Echinocandin; Calcineurin; Microbiology; Pharmacology; Candida parapsilosis; Candida glabrata; Candida auris; Candida albicans; Biology; Medicine; Chemistry; Antifungal; Internal medicine; Transplantation","score_opus":0.027043735941226665,"score_gpt":0.3341809677153878,"score_spread":0.30713723177416113,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4384120576","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98400724,0.0001578021,0.00009067532,0.0055716727,0.0006388016,0.0008258765,0.00003781495,0.00013849865,0.008531597],"genre_scores_gemma":[0.99302346,0.0007609315,0.00015062488,0.0037805112,0.0003699732,0.000059854607,0.00015849699,0.000044737844,0.0016514207],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99547774,0.0004272108,0.0013040841,0.0007542991,0.001224136,0.00081253104],"domain_scores_gemma":[0.99729717,0.0011091576,0.00030843637,0.00054528884,0.0002150732,0.0005248489],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0031053934,0.00031469634,0.001312202,0.00032255615,0.00012546685,0.000013419128,0.00031828787,0.00061104493,0.00037537378],"category_scores_gemma":[0.0018114544,0.00024742814,0.00021894072,0.0012814259,0.001122283,0.00013101351,0.0002163921,0.0010737387,0.000090225105],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011472374,0.0030735391,0.83526886,0.00089863455,0.00026145994,0.0043278667,0.00096741633,0.0000052029072,0.0773657,0.0010493309,0.05495436,0.010355237],"study_design_scores_gemma":[0.032552138,0.00420314,0.87055296,0.0010704097,0.0003123359,0.00018557177,0.0013026211,0.0016969029,0.02950219,0.000720169,0.05701234,0.00088925415],"about_ca_topic_score_codex":0.00008540092,"about_ca_topic_score_gemma":0.00014538383,"teacher_disagreement_score":0.047863506,"about_ca_system_score_codex":0.00017763635,"about_ca_system_score_gemma":0.0010114379,"threshold_uncertainty_score":0.9999978},"labels":[],"label_agreement":null},{"id":"W4387948603","doi":"10.1093/mmy/myad106","title":"Time to treat the climate and nature crisis as one indivisible global health emergency","year":2023,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Climate Change and Health Impacts","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Global health; Coronavirus disease 2019 (COVID-19); Climate change; Political science; Business; Medicine; Public health; Biology; Ecology; Internal medicine; Nursing","score_opus":0.024847424344187484,"score_gpt":0.3689329546979471,"score_spread":0.34408553035375966,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387948603","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.74797463,0.0002534159,0.0000018749893,0.24371774,0.000252499,0.00030260909,0.000048980586,0.00007836208,0.0073698545],"genre_scores_gemma":[0.8558413,0.010235048,0.00009514972,0.13131972,0.0005158083,0.00012081227,0.00008814144,0.000031782518,0.0017522273],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99817276,0.00012808075,0.00023222831,0.00029596206,0.00042898383,0.0007419908],"domain_scores_gemma":[0.9989142,0.00010680255,0.00004832557,0.00018661753,0.000004488216,0.0007395676],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00088800257,0.00011048502,0.00021599128,0.0000325163,0.00028357745,0.000008499419,0.00023756947,0.00023057684,0.04302147],"category_scores_gemma":[0.00034726894,0.00007538119,0.000025502679,0.0006272562,0.00012273176,0.00003905465,0.00049658056,0.00027327365,0.016068053],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038004764,0.00007730147,0.01564811,0.0000382505,0.00000630792,0.00004114222,0.0010447844,0.0000028551972,0.000052216183,0.00018635628,0.9456554,0.037209243],"study_design_scores_gemma":[0.0006615768,0.0012740222,0.84218967,0.000037757,0.000023255703,0.00008870139,0.0005382591,0.00020643685,0.000020264493,0.0047146236,0.15001397,0.00023146553],"about_ca_topic_score_codex":0.00057943177,"about_ca_topic_score_gemma":0.00072361086,"teacher_disagreement_score":0.82654154,"about_ca_system_score_codex":0.00015580015,"about_ca_system_score_gemma":0.000042031523,"threshold_uncertainty_score":0.98469806},"labels":[],"label_agreement":null},{"id":"W4388870346","doi":"10.1093/mmy/myad119","title":"Genotypic diversity and antifungal susceptibility of <i>Cryptococcus neoformans</i> species complex from China, including the diploid VNIII isolates from HIV-infected patients in Chongqing region","year":2023,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"National Natural Science Foundation of China; Università degli Studi di Milano","keywords":"Cryptococcus neoformans; Biology; Genotype; Ploidy; Antifungal; Microbiology; Cryptococcus; Cryptococcosis; Genetic diversity; Virology; Genetics; Gene; Medicine; Environmental health","score_opus":0.04046355689408507,"score_gpt":0.27238680910923385,"score_spread":0.23192325221514878,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388870346","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971695,0.000110673784,0.00009095039,0.0013374635,0.000342148,0.00040693744,0.000054039043,0.00007369319,0.00041457496],"genre_scores_gemma":[0.9989443,0.00047863188,0.00003809097,0.00019411328,0.00014170785,0.000011251265,0.00014029909,0.000009257174,0.000042354368],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99855703,0.00017361298,0.00038148783,0.00030908702,0.0002629553,0.00031580954],"domain_scores_gemma":[0.99864644,0.00084216055,0.000109154986,0.00021571817,0.00007586464,0.000110634915],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032350258,0.0001584115,0.0005097815,0.00013457598,0.00057468296,0.0000068377853,0.00013196659,0.00018316205,0.00045592603],"category_scores_gemma":[0.0008691556,0.000109404464,0.00007163193,0.00037788454,0.0005208113,0.000060474882,0.0011796652,0.0004337769,0.000020985119],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018144278,0.00018155061,0.99092144,0.000033155564,0.00007920891,0.000026321466,0.0025078657,0.0000028774045,0.0037296505,0.000043389908,0.0013546299,0.00093847717],"study_design_scores_gemma":[0.0018881308,0.0002678208,0.99518275,0.000090905014,0.00006240206,0.0000027832778,0.00037722063,0.00076297217,0.00016579685,0.00042772197,0.0006772603,0.00009425523],"about_ca_topic_score_codex":0.003699732,"about_ca_topic_score_gemma":0.0020920478,"teacher_disagreement_score":0.0042613004,"about_ca_system_score_codex":0.0000795353,"about_ca_system_score_gemma":0.000034158424,"threshold_uncertainty_score":0.55929124},"labels":[],"label_agreement":null},{"id":"W4390120279","doi":"10.1093/mmy/myad134","title":"Machine learning to identify clinically relevant <i>Candida</i> yeast species","year":2023,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canada Foundation for Innovation; Government of Alberta","keywords":"Candida albicans; Budding yeast; Candida glabrata; Yeast; Biology; Corpus albicans; Candida auris; Convolutional neural network; Artificial intelligence; Microbiology; Candida infections; Antifungal; Saccharomyces cerevisiae; Computer science; Biochemistry","score_opus":0.030598132909327724,"score_gpt":0.3647091864544804,"score_spread":0.3341110535451527,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390120279","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96367836,0.00015081181,0.0004694248,0.020808376,0.0007716865,0.0003394314,0.000013013837,0.00034863723,0.013420256],"genre_scores_gemma":[0.97399724,0.00057722675,0.0001978553,0.005441222,0.0005107522,0.000024036653,0.000060617345,0.00002526274,0.019165797],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99745667,0.00019047968,0.00059578073,0.00046941914,0.00074488897,0.0005427387],"domain_scores_gemma":[0.9982034,0.0006455869,0.0000676968,0.00032119628,0.000099268065,0.0006628643],"candidate_categories":["metaresearch","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0017371238,0.00015322353,0.00054634444,0.00014822319,0.000121577104,0.0000125548795,0.00020623005,0.00029356807,0.0050499276],"category_scores_gemma":[0.011288951,0.00012017417,0.00015479066,0.00056814903,0.00027442648,0.000027311835,0.00021760997,0.0008143298,0.004312271],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015318664,0.00033605966,0.8630625,0.00018968545,0.000113800736,0.0029010975,0.00058165274,0.0000059060026,0.019075342,0.0010035785,0.08781153,0.023386957],"study_design_scores_gemma":[0.0010621187,0.0009078528,0.7080138,0.00010260605,0.000045024633,0.000057506873,0.00026173762,0.0003253028,0.00012489276,0.0002665138,0.28869933,0.00013331385],"about_ca_topic_score_codex":0.00004547817,"about_ca_topic_score_gemma":0.00017087559,"teacher_disagreement_score":0.2008878,"about_ca_system_score_codex":0.00006469442,"about_ca_system_score_gemma":0.00026298204,"threshold_uncertainty_score":0.9970394},"labels":[],"label_agreement":null},{"id":"W4399477459","doi":"10.1093/mmy/myae061","title":"Clinical spectrum, phenotypic and molecular characterization, and antifungal susceptibility of an emerging human pathogen, <i>Acrophialophora</i>, from India","year":2024,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Science and Engineering Research Board; Department of Science and Technology, Government of Kerala; Indian Council of Medical Research","keywords":"Biology; Caspofungin; Ribosomal DNA; Fluconazole; Ribosomal RNA; Genotype; Locus (genetics); Microbiology; Internal transcribed spacer; Genotyping; Phylogenetic tree; Mycology; Antifungal; Genetics; Gene; Botany","score_opus":0.015630787532967715,"score_gpt":0.3360321471945771,"score_spread":0.3204013596616094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399477459","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99544805,0.0015260695,0.0010258637,0.0009890229,0.00039840926,0.00030727652,0.00010476984,0.000074940945,0.00012561576],"genre_scores_gemma":[0.99756306,0.0005504344,0.0003294819,0.0007359466,0.00040506167,0.0000066013235,0.00034268887,0.000026233645,0.00004051472],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9973609,0.00036366825,0.0007940693,0.00077107863,0.00040162666,0.00030866862],"domain_scores_gemma":[0.9986918,0.0002889076,0.00009210948,0.000393545,0.00007268719,0.00046096058],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0012922125,0.00019912957,0.00071203365,0.00010310395,0.00008047844,0.00001974741,0.00011575958,0.0004360647,0.0012310535],"category_scores_gemma":[0.00072852476,0.00016878707,0.000099136865,0.00022388545,0.0009278568,0.00009087614,0.00011819099,0.0005789581,0.000010054915],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025501364,0.00030873404,0.517704,0.00028990515,0.000101188154,0.0007411574,0.00027625894,1.802234e-8,0.44948375,0.0012023466,0.000052575153,0.029585022],"study_design_scores_gemma":[0.00087662484,0.00081855257,0.99251485,0.00015807322,0.0001532947,0.000042869433,0.00007318659,0.00028160107,0.002004732,0.0017826422,0.0011413672,0.00015221481],"about_ca_topic_score_codex":0.00009167539,"about_ca_topic_score_gemma":0.00016274797,"teacher_disagreement_score":0.4748108,"about_ca_system_score_codex":0.000027686167,"about_ca_system_score_gemma":0.00025370583,"threshold_uncertainty_score":0.99968195},"labels":[],"label_agreement":null},{"id":"W4400515101","doi":"10.1093/mmy/myae068","title":"Growth on Douglas fir media facilitates<i>Cryptococcus</i>virulence factor production and enhances fungal survival against environmental and immune stressors","year":2024,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Cryptococcus gattii; Cryptococcosis; Biology; Cryptococcus neoformans; Cryptococcus; Virulence; Douglas fir; Microbiology; Immune system; Outbreak; Virulence factor; Botany; Immunology; Virology","score_opus":0.013093094004879267,"score_gpt":0.2583890508575632,"score_spread":0.24529595685268393,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400515101","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98685807,0.00527442,0.000013822422,0.0040749307,0.00255835,0.00034622988,0.00007025374,0.000096039556,0.00070788275],"genre_scores_gemma":[0.9916673,0.0071686516,0.000034295357,0.00020798628,0.0005495964,0.000080228194,0.000025537553,0.000014924405,0.00025153047],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984342,0.00011136577,0.0002915144,0.00049520883,0.00037114514,0.00029658133],"domain_scores_gemma":[0.998932,0.00067059253,0.00003210738,0.00012962536,0.000018609697,0.00021709008],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029198636,0.00021053402,0.00038706968,0.0001261256,0.00016554941,0.000020108799,0.000053102834,0.00019227437,0.00059441454],"category_scores_gemma":[0.0010128329,0.00015315575,0.000053869182,0.000109173474,0.0007485259,0.00008077829,0.00009962794,0.00050939055,0.00008127255],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001999891,0.0024768473,0.31217754,0.0028834862,0.0019113134,0.002275887,0.015147089,0.000004917269,0.4512895,0.00521684,0.012647567,0.19196911],"study_design_scores_gemma":[0.0013014195,0.0022574347,0.96174985,0.0005636494,0.0001372286,0.0002592754,0.0013590974,0.00022856981,0.011136064,0.0004394826,0.02015149,0.00041640786],"about_ca_topic_score_codex":0.000037258313,"about_ca_topic_score_gemma":0.000051256866,"teacher_disagreement_score":0.6495724,"about_ca_system_score_codex":0.0000643681,"about_ca_system_score_gemma":0.000050188024,"threshold_uncertainty_score":0.6508422},"labels":[],"label_agreement":null},{"id":"W4403502519","doi":"10.1093/mmy/myae101","title":"Clinical importance of cerebrospinal fluid protein levels in HIV-associated cryptococcal meningitis: Insights from a prospective cohort study in Uganda","year":2024,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Fogarty International Center; National Institute of Allergy and Infectious Diseases; National Institute of Neurological Disorders and Stroke; Medical Research Council; Grand Challenges Canada; Department of Health and Social Care; European and Developing Countries Clinical Trials Partnership; Wellcome Trust; Styrelsen för Internationellt Utvecklingssamarbete","keywords":"Cryptococcal meningitis; Cerebrospinal fluid; Prospective cohort study; Medicine; Human immunodeficiency virus (HIV); Meningitis; Cohort; Cryptococcosis; Immunology; Cohort study; Virology; Internal medicine; Viral disease; Pediatrics","score_opus":0.024706437945130166,"score_gpt":0.34933745352050316,"score_spread":0.324631015575373,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403502519","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99405044,0.00089732057,0.00004625152,0.0007144023,0.00042663768,0.0024648847,0.000023330924,0.00007460333,0.0013021039],"genre_scores_gemma":[0.9985467,0.000031564483,0.0001267891,0.00011226536,0.00020000884,0.0008076911,0.000017964376,0.000020351079,0.00013666552],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9970299,0.0003677336,0.0011746294,0.00061325205,0.00048640886,0.00032810346],"domain_scores_gemma":[0.99880594,0.0006149773,0.00009910706,0.0002000389,0.00011478121,0.00016516268],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010501518,0.00020109453,0.0010928393,0.00024435855,0.000044179626,0.000009343325,0.00010932509,0.0003961152,0.000757925],"category_scores_gemma":[0.0030770968,0.00015656807,0.000116355564,0.0007082179,0.0003497756,0.000054968506,0.00012554556,0.0010634566,0.000030339375],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025498922,0.0022529282,0.99260044,0.000045012548,0.00036620622,0.0015957755,0.0009610478,5.7156353e-7,0.0006522151,0.00057762064,0.0003937072,0.00029946805],"study_design_scores_gemma":[0.003911303,0.002832158,0.9899006,0.0006295411,0.00008638252,0.000016039832,0.00038861835,0.00048817066,0.00009822719,0.0013188858,0.00019629755,0.00013375796],"about_ca_topic_score_codex":0.00072719523,"about_ca_topic_score_gemma":0.0053613535,"teacher_disagreement_score":0.004634158,"about_ca_system_score_codex":0.00030498655,"about_ca_system_score_gemma":0.00051321794,"threshold_uncertainty_score":0.8298747},"labels":[],"label_agreement":null},{"id":"W4403889545","doi":"10.1093/mmy/myae105","title":"Geraniol inhibits both planktonic cells and biofilms of the <i>Candida parapsilosis</i> species complex: Highlight for the improved efficacy of amphotericin B, caspofungin and fluconazole plus Geraniol","year":2024,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Transport Canada","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico","keywords":"Geraniol; Candida parapsilosis; Microbiology; Fluconazole; Broth microdilution; Biology; Amphotericin B; Caspofungin; Ketoconazole; Minimum inhibitory concentration; Pharmacology; Antimicrobial; Chemistry; Botany; Antifungal; Essential oil","score_opus":0.01638267557501571,"score_gpt":0.2699281423496724,"score_spread":0.25354546677465667,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403889545","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9893918,0.0038161208,0.0002949529,0.0044658766,0.00043900992,0.0011339455,0.00024137275,0.00002634199,0.00019056245],"genre_scores_gemma":[0.99721986,0.001130574,0.000114189104,0.0009920063,0.00014571176,0.000035226916,0.000017340113,0.000018148314,0.0003269541],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99838907,0.00010405373,0.0005117146,0.0003635422,0.0003055798,0.00032604494],"domain_scores_gemma":[0.9972651,0.002106235,0.00010226406,0.00031797643,0.0000597393,0.00014867814],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00059530605,0.00019462488,0.0006340972,0.000060237548,0.00011108375,0.000013432327,0.00017235808,0.00021674001,0.00037573875],"category_scores_gemma":[0.00031327855,0.00010022962,0.00014786486,0.00020124254,0.00110851,0.00002629499,0.00011481457,0.0003072079,0.000001547025],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016790495,0.00019105202,0.006294607,0.0012848206,0.00028498695,0.000029475157,0.0010075567,0.0000013384272,0.97424823,0.0020739655,0.00805107,0.004853858],"study_design_scores_gemma":[0.008338819,0.001832607,0.72028935,0.00075137813,0.000742871,0.00019338062,0.00053727755,0.00707793,0.20732096,0.00023851322,0.05232979,0.00034711926],"about_ca_topic_score_codex":0.0001527139,"about_ca_topic_score_gemma":0.00016647115,"teacher_disagreement_score":0.76692724,"about_ca_system_score_codex":0.00004490849,"about_ca_system_score_gemma":0.00035648915,"threshold_uncertainty_score":0.4114076},"labels":[],"label_agreement":null},{"id":"W4406167273","doi":"10.1093/mmy/myae115","title":"The evolution of HIV-associated cryptococcal meningitis in Uganda from 2010 to 2022","year":2024,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Fogarty International Center; National Institute of Neurological Disorders and Stroke; Medical Research Council; National Institute of Allergy and Infectious Diseases; Grand Challenges Canada; Wellcome Trust","keywords":"Medicine; Cryptococcosis; Cohort; Meningitis; Cryptococcal meningitis; Flucytosine; Lumbar puncture; Population; Cohort study; Pediatrics; Prospective cohort study; Internal medicine; Amphotericin B; Human immunodeficiency virus (HIV); Immunology; Cerebrospinal fluid; Viral disease; Antifungal; Environmental health","score_opus":0.008793627784380158,"score_gpt":0.28272413473568325,"score_spread":0.2739305069513031,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406167273","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9702891,0.0030476195,0.0004133868,0.021392662,0.0017145012,0.0002794883,0.00003246755,0.000053256073,0.002777502],"genre_scores_gemma":[0.99795145,0.00017374026,0.00004709648,0.00019820932,0.00019520242,0.000085144486,0.000012893372,0.00000770175,0.0013285929],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9990288,0.00009139814,0.0002693818,0.0001661206,0.00023823709,0.00020603988],"domain_scores_gemma":[0.99879265,0.00092920783,0.000021119085,0.00010163578,0.000051801384,0.00010356964],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00046676354,0.000071384195,0.0002487138,0.00011000201,0.0000716995,0.000005929877,0.00006451849,0.00016795979,0.0012902129],"category_scores_gemma":[0.0021830748,0.000045852714,0.000056151544,0.00040326166,0.00014890636,0.000014420348,0.00007589376,0.00037725983,0.00009693332],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005933681,0.0008459917,0.32599115,0.000117762866,0.00086930697,0.0008872984,0.0032255384,0.000014215147,0.026437309,0.015761415,0.5873738,0.03788288],"study_design_scores_gemma":[0.0015393925,0.0012090799,0.83249474,0.00039709083,0.000096865064,0.00004060074,0.0007811683,0.0029866574,0.0003418181,0.0031306313,0.1568497,0.0001322597],"about_ca_topic_score_codex":0.0013683487,"about_ca_topic_score_gemma":0.0022378918,"teacher_disagreement_score":0.5065036,"about_ca_system_score_codex":0.00024624282,"about_ca_system_score_gemma":0.00020048884,"threshold_uncertainty_score":0.99962276},"labels":[],"label_agreement":null},{"id":"W4407358142","doi":"10.1093/mmy/myaf015","title":"Invasive aspergillosis caused by cryptic species in transplant recipients: A review","year":2025,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Aspergillosis; Species complex; Biology; Medicine; Immunology; Zoology; Genetics","score_opus":0.03375701865844621,"score_gpt":0.3556590731273149,"score_spread":0.32190205446886866,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407358142","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000048275357,0.990463,0.00001896964,0.0020658176,0.0004818756,0.0020087855,0.00012578059,0.000045493467,0.004741992],"genre_scores_gemma":[0.00009955009,0.9886738,0.000021620332,0.0044467794,0.00012822932,0.0004176885,0.0006371628,0.000032532134,0.005542609],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.99532837,0.0007717979,0.0015961339,0.00088486343,0.00077430205,0.00064455526],"domain_scores_gemma":[0.99626905,0.002294785,0.000242427,0.0006649552,0.00009741012,0.0004313744],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0011222684,0.00054268236,0.004895066,0.00030307,0.000050886367,0.0000065624376,0.0004448769,0.0011759844,0.007973598],"category_scores_gemma":[0.0076166606,0.0003840995,0.0007238277,0.00093223975,0.0004079749,0.000031093445,0.000096925745,0.0015563696,0.00026617962],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011539426,0.0009031013,0.0027038031,0.41008523,0.0005117234,0.002927056,0.000060334005,5.42116e-9,0.0000038876897,0.00019895169,0.17408082,0.40840968],"study_design_scores_gemma":[0.00053323567,0.00022989936,0.0007186776,0.2670176,0.0015514989,0.000049410744,0.0000069271987,2.389498e-7,7.1865867e-7,0.000015777565,0.72965604,0.00021995054],"about_ca_topic_score_codex":0.000035024936,"about_ca_topic_score_gemma":0.00033095764,"teacher_disagreement_score":0.55557525,"about_ca_system_score_codex":0.00052100734,"about_ca_system_score_gemma":0.0027529288,"threshold_uncertainty_score":0.9998611},"labels":[],"label_agreement":null},{"id":"W4408139988","doi":"10.1093/mmy/myaf019","title":"Comparison of broth microdilution and Etest® methods for susceptibility testing of amphotericin B in <i>Candida auris</i>","year":2025,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; BC Centre for Disease Control; University of Toronto; Ste. Anne's Hospital; Dr. Georges-L.-Dumont University Hospital Centre; Manitoba Health; Provincial Laboratory of Public Health; University of Calgary; University of Manitoba; Toronto Public Health; Public Health Agency of Canada","funders":"","keywords":"Etest; Candida auris; Broth microdilution; Amphotericin B; Microbiology; Antifungal; Biology; Medicine; Minimum inhibitory concentration; Antibiotics","score_opus":0.041612565146661624,"score_gpt":0.46296985244861455,"score_spread":0.42135728730195293,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408139988","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96911544,0.000882109,0.028043447,0.00066747284,0.00011658634,0.0005795945,0.0000071774152,0.0000139001695,0.0005742891],"genre_scores_gemma":[0.9629405,0.000029551538,0.036601756,0.00031355396,0.000020134443,0.000022801678,0.000008129461,0.0000052445544,0.000058336595],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983178,0.00026657744,0.0007342088,0.00030739192,0.0001410104,0.00023301714],"domain_scores_gemma":[0.99675685,0.0026077768,0.0001518772,0.00022393747,0.00016548391,0.00009404954],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0019743822,0.00010796276,0.0008205418,0.00013028411,0.000030060666,0.0000016327604,0.00008678595,0.0002599167,0.00006699032],"category_scores_gemma":[0.009573229,0.00009124775,0.00006567839,0.0003662141,0.0005565777,0.000019221421,0.00006527005,0.00024488123,3.0189923e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006014456,0.00035172483,0.7510658,0.0008539667,0.000018051891,0.000001825801,0.00014308291,5.9193354e-7,0.20366274,0.00021664808,0.000287982,0.042796157],"study_design_scores_gemma":[0.0024225668,0.0010102747,0.9287125,0.00040449685,0.000082808256,0.0000049385403,0.00025129088,0.0025538171,0.06202849,0.0014458176,0.001006422,0.0000765764],"about_ca_topic_score_codex":0.0003546357,"about_ca_topic_score_gemma":0.0005368936,"teacher_disagreement_score":0.17764671,"about_ca_system_score_codex":0.00007121078,"about_ca_system_score_gemma":0.0003786081,"threshold_uncertainty_score":0.9987696},"labels":[],"label_agreement":null},{"id":"W4409352783","doi":"10.1093/mmy/myaf036","title":"A longitudinal study assessing <i>Aspergillus</i> polymerase chain reaction (PCR) performance through participation in external quality assessment schemes from 2019 to 2022","year":2025,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Aspergillus fumigatus; Aspergillus; Quality assessment; Quality (philosophy); Aspergillus niger; External quality assessment; Biology; Biotechnology; Microbiology; Medicine; Pathology","score_opus":0.026228124107748583,"score_gpt":0.4117430452413863,"score_spread":0.38551492113363767,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409352783","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9191821,0.00021508522,0.07772915,0.0016312513,0.00018511886,0.0004783324,0.000012316133,0.000024840367,0.00054179964],"genre_scores_gemma":[0.99350715,0.00013298503,0.0034711114,0.0019075215,0.00012594592,0.00050983217,0.00016732309,0.000010252654,0.00016788488],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99806714,0.00037631983,0.00046518634,0.000577639,0.0002147361,0.00029900676],"domain_scores_gemma":[0.9992776,0.00006149091,0.00010458532,0.0004036137,0.00005576638,0.00009693018],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007226241,0.00016373974,0.00026020617,0.00007603223,0.000119351476,0.000017875022,0.00025481646,0.00029873347,0.000115948606],"category_scores_gemma":[0.00023114799,0.00015632612,0.000053397653,0.00025577398,0.00009273394,0.000009523277,0.00025557636,0.00029300654,0.000005333644],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011852452,0.0009859173,0.38640788,0.000010323471,0.00005415716,0.000013593943,0.00004807912,0.000007652413,0.5949951,0.0012530321,0.000757116,0.015348648],"study_design_scores_gemma":[0.0010212243,0.0005113885,0.924328,0.000043394815,0.000028510558,0.000004572962,0.00010141596,0.00025183783,0.058616154,0.00034421694,0.014540204,0.00020906844],"about_ca_topic_score_codex":0.00070324674,"about_ca_topic_score_gemma":0.000524015,"teacher_disagreement_score":0.5379201,"about_ca_system_score_codex":0.000069401656,"about_ca_system_score_gemma":0.00021294864,"threshold_uncertainty_score":0.63747936},"labels":[],"label_agreement":null},{"id":"W4409527948","doi":"10.1093/mmy/myaf040","title":"Optimization and clinical evaluation of a 5.8S rRNA quantitative PCR assay for the diagnosis of talaromycosis","year":2025,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Allergy and Infectious Diseases; Dowager Countess Eleanor Peel Trust; Federation of European Microbiological Societies; National Institute for Health and Care Research","keywords":"Penicillium marneffei; DNA extraction; Biology; Whole blood; Polymerase chain reaction; Blood culture; Microbiology; Real-time polymerase chain reaction; Lysis; Dimorphic fungus; Assay sensitivity; White blood cell; Yeast; Molecular biology; Immunology; Medicine; Pathology; Human immunodeficiency virus (HIV); Antibiotics; Gene","score_opus":0.08103670506118105,"score_gpt":0.4495700096001707,"score_spread":0.36853330453898964,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409527948","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8985871,0.0023609716,0.08637014,0.010107846,0.00035995766,0.0013980614,0.000019785804,0.000010922637,0.00078521593],"genre_scores_gemma":[0.99526507,0.0012346699,0.0027643163,0.0004899891,0.000032868797,0.00013636803,0.000014313357,0.000004383873,0.000058021],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998261,0.00045243517,0.00054915674,0.00020287842,0.00041862586,0.000115941766],"domain_scores_gemma":[0.99171364,0.0072858618,0.00015617556,0.00019053121,0.00058782566,0.000065985085],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0054752748,0.00006993418,0.0004103825,0.000062446095,0.000046577337,0.0000019384786,0.00008067251,0.00022401861,0.00043028366],"category_scores_gemma":[0.029723968,0.000044822064,0.00011410993,0.0001947577,0.00058638206,0.000022658214,0.000041532163,0.00015305437,6.793092e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011860837,0.00085702405,0.9043193,0.00037346844,0.0005127452,0.0000019237102,0.00020359832,0.000092989845,0.00018625225,0.0064215893,0.004599257,0.0812458],"study_design_scores_gemma":[0.0043130154,0.0014178536,0.8145834,0.0002910407,0.0015884313,0.0000021169237,0.00055698905,0.17404032,0.0006606134,0.0016283884,0.00085203664,0.0000657741],"about_ca_topic_score_codex":0.000032488784,"about_ca_topic_score_gemma":0.0001315068,"teacher_disagreement_score":0.17394732,"about_ca_system_score_codex":0.000032937594,"about_ca_system_score_gemma":0.00047009846,"threshold_uncertainty_score":0.9784491},"labels":[],"label_agreement":null},{"id":"W4413104788","doi":"10.1093/mmy/myaf072","title":"Spectrum of clinically significant melanized fungi in NIH hospitalized patients and their antifungal susceptibility profiles","year":2025,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"National Institutes of Health","keywords":"Micafungin; Voriconazole; Microbiology; Amphotericin B; Terbinafine; Biology; Phaeohyphomycosis; Antifungal; Internal transcribed spacer; Itraconazole; Ribosomal RNA; Genetics","score_opus":0.008152657075625966,"score_gpt":0.28967741632952887,"score_spread":0.2815247592539029,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413104788","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935618,0.0002981968,0.00023037463,0.0022510272,0.00030398765,0.0009488919,0.000027180626,0.000040575826,0.002337947],"genre_scores_gemma":[0.9983153,0.00034236445,0.00022807962,0.00075628393,0.00004376727,0.000026273301,0.00003886812,0.000012109818,0.00023697478],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9968857,0.0003916774,0.0012657655,0.0006299832,0.00037795407,0.00044889862],"domain_scores_gemma":[0.99789083,0.0010740133,0.0001804432,0.00043581316,0.00016403264,0.00025486574],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0018824541,0.00022883646,0.0011329855,0.00017246681,0.00004569374,0.000005915549,0.0002020838,0.00048027228,0.001016836],"category_scores_gemma":[0.0059082797,0.00016140658,0.00015703336,0.0004011314,0.0009280789,0.000039147617,0.0001684956,0.00057161396,0.000009039131],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024525204,0.0013370387,0.98508817,0.00032730636,0.00007144107,0.000038588067,0.00014263538,5.044301e-8,0.0041930056,0.00074180803,0.000732468,0.0048749703],"study_design_scores_gemma":[0.00526604,0.001292729,0.9887941,0.00021572961,0.00004621548,0.0000020720918,0.00018618618,0.00011514003,0.0017928884,0.0019477715,0.00021733652,0.00012378296],"about_ca_topic_score_codex":0.000099229605,"about_ca_topic_score_gemma":0.00022794641,"teacher_disagreement_score":0.00475346,"about_ca_system_score_codex":0.000088489476,"about_ca_system_score_gemma":0.0006207453,"threshold_uncertainty_score":0.99989635},"labels":[],"label_agreement":null},{"id":"W7116895200","doi":"10.1093/mmy/myaf120","title":"Analytical validation: Comparison of two laboratory-based methods for CSF quantitative cryptococcal cultures","year":2025,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Neurological Disorders and Stroke; Fogarty International Center; National Institute of Allergy and Infectious Diseases","keywords":"Cryptococcal meningitis; Agar; Cerebrospinal fluid; Cryptococcosis; Meningitis; Concordance; Cryptococcus neoformans; Agar plate","score_opus":0.062413678538223244,"score_gpt":0.5471154818882705,"score_spread":0.4847018033500473,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7116895200","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14447658,0.0013933262,0.81526154,0.027761303,0.0013034731,0.0013558095,0.00004168019,0.000110668494,0.008295617],"genre_scores_gemma":[0.8442089,0.00002090565,0.15214051,0.0027717333,0.00017140285,0.0003261283,0.000051454426,0.000011896454,0.0002970499],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987618,0.00026690718,0.00042475195,0.00020720191,0.00015523985,0.00018415324],"domain_scores_gemma":[0.9967554,0.0024288893,0.00007458131,0.00013668908,0.00049369305,0.00011072069],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007466889,0.00010881452,0.0006298691,0.00015100866,0.00010073827,0.0000049645882,0.00007164542,0.00018912868,0.00045456743],"category_scores_gemma":[0.006116576,0.000079546226,0.000120839395,0.00044257377,0.0004226576,0.000017119246,0.00003535046,0.00024558775,0.0000056257795],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001505026,0.0025612374,0.19815232,0.00082751183,0.0011954878,0.000016460679,0.00058650505,0.000102053986,0.008779997,0.6585117,0.115072384,0.012689299],"study_design_scores_gemma":[0.022773672,0.010287625,0.076638095,0.0007198106,0.0025577056,0.00001389025,0.0022274898,0.21938968,0.106184274,0.0143407695,0.5442382,0.00062881596],"about_ca_topic_score_codex":0.00001868883,"about_ca_topic_score_gemma":0.000019401888,"teacher_disagreement_score":0.6997323,"about_ca_system_score_codex":0.00004745109,"about_ca_system_score_gemma":0.00037229044,"threshold_uncertainty_score":0.73225546},"labels":[],"label_agreement":null}]}