{"meta":{"query_hash":"0e335805b1a8","filters":{"venue":"Medical Mycology"},"cohort_total":137,"direct_labels_cover":0,"predictions_cover":137,"exported":137,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/0e335805b1a8","api":"https://metacan.xera.ac/api/v1/cohort?venue=Medical+Mycology"},"results":[{"id":"W1263402079","doi":"10.1093/mmy/myv061","title":"Pitfalls in Serological Diagnosis of<i>Cryptococcus gattii</i>Infections","year":2015,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Qatar Foundation","keywords":"Cryptococcus gattii; Cryptococcosis; Cryptococcus neoformans; Serology; Cryptococcus; Latex fixation test; Antigen; Biology; Virology; Microbiology; Antibody; Immunology","score_opus":0.0471112402666648,"score_gpt":0.3365515910402811,"score_spread":0.2894403507736163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1263402079","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.80064017,0.081075385,0.04530734,0.02539705,0.004220634,0.0005055917,0.0005012903,0.0017120698,0.040640503],"genre_scores_gemma":[0.9459099,0.011077748,0.03145011,0.00864994,0.0011734023,0.00008634416,0.00020770727,0.00010050046,0.0013443069],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9930138,0.00307148,0.0011495516,0.0003977763,0.0018370255,0.0005302893],"domain_scores_gemma":[0.9844781,0.0102839535,0.0014002124,0.00072881044,0.002266073,0.00084278476],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.011743433,0.0010996489,0.0011437497,0.0038742386,0.00081206165,0.0020658516,0.0020842399,0.002401059,0.0007491148],"category_scores_gemma":[0.024292631,0.0007694367,0.0006093738,0.0010908201,0.0028372423,0.0018678486,0.001060848,0.0030989512,0.0012849083],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017011563,0.00040605137,0.6064929,0.002011169,0.00015734465,0.08345221,0.0046107033,0.0017535832,0.042066116,0.0036298148,0.016798317,0.23692065],"study_design_scores_gemma":[0.00017740377,0.0020376262,0.34025115,0.005607575,0.0004750755,0.47717953,0.013498665,0.025534421,0.049431827,0.0115255555,0.07404256,0.00023859905],"about_ca_topic_score_codex":0.0042489083,"about_ca_topic_score_gemma":0.0034117007,"teacher_disagreement_score":0.011743433,"about_ca_system_score_codex":0.0006597897,"about_ca_system_score_gemma":0.0006856916,"threshold_uncertainty_score":0.062105894},"labels":[],"label_agreement":null},{"id":"W1521075280","doi":"10.1002/9780470057414.ch9","title":"Microarrays for Studying Pathogenicity in <i>Candida Albicans</i>","year":2006,"lang":"en","type":"other","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Candida albicans; DNA microarray; Microarray; Pathogenicity; Corpus albicans; Computational biology; Biology; Oligonucleotide; Microarray analysis techniques; Microbiology; DNA; Genetics; Gene; Gene expression","score_opus":0.014239482566535648,"score_gpt":0.29777051920859277,"score_spread":0.28353103664205714,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1521075280","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.01672005,0.1968154,0.29982135,0.011594315,0.01141023,0.0020042341,0.025728779,0.010886705,0.42501894],"genre_scores_gemma":[0.023127181,0.18135343,0.37794095,0.005843122,0.0033478055,0.002176072,0.032875344,0.0014360651,0.37190002],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99962616,0.000051959913,0.00002249835,0.000048442307,0.00022277173,0.000028221812],"domain_scores_gemma":[0.9998331,0.00005143681,0.000015112431,0.000020420286,0.00006159839,0.000018231367],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042903237,0.000756842,0.00050241884,0.0015917062,0.00039116596,0.0007427414,0.00078764453,0.0007100916,0.035865624],"category_scores_gemma":[0.00044820408,0.0005354331,0.000500385,0.0015097226,0.00019359656,0.0007349104,0.0004703198,0.0014511801,0.021120602],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001293717,0.00010902661,0.00023788995,0.0020902227,0.000021500577,0.00014541367,0.000087512904,0.0004519333,0.51379853,0.00927361,0.20229916,0.27135584],"study_design_scores_gemma":[0.000020159674,0.00016961915,0.0020432998,0.0002695925,0.000023670118,0.0006601998,0.000042786025,0.0005627333,0.14407691,0.0028430878,0.84925455,0.00003327752],"about_ca_topic_score_codex":0.00083132304,"about_ca_topic_score_gemma":0.0026337274,"teacher_disagreement_score":0.035865624,"about_ca_system_score_codex":0.000518777,"about_ca_system_score_gemma":0.00043788215,"threshold_uncertainty_score":0.11998248},"labels":[],"label_agreement":null},{"id":"W1933326655","doi":"10.3109/13693786.2011.584218","title":"Invasive Myceliophthora thermophila infection mimicking invasive aspergillosis in a neutropenic patient: a new cause of cross-reactivity with the Aspergillus galactomannan serum antigen assay","year":2011,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Galactomannan; Aspergillosis; Voriconazole; Biology; Aspergillus; Cross-reactivity; Microbiology; Neutropenia; Malignancy; Immunology; Antigen; Cross reactions; Chemotherapy","score_opus":0.03707104337940514,"score_gpt":0.2938890728167935,"score_spread":0.25681802943738835,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1933326655","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926596,0.0009875478,0.0014169943,0.00044147804,0.000052925832,0.00006911571,0.00005248337,0.000060723698,0.0042591537],"genre_scores_gemma":[0.99897987,0.00026446217,0.00037459363,0.00012292019,0.00007594424,0.0000047310727,0.000021864495,0.0000050157105,0.0001504693],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99957615,0.00007810852,0.000051429626,0.000083133404,0.00007311722,0.00013799213],"domain_scores_gemma":[0.9989452,0.00043564165,0.00023108494,0.00009598701,0.000052938034,0.00023906447],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003189742,0.0010759106,0.00064404,0.00095689914,0.0007832242,0.0009713771,0.00044127964,0.0019235783,0.0014806448],"category_scores_gemma":[0.0023409799,0.00067944295,0.00045899843,0.00045475806,0.00071226235,0.0007833697,0.00062649447,0.0014128798,0.000528689],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013984984,0.000094407376,0.03855951,0.000040606195,0.000014096571,0.9512534,0.00029012043,0.00008690657,0.0068241274,0.00013590178,0.00022722654,0.0023339025],"study_design_scores_gemma":[0.00002133052,0.00019367752,0.020437539,0.000016304546,0.000033366334,0.97532654,0.00014324274,0.00056897796,0.002607065,0.00009501959,0.0005453158,0.000011669015],"about_ca_topic_score_codex":0.00066278334,"about_ca_topic_score_gemma":0.00055473973,"teacher_disagreement_score":0.0019235783,"about_ca_system_score_codex":0.00030859155,"about_ca_system_score_gemma":0.00025112764,"threshold_uncertainty_score":0.0049532056},"labels":[],"label_agreement":null},{"id":"W1967584821","doi":"10.1080/13693780500036019","title":"Sub-clinical infection and asymptomatic carriage of<i>Cryptococcus gattii</i>in dogs and cats during an outbreak of cryptococcosis","year":2005,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of British Columbia; Vancouver Coastal Health; University of Saskatchewan","funders":"","keywords":"Cryptococcus gattii; CATS; Cryptococcosis; Outbreak; Carriage; Asymptomatic; Cryptococcus; Medicine; Serotype; Veterinary medicine; Biology; Virology; Pathology; Microbiology; Internal medicine","score_opus":0.017756499136193194,"score_gpt":0.33629824584081486,"score_spread":0.31854174670462165,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1967584821","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9998041,0.000040123396,0.000010640435,0.000010321121,7.4508995e-7,0.0000030882268,0.000013880048,8.362106e-7,0.00011638214],"genre_scores_gemma":[0.9998227,0.00003965676,0.000029161609,0.000014099118,0.0000013824892,0.0000013853823,0.000046469508,3.1407237e-7,0.000044860135],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996307,0.00005472526,0.00003132443,0.000061068844,0.00010052384,0.000121638026],"domain_scores_gemma":[0.99938846,0.000087876,0.00017481112,0.000022489912,0.0000849077,0.00024147828],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027265196,0.00020095875,0.00021741648,0.0005523362,0.0006801008,0.0006284656,0.00017263228,0.00040489313,0.00044294054],"category_scores_gemma":[0.0011454145,0.00026255753,0.00008277659,0.00030117575,0.0007752447,0.00025800345,0.0003310914,0.00034414936,0.000105085295],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022651981,0.00007074176,0.9917537,0.000016647826,0.000009925571,0.0018483197,0.0004487039,0.000038200076,0.0040065325,0.000019011346,0.00010477062,0.0014569652],"study_design_scores_gemma":[0.000007045467,0.00018210885,0.99462694,0.000007207155,0.0000065737704,0.0037567997,0.0006780657,0.00013810236,0.00042509302,0.0000133527965,0.00015538243,0.00000333712],"about_ca_topic_score_codex":0.04119467,"about_ca_topic_score_gemma":0.07834065,"teacher_disagreement_score":0.04119467,"about_ca_system_score_codex":0.0011944763,"about_ca_system_score_gemma":0.0005740498,"threshold_uncertainty_score":0.081909776},"labels":[],"label_agreement":null},{"id":"W1969590117","doi":"10.3109/13693780903225805","title":"<i>Phialosimplex</i>, a new anamorphic genus associated with infections in dogs and having phylogenetic affinity to the Trichocomaceae","year":2010,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Infectious Diseases and Mycology","field":"Veterinary","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; University of British Columbia; RMIT University; University of Northern British Columbia; University of Nebraska Medical Center","keywords":"Biology; Paecilomyces; Phylogenetic tree; Internal transcribed spacer; Conidium; Genus; Microbiology; Phylogenetics; Aspergillus; Penicillium; Botany; Zoology; Genetics; Gene","score_opus":0.0202439806573667,"score_gpt":0.2987976330768954,"score_spread":0.2785536524195287,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969590117","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99569017,0.0009257457,0.0006356935,0.000052654344,0.000026921996,0.000036258134,0.0001916912,0.00003426038,0.0024065753],"genre_scores_gemma":[0.9965977,0.00056165614,0.0015428173,0.00005194289,0.000035152083,0.000013854284,0.0004888342,0.0000050141202,0.00070294645],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99989116,0.000013222591,0.000013848677,0.000025069157,0.000029851499,0.000026899537],"domain_scores_gemma":[0.9997601,0.000022651564,0.000118654585,0.000016891281,0.000029547577,0.000052163647],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000907156,0.00037392054,0.0001478014,0.000674489,0.0004244126,0.0006106796,0.00020555886,0.00024601017,0.00069694064],"category_scores_gemma":[0.00021563606,0.00011864058,0.00014721754,0.00043351,0.00042723806,0.00036120007,0.00048148862,0.00022361455,0.00036187336],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007292197,0.000089838904,0.26398095,0.00051408785,0.00006539529,0.011283512,0.0015682683,0.0002879964,0.6624566,0.00052874297,0.00088878156,0.05760664],"study_design_scores_gemma":[0.000024650697,0.00083425484,0.88053983,0.00012211996,0.00008546007,0.043532774,0.002196614,0.00083704444,0.042064566,0.0004323789,0.029295024,0.000035294634],"about_ca_topic_score_codex":0.0009081167,"about_ca_topic_score_gemma":0.0012683892,"teacher_disagreement_score":0.0009081167,"about_ca_system_score_codex":0.00017081236,"about_ca_system_score_gemma":0.0002551801,"threshold_uncertainty_score":0.0023314357},"labels":[],"label_agreement":null},{"id":"W1980642853","doi":"10.1080/13693780600917217","title":"Asthma and mould allergy – Does it matter?","year":2006,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Asthma and respiratory diseases","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Asthma; Allergy; Respiratory allergy; Medicine; Environmental health; Respiratory system; Intensive care medicine; Immunology; Internal medicine; Allergen","score_opus":0.004987321339341672,"score_gpt":0.2553031847514591,"score_spread":0.2503158634121174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1980642853","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0015110367,0.60805106,0.000057783072,0.3727669,0.013609101,0.000008780965,0.000121452846,0.000020045502,0.0038538768],"genre_scores_gemma":[0.026904983,0.73149234,0.00018957186,0.19350553,0.04291638,0.000030153456,0.00019502552,0.000036357793,0.00472963],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9956852,0.0015971371,0.0004019317,0.0005652161,0.0012916599,0.00045890332],"domain_scores_gemma":[0.9830913,0.007799366,0.0019983929,0.00042996818,0.0037410473,0.0029399348],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0058773924,0.000463058,0.0025919974,0.001450572,0.0018198417,0.005531014,0.0014387647,0.007860554,0.026388798],"category_scores_gemma":[0.021306032,0.00041139373,0.0007294397,0.0018802527,0.0056244433,0.009285464,0.0021256427,0.008670873,0.0059832362],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003908608,0.00013477022,0.009056968,0.005172162,0.00017936618,0.00048338383,0.0014805023,0.000056956455,0.00011415995,0.010125236,0.58908045,0.38372517],"study_design_scores_gemma":[0.00014295253,0.00037817127,0.0342679,0.028087525,0.00026216626,0.0018967334,0.006482916,0.00010991912,0.00005409539,0.037366934,0.89083517,0.00011559792],"about_ca_topic_score_codex":0.014257653,"about_ca_topic_score_gemma":0.02442864,"teacher_disagreement_score":0.026388798,"about_ca_system_score_codex":0.0032656312,"about_ca_system_score_gemma":0.004243102,"threshold_uncertainty_score":0.08827931},"labels":[],"label_agreement":null},{"id":"W1988429363","doi":"10.1080/13693780600803870","title":"Cerebral blastomycosis: a case series incorporating voriconazole in the treatment regimen","year":2006,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McMaster University; Trillium Health Centre; University Health Network; William Osler Health System","funders":"","keywords":"Blastomycosis; Voriconazole; Itraconazole; Medicine; Blastomyces dermatitidis; Concomitant; Regimen; Dermatology; Surgery; Antifungal","score_opus":0.012726951827770882,"score_gpt":0.2787486560889408,"score_spread":0.2660217042611699,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988429363","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9824979,0.004012434,0.0019219667,0.00065280584,0.0001910328,0.00018093591,0.00009035988,0.000121101475,0.010331495],"genre_scores_gemma":[0.99574983,0.0018349972,0.00071721873,0.00031039392,0.00030982253,0.000036671918,0.00007776754,0.000024636332,0.0009387317],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9994168,0.00011187984,0.00006954811,0.00007827778,0.00013725489,0.00018617205],"domain_scores_gemma":[0.9988257,0.000372893,0.00027563339,0.00015764314,0.00007861914,0.0002895453],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003130468,0.0011335431,0.00079442596,0.0008071801,0.0017847363,0.001064563,0.00066126406,0.0017565289,0.0019847532],"category_scores_gemma":[0.003668664,0.0005224708,0.00066559354,0.00081412186,0.00095312844,0.0006713933,0.0005837871,0.0015632816,0.0009715817],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014955507,0.00027603412,0.025123952,0.000060675924,0.00004166673,0.96175414,0.00055629277,0.00019887036,0.0017432994,0.00012213885,0.0007004193,0.009272883],"study_design_scores_gemma":[0.000044309112,0.00020451781,0.006225538,0.000016551629,0.000035556444,0.9905157,0.00015474502,0.00025024707,0.0011781298,0.000041983643,0.0013200132,0.0000127440835],"about_ca_topic_score_codex":0.002895989,"about_ca_topic_score_gemma":0.005288207,"teacher_disagreement_score":0.002895989,"about_ca_system_score_codex":0.0006169004,"about_ca_system_score_gemma":0.0009501613,"threshold_uncertainty_score":0.0066396594},"labels":[],"label_agreement":null},{"id":"W1990365009","doi":"10.1080/13693780701449425","title":"DNA and the classical way: Identification of medically important molds in the 21st century","year":2007,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":138,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Identification (biology); Polymerase chain reaction; Computational biology; DNA sequencing; Ancient DNA; Biology; DNA microarray; RAPD; DNA; Computer science; Genetics; Medicine; Gene; Ecology; Population","score_opus":0.016149857015931676,"score_gpt":0.29919130928189214,"score_spread":0.28304145226596045,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990365009","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008893842,0.72079515,0.03215351,0.17042607,0.029782183,0.00006714801,0.00029972554,0.00022912651,0.03735327],"genre_scores_gemma":[0.0802882,0.6423211,0.108076334,0.1074972,0.02227485,0.00019630406,0.0006043702,0.00023918095,0.038502395],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9950566,0.0017887536,0.00035941476,0.0006951886,0.0019290987,0.0001709337],"domain_scores_gemma":[0.99374515,0.0023888396,0.0010045819,0.00047834642,0.0017089533,0.0006741779],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005340887,0.00070915895,0.0008230606,0.004300284,0.0014468203,0.0046440144,0.0012627665,0.0037458672,0.0041218363],"category_scores_gemma":[0.010405574,0.00031636874,0.00037084112,0.0033931339,0.0133310985,0.010688714,0.003485837,0.004089812,0.00223025],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027377481,0.00011661435,0.007266879,0.0034947044,0.000088999994,0.0011492687,0.0063732793,0.00028068313,0.014188536,0.16406877,0.11619224,0.6865062],"study_design_scores_gemma":[0.000011787758,0.0001181269,0.0024927664,0.0018900873,0.000015956322,0.0018716987,0.0025793859,0.00012623904,0.002037731,0.06173984,0.9270483,0.000068132875],"about_ca_topic_score_codex":0.00129302,"about_ca_topic_score_gemma":0.0018145164,"teacher_disagreement_score":0.005340887,"about_ca_system_score_codex":0.0022383544,"about_ca_system_score_gemma":0.0021705115,"threshold_uncertainty_score":0.028245687},"labels":[],"label_agreement":null},{"id":"W1990669830","doi":"10.3109/13693786.2012.656717","title":"Invasive<i>Mycoleptodiscus</i>fungal cellulitis and myositis","year":2012,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Cellulitis; Myositis; Biology; Pathology; Medicine; Immunology","score_opus":0.010788682052129971,"score_gpt":0.27648494854405237,"score_spread":0.2656962664919224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990669830","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99221146,0.0012120396,0.0008571054,0.00041794614,0.000032655935,0.00002915324,0.00006864253,0.00004470089,0.005126305],"genre_scores_gemma":[0.9989913,0.00022769753,0.00026252074,0.00014095962,0.000048404574,0.0000027679341,0.000028911989,0.000003888269,0.0002935389],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9998336,0.000014141839,0.000014460203,0.000046952147,0.000022986607,0.000067829635],"domain_scores_gemma":[0.9995759,0.00008822537,0.00011428606,0.000027992852,0.00003434063,0.00015929],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015913435,0.00061914104,0.00038066015,0.00054259645,0.0009229704,0.00057922874,0.00022854503,0.00087394495,0.0012463975],"category_scores_gemma":[0.00073899556,0.00025814766,0.00029220185,0.00038440805,0.0005376247,0.00044049582,0.000385636,0.000731699,0.00041649648],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021931514,0.00011605505,0.10950709,0.000117512696,0.000023611385,0.8661118,0.00080471137,0.0001348386,0.012042627,0.00030017234,0.00057277124,0.010049582],"study_design_scores_gemma":[0.000021476626,0.00022239378,0.062415928,0.000024809406,0.00002837019,0.933002,0.00024038751,0.0003189024,0.0023871923,0.00015321607,0.0011747264,0.0000106739635],"about_ca_topic_score_codex":0.0014995185,"about_ca_topic_score_gemma":0.0018463361,"teacher_disagreement_score":0.0014995185,"about_ca_system_score_codex":0.00036656926,"about_ca_system_score_gemma":0.0002362216,"threshold_uncertainty_score":0.0041695833},"labels":[],"label_agreement":null},{"id":"W1999886838","doi":"10.1080/13693780701386007","title":"<i>Lecythophora mutabilis</i>prosthetic valve endocarditis in a diabetic patient","year":2007,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of California, San Francisco; Astellas Pharma; University of Alberta","keywords":"Voriconazole; Endocarditis; Amphotericin B; Medicine; Microbiology; Internal medicine; Biology; Antifungal; Dermatology","score_opus":0.00652003328512039,"score_gpt":0.2765844858432612,"score_spread":0.27006445255814077,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999886838","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99515533,0.00042899064,0.00023018167,0.00073118386,0.000042638574,0.000020161964,0.0000694258,0.000028565342,0.0032935657],"genre_scores_gemma":[0.9988926,0.00018277165,0.00015771038,0.00029275284,0.00006907772,0.0000034834025,0.00002995794,0.0000039115416,0.00036770178],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99974877,0.00002928363,0.00003181213,0.000057092522,0.00003008929,0.00010301431],"domain_scores_gemma":[0.99942195,0.00012837359,0.00010746605,0.000022507294,0.00002976391,0.00028993978],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000223747,0.0007470104,0.0005292696,0.001130766,0.002321832,0.0008859286,0.00036728499,0.0014548919,0.00159812],"category_scores_gemma":[0.0015040225,0.0004980858,0.00041686272,0.000774255,0.0007537456,0.00088240206,0.000532065,0.0013808748,0.00031966192],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002537541,0.00031071063,0.16555625,0.000036902606,0.000030462379,0.82464594,0.00083066063,0.00014144622,0.0030713368,0.00025647556,0.0006732479,0.0041927067],"study_design_scores_gemma":[0.00003891274,0.000501613,0.09077419,0.000029054854,0.00004241841,0.90521973,0.00095467095,0.000513717,0.00089677103,0.00016751915,0.0008284902,0.000032909993],"about_ca_topic_score_codex":0.0034429512,"about_ca_topic_score_gemma":0.003409804,"teacher_disagreement_score":0.0034429512,"about_ca_system_score_codex":0.00057140255,"about_ca_system_score_gemma":0.00042561532,"threshold_uncertainty_score":0.006845832},"labels":[],"label_agreement":null},{"id":"W2006977936","doi":"10.1080/mmy.39.3.243.251","title":"Quantitative culture of<i>Malassezia</i>species from different body sites of individuals with or without dermatoses","year":2001,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":218,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women's College Hospital; University of Toronto","funders":"","keywords":"Malassezia; Pityriasis; Seborrheic dermatitis; Seborrhoeic dermatitis; Dermatology; Forehead; Scalp; Psoriasis; Medicine; Trunk; Biology; Surgery; Botany","score_opus":0.026664932607547015,"score_gpt":0.3235092789727925,"score_spread":0.2968443463652455,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2006977936","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963905,0.00045444386,0.0017476176,0.000017216975,0.000010032052,0.000044066754,0.0006040454,0.000019097664,0.00071285927],"genre_scores_gemma":[0.99377406,0.00041335713,0.003186371,0.000041629428,0.000016836644,0.00006847573,0.0013520899,0.000012197351,0.0011348858],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997551,0.00003746872,0.000027175001,0.00007665847,0.00006594252,0.00003767755],"domain_scores_gemma":[0.99978536,0.00005527945,0.000036049805,0.000020645115,0.000067922236,0.00003481308],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001769227,0.00035630338,0.0003046772,0.0005090286,0.00022195622,0.00026467227,0.00012749546,0.00022912888,0.0015890064],"category_scores_gemma":[0.00031721077,0.000113254464,0.00019619237,0.00042264405,0.00016539032,0.00014898957,0.00025073002,0.00021732136,0.00030265524],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035944843,0.00007692045,0.028057225,0.00010153761,0.000023931005,0.00017491517,0.00026572414,0.00005858444,0.96636605,0.000028031916,0.00007511265,0.004412585],"study_design_scores_gemma":[0.00003760635,0.0030816302,0.5971613,0.000048555667,0.00011431926,0.0038299789,0.0013802738,0.0012366872,0.38965815,0.00010879267,0.0033061192,0.00003659306],"about_ca_topic_score_codex":0.00040008212,"about_ca_topic_score_gemma":0.00046410484,"teacher_disagreement_score":0.0015890064,"about_ca_system_score_codex":0.00007634525,"about_ca_system_score_gemma":0.00005894292,"threshold_uncertainty_score":0.005315721},"labels":[],"label_agreement":null},{"id":"W2010503216","doi":"10.1080/mmy.40.2.209.212","title":"Onychomycosis due to<i>Onychocola canadensis</i>: report of the first two Spanish cases","year":2002,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Dermatology; Geography; Medicine","score_opus":0.019365687180475075,"score_gpt":0.28616965383509424,"score_spread":0.26680396665461914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2010503216","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9687196,0.0038619454,0.0013399587,0.0009148018,0.0002687169,0.00013013411,0.0002033803,0.00011266668,0.024448695],"genre_scores_gemma":[0.9946253,0.0016696715,0.0004094298,0.0006808707,0.00027964148,0.00002756569,0.0002028714,0.00003455073,0.002070181],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9995152,0.00005061838,0.00005974424,0.00008380317,0.00006938481,0.00022135908],"domain_scores_gemma":[0.998955,0.00018056987,0.00029067125,0.00015137013,0.00018693107,0.00023537053],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004953572,0.0016225267,0.0008874362,0.00090967765,0.001178946,0.001370965,0.0009638384,0.0024674349,0.0018782744],"category_scores_gemma":[0.0018917441,0.0006574638,0.00074825436,0.0007403642,0.0011671787,0.00053208775,0.0011396789,0.0012065759,0.0011620977],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016830742,0.000261262,0.05466932,0.0001934024,0.000067696026,0.92693263,0.00066696503,0.0002016348,0.005071318,0.00024595074,0.0019166175,0.009604865],"study_design_scores_gemma":[0.00010035349,0.00014744171,0.02312283,0.000043371438,0.000049476643,0.96862644,0.0005672972,0.00016547828,0.0016475623,0.00008922076,0.0054195025,0.000021080119],"about_ca_topic_score_codex":0.009522873,"about_ca_topic_score_gemma":0.00555995,"teacher_disagreement_score":0.009522873,"about_ca_system_score_codex":0.0009084655,"about_ca_system_score_gemma":0.0008121503,"threshold_uncertainty_score":0.018934906},"labels":[],"label_agreement":null},{"id":"W2012531879","doi":"10.3109/13693786.2011.633233","title":"Genetic and phenotypic evaluation of<i>Candida albicans</i>strains isolated from subgingival biofilm of diabetic patients with chronic periodontitis","year":2012,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Candida albicans; Microbiology; Biology; Corpus albicans; Virulence; Genotype; Periodontitis; Chronic periodontitis; Biofilm; Polymerase chain reaction; Gene; Genetics; Bacteria; Medicine; Internal medicine","score_opus":0.010620935286951808,"score_gpt":0.2576829007383082,"score_spread":0.2470619654513564,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012531879","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99963045,0.00011511633,0.000041976553,0.000009059869,0.000002485282,0.0000056514373,0.00006965233,0.0000010020116,0.00012454974],"genre_scores_gemma":[0.99891067,0.00022394334,0.00040837404,0.00002379105,0.0000068500713,0.000009163402,0.00023676804,0.0000020806456,0.00017822575],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997558,0.000026071206,0.000039315095,0.000055123306,0.0000730043,0.000050660994],"domain_scores_gemma":[0.9997099,0.00004098483,0.00009479153,0.000012819197,0.000059457332,0.0000821063],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017639698,0.0003047315,0.00026044605,0.00067194545,0.0003340078,0.0004093352,0.00011150901,0.0002663458,0.00060985226],"category_scores_gemma":[0.0006123048,0.00014437987,0.00022838297,0.00054814765,0.00020639866,0.00014208,0.00026952,0.00028953687,0.0001234951],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014696697,0.00028860293,0.69152737,0.000111735855,0.0000620676,0.0019975808,0.0010267299,0.00006564905,0.2928515,0.000040677765,0.00013736644,0.010421068],"study_design_scores_gemma":[0.00001991886,0.00079932495,0.9800408,0.000013620777,0.00006573986,0.0030954513,0.0010482887,0.00013536843,0.014307783,0.000017934852,0.0004453929,0.000010436113],"about_ca_topic_score_codex":0.0018857006,"about_ca_topic_score_gemma":0.0015074788,"teacher_disagreement_score":0.0018857006,"about_ca_system_score_codex":0.00014134691,"about_ca_system_score_gemma":0.00015417994,"threshold_uncertainty_score":0.0037494898},"labels":[],"label_agreement":null},{"id":"W2014413639","doi":"10.1080/13693780400029247","title":"Intracellular and extracellular growth of<i>Aspergillus fumigatus</i>","year":2005,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"University of British Columbia; Simon Fraser University","keywords":"Aspergillus fumigatus; Extracellular; Microbiology; Biology; A549 cell; Siderophore; Intracellular; Cell culture; Conidium; Cell biology; Biochemistry; Gene","score_opus":0.028555963191806644,"score_gpt":0.33422961108127597,"score_spread":0.3056736478894693,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2014413639","genre_codex":"empirical","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99565864,0.0009080322,0.00095024885,0.00004866735,0.0000133532685,0.000010758466,0.0003943738,0.000031714357,0.0019842158],"genre_scores_gemma":[0.99680686,0.0002598869,0.0011599767,0.000024850417,0.0000052535406,0.000011056843,0.0005542237,0.000007880123,0.0011699367],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99981874,0.000030180692,0.000014784894,0.000035866688,0.00005030031,0.000050184837],"domain_scores_gemma":[0.99992025,0.00001892432,0.000017131579,0.000013370045,0.000014768667,0.000015517484],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009768019,0.00024662993,0.00019433949,0.00010065332,0.00012037258,0.00026371083,0.000099029414,0.00020993412,0.00071546016],"category_scores_gemma":[0.00010603552,0.00005995107,0.00018595446,0.00007473169,0.00009975656,0.00013107866,0.00017626028,0.0002466565,0.00034606582],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000554183,0.000023836044,0.0009206759,0.000020881176,0.000002521008,0.0000679509,0.000012975225,0.0000252131,0.99783784,0.000031168896,0.00003336621,0.00096808554],"study_design_scores_gemma":[0.000005711171,0.0004281135,0.023132924,0.0000088744655,0.000012357089,0.00044902292,0.00007686618,0.00052658404,0.9737094,0.000022002374,0.0016238185,0.0000044030107],"about_ca_topic_score_codex":0.002328015,"about_ca_topic_score_gemma":0.0022966103,"teacher_disagreement_score":0.002328015,"about_ca_system_score_codex":0.00016644728,"about_ca_system_score_gemma":0.000096755095,"threshold_uncertainty_score":0.0046289563},"labels":[],"label_agreement":null},{"id":"W2015315048","doi":"10.1080/13693780600900098","title":"Disseminated phaeohyphomycosis due to<i>Ochroconis gallopavum</i>in the setting of advanced HIV infection","year":2006,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; Mount Sinai Hospital; Public Health Ontario; University of Toronto","funders":"","keywords":"Phaeohyphomycosis; Medicine; Human immunodeficiency virus (HIV); Opportunistic infection; Dermatology; Immunology; Intensive care medicine; Viral disease","score_opus":0.01855441263328753,"score_gpt":0.3603376688688746,"score_spread":0.34178325623558703,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2015315048","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0017531503,0.9953111,0.00014028585,0.00018423599,0.00012308477,0.0000057454804,0.000011518747,0.000008381785,0.0024626066],"genre_scores_gemma":[0.010045651,0.98860246,0.00025862342,0.00015383666,0.00019955542,0.000004087062,0.000020163801,0.0000013041973,0.00071439863],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998634,0.00002911997,0.000026485704,0.000021041682,0.000044409044,0.000015468935],"domain_scores_gemma":[0.9997383,0.00012354573,0.000060169372,0.0000082604965,0.000046391157,0.000023336148],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029252714,0.000492462,0.0008358155,0.0017018951,0.00024287391,0.00066258694,0.0004555675,0.00079276686,0.0020427608],"category_scores_gemma":[0.000531708,0.00017184332,0.00022946775,0.0017073391,0.0003645673,0.0008062503,0.00024735666,0.00048006972,0.0015343919],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000106413754,0.000106095875,0.0036681527,0.018778494,0.00009441106,0.022583444,0.00022008685,0.00020218409,0.004816611,0.0008279214,0.01688073,0.93171555],"study_design_scores_gemma":[0.000044206103,0.00033399224,0.02037497,0.009263289,0.00031615462,0.25028604,0.000785905,0.00017519036,0.0029131365,0.0010834878,0.7143829,0.00004078411],"about_ca_topic_score_codex":0.001152538,"about_ca_topic_score_gemma":0.002071971,"teacher_disagreement_score":0.0020427608,"about_ca_system_score_codex":0.00020484238,"about_ca_system_score_gemma":0.0006044092,"threshold_uncertainty_score":0.006833732},"labels":[],"label_agreement":null},{"id":"W2016545820","doi":"10.3109/13693786.2010.547880","title":"Prevalent nosocomial clusters among causative agents for candidemia in Hamilton, Canada","year":2011,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Hamilton Regional Laboratory Medicine Program; McMaster University","funders":"","keywords":"Candida parapsilosis; Incidence (geometry); Candida tropicalis; Genotype; Intensive care unit; Medical microbiology; Intensive care; Corpus albicans; Biology; Candida glabrata; Candida albicans; Microbiology; Molecular epidemiology; Medicine; Internal medicine; Intensive care medicine; Genetics; Gene","score_opus":0.03781388086777324,"score_gpt":0.3006554455581472,"score_spread":0.26284156469037395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2016545820","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99476755,0.0008972223,0.00018934053,0.00031155115,0.000014273451,0.000081844504,0.0013430833,0.000016014803,0.002379191],"genre_scores_gemma":[0.9984034,0.0003858131,0.000189762,0.000091649206,0.000004436329,0.000009374332,0.0002950994,0.000003998197,0.00061646843],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992219,0.000045463607,0.000041807252,0.000110502864,0.00034406228,0.00023629943],"domain_scores_gemma":[0.99861395,0.00005720213,0.00033354873,0.000028447952,0.00057805196,0.0003886945],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019153593,0.00030415333,0.00030502566,0.0013048204,0.0023845783,0.0008893759,0.0008485585,0.0002702276,0.001715756],"category_scores_gemma":[0.0010268546,0.00029553304,0.00022691849,0.002492526,0.00063796993,0.00024494197,0.0008071709,0.00039867114,0.00009742446],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056782763,0.000022284894,0.9890643,0.000036632908,0.000034191897,0.00037363195,0.0009810718,0.000068281974,0.0009624858,0.00010039806,0.0010143665,0.0072856513],"study_design_scores_gemma":[0.000005840825,0.00001788607,0.9971885,0.000023867922,0.00001765663,0.00020687854,0.001210702,0.0001834766,0.00017651808,0.000021286874,0.00093662215,0.000010697182],"about_ca_topic_score_codex":0.9895985,"about_ca_topic_score_gemma":0.99589044,"teacher_disagreement_score":0.018006215,"about_ca_system_score_codex":0.018006215,"about_ca_system_score_gemma":0.02212235,"threshold_uncertainty_score":0.13064486},"labels":[],"label_agreement":null},{"id":"W2017582953","doi":"10.3109/13693786.2011.635387","title":"Comment on the paper by Kpodzo<i>et al.</i>","year":2012,"lang":"en","type":"letter","venue":"Medical Mycology","topic":"Advanced Causal Inference Techniques","field":"Mathematics","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"MEDLINE; Political science; Law","score_opus":0.10164081757898306,"score_gpt":0.3981729930860049,"score_spread":0.2965321755070218,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2017582953","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000091126945,0.00041756182,0.000057204168,0.9846073,0.01398175,0.000006986282,0.000061377024,0.000027085734,0.0007496259],"genre_scores_gemma":[0.00081676454,0.00030518297,0.00008745607,0.9776028,0.019650204,0.000020199845,0.00002081337,0.000017349867,0.0014792178],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99582326,0.0009690276,0.00058380316,0.0007049987,0.0013128729,0.0006061164],"domain_scores_gemma":[0.98600847,0.007693352,0.0011430422,0.0004935995,0.003033164,0.0016283836],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005909464,0.001285322,0.0021866716,0.0014223834,0.0045297127,0.0054910867,0.0044768983,0.07758878,0.008583854],"category_scores_gemma":[0.047615543,0.0011419817,0.0020049298,0.0016565039,0.0051737083,0.0057626907,0.00218214,0.06251986,0.0118820695],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026712622,0.0000072055223,0.00016512374,0.000027452546,0.0000067145565,0.00044189807,0.000054569624,0.000018521725,0.0000313145,0.0009832421,0.99687994,0.0013574208],"study_design_scores_gemma":[0.00018551463,0.00006786869,0.0013518472,0.00045947792,0.000064620705,0.0032300127,0.00066974503,0.00055521197,0.0004414529,0.016144713,0.97670084,0.00012862986],"about_ca_topic_score_codex":0.010977066,"about_ca_topic_score_gemma":0.013024946,"teacher_disagreement_score":0.07758878,"about_ca_system_score_codex":0.0059066936,"about_ca_system_score_gemma":0.004952775,"threshold_uncertainty_score":0.042856216},"labels":[],"label_agreement":null},{"id":"W2020910947","doi":"10.3109/13693786.2010.516457","title":"Seasonal variations in the prevalence of<i>Cryptococcus neoformans</i>var.<i>grubii</i>and<i>Cryptococcus gattii</i>in decayed wood inside trunk hollows of diverse tree species in north-western India: a retrospective study","year":2010,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Cryptococcus neoformans; Cryptococcus gattii; Biology; Cryptococcosis; Bark (sound); Cryptococcus; Population; Botany; Veterinary medicine; Ecology; Microbiology","score_opus":0.013891871182224142,"score_gpt":0.2754678395854389,"score_spread":0.2615759684032148,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020910947","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9996178,0.00006604574,0.000035087272,0.0000044501166,0.0000010082179,0.000004434192,0.00012813866,0.0000019895945,0.00014114275],"genre_scores_gemma":[0.99955755,0.00010946324,0.00006466219,0.00001190597,0.0000019701483,0.000004024572,0.00017110484,0.0000012739682,0.00007789491],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997607,0.000040045543,0.00003153633,0.00007140879,0.00003858804,0.000057646997],"domain_scores_gemma":[0.9994331,0.00007854018,0.00025310754,0.00004544946,0.00008122628,0.0001085317],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001785765,0.00018711554,0.0002173141,0.0008507777,0.00033585244,0.00045665726,0.0002456382,0.0002633917,0.00044978704],"category_scores_gemma":[0.00043277748,0.00030593522,0.00022727012,0.0008242445,0.0003594312,0.0003943624,0.0003112226,0.00025850354,0.00014764011],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017156313,0.000010872018,0.9985689,0.0000071579907,0.00000890405,0.00012384227,0.00020273798,0.000008668093,0.0004853007,0.0000026149416,0.000017316697,0.0005465936],"study_design_scores_gemma":[3.575211e-7,0.00004883096,0.99873334,0.000003004235,0.000008293013,0.00047268302,0.00052373187,0.000020024174,0.00010814751,0.0000021505177,0.00007732913,0.0000020844645],"about_ca_topic_score_codex":0.0091662565,"about_ca_topic_score_gemma":0.0181314,"teacher_disagreement_score":0.0091662565,"about_ca_system_score_codex":0.00025855505,"about_ca_system_score_gemma":0.00019027594,"threshold_uncertainty_score":0.018225849},"labels":[],"label_agreement":null},{"id":"W2050257859","doi":"10.1080/1369378031000160444","title":"First Italian report of onychomycosis caused by<i>Onychocola canadensis</i>","year":2003,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Temperate climate; Fungus; Geography; Biology; Ecology; Botany","score_opus":0.010369650890801652,"score_gpt":0.27676216096896045,"score_spread":0.2663925100781588,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2050257859","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.87341654,0.00560317,0.0015718188,0.005701825,0.00079518143,0.00012701748,0.0004679015,0.00030150413,0.11201506],"genre_scores_gemma":[0.9873403,0.001994791,0.00051597075,0.0021289755,0.001185792,0.000020934016,0.00029168927,0.00004789395,0.0064736586],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9997547,0.000039888197,0.000018575314,0.000042991032,0.000039661667,0.00010410168],"domain_scores_gemma":[0.9992679,0.00013471312,0.00023044905,0.00010929176,0.00008765314,0.00016998246],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022190165,0.001005549,0.0004761329,0.00070824276,0.0010334679,0.00078519026,0.00046274162,0.0014543869,0.0043774005],"category_scores_gemma":[0.0011875599,0.00043224503,0.00067664037,0.0005942981,0.00087174395,0.0005544004,0.00074261543,0.001048658,0.0012534555],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00050051976,0.00032370488,0.12478925,0.00027879755,0.00011768241,0.81462306,0.0017048868,0.0001615686,0.0053620767,0.0010530031,0.02887661,0.022208786],"study_design_scores_gemma":[0.00005783823,0.00042493152,0.076616056,0.00008275279,0.00007750579,0.88816035,0.0003996698,0.00015583356,0.0006108416,0.00015915887,0.033225276,0.000029664701],"about_ca_topic_score_codex":0.00592972,"about_ca_topic_score_gemma":0.0077431547,"teacher_disagreement_score":0.00592972,"about_ca_system_score_codex":0.0008042622,"about_ca_system_score_gemma":0.0004190872,"threshold_uncertainty_score":0.014643848},"labels":[],"label_agreement":null},{"id":"W2051936868","doi":"10.1080/mmy.40.5.529.534","title":"Alternate week and combination itraconazole and terbinafine therapy for chromoblastomycosis caused by<i>Fonsecaea pedrosoi</i>in Brazil","year":2002,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":106,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women's College Hospital; University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Chromoblastomycosis; Terbinafine; Itraconazole; Medicine; Mycosis; Amphotericin B; Surgery; Dermatology; Antifungal","score_opus":0.01801881734124484,"score_gpt":0.2845143710011522,"score_spread":0.26649555365990735,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2051936868","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99405503,0.0040987777,0.00038503663,0.000097129334,0.000011060939,0.000040613944,0.000021634838,0.000016154077,0.0012745354],"genre_scores_gemma":[0.9985154,0.0008897344,0.00029009313,0.000057178157,0.000009586718,0.000009511915,0.000028688097,0.0000022958634,0.00019746953],"study_design_codex":"observational","study_design_gemma":"nonrandomized_trial","domain_scores_codex":[0.999864,0.00004474235,0.000020116096,0.000024578496,0.000018289556,0.000028255163],"domain_scores_gemma":[0.9998683,0.000030449617,0.000038861952,0.000011605283,0.000010144776,0.00004061252],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022030473,0.0002231026,0.00040927474,0.00024331125,0.00026707025,0.00023703108,0.00016689036,0.0002962431,0.00075897516],"category_scores_gemma":[0.00042579122,0.000115066934,0.0003078273,0.00014513849,0.00022113431,0.00015955887,0.00018907488,0.0003315886,0.00014513808],"study_design_candidate":"nonrandomized_trial","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008514656,0.0037238467,0.338406,0.0010885135,0.0003707329,0.06834875,0.0023444137,0.0009621345,0.24029118,0.00039930266,0.0016685454,0.33388188],"study_design_scores_gemma":[0.0017097463,0.037522074,0.7326732,0.00041315123,0.0006155559,0.16077657,0.0017847988,0.0024998796,0.038938493,0.0003056443,0.022671359,0.00008946217],"about_ca_topic_score_codex":0.0031592683,"about_ca_topic_score_gemma":0.005566672,"teacher_disagreement_score":0.0031592683,"about_ca_system_score_codex":0.00027756667,"about_ca_system_score_gemma":0.00023507664,"threshold_uncertainty_score":0.0062817335},"labels":[],"label_agreement":null},{"id":"W2055859982","doi":"10.1080/13693780500165461","title":"Pathogenicity of the<i>Chrysosporium</i>Anamorph of<i>Nannizziopsis vriesii</i>for veiled chameleons (<i>Chamaeleo calyptratus</i>)","year":2005,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":77,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Morris Animal Foundation","keywords":"Biology; Hypha; Conidium; Dermis; Chrysosporium; Fungus; Epidermis (zoology); Dermatomycosis; Microbiology; Botany; Anatomy","score_opus":0.006856623993839525,"score_gpt":0.2711106734912151,"score_spread":0.2642540494973756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2055859982","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99916553,0.00012549564,0.000064309235,0.000012621946,0.0000045026095,0.000016698523,0.00008521289,0.0000057012626,0.00051991345],"genre_scores_gemma":[0.9982844,0.000091069734,0.0001857337,0.000017150605,0.0000031879385,0.000016175274,0.00032114927,0.0000032853536,0.0010778684],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999772,0.00003132575,0.000013978819,0.00007108027,0.000050215716,0.00006147163],"domain_scores_gemma":[0.9996954,0.000053936146,0.0000788779,0.0000240088,0.00003686153,0.00011095047],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015805251,0.00059773517,0.00020471311,0.00063344016,0.00044311813,0.00043004128,0.00031435193,0.00059413526,0.0019967612],"category_scores_gemma":[0.00014587621,0.00020239924,0.00030481347,0.00013667786,0.00034521156,0.00027895495,0.00026797623,0.00064672297,0.00034351525],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044778973,0.00010935845,0.0065900446,0.000052560456,0.00001582433,0.000245256,0.00011520939,0.00005487845,0.9914657,0.000044348777,0.000033260774,0.00082574156],"study_design_scores_gemma":[0.00006384918,0.011567363,0.5798236,0.000029376517,0.00012346315,0.0018130445,0.0010016197,0.0008832459,0.4021758,0.00007351118,0.0023847413,0.00006034606],"about_ca_topic_score_codex":0.0068087764,"about_ca_topic_score_gemma":0.018064972,"teacher_disagreement_score":0.0068087764,"about_ca_system_score_codex":0.0008195153,"about_ca_system_score_gemma":0.00022800393,"threshold_uncertainty_score":0.013538301},"labels":[],"label_agreement":null},{"id":"W2057196461","doi":"10.1080/13693780400008191","title":"Attempted isolation of<i>Blastomyces dermatitidis</i>from native shrews in northern Wisconsin, USA","year":2005,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St Joseph's Health Centre; McMaster University; University of Toronto","funders":"","keywords":"Blastomyces dermatitidis; Peromyscus; Biology; Blastomyces; Blastomycosis; Microtus; Histoplasma capsulatum; Dimorphic fungus; Zoology; Sloth; Sigmodon hispidus; Shrew; Ecology; Histoplasmosis; Yeast","score_opus":0.013361676872944324,"score_gpt":0.28703279291028017,"score_spread":0.27367111603733585,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057196461","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9993912,0.00007560739,0.00007488277,0.0000056834724,9.022478e-7,0.000009876982,0.000092893024,0.0000013172084,0.00034760678],"genre_scores_gemma":[0.99777704,0.00026867187,0.0007689401,0.000030991887,0.0000039189654,0.000009949788,0.0005428661,0.0000012755905,0.00059628295],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993396,0.000010948769,0.000008611582,0.000016476524,0.000015171244,0.000014914941],"domain_scores_gemma":[0.99989784,0.000011603634,0.000034067984,0.0000072060907,0.000028293818,0.00002101852],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001154646,0.00020426644,0.00011521912,0.00049661077,0.000540976,0.00033931134,0.000107093656,0.00014123913,0.0004249654],"category_scores_gemma":[0.00017026206,0.00012645854,0.00006850964,0.00031148293,0.00013474071,0.00017679132,0.00018834615,0.00012779013,0.00014003796],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021829556,0.0000856489,0.79402745,0.00006587327,0.000022352226,0.0011089019,0.002031646,0.000064256616,0.19060923,0.000049415725,0.00017496353,0.011541956],"study_design_scores_gemma":[0.000004775443,0.00018721729,0.9880009,0.000015508645,0.000022199414,0.0013597228,0.0013769872,0.00011724656,0.0073226783,0.000015930278,0.001572211,0.0000045899023],"about_ca_topic_score_codex":0.013754534,"about_ca_topic_score_gemma":0.049428463,"teacher_disagreement_score":0.013754534,"about_ca_system_score_codex":0.00020523436,"about_ca_system_score_gemma":0.00019312641,"threshold_uncertainty_score":0.027348995},"labels":[],"label_agreement":null},{"id":"W2061057386","doi":"10.1080/13693780600860946","title":"Distribution of<i>Cryptococcus gattii</i>and<i>Cryptococcus neoformans</i>in decayed trunk wood of<i>Syzygium cumini</i>trees in north-western India","year":2006,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Department of Science and Technology, Ministry of Science and Technology, India; Indian National Science Academy","keywords":"Syzygium; Cryptococcus neoformans; Veterinary medicine; Biology; Cryptococcus gattii; Uttar pradesh; Bark (sound); Horticulture; Botany; Medicine; Microbiology; Ecology","score_opus":0.007092465784608415,"score_gpt":0.25453134535701105,"score_spread":0.24743887957240263,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2061057386","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9996226,0.000049541984,0.000016421467,0.0000044707517,5.9200875e-7,0.0000025029617,0.00006583941,0.0000016313445,0.0002364447],"genre_scores_gemma":[0.9995704,0.000087727945,0.00005637149,0.000008516562,0.0000013156141,0.0000021208477,0.00012367152,8.006237e-7,0.00014910594],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998807,0.000011286103,0.000012366337,0.000030200816,0.000019768966,0.000045680175],"domain_scores_gemma":[0.99975175,0.000032120002,0.000116031064,0.000013025391,0.00002901842,0.000058070247],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000066153254,0.00017981853,0.00012803065,0.0011974655,0.00034825996,0.00062865275,0.000181551,0.00018537928,0.00060547754],"category_scores_gemma":[0.00014351225,0.00013174945,0.00014605143,0.0008708079,0.00040012962,0.0002107536,0.00029572076,0.00017627928,0.00014834512],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007485314,0.000029158587,0.97749054,0.00003656978,0.000018579489,0.0006057281,0.0011579156,0.00005014759,0.016419869,0.00003315385,0.000051504278,0.0040320097],"study_design_scores_gemma":[6.17241e-7,0.000035653095,0.9979126,0.0000030179583,0.0000067108285,0.00045072014,0.0010342498,0.000018933843,0.00041903122,0.000004765529,0.0001116106,0.0000020926307],"about_ca_topic_score_codex":0.016704783,"about_ca_topic_score_gemma":0.037763063,"teacher_disagreement_score":0.016704783,"about_ca_system_score_codex":0.00028822754,"about_ca_system_score_gemma":0.00022057649,"threshold_uncertainty_score":0.033215106},"labels":[],"label_agreement":null},{"id":"W2066381032","doi":"10.1080/13693780400019990","title":"Long-term antifungal prophylaxis in high-risk hematopoietic stem cell transplant recipients","year":2005,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Aspergillosis; Voriconazole; Posaconazole; Immunosuppression; Micafungin; Medicine; Azole; Echinocandin; Itraconazole; Hematopoietic stem cell transplantation; Internal medicine; Transplantation; Immunology; Fluconazole; Antifungal; Dermatology","score_opus":0.026158646663571386,"score_gpt":0.32091418211527417,"score_spread":0.2947555354517028,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066381032","genre_codex":"empirical","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9850856,0.012902762,0.00024548147,0.00044737445,0.000046112727,0.00002013615,0.000046905952,0.000009178044,0.0011964155],"genre_scores_gemma":[0.99750084,0.0018116382,0.00016365165,0.00019364608,0.00008638058,0.000014504229,0.000083450395,0.0000010982734,0.00014480864],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99976724,0.000090113565,0.000029929519,0.000016597885,0.00004673612,0.0000493839],"domain_scores_gemma":[0.9992181,0.00015808002,0.00023287392,0.000025396614,0.000044387325,0.00032115704],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044128025,0.00011159604,0.00029956092,0.00016479463,0.00023332087,0.00033393584,0.00011975492,0.00029233977,0.0006900297],"category_scores_gemma":[0.0010237196,0.000046320158,0.00025766177,0.00022532846,0.00012417053,0.0002341818,0.00015230436,0.00041899955,0.0001348803],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009698395,0.0018572418,0.7977276,0.0003466178,0.0002990749,0.001920566,0.00024997105,0.00043731602,0.007950597,0.0002651841,0.0014083983,0.17783901],"study_design_scores_gemma":[0.00039873325,0.016597355,0.9709367,0.00027610915,0.00036360414,0.0033114555,0.0002726385,0.00075801596,0.0022363893,0.00042944588,0.0043957834,0.00002368461],"about_ca_topic_score_codex":0.00024796635,"about_ca_topic_score_gemma":0.00046302314,"teacher_disagreement_score":0.0006900297,"about_ca_system_score_codex":0.00019048032,"about_ca_system_score_gemma":0.00031636513,"threshold_uncertainty_score":0.0023337603},"labels":[],"label_agreement":null},{"id":"W2076418264","doi":"10.1093/mmy/myu040","title":"Effective method for the heat inactivation of Blastomyces dermatitidis","year":2014,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; Mount Sinai Hospital; Toronto Public Health; University of Toronto; Public Health Ontario","funders":"","keywords":"Blastomyces; Blastomyces dermatitidis; Microbiology; Biology; Blastomycosis; Chemistry; Immunology","score_opus":0.008626408888264863,"score_gpt":0.33232893654875156,"score_spread":0.3237025276604867,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076418264","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.38284907,0.012382221,0.57653475,0.0008062313,0.00095859513,0.0018972591,0.0028004732,0.0022400133,0.019531442],"genre_scores_gemma":[0.6767334,0.008122329,0.29269785,0.0004492143,0.000117706375,0.0010801926,0.004555197,0.00030367574,0.015940472],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992725,0.0001586992,0.000076595534,0.00013146992,0.0003005625,0.000060195678],"domain_scores_gemma":[0.99971384,0.00006292014,0.000056984565,0.000083287145,0.000059538874,0.000023394005],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040307903,0.00044249467,0.0002384769,0.0006113991,0.00038091626,0.00029684897,0.00030392667,0.00033759186,0.0028708691],"category_scores_gemma":[0.00041838246,0.00017882699,0.0002961897,0.00035555483,0.00022517618,0.00023631938,0.0003643663,0.0006744209,0.0021870087],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029706245,0.000028516579,0.0002682097,0.0001051163,0.0000048896036,0.00007058117,0.00003960381,0.00004092887,0.9909717,0.0001738418,0.0003806608,0.007886395],"study_design_scores_gemma":[0.0000056538183,0.00018437103,0.0030284047,0.00003480867,0.000023490566,0.0006117563,0.000029758618,0.00030240553,0.9816699,0.00010563193,0.013992289,0.000011585592],"about_ca_topic_score_codex":0.0003747311,"about_ca_topic_score_gemma":0.0005979423,"teacher_disagreement_score":0.0028708691,"about_ca_system_score_codex":0.00015697817,"about_ca_system_score_gemma":0.00023836823,"threshold_uncertainty_score":0.009603977},"labels":[],"label_agreement":null},{"id":"W2082480414","doi":"10.1080/1369378031000137350","title":"<i>Stachybotrys chartarum</i>: cause of human disease or media darling?","year":2003,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Indoor Air Quality and Microbial Exposure","field":"Environmental Science","cited_by":85,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Saint Mary's University; Carleton University; St. Mary's University; Natural Sciences and Engineering Research Council of Canada","funders":"","keywords":"Fungus; Disease; Biology; Asthma; Microbiology; Human disease; Medicine; Immunology; Pathology; Botany","score_opus":0.054601457622997646,"score_gpt":0.34710589091305943,"score_spread":0.2925044332900618,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082480414","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00021222944,0.99837947,0.000042487925,0.00026132466,0.00030120797,0.0000021343103,0.000012087552,0.0000044918647,0.0007846453],"genre_scores_gemma":[0.0012735748,0.99737036,0.000066716704,0.00021839044,0.00032837674,0.000001938271,0.000020194877,0.0000010427398,0.00071933516],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998227,0.00003254559,0.000029123057,0.000026603095,0.00007126585,0.000017846409],"domain_scores_gemma":[0.9997242,0.000094595656,0.00006580743,0.000008592821,0.000084979736,0.000021770302],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030265842,0.00071423355,0.0012368507,0.0022434348,0.00023000989,0.0008129796,0.0005514267,0.0008456398,0.0028844255],"category_scores_gemma":[0.00057710824,0.00014531131,0.00035570012,0.0024714826,0.00041872464,0.0012163317,0.00035787324,0.0004462105,0.0017595717],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013684132,0.00004470067,0.0011827889,0.023193147,0.00010666313,0.0006705248,0.00012580903,0.00019537246,0.002064144,0.0014841829,0.052610174,0.9181856],"study_design_scores_gemma":[0.000016796057,0.00019250283,0.00500702,0.008037316,0.00018094214,0.005174085,0.0005104071,0.000093836104,0.0010705735,0.0014463243,0.9782477,0.000022487806],"about_ca_topic_score_codex":0.0026947113,"about_ca_topic_score_gemma":0.004994122,"teacher_disagreement_score":0.0028844255,"about_ca_system_score_codex":0.0003845737,"about_ca_system_score_gemma":0.0007918721,"threshold_uncertainty_score":0.009649336},"labels":[],"label_agreement":null},{"id":"W2083546091","doi":"10.3109/13693786.2011.633106","title":"Fungal myelitis caused by<i>Phialosimplex</i>caninus in an immunosuppressed dog","year":2012,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Infectious Diseases and Mycology","field":"Veterinary","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Pathology; Prednisone; Bone marrow; Itraconazole; Medicine; Amphotericin B; Anemia; Biology; Internal medicine; Antifungal; Dermatology","score_opus":0.025822547693892074,"score_gpt":0.3411225227923885,"score_spread":0.31529997509849644,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083546091","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985006,0.00027593126,0.00009052457,0.000058125817,0.000007879749,0.000015410507,0.000018042585,0.000010106409,0.0010233725],"genre_scores_gemma":[0.9996339,0.0001285026,0.00006892932,0.000031054155,0.000012205039,0.0000021169792,0.00001610566,9.1875734e-7,0.00010634461],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99985135,0.000017741335,0.000013665061,0.00003018634,0.000030717405,0.000056231383],"domain_scores_gemma":[0.99968994,0.00005773711,0.00008306837,0.000019660087,0.000021571963,0.00012805287],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015642308,0.00048528833,0.00034808405,0.0006648856,0.00069457083,0.00046267544,0.00024402753,0.0006959736,0.00055771053],"category_scores_gemma":[0.00048596878,0.00029902192,0.00020759251,0.00022867472,0.0007666116,0.00025581758,0.0004007954,0.00047301652,0.0002087907],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013287675,0.0005152523,0.15084243,0.0002244379,0.000063030864,0.7676371,0.001141624,0.00039628815,0.06882276,0.00027402464,0.00046282072,0.008291518],"study_design_scores_gemma":[0.0001673022,0.0037054843,0.26477647,0.000057429683,0.000103685525,0.71194035,0.00088443764,0.0014380869,0.014429483,0.00017066054,0.0022985658,0.000027980022],"about_ca_topic_score_codex":0.0016876936,"about_ca_topic_score_gemma":0.0021163428,"teacher_disagreement_score":0.0016876936,"about_ca_system_score_codex":0.00052107003,"about_ca_system_score_gemma":0.00021590435,"threshold_uncertainty_score":0.0037806034},"labels":[],"label_agreement":null},{"id":"W2083602916","doi":"10.1080/13693780310001624556","title":"Antifungal susceptibility of 50<i>Candida</i>isolates from invasive mycoses in Chile","year":2004,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Itraconazole; Fluconazole; Microbiology; Biology; Amphotericin B; Candida glabrata; Azole; Candida parapsilosis; Mycosis; Antifungal; Immunology","score_opus":0.011568049288720558,"score_gpt":0.27848493243073924,"score_spread":0.26691688314201867,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083602916","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988926,0.0004883442,0.000050360515,0.000028734483,0.0000019687102,0.000019133264,0.00017959959,0.0000025129232,0.0003367308],"genre_scores_gemma":[0.9980233,0.00070867524,0.0002930182,0.00006319348,0.00000850849,0.000027420858,0.0005420044,0.0000028496909,0.00033102234],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997681,0.00004512362,0.00004281608,0.000038814058,0.00005731971,0.000047921418],"domain_scores_gemma":[0.9994536,0.00016487663,0.000159718,0.000031028245,0.000106808686,0.000084022875],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002608382,0.00030545433,0.00031659353,0.00069321593,0.00035065698,0.000454586,0.00022517318,0.00026272208,0.0007003713],"category_scores_gemma":[0.0011853194,0.00018752545,0.0002029949,0.00057962333,0.00028116044,0.00021823207,0.00035120765,0.000389261,0.00022773758],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010909883,0.0005561788,0.88918334,0.0005005389,0.00011391594,0.0044787074,0.0050890543,0.00026981172,0.07411656,0.00009016186,0.00052512693,0.02398568],"study_design_scores_gemma":[0.000090293775,0.0008896862,0.9760611,0.00010986588,0.000087782966,0.0044713714,0.0025724967,0.0002068176,0.012620626,0.00005818307,0.002805604,0.00002623935],"about_ca_topic_score_codex":0.006526536,"about_ca_topic_score_gemma":0.005423943,"teacher_disagreement_score":0.006526536,"about_ca_system_score_codex":0.0005717117,"about_ca_system_score_gemma":0.00040273182,"threshold_uncertainty_score":0.012977064},"labels":[],"label_agreement":null},{"id":"W2093895395","doi":"10.3109/13693786.2013.795664","title":"Thymol antifungal mode of action involves telomerase inhibition","year":2013,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"Guangdong Academy of Sciences; Natural Sciences and Engineering Research Council of Canada","keywords":"Thymol; Telomere; Saccharomyces cerevisiae; Telomerase; Biology; Molecular biology; Mutant; Transcription (linguistics); Biochemistry; Mode of action; Telomerase reverse transcriptase; Gene; Yeast; Growth inhibition; Chemistry; Cell growth; Food science; Essential oil","score_opus":0.010923435900270869,"score_gpt":0.2665554128651982,"score_spread":0.2556319769649273,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2093895395","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98042727,0.0066417987,0.0063252253,0.00011339287,0.000062695646,0.00007897827,0.0008646741,0.00021210453,0.005274063],"genre_scores_gemma":[0.9921256,0.0019918052,0.0019208473,0.000044985503,0.000013173762,0.000029583356,0.00039439922,0.00001646926,0.0034632129],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988747,0.000015698835,0.000011724023,0.000026191949,0.00003684868,0.000022089576],"domain_scores_gemma":[0.99989617,0.000023337921,0.000024422365,0.000013026851,0.000027401644,0.000015632906],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009281105,0.00041188754,0.00027993595,0.00020639077,0.00012004955,0.0003169635,0.00022128427,0.00025219537,0.0014180458],"category_scores_gemma":[0.000112635724,0.000093241375,0.00024376124,0.00017051195,0.00015537048,0.00014390869,0.00013907252,0.000343558,0.00031378752],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000062578736,0.000011931952,0.00018939195,0.000028061157,0.0000029557605,0.00003302095,0.0000034482794,0.000029767489,0.9978867,0.000049054564,0.000016002938,0.0016869925],"study_design_scores_gemma":[0.0000049451105,0.00018634152,0.0016414304,0.000003806805,0.0000073390966,0.00016408332,0.0000057746697,0.00016866003,0.9966273,0.000017150836,0.0011712167,0.0000018428373],"about_ca_topic_score_codex":0.00038910852,"about_ca_topic_score_gemma":0.0005777879,"teacher_disagreement_score":0.0014180458,"about_ca_system_score_codex":0.00020254926,"about_ca_system_score_gemma":0.00016033836,"threshold_uncertainty_score":0.004743874},"labels":[],"label_agreement":null},{"id":"W2096308348","doi":"10.3109/13693786.2012.738312","title":"Global burden of allergic bronchopulmonary aspergillosis with asthma and its complication chronic pulmonary aspergillosis in adults","year":2012,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":489,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; University of Toronto","funders":"National Institutes of Health; University of Delhi","keywords":"Allergic bronchopulmonary aspergillosis; Medicine; Asthma; Aspergillosis; Population; Pediatrics; Intensive care medicine; Immunology; Environmental health","score_opus":0.010153552697364971,"score_gpt":0.271582252729649,"score_spread":0.261428700032284,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2096308348","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5892477,0.26640493,0.0053545083,0.019537035,0.0013667747,0.00032271235,0.079456076,0.00031256166,0.03799766],"genre_scores_gemma":[0.90439224,0.07039156,0.0029557091,0.0021008751,0.0006115459,0.00022437092,0.016988657,0.000024589634,0.002310564],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99954766,0.00014360138,0.000071915994,0.0000753293,0.00010412797,0.000057294998],"domain_scores_gemma":[0.99953806,0.000054186192,0.00020814166,0.00002343191,0.000113485534,0.000062712665],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00056184304,0.00036861407,0.00034975854,0.000989924,0.0001722083,0.0005271879,0.00018446347,0.00047157722,0.0024935317],"category_scores_gemma":[0.0013464784,0.00014205032,0.0007954854,0.0016481024,0.00021574114,0.000437681,0.000634279,0.00042309574,0.0004501589],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021068622,0.00004727264,0.78708935,0.0036878209,0.0016613681,0.0010874948,0.00063288835,0.0017352786,0.0017705025,0.0035821795,0.049150497,0.1493447],"study_design_scores_gemma":[0.00005438417,0.00017887972,0.9127549,0.002429875,0.0009621888,0.0031438067,0.0006307174,0.0010927703,0.00031052236,0.001385018,0.07703358,0.0000232487],"about_ca_topic_score_codex":0.015656453,"about_ca_topic_score_gemma":0.011911211,"teacher_disagreement_score":0.015656453,"about_ca_system_score_codex":0.00047270843,"about_ca_system_score_gemma":0.00079074636,"threshold_uncertainty_score":0.031130612},"labels":[],"label_agreement":null},{"id":"W2100722163","doi":"10.3109/13693786.2013.813086","title":"Isolation, expression and characterization of a minor allergen from<i>Penicillium crustosum</i>","year":2013,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Allergic Rhinitis and Sensitization","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada","funders":"","keywords":"Allergen; Penicillium; Escherichia coli; Biology; Molecular biology; Epitope; Complementary DNA; Peptide sequence; Microbiology; Chemistry; Antibody; Biochemistry; Allergy; Genetics; Immunology; Gene","score_opus":0.009216110607097988,"score_gpt":0.2314212953456165,"score_spread":0.22220518473851852,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2100722163","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99428284,0.000587765,0.003280532,0.0001224104,0.000015795535,0.00002908381,0.0008243322,0.000043393684,0.0008139187],"genre_scores_gemma":[0.9762496,0.0012510121,0.010908437,0.00009166135,0.000024035391,0.000035705107,0.0066219894,0.000048725702,0.0047688303],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999286,0.000008681527,0.0000078074945,0.000021146803,0.000018949002,0.000014877087],"domain_scores_gemma":[0.9999082,0.000013944745,0.00003114282,0.000012336169,0.000011021884,0.000023457782],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000092046634,0.00038629607,0.00023875719,0.00015488679,0.00012744866,0.0003144835,0.00017204006,0.00019950472,0.0006451412],"category_scores_gemma":[0.0001518473,0.00011920781,0.00030031387,0.00021880817,0.00012662301,0.00014515122,0.00018433653,0.0004335821,0.0004540518],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015966145,0.000008389051,0.00010678285,0.000015334883,8.8061284e-7,0.00005572897,0.000007224079,0.000021254915,0.999331,0.00001807513,0.000011001884,0.0004085036],"study_design_scores_gemma":[0.000012466697,0.00023892337,0.023218244,0.000011992169,0.000025839874,0.0012823154,0.00009608161,0.00088540744,0.9679089,0.000051155246,0.006261626,0.000006983959],"about_ca_topic_score_codex":0.0005998396,"about_ca_topic_score_gemma":0.00045892384,"teacher_disagreement_score":0.0006451412,"about_ca_system_score_codex":0.000228935,"about_ca_system_score_gemma":0.00016981638,"threshold_uncertainty_score":0.002158165},"labels":[],"label_agreement":null},{"id":"W2104026708","doi":"10.3109/13693786.2010.547994","title":"Blastomycosis in children and adolescents: a 30-year experience from Manitoba","year":2011,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Saskatchewan; University of Manitoba","funders":"Northwestern University","keywords":"Blastomycosis; Medicine; Blastomyces dermatitidis; Disease; Pediatrics; Retrospective cohort study; Medical record; Amphotericin B; Dermatology; Surgery; Internal medicine; Antifungal","score_opus":0.014759684184118712,"score_gpt":0.2512059576839062,"score_spread":0.23644627349978747,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2104026708","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99880624,0.00051505654,0.000030146246,0.00008211019,0.0000045719057,0.000014371679,0.00005856667,0.0000031609825,0.00048583586],"genre_scores_gemma":[0.99734,0.0018594392,0.00009180576,0.00014722151,0.000012935487,0.000012133284,0.0001773429,0.000005000142,0.00035404065],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99963224,0.0000625246,0.00003875338,0.000036055353,0.00010920135,0.00012126294],"domain_scores_gemma":[0.99925095,0.00009246284,0.00021475302,0.000028076242,0.00014852459,0.0002651803],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003882604,0.000490011,0.0003436817,0.0009862346,0.0014311846,0.0007689939,0.0004062653,0.0004944863,0.0008463052],"category_scores_gemma":[0.0013662903,0.00038167796,0.00023006451,0.0013344302,0.0007050239,0.00040259422,0.00081583584,0.0006397354,0.0002802294],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031166233,0.0000992811,0.9770947,0.000036194,0.000015826576,0.012347104,0.0052166427,0.000023837325,0.000495405,0.00003373166,0.00025412688,0.004351927],"study_design_scores_gemma":[0.000010005554,0.0002851167,0.9595441,0.00007052786,0.000034533237,0.027272345,0.01008717,0.000094876654,0.00022176403,0.000031436306,0.002335385,0.000012678471],"about_ca_topic_score_codex":0.11190566,"about_ca_topic_score_gemma":0.217471,"teacher_disagreement_score":0.88809437,"about_ca_system_score_codex":0.001611421,"about_ca_system_score_gemma":0.0020842378,"threshold_uncertainty_score":0.22250861},"labels":[],"label_agreement":null},{"id":"W2104044474","doi":"10.1080/mmy.40.2.201.208","title":"Fungicidal activities of commonly used disinfectants and antifungal pharmaceutical spray preparations against clinical strains of<i>Aspergillus</i>and<i>Candida</i>species","year":2002,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antimicrobial agents and applications","field":"Chemistry","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; University of Toronto; Ministry of Health and Long Term Care; Mediprobe Research (Canada); Sunnybrook Health Science Centre","funders":"","keywords":"Microbiology; Aspergillus ochraceus; Chemistry; Benzalkonium chloride; Disinfectant; Biology; Food science; Ochratoxin A; Organic chemistry; Mycotoxin","score_opus":0.043285117209877405,"score_gpt":0.32146699472638607,"score_spread":0.2781818775165087,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2104044474","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98803896,0.010592994,0.00046122208,0.00006882608,0.000029871419,0.000037699916,0.00014259761,0.000025138597,0.0006025242],"genre_scores_gemma":[0.99289095,0.004208059,0.0020215458,0.0000631139,0.000035198933,0.000029167695,0.0002791006,0.0000081703465,0.00046478902],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995932,0.00010302264,0.00006817569,0.00007894282,0.000106761276,0.0000499267],"domain_scores_gemma":[0.99961925,0.000092381604,0.00012475734,0.000016888032,0.00008735661,0.000059344144],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035572168,0.00046872062,0.00045090943,0.00034347744,0.00014943561,0.000196114,0.00030225358,0.00034026892,0.0009445821],"category_scores_gemma":[0.00067874853,0.00014488545,0.00030754393,0.00033755452,0.0002022534,0.00018220827,0.00016291557,0.0002531718,0.00016195296],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001393602,0.00030450127,0.0035492296,0.0004683672,0.00005216482,0.00015465701,0.00009454499,0.00012245617,0.97383714,0.000038155868,0.00012329135,0.019862039],"study_design_scores_gemma":[0.00019906345,0.01591366,0.050047833,0.000102717306,0.00032830628,0.0014425631,0.00020473433,0.00072026934,0.9270458,0.00002682627,0.0039402503,0.000027991084],"about_ca_topic_score_codex":0.0007907452,"about_ca_topic_score_gemma":0.0016318581,"teacher_disagreement_score":0.0009445821,"about_ca_system_score_codex":0.00018140288,"about_ca_system_score_gemma":0.00023464134,"threshold_uncertainty_score":0.0031599402},"labels":[],"label_agreement":null},{"id":"W2105033070","doi":"10.1080/13693780701299333","title":"<i>Candida albicans</i>Als proteins mediate aggregation with bacteria and yeasts","year":2007,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":124,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Center for Research Resources; National Institute of General Medical Sciences; National Institutes of Health; U.S. Department of Veterans Affairs","keywords":"Candida albicans; Microbiology; Biofilm; Bacterial adhesin; Yeast; Corpus albicans; Bacteria; Biology; Saccharomyces cerevisiae; Chemistry; Virulence; Biochemistry; Gene; Genetics","score_opus":0.007528773816860386,"score_gpt":0.26895214852934646,"score_spread":0.26142337471248606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2105033070","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98905355,0.0031406863,0.0017685714,0.00020738003,0.000034739638,0.000022700806,0.0005111359,0.000046313,0.005214871],"genre_scores_gemma":[0.9937697,0.0008938835,0.0020785893,0.000074868,0.000016480466,0.000018956984,0.00047402046,0.000010492168,0.0026630515],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982387,0.000034210927,0.000013438703,0.0000213538,0.00006207928,0.00004504165],"domain_scores_gemma":[0.99991894,0.000019130082,0.000017409753,0.00000765765,0.000018260494,0.000018619658],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015492916,0.00028764995,0.0001292572,0.000205143,0.00023999352,0.00042957623,0.00018557489,0.00019784001,0.0015550088],"category_scores_gemma":[0.00016032599,0.00008729664,0.00019128826,0.00015552597,0.00017149646,0.00017169822,0.00025530418,0.00024662004,0.00042361955],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018014786,0.000032567485,0.0009724498,0.00006696404,0.000008443719,0.00012988922,0.00003792138,0.00012254862,0.99516255,0.00056886685,0.00039331705,0.002324399],"study_design_scores_gemma":[0.000010622207,0.00017224545,0.007863427,0.000013884034,0.000013040915,0.00040728154,0.00007480028,0.0010064656,0.9863625,0.00016200324,0.003908756,0.0000049669948],"about_ca_topic_score_codex":0.0010653412,"about_ca_topic_score_gemma":0.0010608359,"teacher_disagreement_score":0.0015550088,"about_ca_system_score_codex":0.0002920506,"about_ca_system_score_gemma":0.0001586406,"threshold_uncertainty_score":0.0052019954},"labels":[],"label_agreement":null},{"id":"W2106788020","doi":"10.3109/13693780903300319","title":"Activated dormant <i>Cryptococcus gattii</i> infection in a Dutch tourist who visited Vancouver Island (Canada): a molecular epidemiological approach","year":2010,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Cryptococcus gattii; Epidemiology; Molecular epidemiology; Tourism; Cryptococcosis; Quarantine; Geography; Biology; Microbiology; Medicine; Ecology; Archaeology; Pathology; Genetics","score_opus":0.007549682229054963,"score_gpt":0.26371038882362724,"score_spread":0.2561607065945723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106788020","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992217,0.00010150237,0.000049247963,0.0000770837,0.0000024396056,0.000013616271,0.0000334237,0.0000018153243,0.0004992247],"genre_scores_gemma":[0.9992623,0.00019994534,0.00012100022,0.00006639061,0.00000768058,0.0000027469316,0.00005442877,0.0000014526287,0.00028409157],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998056,0.000017952587,0.000014623495,0.00003234771,0.000039831226,0.0000896389],"domain_scores_gemma":[0.9997081,0.00004837029,0.00006935561,0.0000087305025,0.00005699734,0.00010839956],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009504695,0.00031681938,0.00019684652,0.00067805185,0.0013835409,0.0008411126,0.00039824555,0.00071153813,0.000702164],"category_scores_gemma":[0.0005503123,0.00031767684,0.00013646274,0.0005585132,0.0006165613,0.00024529183,0.00032126743,0.0008398119,0.00012830013],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002750069,0.00018066794,0.84729236,0.000058914244,0.000026125865,0.11868007,0.003536831,0.000102952385,0.023435282,0.00012256204,0.00054007047,0.005749174],"study_design_scores_gemma":[0.000016824279,0.00037172032,0.86853975,0.000035353405,0.00005366063,0.12067068,0.0061392616,0.00059300946,0.0022679768,0.000043647597,0.0012462761,0.000021697446],"about_ca_topic_score_codex":0.36037076,"about_ca_topic_score_gemma":0.3422085,"teacher_disagreement_score":0.63962924,"about_ca_system_score_codex":0.0015062038,"about_ca_system_score_gemma":0.0011486044,"threshold_uncertainty_score":0.7165463},"labels":[],"label_agreement":null},{"id":"W2107635807","doi":"10.1080/13693780410001712043","title":"Onychomycosis: a critical study of techniques and criteria for confirming the etiologic significance of nondermatophytes","year":2005,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":137,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women's College Hospital; Mediprobe Research (Canada); University of Toronto; Ministry of Health and Long Term Care; Ministry of Health; Sunnybrook Health Science Centre","funders":"","keywords":"Nail (fastener); Population; Etiology; Gold standard (test); Medicine; Pathology; Dermatology; Internal medicine; Materials science","score_opus":0.03223084187961209,"score_gpt":0.39435520866420415,"score_spread":0.36212436678459203,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107635807","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.66349274,0.25239447,0.049580816,0.005032018,0.0010026445,0.0021583573,0.00025357786,0.0003298645,0.025755512],"genre_scores_gemma":[0.86541224,0.06657014,0.063467704,0.00095645554,0.00088161393,0.00048994087,0.00034196617,0.00008764671,0.0017922635],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9939965,0.0021059313,0.0011698955,0.00054522033,0.001952955,0.00022947727],"domain_scores_gemma":[0.9885768,0.005341326,0.00095079374,0.00073588087,0.004025793,0.00036942156],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.015946517,0.0008071232,0.0008815575,0.009578407,0.00071247044,0.0017534748,0.0018096261,0.0010703692,0.0004803247],"category_scores_gemma":[0.0236299,0.00055562664,0.0005342028,0.0024098905,0.0024613487,0.0031968367,0.0011897938,0.0011887057,0.0003915491],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018602753,0.0009231593,0.3803461,0.0031609314,0.00016774521,0.015878769,0.0056220437,0.00086769625,0.053581957,0.0068750908,0.004826903,0.52588934],"study_design_scores_gemma":[0.00017252301,0.006053812,0.62568676,0.0041710297,0.000487082,0.1940614,0.0069572213,0.007907844,0.045019172,0.0045058634,0.10467319,0.00030408747],"about_ca_topic_score_codex":0.0023106786,"about_ca_topic_score_gemma":0.0030292962,"teacher_disagreement_score":0.015946517,"about_ca_system_score_codex":0.0013685517,"about_ca_system_score_gemma":0.0015793008,"threshold_uncertainty_score":0.084334254},"labels":[],"label_agreement":null},{"id":"W2108201008","doi":"10.1080/13693780802380545","title":"Identification of a new species,<i>Candida subhashii</i>, as a cause of peritonitis","year":2008,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; SickKids Foundation; Ministry of Health and Long Term Care; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Internal transcribed spacer; Biology; Phylogenetic tree; Candida albicans; Microbiology; Ribosomal RNA; Candida dubliniensis; Candida parapsilosis; Ribosomal DNA; Candida tropicalis; Clade; Gene; Corpus albicans; Genetics","score_opus":0.02943079930343519,"score_gpt":0.30836888598225054,"score_spread":0.27893808667881537,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2108201008","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9915462,0.0027775955,0.0015943067,0.0008007718,0.00013081494,0.00002766743,0.000055014647,0.00005068312,0.0030170232],"genre_scores_gemma":[0.9967552,0.0008095898,0.0014693594,0.00028535142,0.0002693069,0.0000069859957,0.0000611536,0.0000071172217,0.00033591],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9997702,0.000025948102,0.000027599783,0.000049836064,0.000047849233,0.00007850039],"domain_scores_gemma":[0.9992561,0.00024190932,0.00021229428,0.000074328964,0.00004718139,0.00016819505],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020501843,0.00058384996,0.00033201312,0.000726101,0.00076856423,0.00079110736,0.00038073273,0.0014016484,0.001062523],"category_scores_gemma":[0.0010740658,0.00026207487,0.00033565224,0.00036995768,0.0009019257,0.00059375656,0.0004798501,0.00094019866,0.0003006946],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022332509,0.000074662996,0.08445839,0.00020384055,0.000030357889,0.8590497,0.0008621654,0.0001672607,0.03141764,0.00081485615,0.0018716871,0.020826181],"study_design_scores_gemma":[0.000023828661,0.00016964615,0.029901175,0.000038751463,0.00005429772,0.95593405,0.0004431731,0.0004323764,0.00825031,0.00021037356,0.004524547,0.000017457862],"about_ca_topic_score_codex":0.0010112094,"about_ca_topic_score_gemma":0.0007998465,"teacher_disagreement_score":0.0014016484,"about_ca_system_score_codex":0.00027757435,"about_ca_system_score_gemma":0.0002413195,"threshold_uncertainty_score":0.0035544634},"labels":[],"label_agreement":null},{"id":"W2109042013","doi":"10.3109/13693786.2010.535031","title":"Disruption of sphingolipid biosynthetic gene<i>IPT1</i>reduces<i>Candida albicans</i>adhesion and prevents activation of human gingival epithelial cell innate immune defense","year":2010,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"National Institute of Dental and Craniofacial Research; National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health","keywords":"Candida albicans; TLR2; Biology; Innate immune system; Microbiology; Defensin; Beta defensin; Gene expression; Mutant; Corpus albicans; Gene; Cell biology; Molecular biology; Immune system; Immunology; Antimicrobial; Biochemistry","score_opus":0.006291157112635909,"score_gpt":0.23266262298158782,"score_spread":0.2263714658689519,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109042013","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997996,0.00031781459,0.00092629273,0.00004964861,0.000010460895,0.0000120179775,0.00019910627,0.000034225748,0.00045460084],"genre_scores_gemma":[0.9970452,0.00026294502,0.0013708893,0.000026505877,0.0000048210245,0.000012929826,0.0003866199,0.0000143826155,0.0008756501],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998714,0.000017480863,0.000014827527,0.000022295933,0.00004183,0.000032187876],"domain_scores_gemma":[0.9999149,0.000015291209,0.000030299561,0.000012097209,0.000007277549,0.000020141324],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008451967,0.0002695172,0.00021271265,0.00012667215,0.0000960261,0.00029385654,0.00018876758,0.00019649547,0.00074185967],"category_scores_gemma":[0.00009354809,0.000101505764,0.00025018293,0.00009395818,0.0001881873,0.00010916203,0.00016310396,0.0005023085,0.000221101],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043186315,0.000018744784,0.00008889704,0.000010517047,0.0000020417,0.00002311515,0.0000053718995,0.000024205741,0.9994098,0.000023249902,0.000010408297,0.00034050495],"study_design_scores_gemma":[0.0000031073077,0.00013525833,0.0020071254,0.0000019359566,0.0000066349376,0.00010313924,0.000015406447,0.00028274613,0.9968886,0.000008437288,0.0005460972,0.0000016398506],"about_ca_topic_score_codex":0.0008435811,"about_ca_topic_score_gemma":0.00061107526,"teacher_disagreement_score":0.0008435811,"about_ca_system_score_codex":0.00021234993,"about_ca_system_score_gemma":0.00015076279,"threshold_uncertainty_score":0.0024818182},"labels":[],"label_agreement":null},{"id":"W2109059076","doi":"10.1080/13693780802132763","title":"Seasonal variations in the clinical presentation of pulmonary and extrapulmonary blastomycosis","year":2008,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba","funders":"","keywords":"Blastomycosis; Blastomyces dermatitidis; Medicine; Incidence (geometry); Asymptomatic; Blastomyces; Pneumonia; Dimorphic fungus; Disease; Lung; Dermatology; Pathology; Internal medicine; Biology","score_opus":0.0509214139683884,"score_gpt":0.3618199162118447,"score_spread":0.31089850224345633,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109059076","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987925,0.000554756,0.000052356012,0.000032543452,0.000003790133,0.00000765909,0.00016653597,0.0000041329718,0.00038570605],"genre_scores_gemma":[0.99946636,0.00022317817,0.000044743032,0.000021778265,0.000007882212,0.0000049348487,0.00017886634,0.0000014124832,0.000050908206],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996997,0.00006510009,0.000042202646,0.000051562398,0.00006764847,0.00007379136],"domain_scores_gemma":[0.99876237,0.00025520002,0.0005481781,0.000050905448,0.00018458872,0.00019886676],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002730838,0.00015705258,0.00027827575,0.0007012559,0.00032307373,0.00032836755,0.00020587527,0.00022235679,0.00080635486],"category_scores_gemma":[0.0023001125,0.00015201578,0.0001133236,0.00088490814,0.0004319808,0.00029594047,0.00027413404,0.0001796225,0.00012961612],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029144223,0.000005987844,0.9981446,0.000007285972,0.0000059467447,0.00033251115,0.00013383094,0.000014906764,0.00025564583,0.0000061565456,0.000060672646,0.0010033018],"study_design_scores_gemma":[0.000001526296,0.000017208176,0.99855274,0.0000041126646,0.0000035722692,0.0010701937,0.00017366787,0.00002760666,0.00002989798,0.000006135027,0.00011186586,0.0000013733411],"about_ca_topic_score_codex":0.019998647,"about_ca_topic_score_gemma":0.030688077,"teacher_disagreement_score":0.019998647,"about_ca_system_score_codex":0.0004887301,"about_ca_system_score_gemma":0.00038978906,"threshold_uncertainty_score":0.039764464},"labels":[],"label_agreement":null},{"id":"W2111004394","doi":"10.1080/13693780310001610056","title":"Prevalence of<i>Malassezia</i>species on various body sites in clinically healthy subjects representing different age groups","year":2004,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; Women's College Hospital; University of Toronto; Mediprobe Research (Canada); Sunnybrook Health Science Centre","funders":"","keywords":"Malassezia; Forehead; Scalp; Age groups; Agar; Biology; Medicine; Dermatology; Demography; Surgery","score_opus":0.025328816465484117,"score_gpt":0.3348310505602206,"score_spread":0.3095022340947365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111004394","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9996785,0.00007855572,0.00003457347,0.0000042402717,7.789765e-7,0.00000371309,0.000035224013,0.000002217369,0.00016205735],"genre_scores_gemma":[0.99961746,0.00006735234,0.000087623615,0.000011485653,0.0000030661854,0.000004487773,0.000076571865,9.056525e-7,0.0001309204],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999808,0.00003784203,0.00002034482,0.00004563549,0.00003454357,0.000053630607],"domain_scores_gemma":[0.999468,0.00011744207,0.00018290606,0.000023792705,0.00008052354,0.00012731401],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019187847,0.00025888436,0.00029569087,0.000831617,0.0002809,0.0002936636,0.00010363548,0.0003455965,0.0013061994],"category_scores_gemma":[0.0007141781,0.00020199304,0.00014673235,0.00039566535,0.00031777314,0.0002775169,0.00023914587,0.00019957303,0.00026529885],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021405234,0.00005708457,0.98937047,0.000015438838,0.000013704675,0.000382538,0.00033409006,0.000021586877,0.007404079,0.000008825927,0.00003597245,0.0021422096],"study_design_scores_gemma":[0.000002691348,0.00037503528,0.99773836,0.0000019959207,0.0000067620877,0.0010864334,0.00025795013,0.000026094238,0.0004359184,0.000005598803,0.00006085833,0.0000022187419],"about_ca_topic_score_codex":0.0017985002,"about_ca_topic_score_gemma":0.0022141489,"teacher_disagreement_score":0.0017985002,"about_ca_system_score_codex":0.000108532106,"about_ca_system_score_gemma":0.000064905995,"threshold_uncertainty_score":0.004369676},"labels":[],"label_agreement":null},{"id":"W2113286944","doi":"10.3109/13693786.2013.807445","title":"Antioxidative and immunogenic properties of catalase-peroxidase protein in<i>Penicillium marneffei</i>","year":2013,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Chiang Mai University","keywords":"Penicillium marneffei; Catalase; Microbiology; Peroxidase; Hydrogen peroxide; Western blot; Biology; Yeast; Penicillium; Fungus; Oxidative stress; Gene; Enzyme; Biochemistry; Virology; Botany","score_opus":0.009887515026889077,"score_gpt":0.22806452114682466,"score_spread":0.21817700611993557,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2113286944","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985697,0.0006083476,0.00046373162,0.00003497982,0.000006634772,0.000005003591,0.00007397492,0.0000062775916,0.0002313356],"genre_scores_gemma":[0.99848396,0.00020063682,0.0004950332,0.000024794093,0.0000058704295,0.000004870434,0.00020772792,0.000002328993,0.0005748757],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99994755,0.000009776386,0.0000040719465,0.000012871595,0.000011654207,0.00001410568],"domain_scores_gemma":[0.9999174,0.000016383572,0.000024467688,0.000008043311,0.0000146382745,0.000019125402],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011214958,0.00021640163,0.00012137441,0.00016176932,0.00008190761,0.00018671044,0.00008006166,0.00016942077,0.00051594933],"category_scores_gemma":[0.00012312765,0.000071995666,0.0001946167,0.00008218528,0.00014623538,0.00009990116,0.00010717476,0.00025598545,0.00010353542],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005378629,0.00001688081,0.0007246477,0.00001618559,0.0000026676632,0.000069091686,0.000010824209,0.000006284594,0.99862397,0.000014239829,0.0000069149064,0.00045461912],"study_design_scores_gemma":[0.000015002787,0.0006238551,0.07642534,0.0000092772125,0.000029328181,0.0016974335,0.00008631334,0.0003708128,0.9194864,0.00007710626,0.0011744045,0.000004703104],"about_ca_topic_score_codex":0.00032870835,"about_ca_topic_score_gemma":0.00027944447,"teacher_disagreement_score":0.00051594933,"about_ca_system_score_codex":0.00011182719,"about_ca_system_score_gemma":0.00006721238,"threshold_uncertainty_score":0.0017259717},"labels":[],"label_agreement":null},{"id":"W2115322113","doi":"10.1080/13693780601188610","title":"Deep fungal dermatitis in three inland bearded dragons (<i>Pogona vitticeps</i>) caused by the<i>Chrysosporium</i>anamorph of<i>Nannizziopsis vriesii</i>","year":2007,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Ocular Infections and Treatments","field":"Medicine","cited_by":87,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Alberta Museum; University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Itraconazole; Trichophyton; Dermatology; Dermatomycosis; Miconazole; Biology; Lizard; Fungus; Terbinafine; Pathology; Medicine; Antifungal; Zoology; Botany","score_opus":0.007462969726300044,"score_gpt":0.25887277149047894,"score_spread":0.2514098017641789,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2115322113","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9997185,0.00004829732,0.000022879163,0.000009250076,0.0000016219014,0.000014003142,0.000008108927,0.0000018391631,0.00017547343],"genre_scores_gemma":[0.9991798,0.00013492866,0.00019261324,0.00006322478,0.0000051670054,0.000015096292,0.00006617564,0.0000010238239,0.00034192263],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.99985456,0.000028126604,0.000011290373,0.000040309023,0.000021872227,0.000043673404],"domain_scores_gemma":[0.99988437,0.000020309966,0.000031031115,0.0000090212125,0.000009728291,0.00004550017],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001698358,0.0004382906,0.00024211692,0.00044649557,0.00075711793,0.0004058749,0.00022888283,0.00077196787,0.0004237399],"category_scores_gemma":[0.00025548998,0.00025869167,0.00026228133,0.00014983355,0.0006995415,0.00020679481,0.00038008977,0.00037759598,0.00008121904],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0035986044,0.0032427835,0.51603264,0.000311558,0.00019876308,0.076965034,0.007900152,0.00038763075,0.37106737,0.00033660684,0.0005559996,0.019402886],"study_design_scores_gemma":[0.000083657855,0.008025553,0.9431489,0.000025921801,0.00007343463,0.03222165,0.0015886013,0.00028149944,0.013069697,0.00006587769,0.0013922727,0.00002305359],"about_ca_topic_score_codex":0.0031777252,"about_ca_topic_score_gemma":0.009107137,"teacher_disagreement_score":0.0031777252,"about_ca_system_score_codex":0.0005889149,"about_ca_system_score_gemma":0.00016573572,"threshold_uncertainty_score":0.00631845},"labels":[],"label_agreement":null},{"id":"W2117153281","doi":"10.1080/mmy.39.2.199.206","title":"Epidemiology of<i>Malassezia</i>yeasts associated with pityriasis versicolor in Ontario, Canada","year":2001,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":137,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Hospital for Sick Children; Ministry of Health and Long Term Care; University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Pityriasis; Malassezia; Epidemiology; Dermatology; Medicine; Microbiology; Biology; Pathology","score_opus":0.021941642655915503,"score_gpt":0.2683383955581849,"score_spread":0.2463967529022694,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2117153281","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9927079,0.0019665007,0.00020109859,0.00033320856,0.000012880051,0.00008004834,0.0010265661,0.00001932483,0.0036523961],"genre_scores_gemma":[0.9981116,0.0008623736,0.0001795566,0.000054147684,0.0000037619504,0.0000074040363,0.00026994947,0.0000034662826,0.00050771225],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99932396,0.00004272716,0.00004879795,0.000097334196,0.0002853299,0.000201878],"domain_scores_gemma":[0.9987118,0.00005228612,0.000379132,0.000028767363,0.0005175107,0.00031056252],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026607243,0.00037338768,0.00031400687,0.0018382322,0.0017958363,0.0010833689,0.00087277865,0.00029053702,0.0016386822],"category_scores_gemma":[0.0009324299,0.00036054998,0.00031684837,0.0030339228,0.0010022698,0.00027718084,0.0006882698,0.00041304887,0.000120175195],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007382497,0.000020109308,0.98955834,0.00009005734,0.00003450126,0.0006941405,0.00095476815,0.00013852747,0.0026518176,0.00011391276,0.00050821877,0.0051617036],"study_design_scores_gemma":[0.0000031735672,0.00002853205,0.9976223,0.000029830297,0.000012923166,0.00043226173,0.00092282344,0.00012687412,0.000114406954,0.000010309163,0.0006897044,0.000006876807],"about_ca_topic_score_codex":0.9884006,"about_ca_topic_score_gemma":0.9919503,"teacher_disagreement_score":0.015899079,"about_ca_system_score_codex":0.015899079,"about_ca_system_score_gemma":0.016935272,"threshold_uncertainty_score":0.115356445},"labels":[],"label_agreement":null},{"id":"W2118499822","doi":"10.3109/13693780802712523","title":"<i>In vitro</i>pharmacodynamic characteristics of griseofulvin against dermatophyte isolates of<i>Trichophyton tonsurans</i>from tinea capitis patients","year":2009,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mediprobe Research (Canada); Sunnybrook Health Science Centre","funders":"","keywords":"Trichophyton tonsurans; Tinea capitis; Griseofulvin; Dermatophyte; Microsporum canis; Medicine; Microsporum; Microbiology; Dermatology; Canis; Trichophyton; Veterinary medicine; Antifungal; Biology; Botany","score_opus":0.00353927819580977,"score_gpt":0.24743632084426734,"score_spread":0.24389704264845757,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2118499822","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967224,0.0015733714,0.0002815359,0.00008297634,0.000028410643,0.00003138294,0.00044234237,0.00001756677,0.00082007726],"genre_scores_gemma":[0.9975464,0.00071599253,0.00041621228,0.00009247031,0.000026133916,0.000018249875,0.00078019896,0.0000044282074,0.00039986797],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99969816,0.00009522478,0.00003342867,0.00004594242,0.00006733324,0.00005990787],"domain_scores_gemma":[0.9996805,0.0001153904,0.00006966924,0.000016295135,0.00006357082,0.00005459183],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025997715,0.00037607708,0.00041180628,0.000217213,0.0001463982,0.00029930228,0.00017607953,0.00034976722,0.0010486121],"category_scores_gemma":[0.0007770405,0.00012898534,0.0004448856,0.00022666507,0.00018371502,0.00016440822,0.00012686955,0.00039952603,0.0002352596],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010181806,0.0016070253,0.03938219,0.00043693808,0.00022948337,0.0014201783,0.00038047446,0.0026488598,0.90376145,0.000106691994,0.0012051988,0.038639765],"study_design_scores_gemma":[0.00048612864,0.06877287,0.292407,0.00009029936,0.0004762685,0.0069609256,0.0005327986,0.0043102205,0.6179078,0.000106429,0.007868048,0.00008107322],"about_ca_topic_score_codex":0.0010089008,"about_ca_topic_score_gemma":0.0010724232,"teacher_disagreement_score":0.0010486121,"about_ca_system_score_codex":0.00020385996,"about_ca_system_score_gemma":0.00016272214,"threshold_uncertainty_score":0.0035079718},"labels":[],"label_agreement":null},{"id":"W2118839790","doi":"10.1080/13693780410001731583","title":"<i>In vitro</i>activities of posaconazole, ravuconazole, terbinafine, itraconazole and fluconazole against dermatophyte, yeast and non-dermatophyte species","year":2004,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":78,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mediprobe Research (Canada); Sunnybrook Health Science Centre","funders":"","keywords":"Posaconazole; Terbinafine; Dermatophyte; Itraconazole; Microbiology; Microsporum; Fluconazole; Biology; Trichophyton; Pharmacology; Antifungal","score_opus":0.004343832484835038,"score_gpt":0.23430631071067629,"score_spread":0.22996247822584126,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2118839790","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9887012,0.0067836107,0.0009672196,0.00010598811,0.000058121295,0.00006713866,0.0009566009,0.000041179712,0.0023187725],"genre_scores_gemma":[0.98751044,0.004067651,0.0033283147,0.00009873671,0.00006796911,0.0000722766,0.003340443,0.000012196211,0.0015020508],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991053,0.00032924514,0.00015705633,0.000109193024,0.00020222938,0.00009698538],"domain_scores_gemma":[0.9995449,0.0001766597,0.00008898464,0.000031103373,0.00011680669,0.00004151566],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045459947,0.0004811358,0.0004322481,0.00030228382,0.00016561076,0.00028561402,0.00026907917,0.0003190615,0.0012932307],"category_scores_gemma":[0.0006032573,0.00016518967,0.00045229602,0.00046984525,0.00022112376,0.00022778861,0.00018321452,0.00031824733,0.00042729467],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013462907,0.00035296928,0.0031608627,0.0004044683,0.00007584402,0.00018836692,0.00007487225,0.000826773,0.98618615,0.00006371644,0.0002580218,0.007061675],"study_design_scores_gemma":[0.000085650485,0.009097058,0.020198472,0.000031224037,0.00016084926,0.0009659704,0.00006170138,0.0014384855,0.96536136,0.00004120029,0.0025345162,0.000023425611],"about_ca_topic_score_codex":0.0013790906,"about_ca_topic_score_gemma":0.0018421876,"teacher_disagreement_score":0.0013790906,"about_ca_system_score_codex":0.00027528306,"about_ca_system_score_gemma":0.00023185392,"threshold_uncertainty_score":0.0043263435},"labels":[],"label_agreement":null},{"id":"W2121397453","doi":"10.3109/13693781003767584","title":"Disruption of fungal cell wall by antifungal<i>Echinacea</i>extracts","year":2010,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Herbal Medicine Research Studies","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Carleton University","funders":"Guangdong Academy of Sciences; Natural Sciences and Engineering Research Council of Canada","keywords":"Echinacea (animal); Cryptococcus neoformans; Biology; Mutant; Saccharomyces cerevisiae; Microbiology; Cell wall; Antimicrobial; Gene; Biochemistry","score_opus":0.009258363507638425,"score_gpt":0.3229148094863827,"score_spread":0.31365644597874426,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121397453","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945353,0.00054331083,0.0032238078,0.00006143402,0.0000098932705,0.000035281915,0.00075691385,0.00006134807,0.000772816],"genre_scores_gemma":[0.98788726,0.00067224965,0.007676208,0.00007933067,0.0000043576483,0.00004231453,0.0019622485,0.00004659893,0.0016293945],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984705,0.000023922474,0.000024988616,0.000030553074,0.000045677767,0.00002775847],"domain_scores_gemma":[0.99986255,0.000032104268,0.000047578207,0.000020045363,0.00001970899,0.000018014049],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014652556,0.00035095666,0.0003028856,0.00024867448,0.00015264355,0.00030000508,0.00019513773,0.00019028428,0.0006452014],"category_scores_gemma":[0.00015205855,0.00012455012,0.0002970675,0.00027690612,0.00017659825,0.00017602094,0.00023396735,0.00036832533,0.00023657456],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019764708,0.000007761999,0.00013069487,0.0000098625305,0.0000020025466,0.000015902713,0.0000038944117,0.000028279093,0.99938893,0.000014303266,0.00000577295,0.00037282368],"study_design_scores_gemma":[0.000002270929,0.00007055684,0.0019708367,0.0000018079162,0.0000064779974,0.00006987523,0.000010091232,0.000104363,0.99730444,0.000009964547,0.00044803237,0.0000012798997],"about_ca_topic_score_codex":0.0006948956,"about_ca_topic_score_gemma":0.0010417342,"teacher_disagreement_score":0.0006948956,"about_ca_system_score_codex":0.0002593775,"about_ca_system_score_gemma":0.00016401536,"threshold_uncertainty_score":0.0021584034},"labels":[],"label_agreement":null},{"id":"W2121845748","doi":"10.1080/13693780500411097","title":"Isolated endogenous endophthalmitis due to a sporodochial-forming<i>Phialemonium curvatum</i>acquired through intracavernous autoinjections","year":2005,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Ocular Infections and Treatments","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Alberta","keywords":"Enucleation; Endophthalmitis; Acremonium; Microbiology; Medicine; Biology; Dermatology; Ophthalmology","score_opus":0.020782988017464754,"score_gpt":0.28833329619359527,"score_spread":0.2675503081761305,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121845748","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99496907,0.00078077934,0.0020445343,0.00008454723,0.000009824233,0.000014970084,0.000023047298,0.000056167133,0.0020170836],"genre_scores_gemma":[0.99888295,0.00020672339,0.0005080068,0.000040856565,0.000009688934,0.0000026375674,0.0000166861,0.000005356338,0.00032727935],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99983525,0.000022813894,0.000012322313,0.000039679162,0.000037030433,0.00005293469],"domain_scores_gemma":[0.99960357,0.00008692477,0.00014819237,0.00006897037,0.00002313933,0.000069255155],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000101262136,0.0003840218,0.00019890186,0.0003151775,0.00038282236,0.00050240115,0.00024440332,0.00048089804,0.0011316771],"category_scores_gemma":[0.0005145239,0.00020097505,0.00016590681,0.00014927881,0.0005876544,0.00032846179,0.00039269243,0.0006400897,0.0002560328],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037604678,0.0001604946,0.07184229,0.00020095085,0.000051499006,0.81237507,0.00081785297,0.00016176293,0.09108773,0.0008589346,0.00029123964,0.021776132],"study_design_scores_gemma":[0.000031495452,0.00049900764,0.026646575,0.000017085282,0.00005832936,0.9277481,0.00030419277,0.0006225086,0.041511077,0.00018399021,0.0023631041,0.000014575193],"about_ca_topic_score_codex":0.00094680773,"about_ca_topic_score_gemma":0.0014785222,"teacher_disagreement_score":0.0011316771,"about_ca_system_score_codex":0.00046238516,"about_ca_system_score_gemma":0.00025957814,"threshold_uncertainty_score":0.0037858486},"labels":[],"label_agreement":null},{"id":"W2122986119","doi":"10.3109/13693786.2010.512300","title":"Early treatment of candidemia in adults: a review","year":2010,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":96,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Invasive candidiasis; Antifungal; Medicine; Intensive care medicine; Biomarker; Retrospective cohort study; Clinical significance; Internal medicine; Biology; Fluconazole; Dermatology","score_opus":0.032670844078457405,"score_gpt":0.39514279814999054,"score_spread":0.36247195407153315,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122986119","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00008328294,0.9995957,0.000025239986,0.000052951244,0.000043878365,0.000004150595,0.000011727256,0.000002330768,0.00018075065],"genre_scores_gemma":[0.0004836499,0.99928445,0.000079248406,0.000041794046,0.000036390473,0.000004150316,0.00001469704,4.9523993e-7,0.000055081135],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99971384,0.00005259416,0.0000836345,0.000047007987,0.00008864796,0.00001420811],"domain_scores_gemma":[0.99931514,0.0003942284,0.00013238493,0.000013759011,0.0001082611,0.000036234367],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00052370253,0.0008263249,0.0018580828,0.0025539473,0.0002297745,0.00066944933,0.0011700011,0.00081764493,0.0034029486],"category_scores_gemma":[0.0014955864,0.00026336685,0.0006909164,0.0029589338,0.00033469123,0.0009790568,0.00044435752,0.00087678287,0.00080297334],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012028833,0.00006989069,0.00029620956,0.07655111,0.00021129206,0.00023945815,0.000060789585,0.00016680246,0.000462213,0.00055653555,0.015269915,0.9059956],"study_design_scores_gemma":[0.00013717655,0.00039720238,0.0071760826,0.09223126,0.0019205228,0.006593369,0.0002533392,0.00024787476,0.0008122223,0.0013959194,0.8887805,0.000054597127],"about_ca_topic_score_codex":0.0017516621,"about_ca_topic_score_gemma":0.0026155543,"teacher_disagreement_score":0.0034029486,"about_ca_system_score_codex":0.0004310265,"about_ca_system_score_gemma":0.001084978,"threshold_uncertainty_score":0.01138401},"labels":[],"label_agreement":null},{"id":"W2125131696","doi":"10.1080/mmy.39.4.321.328","title":"Comparative efficacies of commonly used disinfectants and antifungal pharmaceutical spray preparations against dermatophytic fungi","year":2001,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Trichophyton; Bifonazole; Microbiology; Microsporum; Ammonium; Terbinafine; Chemistry; Dermatophyte; Griseofulvin; Fungicide; Trichophyton tonsurans; Biology; Antifungal; Organic chemistry; Medicine; Botany; Dermatology; Itraconazole","score_opus":0.039700681229219485,"score_gpt":0.3776373371903428,"score_spread":0.3379366559611233,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2125131696","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99350715,0.0047483463,0.00071981247,0.000048042442,0.000024905914,0.000051161256,0.00017076927,0.00002333032,0.0007065096],"genre_scores_gemma":[0.98961675,0.004773934,0.0041513676,0.00004730456,0.000030823492,0.000057368637,0.0003907969,0.000014717348,0.00091700966],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994924,0.00012901422,0.00008431278,0.00009276379,0.000154146,0.000047268084],"domain_scores_gemma":[0.99941576,0.00018628126,0.00014432803,0.00003575393,0.00013372433,0.00008429948],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036452524,0.00056558097,0.00044018222,0.00053536246,0.0001811766,0.00031564626,0.0003432817,0.00041176722,0.001132972],"category_scores_gemma":[0.0006919387,0.00020893347,0.00033380694,0.00040872672,0.0002005868,0.00030078433,0.0002247682,0.0003156213,0.00019548803],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00057947607,0.00020539382,0.0011924065,0.00028885095,0.000039142047,0.00008455642,0.000067886314,0.0001421356,0.98866105,0.000032038213,0.000040369414,0.008666718],"study_design_scores_gemma":[0.000051369996,0.011491414,0.016457865,0.00004673595,0.00020189131,0.00063521374,0.000117787764,0.00039455408,0.96837217,0.00002333496,0.0021863417,0.000021360416],"about_ca_topic_score_codex":0.00051351724,"about_ca_topic_score_gemma":0.0013977621,"teacher_disagreement_score":0.001132972,"about_ca_system_score_codex":0.00015567834,"about_ca_system_score_gemma":0.00018393148,"threshold_uncertainty_score":0.0037901402},"labels":[],"label_agreement":null},{"id":"W2127221509","doi":"10.3109/13693780903496617","title":"Cutaneous cryptococcosis in solid organ transplant recipients","year":2010,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Alberta Hospital; University of Alberta; University Health Network; Western University","funders":"National Institute of Allergy and Infectious Diseases; Astellas Pharma","keywords":"Cryptococcosis; Medicine; Fluconazole; Mycosis; Amphotericin B; Internal medicine; Transplantation; Surgery; Dermatology; Gastroenterology; Pathology; Antifungal","score_opus":0.00829324634053131,"score_gpt":0.298361163062831,"score_spread":0.2900679167222997,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2127221509","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9996636,0.00011764543,0.0000380763,0.0000103149,0.0000021447834,0.0000035897986,0.000027300777,0.000001869932,0.00013539304],"genre_scores_gemma":[0.99975246,0.000102870865,0.000030815732,0.000010481705,0.0000072202374,0.0000026258049,0.000056417524,6.860353e-7,0.000036335023],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998097,0.000052839678,0.000024208131,0.000033785378,0.000038610033,0.000040898958],"domain_scores_gemma":[0.99919647,0.00012194354,0.00033726636,0.00004813832,0.00003785782,0.0002583924],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036980322,0.00019203697,0.00022631373,0.00035814938,0.00031190788,0.0004774766,0.000116048075,0.00022026083,0.0009502378],"category_scores_gemma":[0.0012630082,0.00017811178,0.00020736484,0.0003226776,0.00026681472,0.00027806012,0.0002927202,0.0003639362,0.00021010735],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025588894,0.00006915947,0.99496526,0.000012432337,0.000016898724,0.00085223344,0.000060529936,0.00005944279,0.0010590146,0.000013610036,0.000080502374,0.0025549529],"study_design_scores_gemma":[0.000030327243,0.000637033,0.99075174,0.000014124086,0.00001866509,0.007484225,0.00015337349,0.00031188154,0.00038038509,0.000029159197,0.0001836234,0.000005349729],"about_ca_topic_score_codex":0.0004456496,"about_ca_topic_score_gemma":0.00031431537,"teacher_disagreement_score":0.0009502378,"about_ca_system_score_codex":0.00012384582,"about_ca_system_score_gemma":0.00013812481,"threshold_uncertainty_score":0.0031788945},"labels":[],"label_agreement":null},{"id":"W2131467671","doi":"10.1080/13693780500220415","title":"Emergence of disseminated candidiasis caused by<i>Candida krusei</i>during treatment with caspofungin: Case report and review of literature","year":2005,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôtel-Dieu de Québec; Hôpital Fleurimont; Centre Hospitalier Universitaire de Sherbrooke; Centre hospitalier universitaire de Québec","funders":"","keywords":"Caspofungin; Candida krusei; Flucytosine; Voriconazole; Amphotericin B; Internal medicine; Medicine; Biology; Microbiology; Antifungal; Fluconazole","score_opus":0.006903782364512709,"score_gpt":0.29010519496120374,"score_spread":0.283201412596691,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2131467671","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6674064,0.30203146,0.0043277466,0.0022898593,0.00092368544,0.00015812299,0.00024896173,0.00026272566,0.022351086],"genre_scores_gemma":[0.8996464,0.093098976,0.002001315,0.001287168,0.0015149033,0.00004364621,0.0002173073,0.000022857348,0.0021674589],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9996569,0.000058142094,0.00008448201,0.000057905036,0.00007083695,0.00007172357],"domain_scores_gemma":[0.99923456,0.00035076812,0.00022080238,0.000043464926,0.00007419945,0.00007610703],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029148257,0.0005844051,0.0006024773,0.001529889,0.0004655074,0.0009981485,0.0007326782,0.0017781858,0.0017751601],"category_scores_gemma":[0.0012505596,0.0003269771,0.00036844876,0.0009289923,0.00062572764,0.00084865355,0.00030983207,0.00053900445,0.0009757097],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008815854,0.00010154895,0.025756879,0.0011265067,0.000087646506,0.9225405,0.00039716146,0.0000952386,0.0036658274,0.00016305505,0.0025500155,0.043427467],"study_design_scores_gemma":[0.000012470193,0.000106829706,0.010362125,0.00016910743,0.00008993707,0.9819163,0.00022855765,0.00009937493,0.00084958755,0.00006628952,0.006084133,0.000015277925],"about_ca_topic_score_codex":0.0007635171,"about_ca_topic_score_gemma":0.0012208738,"teacher_disagreement_score":0.0017781858,"about_ca_system_score_codex":0.00031685893,"about_ca_system_score_gemma":0.00038608973,"threshold_uncertainty_score":0.0059384704},"labels":[],"label_agreement":null},{"id":"W2132606068","doi":"10.3109/13693780802572547","title":"Microecology of<i>Blastomyces dermatitidis</i>: the Ammonia Hypothesis","year":2009,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Blastomyces dermatitidis; Ammonia; Ammonium; Microbiology; Biology; Ammonium sulfate; Fungus; Yeast extract; Mycelium; Spore; Inoculation; Chemistry; Food science; Fermentation; Botany; Biochemistry; Horticulture; Blastomycosis; Chromatography","score_opus":0.006972084936650299,"score_gpt":0.19801094143719722,"score_spread":0.19103885650054692,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2132606068","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949753,0.000712369,0.0013024346,0.000085538755,0.00000986063,0.000021305237,0.00020607557,0.000019076304,0.0026680308],"genre_scores_gemma":[0.99722725,0.0005585458,0.0012454698,0.000038889044,0.000009557047,0.000010387509,0.0002347144,0.0000036232655,0.00067170954],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99985945,0.000025991607,0.000011889581,0.00004114131,0.000025655694,0.000035820045],"domain_scores_gemma":[0.99989533,0.00001553765,0.000026802163,0.000010375349,0.000028151742,0.000023757588],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001044053,0.0003691083,0.00018429628,0.00021026547,0.00022864291,0.00046760586,0.00020175974,0.0003644693,0.0008707337],"category_scores_gemma":[0.00016985621,0.00012543245,0.00010153578,0.00015661021,0.00032061632,0.00035038247,0.0003196918,0.00016790039,0.00028592028],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030858972,0.000035378886,0.038162004,0.00009704957,0.000009654023,0.0008453112,0.0001092308,0.00016843493,0.954691,0.00031684243,0.00007367822,0.0051828725],"study_design_scores_gemma":[0.000024134873,0.0010999218,0.34664497,0.00006375111,0.00004152346,0.0067406525,0.0012194656,0.00103127,0.6353869,0.0007961669,0.006925968,0.000025251244],"about_ca_topic_score_codex":0.0018892384,"about_ca_topic_score_gemma":0.002195608,"teacher_disagreement_score":0.0018892384,"about_ca_system_score_codex":0.00021221329,"about_ca_system_score_gemma":0.00018353625,"threshold_uncertainty_score":0.0037564635},"labels":[],"label_agreement":null},{"id":"W2133570481","doi":"10.1080/13693780802124026","title":"The expanding host tree species spectrum of<i>Cryptococcus gattii</i>and<i>Cryptococcus neoformans</i>and their isolations from surrounding soil in India","year":2008,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Indian Council of Medical Research; Postgraduate Institute of Medical Education and Research, Chandigarh; Indian National Science Academy","keywords":"Cryptococcus neoformans; Biology; Cryptococcus gattii; Cryptococcus; Host (biology); Cryptococcosis; Botany; Veterinary medicine; Ecology; Microbiology","score_opus":0.016867511733290437,"score_gpt":0.25457464203720204,"score_spread":0.2377071303039116,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2133570481","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9994929,0.000054785753,0.000050179202,0.0000053143463,9.823664e-7,0.0000025312172,0.00003911685,0.0000031082168,0.00035112724],"genre_scores_gemma":[0.9996706,0.00008209516,0.00008961244,0.000008374185,0.0000015992247,0.0000015303352,0.00006341651,0.0000011875987,0.00008160551],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997557,0.000029048686,0.000021492186,0.000054821066,0.00004861706,0.00009032546],"domain_scores_gemma":[0.99956745,0.00008476925,0.00015076442,0.000028741943,0.00006306693,0.00010526407],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000099942416,0.00018078902,0.00017116059,0.0012800461,0.0004916007,0.00067486323,0.00025456017,0.00018606105,0.00053600577],"category_scores_gemma":[0.0002965166,0.00018827918,0.00017201004,0.0007709217,0.00043574124,0.0002853462,0.0003861168,0.00022406188,0.00016794537],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000081353974,0.000033915392,0.9724753,0.000033535354,0.00001762678,0.00065721624,0.0016690906,0.00006908585,0.018006451,0.000058705416,0.000048184138,0.0068494934],"study_design_scores_gemma":[0.0000011594142,0.00007520087,0.99534106,0.0000073250967,0.000013914292,0.001772169,0.0015106616,0.000055180237,0.00092282123,0.00001905969,0.00027607544,0.0000053518515],"about_ca_topic_score_codex":0.0094194785,"about_ca_topic_score_gemma":0.018976167,"teacher_disagreement_score":0.0094194785,"about_ca_system_score_codex":0.00022770543,"about_ca_system_score_gemma":0.0002453938,"threshold_uncertainty_score":0.01872927},"labels":[],"label_agreement":null},{"id":"W2140668119","doi":"10.3109/13693786.2011.560196","title":"Surveillance for Cryptococcus gattii in horses of Vancouver Island, British Columbia, Canada","year":2011,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Abbotsford Veterinary Clinic; Vancouver Coastal Health; University of Saskatchewan; University of British Columbia","funders":"Centers for Disease Control and Prevention","keywords":"Cryptococcus gattii; Cryptococcosis; Cryptococcus; Veterinary medicine; Horse; Colonization; Medicine; Geography; Biology; Immunology; Ecology; Microbiology","score_opus":0.014405237907299197,"score_gpt":0.2398664264755528,"score_spread":0.22546118856825362,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2140668119","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98925495,0.0022303916,0.000090971684,0.00045842573,0.000015202808,0.000091018635,0.0010777549,0.000014080291,0.0067671733],"genre_scores_gemma":[0.9951493,0.0016258049,0.00030560253,0.00020510335,0.000006394939,0.0000150024825,0.0005989864,0.0000029072658,0.0020908304],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996493,0.000024737386,0.000020750906,0.000040285875,0.00015470322,0.00011022199],"domain_scores_gemma":[0.9992741,0.000032772725,0.000083074054,0.000009310132,0.0003895212,0.00021127974],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002499972,0.0002460423,0.00015785474,0.0011114182,0.0016722708,0.00067791616,0.0004801757,0.00034232947,0.0009845936],"category_scores_gemma":[0.000696304,0.00016242744,0.0000722786,0.0012132123,0.00041334348,0.00016233996,0.00027406926,0.00037359595,0.00013857613],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013156756,0.00006741998,0.96678627,0.00010082787,0.000019133211,0.0013459176,0.0012983283,0.000131113,0.0048507955,0.00006859398,0.0029378566,0.022262296],"study_design_scores_gemma":[0.000006145439,0.00006789416,0.99426335,0.000073754585,0.000010031602,0.0004567068,0.0015997699,0.00018425279,0.0002879227,0.000012661292,0.0030310652,0.0000064728515],"about_ca_topic_score_codex":0.9762497,"about_ca_topic_score_gemma":0.9918241,"teacher_disagreement_score":0.023750305,"about_ca_system_score_codex":0.007833784,"about_ca_system_score_gemma":0.008234053,"threshold_uncertainty_score":0.056838334},"labels":[],"label_agreement":null},{"id":"W2140872061","doi":"10.3109/13693786.2011.598878","title":"Comparison of the FXG™: RESP (Asp+) real-time PCR assay with direct immunofluorescence and calcofluor white staining for the detection of<i>Pneumocystis jirovecii</i>in respiratory specimens","year":2012,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Pneumocystis jirovecii pneumonia detection and treatment","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto; Public Health Agency of Canada","funders":"","keywords":"Pneumocystis jirovecii; Staining; Immunofluorescence; Biology; Molecular biology; Microbiology; Pathology; Virology; Antibody; Medicine; Immunology","score_opus":0.020805530897034675,"score_gpt":0.3051752670068383,"score_spread":0.2843697361098036,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2140872061","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98196584,0.0017853836,0.014181429,0.00009265323,0.00007949122,0.00010720262,0.00024091944,0.000113649585,0.0014334909],"genre_scores_gemma":[0.94994414,0.00052538066,0.047924034,0.00012240135,0.000048168968,0.00012635291,0.00060972455,0.000023756413,0.0006760777],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9887533,0.0045096492,0.0008681537,0.0018285105,0.0036478743,0.00039249717],"domain_scores_gemma":[0.98969334,0.0059237354,0.0016103834,0.00063643686,0.0018256443,0.00031040685],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0075070527,0.00078521983,0.00058679946,0.0014122732,0.0001686899,0.001133399,0.00090887235,0.0012488324,0.00053990044],"category_scores_gemma":[0.008346854,0.0007388579,0.00071373413,0.00061757694,0.0008151372,0.00076432916,0.0005385471,0.00063576025,0.00044286725],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005832851,0.00075656024,0.32959986,0.0008965694,0.00046702247,0.000374894,0.00071775535,0.0031046756,0.6039737,0.00032920786,0.00034368262,0.05360319],"study_design_scores_gemma":[0.00021482297,0.010848672,0.37773967,0.00013460423,0.0005025221,0.005549805,0.0004273039,0.039444007,0.5618535,0.00020719819,0.0029028205,0.00017504228],"about_ca_topic_score_codex":0.0007970455,"about_ca_topic_score_gemma":0.0014334884,"teacher_disagreement_score":0.0075070527,"about_ca_system_score_codex":0.00051856885,"about_ca_system_score_gemma":0.00033133707,"threshold_uncertainty_score":0.03970158},"labels":[],"label_agreement":null},{"id":"W2141229046","doi":"10.1080/13693780500220076","title":"Follow-up study of dogs and cats with asymptomatic<i>Cryptococcus gattii</i>infection or nasal colonization","year":2005,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; College of Veterinarians of British Columbia; Vancouver Coastal Health; University of Saskatchewan","funders":"","keywords":"Cryptococcus gattii; Colonization; Asymptomatic; CATS; Biology; Immunology; Cryptococcus; Cryptococcosis; Medicine; Microbiology; Pathology; Internal medicine","score_opus":0.016548685897306556,"score_gpt":0.30147428563038786,"score_spread":0.2849255997330813,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141229046","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9996055,0.00007404578,0.00003053471,0.000014916071,0.0000027999433,0.000008307271,0.00004477846,0.0000015791779,0.00021756896],"genre_scores_gemma":[0.99938107,0.00006142684,0.000048217702,0.00002554425,0.0000051983966,0.0000069223997,0.00021406915,0.0000011284591,0.00025629473],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996706,0.00006371295,0.000025802992,0.00006866154,0.000054097953,0.000117103256],"domain_scores_gemma":[0.99873024,0.00020553696,0.00038400528,0.000091330505,0.00023679709,0.00035209718],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005560205,0.0002683362,0.00040206168,0.00077157887,0.00092091487,0.0005266332,0.00020456153,0.00049198203,0.0007877114],"category_scores_gemma":[0.0020671112,0.00019631289,0.00029852174,0.00033175366,0.00040579596,0.0005638669,0.00045550562,0.00059586804,0.0002785287],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004270754,0.00043903347,0.9907691,0.000011009435,0.00002732095,0.0018182799,0.0009909517,0.000036608282,0.0020861547,0.000018679235,0.00014257264,0.0032333313],"study_design_scores_gemma":[0.000015773307,0.0019317971,0.99328434,0.00000890704,0.000050280334,0.0025571322,0.0007429411,0.00012060349,0.00056028366,0.000020885316,0.00069753494,0.000009467761],"about_ca_topic_score_codex":0.0060385806,"about_ca_topic_score_gemma":0.0063369065,"teacher_disagreement_score":0.0060385806,"about_ca_system_score_codex":0.0004762207,"about_ca_system_score_gemma":0.00022002531,"threshold_uncertainty_score":0.012006879},"labels":[],"label_agreement":null},{"id":"W2144201640","doi":"10.3109/13693786.2012.675629","title":"Invasive<i>Scopulariopsis brevicaulis</i>infection in an immunocompromised patient and review of prior cases caused by<i>Scopulariopsis</i>and<i>Microascus</i>species","year":2012,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":66,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Histopathology; Medicine; Lymphoma; Chemotherapy; Biology; Pathology; Surgery","score_opus":0.03605690254811977,"score_gpt":0.32969003498469784,"score_spread":0.29363313243657807,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2144201640","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0071314564,0.9895493,0.00016503176,0.00032023498,0.000119101096,0.00001207424,0.00003596372,0.000010099263,0.0026567967],"genre_scores_gemma":[0.022129895,0.97618616,0.00047839293,0.0002781102,0.00019638124,0.000009218869,0.00007111786,0.000001781768,0.0006489682],"study_design_codex":"design_other","study_design_gemma":"case_report","domain_scores_codex":[0.99984014,0.000031912885,0.000045575805,0.00002178367,0.000046998728,0.00001366466],"domain_scores_gemma":[0.9997259,0.00011381698,0.00008527856,0.000007816087,0.000045550176,0.000021559596],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023178032,0.00040699498,0.00051774475,0.0024239467,0.0002745557,0.00044935118,0.00045659658,0.00047066956,0.001312224],"category_scores_gemma":[0.0005614986,0.00015248614,0.00026066392,0.0018262898,0.0003067881,0.0005927921,0.00025551312,0.00036032803,0.00060365675],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000102862636,0.00015039898,0.012316761,0.03255959,0.00019244598,0.044322092,0.0008166028,0.0003224976,0.0056094937,0.001034581,0.019904535,0.88266826],"study_design_scores_gemma":[0.000020266334,0.0003018107,0.044297688,0.011486725,0.000588049,0.3885463,0.0014125423,0.0001941244,0.0024173702,0.0007771491,0.5498999,0.000058206253],"about_ca_topic_score_codex":0.0014731375,"about_ca_topic_score_gemma":0.0028906737,"teacher_disagreement_score":0.0024239467,"about_ca_system_score_codex":0.0001761939,"about_ca_system_score_gemma":0.00059751474,"threshold_uncertainty_score":0.0043898225},"labels":[],"label_agreement":null},{"id":"W2146903665","doi":"10.1080/13693780701759658","title":"Disseminated fungal infection in a renal transplant recipient involving<i>Macrophomina phaseolina</i>and<i>Scytalidium dimidiatum</i>: case report and review of taxonomic changes among medically important members of the Botryosphaeriaceae","year":2008,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":77,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Alberta; St. Michael's Hospital","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Macrophomina phaseolina; Biology; Fluconazole; Mycosis; Antifungal; Microbiology; Immunology; Botany","score_opus":0.00798117993772202,"score_gpt":0.23091381351037937,"score_spread":0.22293263357265736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2146903665","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97874236,0.009374775,0.0017973905,0.0011201047,0.000103847895,0.000092893286,0.00010628828,0.00010263783,0.008559791],"genre_scores_gemma":[0.99612075,0.0020141215,0.0005886552,0.00035083512,0.0001558142,0.0000072360504,0.000033529814,0.00000753894,0.00072148617],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9997619,0.000026334674,0.000025757796,0.000050416456,0.00003720136,0.00009845716],"domain_scores_gemma":[0.99946076,0.00014298315,0.00019869652,0.000025503832,0.000024631318,0.00014733196],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016167201,0.0008234972,0.0006209997,0.00084185257,0.0010414381,0.0009982887,0.00066987757,0.0018010451,0.0015323238],"category_scores_gemma":[0.00072149164,0.00059707323,0.00039343134,0.0006378842,0.000903026,0.0008798929,0.00068284676,0.0015059528,0.00052217406],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038482907,0.000024416477,0.008427859,0.000058981277,0.000009875078,0.98724306,0.00022483293,0.000030551026,0.0017839482,0.00008764405,0.00017164505,0.001898715],"study_design_scores_gemma":[0.00000576968,0.00004971795,0.006749053,0.000012100407,0.000016430631,0.9916163,0.00020418427,0.000083149374,0.00052760175,0.000039633316,0.00068952295,0.0000065775853],"about_ca_topic_score_codex":0.003757987,"about_ca_topic_score_gemma":0.0035926243,"teacher_disagreement_score":0.003757987,"about_ca_system_score_codex":0.00074823905,"about_ca_system_score_gemma":0.0005124965,"threshold_uncertainty_score":0.007472217},"labels":[],"label_agreement":null},{"id":"W2149260722","doi":"10.3109/13693786.2012.715246","title":"Characterization of an antigenic chitosanase from the cellulolytic fungus<i>Chaetomium globosum</i>","year":2012,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Indoor Air Quality and Microbial Exposure","field":"Environmental Science","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada; Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada; National Academy of Sciences","keywords":"Chaetomium globosum; Chaetomium; Antigen; Polyclonal antibodies; Microbiology; Antigenicity; Biology; Fungus; Molecular mass; Biochemistry; Chemistry; Enzyme; Botany; Aspergillus","score_opus":0.008227156815008428,"score_gpt":0.22771802588004145,"score_spread":0.219490869065033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149260722","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99506146,0.00084650086,0.0026523166,0.00010961008,0.000013987952,0.000038642163,0.00049055927,0.000013126374,0.00077375554],"genre_scores_gemma":[0.9888081,0.0007926348,0.00619393,0.000113317874,0.000014255674,0.000024483652,0.0026628117,0.000017068203,0.0013733548],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99992466,0.000010165232,0.0000070135316,0.000018906978,0.000022654342,0.000016580372],"domain_scores_gemma":[0.99980205,0.00005484254,0.000045429526,0.0000172056,0.00004269667,0.000037898575],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012125527,0.00034267266,0.00018408729,0.00024840268,0.00009604882,0.00034032456,0.00014845395,0.00027996104,0.00041704773],"category_scores_gemma":[0.0002852241,0.00006389534,0.0003164867,0.00030356902,0.00016612207,0.00014455081,0.00013306388,0.00024179534,0.00028212118],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034201945,0.00001735369,0.0007192623,0.000030516565,0.0000050979625,0.00014346003,0.000016337706,0.00003867004,0.9977222,0.000024451721,0.00001583393,0.0012325505],"study_design_scores_gemma":[0.000017772176,0.00044402108,0.05417894,0.000019281288,0.00004617033,0.0015535385,0.00014467657,0.00076810044,0.93912405,0.000080109945,0.003611782,0.000011512724],"about_ca_topic_score_codex":0.0020680951,"about_ca_topic_score_gemma":0.0012042233,"teacher_disagreement_score":0.0020680951,"about_ca_system_score_codex":0.00021139783,"about_ca_system_score_gemma":0.00024036634,"threshold_uncertainty_score":0.0041121244},"labels":[],"label_agreement":null},{"id":"W2152554511","doi":"10.1080/13693780310001644680","title":"Determination of keratin degradation by fungi using keratin azure","year":2004,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Dyeing and Modifying Textile Fibers","field":"Engineering","cited_by":81,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; University of Toronto; Brandon University; Toronto Public Health","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Keratin; Wool; Keratin 6A; Chemistry; In vitro; Degradation (telecommunications); Keratinase; Keratin 8; Biochemistry; Biology; Materials science; Intermediate filament; Cell","score_opus":0.011404389449117482,"score_gpt":0.24631318929289298,"score_spread":0.2349087998437755,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152554511","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9903713,0.001590063,0.0060162637,0.000010840258,0.0000065694207,0.000049939474,0.00028387777,0.000026726928,0.0016444656],"genre_scores_gemma":[0.9827155,0.0023193962,0.012199983,0.000015187294,0.000005988139,0.00005807334,0.0005912458,0.000014138952,0.002080473],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997254,0.00005833025,0.00002688918,0.000058383564,0.000083193954,0.000047804308],"domain_scores_gemma":[0.99969125,0.00010593235,0.000076267475,0.000025071675,0.00006778106,0.000033708453],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022141343,0.0005326467,0.00019998619,0.0005546279,0.00023899929,0.00028875232,0.00013247822,0.00023859538,0.0007192536],"category_scores_gemma":[0.00031673873,0.00016298566,0.0001976055,0.0004605778,0.00018070801,0.00025395316,0.0002588676,0.0002859661,0.00022449128],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044342214,0.000014936617,0.0011384441,0.000038989976,0.000003823112,0.00001876209,0.00003673831,0.000023777293,0.99722445,0.000012269736,0.0000030746412,0.0014405162],"study_design_scores_gemma":[0.0000037563912,0.00047455425,0.02065793,0.000012051099,0.000021612168,0.00014825571,0.00009053965,0.00021409152,0.9776834,0.000020154344,0.00066790543,0.000005822392],"about_ca_topic_score_codex":0.0009217515,"about_ca_topic_score_gemma":0.0016113105,"teacher_disagreement_score":0.0009217515,"about_ca_system_score_codex":0.000096624164,"about_ca_system_score_gemma":0.00011741305,"threshold_uncertainty_score":0.0024061203},"labels":[],"label_agreement":null},{"id":"W2152749930","doi":"10.1080/mmy.40.2.143.151","title":"<i>Chrysosporium</i>anamorph of<i>Nannizziopsis vriesii</i>associated with fatal cutaneous mycoses in the salt-water crocodile (<i>Crocodylus porosus</i>)","year":2002,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Infectious Diseases and Mycology","field":"Veterinary","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; University of Alberta","keywords":"Crocodylus; Crocodile; Hatchling; Chrysosporium; Biology; Salt water; Zoology; Veterinary medicine; Ecology; Botany; Medicine; Hatching","score_opus":0.01992025109446214,"score_gpt":0.2565903170199337,"score_spread":0.23667006592547155,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152749930","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9997435,0.00005386349,0.000020665644,0.000010566017,0.0000024319343,0.000007835996,0.000026579688,0.0000021546482,0.00013251838],"genre_scores_gemma":[0.99974304,0.000060497572,0.00003699493,0.0000109569255,0.0000044858466,0.0000030855244,0.000062081956,6.201621e-7,0.000078127894],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.9996964,0.00005515647,0.000026052234,0.000070809,0.00005889765,0.000092733],"domain_scores_gemma":[0.9993399,0.0000819149,0.00031576565,0.00003502864,0.00007074239,0.00015660975],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025890657,0.0005297798,0.00027499397,0.0007153122,0.0007392696,0.0003860529,0.00035940311,0.0005238064,0.00056493905],"category_scores_gemma":[0.0006326932,0.00040214733,0.00023985328,0.00023942874,0.0007300113,0.00022764075,0.00039293733,0.00050090946,0.00014527279],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009911977,0.0002239528,0.90705097,0.000090992544,0.000076356286,0.03521304,0.0006725854,0.00016226545,0.051481962,0.000045487013,0.0002684772,0.0037226174],"study_design_scores_gemma":[0.00001880236,0.00079456886,0.98077685,0.000008863338,0.000024362804,0.016078072,0.00039647942,0.000090165035,0.0016169209,0.000012112332,0.0001751738,0.000007608194],"about_ca_topic_score_codex":0.008963354,"about_ca_topic_score_gemma":0.014672952,"teacher_disagreement_score":0.008963354,"about_ca_system_score_codex":0.000676485,"about_ca_system_score_gemma":0.00029819517,"threshold_uncertainty_score":0.017822325},"labels":[],"label_agreement":null},{"id":"W2153340107","doi":"10.1080/mmy.40.6.573.580","title":"Arachnomyces kanei (anamorph<i>Onychocola kanei</i>) sp. nov., from human nails","year":2002,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Toronto; Sunnybrook Health Science Centre; University of Alberta","funders":"","keywords":"Biology; Ascocarp; Nail (fastener); Fungus; Phylogenetic tree; Botany; Taxonomy (biology); Genetics","score_opus":0.013150780302455183,"score_gpt":0.2386571100843697,"score_spread":0.22550632978191454,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153340107","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99546474,0.0015458369,0.0010384828,0.00008018862,0.000037613303,0.00008222963,0.0006548529,0.000015696975,0.0010804763],"genre_scores_gemma":[0.99189055,0.002471404,0.0024626236,0.000102383805,0.0000412638,0.0000454598,0.0018469967,0.000008660828,0.0011306384],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999858,0.000009980225,0.000032485033,0.000039692404,0.0000348882,0.000024780573],"domain_scores_gemma":[0.99986196,0.00002596229,0.000036712452,0.000018903609,0.000030107482,0.000026271382],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008529386,0.00042276512,0.00019329037,0.0006552584,0.00047116226,0.0005424853,0.0001460279,0.00028619275,0.00052826584],"category_scores_gemma":[0.00045488318,0.00025086297,0.00014748955,0.00045017543,0.00019639508,0.00026202737,0.0002717584,0.00022466686,0.00043868495],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00076040614,0.00025665163,0.1895974,0.0010392835,0.000060544397,0.021871084,0.002866754,0.00039925476,0.68301004,0.00018641804,0.0013693002,0.0985828],"study_design_scores_gemma":[0.00007638791,0.0011614473,0.79849595,0.00015537042,0.00020744475,0.105519965,0.0039090943,0.00051308854,0.07212901,0.00021671981,0.017562352,0.00005323493],"about_ca_topic_score_codex":0.002902952,"about_ca_topic_score_gemma":0.00428991,"teacher_disagreement_score":0.002902952,"about_ca_system_score_codex":0.00011571448,"about_ca_system_score_gemma":0.00019794983,"threshold_uncertainty_score":0.005772054},"labels":[],"label_agreement":null},{"id":"W2158411321","doi":"10.1080/13693780400005916","title":"Subcutaneous phaeohyphomycosis caused by<i>Lasiodiplodia theobromae</i>and successfully treated surgically","year":2004,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"St Joseph's Health Centre","funders":"","keywords":"Phaeohyphomycosis; Chromoblastomycosis; Lasiodiplodia theobromae; Medicine; Biopsy; Debridement (dental); Mycosis; Surgery; Biology; Pathology; Horticulture","score_opus":0.0041345780051962495,"score_gpt":0.21413829911775198,"score_spread":0.21000372111255572,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158411321","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99158466,0.0009112951,0.0009008212,0.000445264,0.00005813147,0.00006965679,0.000043699776,0.000058346024,0.0059281206],"genre_scores_gemma":[0.9964365,0.0006045617,0.00038237817,0.00015528614,0.000054872275,0.000008263626,0.000052037012,0.0000064896226,0.0022996557],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99990964,0.0000076231586,0.000006695769,0.000018390649,0.00001356088,0.000044092056],"domain_scores_gemma":[0.9998816,0.000015118961,0.000031985328,0.0000062550184,0.000008835589,0.000056186826],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000475399,0.00046369582,0.000303666,0.0003264305,0.00079951464,0.0004583511,0.00018886712,0.0005040942,0.0005565783],"category_scores_gemma":[0.00032325616,0.00022352525,0.00021579013,0.00024615962,0.00040672155,0.00023275317,0.0002671571,0.00065126666,0.00022630054],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020046676,0.00020886517,0.017691836,0.00007138231,0.0000140928805,0.9429964,0.00039795594,0.00014388714,0.02832457,0.0001851615,0.0003883951,0.00937699],"study_design_scores_gemma":[0.000098020246,0.00083895994,0.07682211,0.0000409583,0.000031736898,0.90836275,0.000661462,0.0012831258,0.007852348,0.00013876511,0.0038500014,0.000019868588],"about_ca_topic_score_codex":0.006502935,"about_ca_topic_score_gemma":0.007229789,"teacher_disagreement_score":0.006502935,"about_ca_system_score_codex":0.00048264264,"about_ca_system_score_gemma":0.00037673663,"threshold_uncertainty_score":0.012930155},"labels":[],"label_agreement":null},{"id":"W2158436147","doi":"10.1080/13693780802238834","title":"The characteristics of<i>Aspergillus fumigatus</i>mycetoma development: is this a biofilm?","year":2008,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":135,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York Central Hospital","funders":"","keywords":"Biofilm; Aspergillus fumigatus; Microbiology; Fungus; Biology; Pathogenic fungus; Population; Bacteria; Botany","score_opus":0.035197297525472564,"score_gpt":0.33636543410725206,"score_spread":0.3011681365817795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158436147","genre_codex":"empirical","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8378245,0.13481753,0.013587365,0.0037454264,0.0001949074,0.00007732176,0.0005359936,0.0002541044,0.00896289],"genre_scores_gemma":[0.9667742,0.026330318,0.0041849543,0.00037430276,0.00010389177,0.000020896172,0.00027257792,0.000018521654,0.0019203516],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99988246,0.000021847216,0.000014665191,0.0000225193,0.000031591164,0.000026859774],"domain_scores_gemma":[0.9997857,0.00004030594,0.0000773943,0.000011038321,0.00005267766,0.000032911437],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015909673,0.0002514427,0.00021082938,0.00028973015,0.00014590124,0.00046508602,0.00016736046,0.0005073064,0.0005838739],"category_scores_gemma":[0.00036319808,0.00009761454,0.00013157229,0.00015124687,0.00025639727,0.0004033081,0.00020766616,0.00030713313,0.00035274684],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001111618,0.000016050933,0.015732571,0.00051222084,0.000011359206,0.0023032797,0.00019657641,0.00008836833,0.9398673,0.00049801375,0.00057915266,0.040083975],"study_design_scores_gemma":[0.000018310535,0.0014658265,0.29795045,0.00039126954,0.00016024167,0.08631556,0.0019731664,0.0014164554,0.520443,0.0016742556,0.08811205,0.00007944803],"about_ca_topic_score_codex":0.0009150521,"about_ca_topic_score_gemma":0.0011443049,"teacher_disagreement_score":0.0009150521,"about_ca_system_score_codex":0.0002182683,"about_ca_system_score_gemma":0.00010859288,"threshold_uncertainty_score":0.0019533038},"labels":[],"label_agreement":null},{"id":"W2158943156","doi":"10.3109/13693786.2012.676739","title":"Serum galactomannan in cystic fibrosis patients colonized with<i>Aspergillus</i>species","year":2012,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Cystic Fibrosis Research Advances","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"Hospital for Sick Children","keywords":"Galactomannan; Cystic fibrosis; Aspergillus; Microbiology; Aspergillosis; Medicine; Internal medicine; Biology; Pathology; Gastroenterology; Immunology","score_opus":0.009805986905527177,"score_gpt":0.28103447054805913,"score_spread":0.27122848364253194,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158943156","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9995759,0.00015289607,0.00001684633,0.000014715717,0.0000026623795,0.0000025969136,0.000029158942,0.000002343866,0.0002029525],"genre_scores_gemma":[0.99981815,0.00005793156,0.00003425187,0.000015054724,0.000005470805,0.0000016573634,0.000034146582,6.494929e-7,0.000032700944],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998099,0.000043252825,0.000028342154,0.000033625536,0.000034070286,0.00005079852],"domain_scores_gemma":[0.9992822,0.00019059604,0.00025476393,0.000021563348,0.00005796133,0.00019280189],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021852713,0.00027528201,0.00032029705,0.00062305835,0.00041622997,0.0003646766,0.00010454288,0.00038410968,0.0010773127],"category_scores_gemma":[0.0016531621,0.00021938747,0.00014568146,0.00044372177,0.0003311785,0.0003218045,0.00020435487,0.00037093944,0.00016932079],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032476644,0.0000372481,0.99464595,0.000009682761,0.00001307752,0.00093727215,0.00016496722,0.000026831229,0.002400948,0.000010533055,0.00007008171,0.0013586966],"study_design_scores_gemma":[0.000024004159,0.0006040763,0.99229175,0.000011613167,0.000025146644,0.005536438,0.00035821888,0.00014472965,0.0007594303,0.000019708747,0.00022055887,0.0000043311557],"about_ca_topic_score_codex":0.002507669,"about_ca_topic_score_gemma":0.0018171907,"teacher_disagreement_score":0.002507669,"about_ca_system_score_codex":0.00024961444,"about_ca_system_score_gemma":0.00015377926,"threshold_uncertainty_score":0.004986167},"labels":[],"label_agreement":null},{"id":"W2160521739","doi":"10.1093/mmy/myu025","title":"Performance of MycAssay Aspergillus DNA real-time PCR assay compared with the galactomannan detection assay for the diagnosis of invasive aspergillosis from serum samples","year":2014,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier universitaire de Québec; Hôtel-Dieu de Québec; Université Laval","funders":"Pfizer","keywords":"Galactomannan; Aspergillosis; Aspergillus; Polymerase chain reaction; Gold standard (test); Biology; Real-time polymerase chain reaction; Confidence interval; Medicine; Microbiology; Gastroenterology; Internal medicine; Immunology; Gene; Biochemistry","score_opus":0.020195137273179026,"score_gpt":0.2590445015565602,"score_spread":0.2388493642833812,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2160521739","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99425876,0.001720997,0.003302304,0.00003912929,0.00003352464,0.00001559567,0.000064532614,0.000043209282,0.00052195427],"genre_scores_gemma":[0.9981249,0.00012055802,0.0015455366,0.000026869593,0.00001734732,0.000008548806,0.000067860725,0.000004219324,0.00008412944],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9964586,0.0015788779,0.00032937565,0.0008688596,0.00060966535,0.00015464552],"domain_scores_gemma":[0.990936,0.0058486573,0.0013850362,0.0006067917,0.00080254476,0.00042093388],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0034627127,0.00044560566,0.0005271698,0.0008189295,0.00012337422,0.0007994209,0.00037881066,0.00047241314,0.00054800895],"category_scores_gemma":[0.011530667,0.00028538512,0.00032594227,0.00039990386,0.00039314435,0.00051105226,0.00029584143,0.00041179644,0.00024897745],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0061576506,0.00019430651,0.90026087,0.00014393603,0.00017825825,0.000280106,0.00031702023,0.0015738559,0.04606352,0.00013041565,0.00014487069,0.044555143],"study_design_scores_gemma":[0.00025580355,0.015234797,0.82478195,0.00008443441,0.00049037265,0.007977913,0.0004352587,0.046804186,0.10190951,0.00029522178,0.0016282286,0.00010229852],"about_ca_topic_score_codex":0.0004050763,"about_ca_topic_score_gemma":0.00048636502,"teacher_disagreement_score":0.0034627127,"about_ca_system_score_codex":0.00028089975,"about_ca_system_score_gemma":0.00017778344,"threshold_uncertainty_score":0.018312812},"labels":[],"label_agreement":null},{"id":"W2164181596","doi":"10.1080/13693780600930186","title":"Successful treatment of invasive<i>Rhizopus</i>infection in a child with thalassemia","year":2006,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de Santé Publique du Québec; McGill University Health Centre; Montreal Children's Hospital","funders":"","keywords":"Rhizopus; Amphotericin B; Thalassemia; Treatment modality; Medicine; Modalities; Mucormycosis; Surgery; Biology; Internal medicine; Dermatology; Antifungal","score_opus":0.006694850665059145,"score_gpt":0.2609317496478939,"score_spread":0.25423689898283475,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2164181596","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9824536,0.0036448967,0.004998907,0.0021221926,0.00014208037,0.00017095999,0.0001460995,0.00025693912,0.00606449],"genre_scores_gemma":[0.99442947,0.002032307,0.0020730253,0.00037218744,0.0001281964,0.00004490073,0.000077897785,0.000033493132,0.0008085582],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9998078,0.00003271645,0.000021269132,0.000025870453,0.000033367578,0.000079061276],"domain_scores_gemma":[0.9996381,0.000090543464,0.00008895247,0.000019932275,0.000016569804,0.00014597685],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015306639,0.0009106038,0.00065548636,0.00044566765,0.00089833594,0.0002988512,0.00039453103,0.0013614654,0.0006385171],"category_scores_gemma":[0.0008420379,0.00033964208,0.00059042475,0.00020870472,0.00067435374,0.00035824467,0.000543814,0.0015756605,0.0002874369],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021098721,0.00036446666,0.027927442,0.0002044196,0.00003566959,0.93216276,0.0008003782,0.0005114197,0.017807601,0.00032037956,0.0011967424,0.01845778],"study_design_scores_gemma":[0.00007085911,0.0017378068,0.04582823,0.00008186685,0.000051490762,0.9424239,0.00037356708,0.000727858,0.006244454,0.00013103437,0.002297834,0.00003103841],"about_ca_topic_score_codex":0.0015461353,"about_ca_topic_score_gemma":0.0029166928,"teacher_disagreement_score":0.0015461353,"about_ca_system_score_codex":0.00031869122,"about_ca_system_score_gemma":0.00042214332,"threshold_uncertainty_score":0.0030742884},"labels":[],"label_agreement":null},{"id":"W2166474022","doi":"10.1080/13693780802210734","title":"Association between fertility and molecular sub-type of global isolates of<i>Cryptococcus gattii</i>molecular type VGII","year":2008,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Cryptococcus gattii; Biology; Cryptococcosis; Type (biology); Mating type; Microbiology; Genetics; Gene; Ecology","score_opus":0.017640535530673282,"score_gpt":0.2996524648331344,"score_spread":0.2820119293024611,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2166474022","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9994784,0.00008119937,0.0000344818,0.000007933484,0.0000011294022,0.0000034392058,0.00011110594,0.0000021253175,0.00028020155],"genre_scores_gemma":[0.99961424,0.000052311607,0.000035365672,0.000007967668,0.0000017239641,0.000002184322,0.00014305489,0.0000013165755,0.00014194583],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99978787,0.0000244193,0.000013755009,0.000053436135,0.00004434014,0.00007620403],"domain_scores_gemma":[0.99928904,0.00011497664,0.000274311,0.000045543387,0.000121287914,0.00015484862],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019542522,0.00021322822,0.00018100963,0.0005599041,0.00023954589,0.00043145995,0.00021940355,0.00023646386,0.0013488078],"category_scores_gemma":[0.0007645706,0.00016594904,0.00014716084,0.00031625322,0.00032623386,0.00009977064,0.0002492147,0.00038824795,0.00014191792],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021728728,0.000029381237,0.9660788,0.000014584799,0.00004542794,0.00023116857,0.00025544944,0.00005770612,0.030710012,0.00002651745,0.00010156921,0.0022321064],"study_design_scores_gemma":[0.0000013114469,0.00005499172,0.99886084,0.0000021444594,0.000006459097,0.00032257853,0.00017132393,0.000029716268,0.00045586954,0.000004597042,0.00008859463,0.0000014795422],"about_ca_topic_score_codex":0.016542017,"about_ca_topic_score_gemma":0.022667931,"teacher_disagreement_score":0.016542017,"about_ca_system_score_codex":0.00029322685,"about_ca_system_score_gemma":0.00018746483,"threshold_uncertainty_score":0.032891452},"labels":[],"label_agreement":null},{"id":"W2166738819","doi":"10.3109/13693786.2011.584074","title":"Disseminated sporotrichosis in a patient with hairy cell leukemia treated with amphotericin B and posaconazole","year":2012,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; McMaster University; University of Toronto","funders":"","keywords":"Sporotrichosis; Sporothrix schenckii; Posaconazole; Amphotericin B; Sporothrix; Medicine; Leukemia; Hairy cell leukemia; Malignancy; Immunology; Dermatology; Pathology; Antifungal","score_opus":0.0044801554704070445,"score_gpt":0.22409535801090802,"score_spread":0.219615202540501,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2166738819","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98547053,0.002515466,0.0014558386,0.002120936,0.00012504314,0.00012027918,0.000097902834,0.00008707318,0.008007001],"genre_scores_gemma":[0.996664,0.0010111071,0.00054155383,0.0005403376,0.00017469222,0.00001396029,0.00004121799,0.000010758253,0.0010024501],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9997712,0.000034985253,0.00002235832,0.00004616222,0.00003748058,0.0000878943],"domain_scores_gemma":[0.99933857,0.00023889031,0.00009911662,0.000029435265,0.000037165828,0.000256839],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020928538,0.00091506913,0.0007756482,0.0008747869,0.0014013936,0.00064493186,0.00042266824,0.0026785415,0.0013014363],"category_scores_gemma":[0.0014626419,0.00050921744,0.00056018913,0.00062427425,0.0009190439,0.0007484198,0.0005747111,0.0022590593,0.00033896137],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000070852795,0.000075122494,0.00925927,0.000020805212,0.000009034231,0.9868962,0.00027615958,0.00011247116,0.0011986316,0.000137322,0.00013488535,0.0018091378],"study_design_scores_gemma":[0.00005330079,0.00044088464,0.013569296,0.000017219618,0.00002639771,0.9837196,0.00019191405,0.0004771575,0.0005794908,0.00018496104,0.0007278323,0.0000118374655],"about_ca_topic_score_codex":0.0019296611,"about_ca_topic_score_gemma":0.0026958648,"teacher_disagreement_score":0.0026785415,"about_ca_system_score_codex":0.00059731683,"about_ca_system_score_gemma":0.00064312667,"threshold_uncertainty_score":0.0043537617},"labels":[],"label_agreement":null},{"id":"W2168305899","doi":"10.1080/13693780801938996","title":"An intrafamilial transmission of<i>Arthroderma benhamiae</i>in Canadian porcupines (<i>Erethizon dorsatum</i>) in a Japanese zoo","year":2008,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Bijzonder Onderzoeksfonds UGent; Ministry of Agriculture, Forestry and Fisheries; Chiba University; Ministry of Education, Culture, Sports, Science and Technology","keywords":"Porcupine; Biology; Mating type; Zoology; Veterinary medicine; Genetics; Ecology; Gene; Medicine","score_opus":0.009671307607802335,"score_gpt":0.2810453293959626,"score_spread":0.2713740217881603,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168305899","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9997129,0.000028759752,0.000030041017,0.0000059115023,7.845031e-7,0.000006745278,0.000038709666,0.0000016580615,0.00017453099],"genre_scores_gemma":[0.9995409,0.0000681805,0.00010299506,0.000009443405,0.0000010953408,0.0000034023537,0.000095006995,0.0000010114792,0.00017797189],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.9996344,0.00003018232,0.000010083274,0.000100980316,0.000082892424,0.00014142669],"domain_scores_gemma":[0.9997018,0.000020836076,0.000075089294,0.000015724805,0.000072162686,0.000114369584],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016404728,0.00049814186,0.0002454605,0.0010971925,0.0017842368,0.00040284146,0.0005287721,0.0003227745,0.000893618],"category_scores_gemma":[0.00027044798,0.00024236222,0.00020760558,0.0006188172,0.000593653,0.00011860529,0.00044550587,0.0003176487,0.00008265496],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031394794,0.00019750604,0.8863388,0.000066524764,0.00010059118,0.005910085,0.0045774765,0.00009335675,0.09379996,0.0000878209,0.00025171586,0.008262195],"study_design_scores_gemma":[0.000003455701,0.000112047775,0.99550796,0.000006589741,0.000021626227,0.0013667616,0.0015851423,0.0000637306,0.0010098476,0.0000045262864,0.0003111794,0.0000071659674],"about_ca_topic_score_codex":0.473602,"about_ca_topic_score_gemma":0.6622094,"teacher_disagreement_score":0.473602,"about_ca_system_score_codex":0.002308479,"about_ca_system_score_gemma":0.0013750081,"threshold_uncertainty_score":0.9416907},"labels":[],"label_agreement":null},{"id":"W2168415976","doi":"10.1080/13693780701549364","title":"Evaluation of microdilution and disk diffusion methods for antifungal susceptibility testing of dermatophytes","year":2007,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":84,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Sunnybrook Health Science Centre; Mediprobe Research (Canada)","funders":"","keywords":"Broth microdilution; Antifungal; Microbiology; Biology; Minimum inhibitory concentration; Antibiotics","score_opus":0.062117568380527226,"score_gpt":0.44984572066021267,"score_spread":0.38772815227968543,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168415976","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.79684365,0.033831738,0.15409383,0.0011798999,0.0011844852,0.0026330128,0.0032293487,0.001228045,0.0057761036],"genre_scores_gemma":[0.5939728,0.015843539,0.37516874,0.00050106103,0.00040588615,0.0038269951,0.0042774966,0.00022773491,0.0057758465],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9771588,0.008974004,0.002201917,0.0024401862,0.008780454,0.0004446398],"domain_scores_gemma":[0.9836211,0.007984893,0.0020585062,0.0011917813,0.00458835,0.00055524416],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.008069007,0.0020211816,0.0024915803,0.004068219,0.0005881377,0.0016457865,0.0022513375,0.0016842154,0.0011069787],"category_scores_gemma":[0.01154172,0.0008318408,0.0008417688,0.0027881796,0.0008381356,0.001210672,0.0012513931,0.001267245,0.0012517357],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017507982,0.0020337058,0.012380771,0.0012000903,0.000168232,0.0002421758,0.0009698003,0.00078062504,0.9249309,0.00040278863,0.00044241786,0.05469767],"study_design_scores_gemma":[0.00028265463,0.011659993,0.03109376,0.00024311083,0.0004894483,0.0026988653,0.000820498,0.01301718,0.92888296,0.0003817652,0.010100193,0.00032962355],"about_ca_topic_score_codex":0.001044377,"about_ca_topic_score_gemma":0.0015024472,"teacher_disagreement_score":0.008069007,"about_ca_system_score_codex":0.00054759486,"about_ca_system_score_gemma":0.00089212495,"threshold_uncertainty_score":0.04267353},"labels":[],"label_agreement":null},{"id":"W2168603069","doi":"10.3109/13693786.2010.512301","title":"Virulence in an insect model differs between mating types in<i>Aspergillus fumigatus</i>","year":2010,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Entomopathogenic Microorganisms in Pest Control","field":"Agricultural and Biological Sciences","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Galleria mellonella; Virulence; Biology; Aspergillus fumigatus; Microbiology; Mating type; Pathogen; Mating; Aspergillus; Fungi imperfecti; Zoology; Genetics; Gene","score_opus":0.015076737456675756,"score_gpt":0.24249586560986494,"score_spread":0.22741912815318918,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168603069","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99907434,0.00016313864,0.00033299517,0.000022839597,0.000004701953,0.000012514423,0.00012266925,0.000011077969,0.00025571662],"genre_scores_gemma":[0.99789655,0.00015696148,0.0011186108,0.000045491593,0.000003849452,0.00002285749,0.0003029161,0.000005845212,0.00044686906],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99969554,0.00009251686,0.000036986366,0.000060386617,0.000058541722,0.00005609045],"domain_scores_gemma":[0.9997662,0.000057567217,0.00008681695,0.000034605066,0.00001671642,0.00003817748],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002729849,0.0004402104,0.00023933292,0.00024507768,0.00022182972,0.00032560527,0.00019894853,0.00027106365,0.00045156648],"category_scores_gemma":[0.00018594737,0.00017695913,0.00030887415,0.00013895839,0.00021209131,0.0001798945,0.00024815486,0.0005658932,0.00013576447],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001824186,0.00011264827,0.0025905892,0.000022531372,0.0000086820955,0.00005302769,0.00002862474,0.00010511856,0.9961733,0.000040172028,0.000036765447,0.0006460492],"study_design_scores_gemma":[0.00006642249,0.0046949047,0.12194492,0.000016237578,0.00007050867,0.00083339814,0.00021826715,0.004415387,0.8665607,0.00012351466,0.0010237787,0.00003190976],"about_ca_topic_score_codex":0.0020684453,"about_ca_topic_score_gemma":0.003146815,"teacher_disagreement_score":0.0020684453,"about_ca_system_score_codex":0.000489725,"about_ca_system_score_gemma":0.00016582946,"threshold_uncertainty_score":0.0041128397},"labels":[],"label_agreement":null},{"id":"W2170855902","doi":"10.3109/13693786.2011.586133","title":"Adhesion and invasion of<i>Candida albicans</i>from periodontal pockets of patients with chronic periodontitis and diabetes to gingival human fibroblasts","year":2012,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Oral microbiology and periodontitis research","field":"Dentistry","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Candida albicans; Corpus albicans; Microbiology; Periodontitis; Fibroblast; Adhesion; Chronic periodontitis; Biology; Chemistry; In vitro; Medicine; Dentistry; Biochemistry","score_opus":0.00722228911878322,"score_gpt":0.25342573629899423,"score_spread":0.246203447180211,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2170855902","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992061,0.0004837038,0.000041147534,0.000012598393,0.000005250009,0.000008903396,0.00004257407,7.263819e-7,0.00019903369],"genre_scores_gemma":[0.9987166,0.00051818235,0.0002756666,0.000041330815,0.000013537417,0.000014605462,0.00017797678,0.0000010594408,0.00024104497],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997203,0.000041103624,0.000037727903,0.000057983754,0.00007603772,0.0000667906],"domain_scores_gemma":[0.999795,0.00004689368,0.00005508716,0.000016246133,0.000039747705,0.00004706142],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025913972,0.00029860428,0.0003197872,0.0003368192,0.00041466084,0.00044406828,0.00010336979,0.00028012495,0.0012517214],"category_scores_gemma":[0.00050968485,0.00015873562,0.00026868156,0.00022960872,0.00016189879,0.00016540481,0.00029803943,0.00028159397,0.00020149424],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003818138,0.0004345228,0.40702122,0.0003290562,0.000080621154,0.0035630884,0.0014938802,0.000080674836,0.56327754,0.00005491429,0.00029753984,0.019548679],"study_design_scores_gemma":[0.00009718581,0.0029330982,0.9392358,0.00006262622,0.00012303576,0.009973332,0.002972043,0.00029822212,0.04265512,0.00006587018,0.00155734,0.000026381447],"about_ca_topic_score_codex":0.0012893657,"about_ca_topic_score_gemma":0.0014697963,"teacher_disagreement_score":0.0012893657,"about_ca_system_score_codex":0.00013899073,"about_ca_system_score_gemma":0.00019058843,"threshold_uncertainty_score":0.0041874647},"labels":[],"label_agreement":null},{"id":"W2322886270","doi":"10.1093/mmy/myv026","title":"The use of biomarkers and molecular methods for the earlier diagnosis of invasive aspergillosis in immunocompromised patients","year":2015,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"","keywords":"Galactomannan; Aspergillosis; Intensive care medicine; Medicine; Molecular diagnostics; Clinical diagnosis; Diagnostic test; Diagnostic accuracy; Pathology; Immunology; Internal medicine; Bioinformatics; Biology; Pediatrics","score_opus":0.10454597329660718,"score_gpt":0.42685594389456605,"score_spread":0.32230997059795885,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2322886270","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00013365613,0.99890506,0.00010934641,0.0002471335,0.00009314902,0.0000034576628,0.000015280562,0.0000043627624,0.00048855034],"genre_scores_gemma":[0.0009781597,0.998287,0.0002594149,0.00015499991,0.00012209937,0.0000056194804,0.000024138551,0.0000010305858,0.00016756737],"study_design_codex":"design_other","study_design_gemma":"systematic_review","domain_scores_codex":[0.99958843,0.0000850796,0.00008911582,0.0000616983,0.00015297995,0.000022707105],"domain_scores_gemma":[0.9990048,0.0006039452,0.00013375733,0.000023599712,0.00020449216,0.000029483355],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00072406564,0.00066086394,0.0011867196,0.0033072806,0.0001871257,0.00086742995,0.00066387194,0.0010054269,0.0023816728],"category_scores_gemma":[0.0019205677,0.00022764814,0.00074381096,0.0019667307,0.00042680817,0.001195133,0.00048098742,0.0015540636,0.0009294855],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006272141,0.000065207765,0.00093033,0.025751112,0.00016971806,0.00033277864,0.00008515635,0.00022813877,0.0014730891,0.0018090911,0.014911643,0.954181],"study_design_scores_gemma":[0.000023910165,0.00015275304,0.006203635,0.018236296,0.00047087742,0.006718635,0.00014380316,0.00019085048,0.001399647,0.0028335676,0.9635762,0.000049852646],"about_ca_topic_score_codex":0.0009019322,"about_ca_topic_score_gemma":0.0013744786,"teacher_disagreement_score":0.0033072806,"about_ca_system_score_codex":0.0004733099,"about_ca_system_score_gemma":0.00082860846,"threshold_uncertainty_score":0.007967532},"labels":[],"label_agreement":null},{"id":"W2343776672","doi":"10.1093/mmy/myw013","title":"The ZIP family zinc transporters support the virulence of<i>Cryptococcus neoformans</i>","year":2016,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Cryptococcus neoformans; Virulence; Microbiology; Cryptococcus; Biology; Zinc; Transporter; Chemistry; Genetics; Gene","score_opus":0.011881340254261373,"score_gpt":0.2694471938768421,"score_spread":0.2575658536225807,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2343776672","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99617153,0.0005810943,0.0013263386,0.00015086948,0.0000116184165,0.00002042708,0.0005556844,0.000092400835,0.0010899889],"genre_scores_gemma":[0.99631184,0.0002489365,0.001684759,0.00004624989,0.00000389862,0.000010034476,0.00040772744,0.000010935577,0.0012755878],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999201,0.000007156236,0.000005335854,0.000015145621,0.000026367441,0.000025897107],"domain_scores_gemma":[0.99992156,0.0000052637533,0.00002818649,0.0000047162157,0.000015655145,0.000024753164],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000069369125,0.00034142603,0.00016955151,0.00015656948,0.00016069147,0.0002434268,0.00012645203,0.00024965778,0.0009074005],"category_scores_gemma":[0.00010644541,0.00007851078,0.00021034587,0.000097903525,0.00013477438,0.00014450272,0.00019540846,0.00033835584,0.00028590282],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054575234,0.000011969018,0.0007011185,0.000024877654,0.000002327878,0.00007794285,0.000007772999,0.000037850667,0.99814785,0.000048872753,0.000050010367,0.00083471724],"study_design_scores_gemma":[0.000010390109,0.00014303994,0.028493993,0.000009789913,0.0000145116555,0.00092837313,0.000076462915,0.0017235788,0.96590203,0.00007354356,0.0026180276,0.0000063091416],"about_ca_topic_score_codex":0.002880885,"about_ca_topic_score_gemma":0.0025531265,"teacher_disagreement_score":0.002880885,"about_ca_system_score_codex":0.00041334348,"about_ca_system_score_gemma":0.0002743762,"threshold_uncertainty_score":0.005728185},"labels":[],"label_agreement":null},{"id":"W2489283315","doi":"10.1093/mmy/myw052","title":"(1,3) β-D-Glucan in Bronchoalveolar Lavage of Lung Transplant Recipients for the Diagnosis of Invasive Pulmonary Aspergillosis","year":2016,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto; University Health Network; University of Alberta","funders":"Coordenação de Aperfeiçoamento de Pessoal de Nível Superior","keywords":"Bronchoalveolar lavage; Medicine; Lung transplantation; Galactomannan; Aspergillosis; Lung; Transplantation; Internal medicine; Gastroenterology; Pathology; Immunology","score_opus":0.01853701727889445,"score_gpt":0.29622720289681176,"score_spread":0.2776901856179173,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2489283315","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99833447,0.00075441523,0.00021759653,0.00006864776,0.000017677698,0.00003417906,0.00006488168,0.000015846637,0.0004922599],"genre_scores_gemma":[0.9990595,0.00027151758,0.000326912,0.00008524277,0.000012500448,0.000010719031,0.00010788909,0.000002771076,0.00012294945],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99932504,0.00019706071,0.00010337011,0.000089860914,0.00018913353,0.000095517615],"domain_scores_gemma":[0.9992386,0.00018647769,0.00016211029,0.000037795526,0.00012305468,0.0002519292],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010176009,0.00043901562,0.000541622,0.0009552799,0.00047283754,0.00082397007,0.0003067878,0.00043937005,0.0004964645],"category_scores_gemma":[0.0016370057,0.00023761127,0.0003823404,0.0006774708,0.00045444304,0.0003633406,0.00029809994,0.00058353704,0.00020854459],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006872395,0.00013521693,0.96903574,0.00004494639,0.0000380176,0.0031896746,0.00042777348,0.0000982079,0.021482442,0.000020884836,0.00018743511,0.0046524643],"study_design_scores_gemma":[0.000027648162,0.0012537927,0.9861394,0.000034894434,0.00005926246,0.0044876975,0.00062800397,0.0009400738,0.005819074,0.00002069798,0.0005770877,0.00001235061],"about_ca_topic_score_codex":0.0030306692,"about_ca_topic_score_gemma":0.005063958,"teacher_disagreement_score":0.0030306692,"about_ca_system_score_codex":0.0005110935,"about_ca_system_score_gemma":0.0005141145,"threshold_uncertainty_score":0.0060260296},"labels":[],"label_agreement":null},{"id":"W2510638355","doi":"10.1093/mmy/myw064","title":"High frequency of pathogenic<i>Aspergillus</i>species among nonsporulating moulds from respiratory tract samples","year":2016,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Maisonneuve-Rosemont; Centre Hospitalier de l’Université de Montréal; Institut National de Santé Publique du Québec","funders":"","keywords":"Microbiology; Biology; Aspergillus; Aspergillus fumigatus; Pathogenic bacteria; Respiratory tract; Aspergillus flavus; Schizophyllum commune; Respiratory system; Bacteria; Genetics; Botany","score_opus":0.02727842797031881,"score_gpt":0.2750077031827009,"score_spread":0.24772927521238208,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2510638355","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9994703,0.00011410987,0.00013768085,0.000011292375,0.00000220074,0.000010208242,0.000055810404,0.0000053211734,0.00019315476],"genre_scores_gemma":[0.99965894,0.000055121858,0.00012993619,0.000016175145,0.000004863849,0.0000039022643,0.00008154169,0.0000019526185,0.00004757102],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993407,0.00010712365,0.000106469364,0.00014785756,0.00018513526,0.000112618705],"domain_scores_gemma":[0.9991818,0.00018148244,0.00031601032,0.000067667606,0.00011993449,0.0001330441],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030690656,0.00024984873,0.0003109382,0.0005460657,0.00041323455,0.00046646487,0.00019584753,0.00031713184,0.0007678293],"category_scores_gemma":[0.0011613496,0.00018522769,0.00017584715,0.00033014643,0.0004219995,0.00024953665,0.0002728483,0.00025534118,0.00022384814],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030506865,0.00007366113,0.9426896,0.00005412398,0.000021301601,0.0028198436,0.0005100947,0.000065162814,0.04888888,0.000041908734,0.00012334918,0.0044070147],"study_design_scores_gemma":[0.000008365952,0.00048638828,0.96974003,0.00002418039,0.000039735314,0.012214712,0.00063307385,0.0002564701,0.015969593,0.000051177583,0.00056382304,0.0000125236065],"about_ca_topic_score_codex":0.0014958056,"about_ca_topic_score_gemma":0.001415843,"teacher_disagreement_score":0.0014958056,"about_ca_system_score_codex":0.00015203492,"about_ca_system_score_gemma":0.0001525404,"threshold_uncertainty_score":0.0029741526},"labels":[],"label_agreement":null},{"id":"W2512902752","doi":"10.1093/mmy/myw077","title":"<i>Aspergillus</i>arthritis: analysis of clinical manifestations, diagnosis, and treatment of 31 reported cases","year":2016,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Qatar National Research Fund; Astellas Pharma; Sick Kids Foundation; Qatar Foundation; Gilead Sciences","keywords":"Medicine; Aspergillosis; Surgery; Arthritis; Internal medicine; Itraconazole; Gastroenterology; Dermatology; Antifungal; Immunology","score_opus":0.07098487749293951,"score_gpt":0.40508913517064105,"score_spread":0.3341042576777015,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2512902752","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97535217,0.02123376,0.00056197366,0.00014846917,0.000029835819,0.00009040408,0.0004588128,0.000028087026,0.0020964504],"genre_scores_gemma":[0.9866476,0.01108091,0.0008285513,0.0001757345,0.00010538706,0.00006236276,0.00078667945,0.000009293083,0.000303424],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.9992964,0.00009329658,0.00028403383,0.00010653768,0.00012118291,0.0000985867],"domain_scores_gemma":[0.9977003,0.0005272068,0.0012909321,0.0000921162,0.00019959435,0.00018987502],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005746462,0.0005162255,0.0004604127,0.002445296,0.0005642755,0.00057812507,0.0004950775,0.00054086436,0.0011640376],"category_scores_gemma":[0.0026056676,0.00033101786,0.000582265,0.0020955557,0.00057138404,0.0006177,0.00041679837,0.0002569121,0.0005548296],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022816013,0.0001383646,0.89606005,0.0006835884,0.00015198163,0.06774224,0.0007314017,0.00018018855,0.0024363112,0.00010792765,0.0009831364,0.030556565],"study_design_scores_gemma":[0.00005368132,0.0004987206,0.67979,0.00045804627,0.00021673636,0.30781227,0.0013698367,0.00032774606,0.0017703472,0.00014709249,0.0074993894,0.00005615323],"about_ca_topic_score_codex":0.0015405223,"about_ca_topic_score_gemma":0.0013588255,"teacher_disagreement_score":0.002445296,"about_ca_system_score_codex":0.0004196229,"about_ca_system_score_gemma":0.0004978231,"threshold_uncertainty_score":0.0038941503},"labels":[],"label_agreement":null},{"id":"W2529204894","doi":"10.1093/mmy/myw086","title":"Epidemiological features of invasive mold infections among solid organ transplant recipients: PATH Alliance<sup>®</sup>registry analysis","year":2016,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"Astellas Pharma Global Development; Chimerix; Pfizer","keywords":"Interquartile range; Medicine; Epidemiology; Aspergillosis; Internal medicine; Antifungal; Surgery; Gastroenterology; Immunology; Dermatology","score_opus":0.016858152972555964,"score_gpt":0.3002671725337635,"score_spread":0.28340901956120756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2529204894","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954075,0.000085555344,0.000103759194,0.000019884237,0.0000017876573,0.000015976153,0.003989838,0.000006709308,0.0003689708],"genre_scores_gemma":[0.99442047,0.00009810566,0.0001898984,0.000017033888,0.0000053254057,0.000037369507,0.0051297126,0.0000043883865,0.00009759391],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99947065,0.00012333553,0.000121303245,0.000111908055,0.000100888225,0.000071923416],"domain_scores_gemma":[0.99749136,0.00047028766,0.0015226026,0.0001711566,0.00014965907,0.00019489646],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00086587004,0.00015673885,0.00024423792,0.001301191,0.00017534588,0.00038122103,0.00029571625,0.00023170144,0.0019798062],"category_scores_gemma":[0.0020791742,0.00020775331,0.00031005222,0.0020903014,0.00016675022,0.0006648695,0.0006206491,0.00035291052,0.00026105813],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059147933,0.00000872462,0.99906296,0.0000074991685,0.000013778278,0.000028618415,0.000014769055,0.000051437837,0.000078294855,0.0000079334695,0.00013525377,0.0005314726],"study_design_scores_gemma":[0.0000056047934,0.000053322852,0.9991155,0.0000060497687,0.000013193587,0.00027844004,0.00010912034,0.00019575222,0.000058810965,0.00000888072,0.00015309552,0.000002191681],"about_ca_topic_score_codex":0.0022007152,"about_ca_topic_score_gemma":0.0024699182,"teacher_disagreement_score":0.0022007152,"about_ca_system_score_codex":0.00020571456,"about_ca_system_score_gemma":0.0003542671,"threshold_uncertainty_score":0.0066230893},"labels":[],"label_agreement":null},{"id":"W2553977523","doi":"10.1093/mmy/myw118","title":"Successful treatment of<i>Aspergillus</i>ventriculitis through voriconazole adaptive pharmacotherapy, immunomodulation, and therapeutic monitoring of cerebrospinal fluid (1→3)-β-D-glucan","year":2016,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Sick Kids Foundation","keywords":"Ventriculitis; Voriconazole; Aspergillosis; Medicine; Pharmacotherapy; Aspergillus; Germinoma; Meningoencephalitis; Cerebrospinal fluid; Therapeutic drug monitoring; Meningitis; Immunology; Internal medicine; Pharmacology; Biology; Surgery; Drug; Microbiology; Chemotherapy","score_opus":0.05153529980488843,"score_gpt":0.3800728267645782,"score_spread":0.3285375269596898,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2553977523","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00096071855,0.9976636,0.0001558748,0.00018343731,0.00008883511,0.000005052217,0.0000088379775,0.000006492832,0.00092725945],"genre_scores_gemma":[0.0070186444,0.9918079,0.00040154884,0.00020218563,0.00016170254,0.0000075018047,0.00003079103,0.0000021021813,0.00036761636],"study_design_codex":"design_other","study_design_gemma":"case_report","domain_scores_codex":[0.99986136,0.000026864178,0.000029858127,0.000020757287,0.000045047676,0.000016006064],"domain_scores_gemma":[0.9998504,0.000059706683,0.000036933896,0.00000606613,0.000030364456,0.00001642131],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003210975,0.0004910181,0.00080919237,0.0014437352,0.00020232766,0.00055285473,0.00056659075,0.00064394914,0.0008885899],"category_scores_gemma":[0.00042790218,0.00013060929,0.00043428282,0.0007873166,0.00029800364,0.0005898308,0.00036549015,0.00092539896,0.00057766045],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008449087,0.00009811568,0.0006862793,0.011518307,0.00012914257,0.0019471021,0.00006336878,0.00020787062,0.0040256423,0.0012015344,0.0073387832,0.97269934],"study_design_scores_gemma":[0.00007560567,0.0005123389,0.008327395,0.007585104,0.00044278175,0.046765584,0.00021795677,0.00028860927,0.0060490943,0.0020573875,0.92762476,0.000053410207],"about_ca_topic_score_codex":0.000417798,"about_ca_topic_score_gemma":0.00093442074,"teacher_disagreement_score":0.0014437352,"about_ca_system_score_codex":0.00022965424,"about_ca_system_score_gemma":0.00067878276,"threshold_uncertainty_score":0.0029726028},"labels":[],"label_agreement":null},{"id":"W2555121231","doi":"10.1093/mmy/myw117","title":"<i>Aspergillus</i>in chronic lung disease: Modeling what goes on in the airways","year":2016,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Cystic Fibrosis Foundation","keywords":"Allergic bronchopulmonary aspergillosis; Aspergillus; Immunology; Asthma; Aspergillus fumigatus; Aspergillosis; Chronic bronchitis; Medicine; Lung; Disease; Pathogen; Sensitization; Biology; Intensive care medicine; Microbiology; Pathology; Immunoglobulin E; Internal medicine","score_opus":0.045410341967157285,"score_gpt":0.38583172151525047,"score_spread":0.3404213795480932,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2555121231","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00022363842,0.99777704,0.0002265268,0.00038872685,0.00020901828,0.0000060059037,0.000016685659,0.0000058550168,0.0011466317],"genre_scores_gemma":[0.0012788828,0.99750745,0.00032774103,0.00019248866,0.00016076695,0.000005119796,0.000024213641,0.0000016246033,0.0005017911],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998343,0.000038526825,0.00002672052,0.000023828701,0.00006303181,0.000013561203],"domain_scores_gemma":[0.99972683,0.00013334335,0.000040179377,0.000010511187,0.00006430991,0.000024777533],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005374454,0.0005118423,0.0009223502,0.0015017213,0.00018676028,0.00096191873,0.0005952876,0.0010276047,0.0019791657],"category_scores_gemma":[0.0005543161,0.00016824543,0.0005325205,0.0011337688,0.00042513903,0.0012195191,0.0005081875,0.001393154,0.0012719696],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000796598,0.00008022183,0.00059321936,0.025901528,0.0001225212,0.00033911658,0.00015195041,0.0006197085,0.00606169,0.009226663,0.025534447,0.9312892],"study_design_scores_gemma":[0.000008955088,0.0001395672,0.0010851044,0.005378731,0.0001277088,0.0022937576,0.00010561542,0.00021116005,0.0013300937,0.0032462438,0.9860529,0.000020334572],"about_ca_topic_score_codex":0.001008432,"about_ca_topic_score_gemma":0.001746771,"teacher_disagreement_score":0.0019791657,"about_ca_system_score_codex":0.00037305674,"about_ca_system_score_gemma":0.000822783,"threshold_uncertainty_score":0.006621003},"labels":[],"label_agreement":null},{"id":"W2563759234","doi":"10.1093/mmy/myw134","title":"7th Advances Against Aspergillosis: Basic, diagnostic, clinical and therapeutic studies","year":2016,"lang":"en","type":"editorial","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Aspergillosis; Intensive care medicine; Medicine; Immunology","score_opus":0.027451568921902838,"score_gpt":0.40631536627616127,"score_spread":0.37886379735425846,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2563759234","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00003424515,0.04284427,0.00011683833,0.019731218,0.9360583,0.00000868583,0.000020603256,0.000022884333,0.0011630044],"genre_scores_gemma":[0.00025953524,0.02443102,0.00012841176,0.01328982,0.95878726,0.000009436214,0.000014928071,0.0000121520725,0.0030674485],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9955258,0.000841184,0.0007809839,0.0004030737,0.0021005017,0.00034854488],"domain_scores_gemma":[0.98616076,0.006174505,0.00093964644,0.0004878161,0.004804637,0.0014325731],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0073136785,0.0031998907,0.0034759555,0.0029391747,0.0019646157,0.006128596,0.0032157197,0.0109233465,0.006400093],"category_scores_gemma":[0.01416657,0.00088034366,0.0028754252,0.0011980056,0.0027323996,0.0038487036,0.001841792,0.018146895,0.0061764917],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010095705,0.000043460936,0.000053962398,0.0011192492,0.000058275025,0.0002217331,0.000018930466,0.000043025815,0.00022772813,0.00092261884,0.9711122,0.026077775],"study_design_scores_gemma":[0.00005406608,0.000055250126,0.00022707359,0.00081629015,0.00009537885,0.00034812852,0.00002641517,0.00008336309,0.0001538822,0.0013636283,0.9967614,0.000015227249],"about_ca_topic_score_codex":0.000817132,"about_ca_topic_score_gemma":0.0036868982,"teacher_disagreement_score":0.0109233465,"about_ca_system_score_codex":0.0025065397,"about_ca_system_score_gemma":0.0023969258,"threshold_uncertainty_score":0.038678944},"labels":[],"label_agreement":null},{"id":"W2606196206","doi":"10.1093/mmy/myx017","title":"Diabetes mellitus as the major risk factor for mucormycosis in Mexico: Epidemiology, diagnosis, and outcomes of reported cases","year":2017,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":197,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Universidad Nacional Autónoma de México; Sick Kids Foundation; Wellcome Trust","keywords":"Mucormycosis; Epidemiology; Diabetes mellitus; Risk factor; Medicine; Intensive care medicine; Internal medicine; Surgery; Endocrinology","score_opus":0.060352455069831654,"score_gpt":0.3849286850694249,"score_spread":0.32457622999959324,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2606196206","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8782721,0.11303933,0.00033347416,0.0010028755,0.00006271808,0.0001228832,0.004763002,0.000022944525,0.0023806712],"genre_scores_gemma":[0.94838035,0.04673781,0.0006422403,0.00019086429,0.00012399965,0.000113757655,0.0035854508,0.0000041939334,0.00022130068],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9995895,0.000074918345,0.00012298617,0.00008429749,0.00007284001,0.000055529614],"domain_scores_gemma":[0.9986218,0.00028560025,0.00086334,0.00003089658,0.00012128301,0.0000770544],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007982586,0.00022322494,0.0004230471,0.002949396,0.00041887013,0.00060687686,0.0003668572,0.00035863777,0.0013945146],"category_scores_gemma":[0.0022092778,0.00015800896,0.00045399685,0.0038964548,0.00016487842,0.00051417993,0.00032413227,0.0002490121,0.00008539804],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018517577,0.000045531302,0.97554463,0.0016176839,0.0001982537,0.00119799,0.00019763623,0.00003167751,0.00021648682,0.00007260825,0.0010961915,0.01959618],"study_design_scores_gemma":[0.000019331274,0.00008636058,0.9904993,0.0012880384,0.0003551995,0.0040382156,0.0008604797,0.00010287516,0.00007417611,0.00005867287,0.0026076857,0.000009680771],"about_ca_topic_score_codex":0.00918692,"about_ca_topic_score_gemma":0.008404385,"teacher_disagreement_score":0.00918692,"about_ca_system_score_codex":0.00047421985,"about_ca_system_score_gemma":0.0006989547,"threshold_uncertainty_score":0.018266916},"labels":[],"label_agreement":null},{"id":"W2614920772","doi":"10.1093/mmy/myx037","title":"Searching for clues for eighteen years: Deciphering the ecological determinants of Cryptococcus gattii on Vancouver Island, British Columbia","year":2017,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Centre for Disease Control; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; British Columbia Lung Association","keywords":"Cryptococcus gattii; Ecology; Geography; Ecological niche; Climate change; Temperate rainforest; Temperate climate; Environmental niche modelling; Niche; Habitat; Cryptococcosis; Biology; Ecosystem","score_opus":0.11382199623170366,"score_gpt":0.42936570174594685,"score_spread":0.31554370551424316,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2614920772","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17287558,0.7989434,0.00044723597,0.008610918,0.0003622525,0.00018311657,0.0039413427,0.000016902897,0.014619181],"genre_scores_gemma":[0.3897198,0.6012267,0.0013603657,0.003308082,0.00015007926,0.00011079974,0.001865705,0.000017693636,0.0022407526],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987602,0.00020523384,0.00023144594,0.00016125834,0.00042559436,0.00021624404],"domain_scores_gemma":[0.99241734,0.0018514581,0.0013148941,0.00010978834,0.0038427988,0.0004637964],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015713702,0.00038350068,0.0007721897,0.005911523,0.0018706707,0.0025001017,0.000901891,0.0006228093,0.002181783],"category_scores_gemma":[0.008039045,0.00035941973,0.00061742275,0.010641346,0.0012621352,0.0010641493,0.0008525622,0.00082117494,0.00020623225],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034563144,0.00007368279,0.42028403,0.09303261,0.0013022094,0.0059883925,0.022277541,0.00044375873,0.0031986146,0.002276619,0.028755497,0.42202136],"study_design_scores_gemma":[0.00003283222,0.000095405936,0.76882833,0.0694109,0.0020176936,0.0019494625,0.02974007,0.00020853504,0.0006979732,0.00069354346,0.12619738,0.00012785709],"about_ca_topic_score_codex":0.9217706,"about_ca_topic_score_gemma":0.974515,"teacher_disagreement_score":0.07822943,"about_ca_system_score_codex":0.0119215585,"about_ca_system_score_gemma":0.043505087,"threshold_uncertainty_score":0.15738022},"labels":[],"label_agreement":null},{"id":"W2615907117","doi":"10.1111/j.1365-280x.1998.00129.x","title":"Increased incidence of Trichophyton tonsurans tinea capitis in Ontario, Canada between 1985 and 1996","year":2008,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Ministry of Health and Long Term Care; University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Trichophyton tonsurans; Tinea capitis; Microsporum canis; Medicine; Incidence (geometry); Dermatology; Trichophyton; Microsporum; Dermatophyte; Antifungal","score_opus":0.01141658485908501,"score_gpt":0.24071928460397865,"score_spread":0.22930269974489365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2615907117","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9742284,0.0036864595,0.00018585111,0.0013262662,0.00008306942,0.00010392684,0.007209781,0.000057064637,0.013119255],"genre_scores_gemma":[0.99113524,0.0019762334,0.00022215079,0.00024749883,0.000023510469,0.000018614033,0.0015240117,0.000009362973,0.004843311],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988237,0.00004099187,0.0000567163,0.000106428095,0.0006656604,0.00030643382],"domain_scores_gemma":[0.9979183,0.00005518853,0.00055600516,0.0000346089,0.0009060397,0.0005298395],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033777585,0.00030037743,0.00031420213,0.0018849578,0.0021842343,0.0012340912,0.00091297424,0.00044988544,0.0027710777],"category_scores_gemma":[0.0015391485,0.00037742432,0.00037509983,0.004084953,0.00056125264,0.00033892322,0.000608487,0.00058476336,0.00025762542],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013600233,0.000034918194,0.9786815,0.00009216368,0.00004588273,0.0010369641,0.0010729125,0.00017278615,0.00089223305,0.00014141694,0.003494718,0.014198493],"study_design_scores_gemma":[0.0000070998367,0.000018200195,0.99606484,0.000031756295,0.000012196493,0.0003424882,0.0006121256,0.0001133805,0.00009428662,0.000009603825,0.002686172,0.000007917404],"about_ca_topic_score_codex":0.99437404,"about_ca_topic_score_gemma":0.99717796,"teacher_disagreement_score":0.03109525,"about_ca_system_score_codex":0.03109525,"about_ca_system_score_gemma":0.025500726,"threshold_uncertainty_score":0.22561288},"labels":[],"label_agreement":null},{"id":"W2753143907","doi":"10.1093/mmy/myx065","title":"Attempted molecular detection of the thermally dimorphic human fungal pathogen Emergomyces africanus in terrestrial small mammals in South Africa","year":2017,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Biology; Fungus; Insectivore; Zoology; Sexual dimorphism; Dimorphic fungus; Pathogen; Botany; Ecology; Microbiology; Genetics; Yeast; Predation","score_opus":0.034799319930480896,"score_gpt":0.2832368830041,"score_spread":0.24843756307361908,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2753143907","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99913496,0.00026232624,0.00018872428,0.000011772757,0.0000020288367,0.00001273768,0.00005638918,0.0000012718081,0.00032977943],"genre_scores_gemma":[0.9989864,0.00027281255,0.00055113144,0.000021465883,0.0000033603883,0.0000076962315,0.00006741119,6.927784e-7,0.000088942215],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99968684,0.000091420596,0.000025986774,0.000075808406,0.000058436905,0.00006157821],"domain_scores_gemma":[0.9995833,0.000118545504,0.00017700899,0.000026311043,0.000049318955,0.000045558714],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035753567,0.0002638109,0.00017791911,0.0011199419,0.0005208741,0.00043799425,0.00022453151,0.0003957081,0.00063640496],"category_scores_gemma":[0.0008278314,0.00022332862,0.00009557436,0.0005048595,0.0006167617,0.00032524634,0.00033855814,0.0001747415,0.000102521335],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017411065,0.000050761566,0.8766683,0.000111830035,0.000030856463,0.0014822555,0.0014511719,0.000060881237,0.11169858,0.000091082155,0.00004509345,0.008135165],"study_design_scores_gemma":[0.000008063422,0.0002793429,0.98019433,0.000062006235,0.00003701499,0.004556942,0.0024097762,0.00016772606,0.010832866,0.00007854943,0.001366979,0.0000063228745],"about_ca_topic_score_codex":0.0017739867,"about_ca_topic_score_gemma":0.002516737,"teacher_disagreement_score":0.0017739867,"about_ca_system_score_codex":0.00013234034,"about_ca_system_score_gemma":0.00015778313,"threshold_uncertainty_score":0.0035274029},"labels":[],"label_agreement":null},{"id":"W2761770213","doi":"10.1093/mmy/myx073","title":"The mitochondrial ABC transporter Atm1 plays a role in iron metabolism and virulence in the human fungal pathogen Cryptococcus neoformans","year":2017,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; Northeastern University; National Research Foundation of Korea; National Natural Science Foundation of China; Ministry of Science, ICT and Future Planning; National Research Foundation","keywords":"Cryptococcus neoformans; Biology; Virulence; Saccharomyces cerevisiae; Mutant; Mitochondrion; Biochemistry; ATP-binding cassette transporter; Microbiology; Fungal protein; Yeast; Cytosol; Transporter; Enzyme; Gene","score_opus":0.012818662457000455,"score_gpt":0.29366077396046925,"score_spread":0.28084211150346877,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2761770213","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99699175,0.001467421,0.0007128348,0.00016160685,0.000009246911,0.0000068131158,0.00012203565,0.000020891304,0.0005072981],"genre_scores_gemma":[0.99803776,0.0005194589,0.0005514636,0.000025418532,0.000002869537,0.0000030579379,0.00011395827,0.0000024812987,0.00074354897],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99995124,0.0000071088366,0.0000043616246,0.000010238003,0.000014227948,0.000012761808],"domain_scores_gemma":[0.9999527,0.000004635632,0.000017299648,0.0000031005618,0.000007720783,0.0000145908725],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009145545,0.00023630405,0.000141062,0.00021690733,0.00019887324,0.00022598705,0.00010338704,0.00021747722,0.0009484921],"category_scores_gemma":[0.0000930812,0.00007368059,0.00015715024,0.00014160323,0.00015589359,0.00014030568,0.00015123577,0.00023362382,0.0001906075],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022818876,0.00004778965,0.004339646,0.00006411951,0.0000065207396,0.00034734537,0.000029994202,0.000109408924,0.98876685,0.0002256303,0.000087568966,0.0057468577],"study_design_scores_gemma":[0.000040394792,0.000403724,0.11208255,0.000044193384,0.00007852213,0.0047686365,0.000278907,0.00331692,0.87096727,0.00041345376,0.007586628,0.000018884673],"about_ca_topic_score_codex":0.001518636,"about_ca_topic_score_gemma":0.00094976486,"teacher_disagreement_score":0.001518636,"about_ca_system_score_codex":0.00033202293,"about_ca_system_score_gemma":0.00022800655,"threshold_uncertainty_score":0.0031729937},"labels":[],"label_agreement":null},{"id":"W2764047600","doi":"10.1093/mmy/myx081","title":"Transcriptional profile of the human skin pathogenic fungus Mucor irregularis in response to low oxygen","year":2017,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Key Research and Development Program of China; National Natural Science Foundation of China","keywords":"Biology; Rhizophagus irregularis; Transcriptome; Microbiology; Fungal protein; Mucor; Cell biology; Gene expression; Gene; Biochemistry; Genetics; Symbiosis; Aspergillus","score_opus":0.00944288361844319,"score_gpt":0.27307653491255385,"score_spread":0.26363365129411065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2764047600","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99153113,0.002097541,0.0008736184,0.00016882828,0.00004191049,0.000032153537,0.0040160203,0.000058044134,0.0011807078],"genre_scores_gemma":[0.9905641,0.0011554417,0.0010212717,0.00027374693,0.000033617907,0.000074624586,0.0047974875,0.000026018297,0.0020537167],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997638,0.000018654553,0.000013730954,0.00009246848,0.00005749674,0.000053904096],"domain_scores_gemma":[0.9998797,0.000020117659,0.000031972762,0.000008029145,0.000040988274,0.000019174558],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010867212,0.00021479555,0.00051609764,0.0003433779,0.0003074334,0.00042306387,0.00009440543,0.00027936164,0.0007637201],"category_scores_gemma":[0.00025299977,0.00013616195,0.00037247344,0.00053363765,0.00017644878,0.00020315366,0.00027096493,0.00038949633,0.00028953355],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052664545,0.000047201058,0.01325892,0.00016598396,0.000020039512,0.00014534872,0.00023762141,0.00017283947,0.98024654,0.000043636654,0.00030649165,0.004828691],"study_design_scores_gemma":[0.000042363958,0.0008421613,0.75618005,0.00008115133,0.00019256344,0.0008307803,0.0020004355,0.0042724553,0.22729991,0.00034815472,0.00784886,0.00006098781],"about_ca_topic_score_codex":0.0018257222,"about_ca_topic_score_gemma":0.0014177355,"teacher_disagreement_score":0.0018257222,"about_ca_system_score_codex":0.00018901235,"about_ca_system_score_gemma":0.00018338599,"threshold_uncertainty_score":0.003630221},"labels":[],"label_agreement":null},{"id":"W2764214344","doi":"10.1093/mmy/myx082","title":"Deletion of Aspergillus nidulans GDP-mannose transporters affects hyphal morphometry, cell wall architecture, spore surface character, cell adhesion, and biofilm formation","year":2017,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Microbiology; Aspergillus nidulans; Biofilm; Biology; Aspergillus fumigatus; Echinocandins; Cell wall; Mannose; Antifungal drug; Cell biology; Candida albicans; Biochemistry; Bacteria; Amphotericin B; Mutant","score_opus":0.012009083041003739,"score_gpt":0.26083909284759205,"score_spread":0.24883000980658831,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2764214344","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997707,0.00033096134,0.000982438,0.00003319499,0.0000088115485,0.000012459666,0.0003241257,0.00003053077,0.0005704783],"genre_scores_gemma":[0.99587375,0.00033880098,0.0018076227,0.000026185466,0.0000024346452,0.000015537562,0.0004984162,0.000015916372,0.0014212773],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986684,0.000019014156,0.000024686251,0.000022977705,0.000043680066,0.00002282674],"domain_scores_gemma":[0.99989676,0.0000176711,0.00003302845,0.000012951765,0.00000954914,0.000030035713],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007157583,0.00029877256,0.00013141644,0.00014735236,0.000087163804,0.00019824145,0.00020954777,0.00018027124,0.0005532958],"category_scores_gemma":[0.000082917766,0.000114097355,0.0001772163,0.00012645312,0.00015045518,0.00012112353,0.0002065418,0.00036089835,0.00015193665],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000482826,0.000021448499,0.00020348547,0.000008416809,0.0000026520102,0.00004560106,0.0000067612327,0.000028816454,0.99909174,0.000026947379,0.0000091314205,0.00050685287],"study_design_scores_gemma":[0.00001167096,0.00022829685,0.018205056,0.000006724681,0.000015781352,0.00051245326,0.00006650416,0.0012620954,0.97831285,0.000047939448,0.0013244563,0.000006262726],"about_ca_topic_score_codex":0.0015393295,"about_ca_topic_score_gemma":0.0015901044,"teacher_disagreement_score":0.0015393295,"about_ca_system_score_codex":0.0001799566,"about_ca_system_score_gemma":0.00015508171,"threshold_uncertainty_score":0.003060758},"labels":[],"label_agreement":null},{"id":"W2766298573","doi":"10.1093/mmy/myx090","title":"Overexpression of Aspergillus nidulans α-1,3-glucan synthase increases cellular adhesion and causes cell wall defects","year":2017,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Aspergillus fumigatus; Aspergillus nidulans; Biofilm; Hypha; Microbiology; Adhesion; Glucan; Cell adhesion; Pathogenesis; Phenotype; Biology; Cell biology; Strain (injury); Cell wall; Chemistry; Cell; Bacteria; Gene; Biochemistry; Immunology; Genetics; Anatomy","score_opus":0.015576931294438235,"score_gpt":0.28811494246148206,"score_spread":0.27253801116704385,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2766298573","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977658,0.0002801424,0.0011860619,0.00004255919,0.000010620424,0.000010153757,0.00017909477,0.00003540631,0.0004902678],"genre_scores_gemma":[0.99713373,0.00019445237,0.0013259444,0.000026317446,0.0000021080366,0.000010381822,0.00030593722,0.000009335797,0.0009916952],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988127,0.000019103512,0.000020914042,0.000022468796,0.000035065834,0.000021236543],"domain_scores_gemma":[0.99990475,0.00001956254,0.000026532458,0.000012254609,0.000007654008,0.00002916923],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000100089484,0.0003392832,0.0001308071,0.00017220402,0.00008281844,0.00023172994,0.00012163696,0.0001514495,0.0005320122],"category_scores_gemma":[0.000095250914,0.00013129582,0.00017725296,0.00015496538,0.00017374498,0.00011024916,0.00023591572,0.00032974442,0.00018331308],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016896585,0.000010795041,0.00015862969,0.0000053203526,0.0000015907052,0.00002647893,0.0000028667475,0.00001691203,0.9995029,0.000020920546,0.0000074744617,0.00022927487],"study_design_scores_gemma":[0.000008553523,0.00009276428,0.008982248,0.0000048651796,0.000009832209,0.0003143969,0.00003484531,0.00088242884,0.9889109,0.00004152634,0.000714523,0.0000031146299],"about_ca_topic_score_codex":0.0009683467,"about_ca_topic_score_gemma":0.0013314417,"teacher_disagreement_score":0.0009683467,"about_ca_system_score_codex":0.00025542933,"about_ca_system_score_gemma":0.00016851065,"threshold_uncertainty_score":0.0019254088},"labels":[],"label_agreement":null},{"id":"W2789020304","doi":"10.1093/mmy/myx006","title":"OUP accepted manuscript","year":2017,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"European Social Fund; Astellas Pharma Global Development; Astellas Pharma; European Society for Paediatric Infectious Diseases; Sick Kids Foundation; General Secretariat for Research and Technology","keywords":"Biology","score_opus":0.03768667728001352,"score_gpt":0.3640411717592894,"score_spread":0.3263544944792759,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2789020304","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0027389468,0.0069493996,0.004177132,0.0069737155,0.018442882,0.00042106948,0.009120068,0.0046385718,0.9465382],"genre_scores_gemma":[0.0071180905,0.0027281693,0.0017152546,0.0018070971,0.0017783768,0.0001128082,0.005511527,0.0012299299,0.97799873],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983198,0.00026446115,0.00012217723,0.0004914574,0.0005161584,0.00028589423],"domain_scores_gemma":[0.9982198,0.00020526172,0.00010611227,0.0003990265,0.0005983041,0.0004714662],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0014914271,0.0014721832,0.0014564743,0.002217476,0.0018153966,0.008820055,0.0022810684,0.004552013,0.8351637],"category_scores_gemma":[0.0041247713,0.0007993844,0.0011987101,0.0016189319,0.0011826729,0.0026844903,0.004835654,0.0029785451,0.7956982],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00061288493,0.0003338271,0.0012327333,0.0015656347,0.000077981975,0.0011999514,0.00020571591,0.00027798954,0.0061407615,0.012906825,0.6627632,0.31268245],"study_design_scores_gemma":[0.000031483745,0.000038084512,0.00043428823,0.00011018847,0.0000058276914,0.00024294706,0.00004366636,0.000080147685,0.0006233625,0.00088629575,0.9974962,0.0000075090966],"about_ca_topic_score_codex":0.0015421264,"about_ca_topic_score_gemma":0.0018971711,"teacher_disagreement_score":0.16483629,"about_ca_system_score_codex":0.0012691596,"about_ca_system_score_gemma":0.0021656281,"threshold_uncertainty_score":0.23511887},"labels":[],"label_agreement":null},{"id":"W2791128600","doi":"10.1093/mmy/myx157","title":"The effect of melatonin on antifungal susceptibility in planktonic and biofilm forms of<i>Candida</i>strains isolated from clinical samples","year":2017,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Biofilm; Fluconazole; Microbiology; Melatonin; Broth microdilution; Antifungal; Biology; Minimum inhibitory concentration; Antibiotics; Bacteria","score_opus":0.021938901195255614,"score_gpt":0.351278666696469,"score_spread":0.3293397655012134,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791128600","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99396646,0.004940592,0.00015224407,0.00012886563,0.000061724364,0.000024091543,0.000109119,0.000009443637,0.0006074111],"genre_scores_gemma":[0.9966757,0.0016470817,0.0007415756,0.00007241025,0.000042824355,0.00002140404,0.000113456306,0.0000039186584,0.0006817582],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997162,0.000096527976,0.000039858904,0.000042202137,0.00006517409,0.000039982784],"domain_scores_gemma":[0.99957126,0.00014059962,0.00008897477,0.000035971414,0.00009322982,0.00006993094],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029269396,0.00025322736,0.00033064536,0.00025922447,0.00021263458,0.00026220808,0.0001272625,0.00026438502,0.00094953453],"category_scores_gemma":[0.0007894258,0.00011321549,0.00034835312,0.0001550965,0.0001879117,0.00022123978,0.00016423165,0.0003676118,0.00014108044],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026524083,0.00035030008,0.0076364265,0.00028236772,0.00005297185,0.00020562485,0.0001661915,0.000059743936,0.9746483,0.000025587851,0.00011511969,0.013804907],"study_design_scores_gemma":[0.00019457279,0.023950435,0.22283317,0.00007497029,0.00031912595,0.0007268175,0.00058205624,0.00061595085,0.7462833,0.00006835666,0.0043134815,0.000037773832],"about_ca_topic_score_codex":0.0009826312,"about_ca_topic_score_gemma":0.0015151795,"teacher_disagreement_score":0.0009826312,"about_ca_system_score_codex":0.00012786289,"about_ca_system_score_gemma":0.00021891105,"threshold_uncertainty_score":0.0031765103},"labels":[],"label_agreement":null},{"id":"W2884790029","doi":"10.1111/j.1365-280x.1999.00192.x","title":"Comment on the correspondence between Dr J. Guarro and Dr C. Rajendran in Medical Mycology 1998; 36: 349-50","year":2008,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Health and Long Term Care; University of Alberta","funders":"","keywords":"Herbarium; Devonian; Library science; Christian ministry; Archaeology; Geography; Political science; Law; Geology; Biology; Ecology; Paleontology; Computer science","score_opus":0.018769549295127627,"score_gpt":0.26752699374741656,"score_spread":0.24875744445228892,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2884790029","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00026601466,0.0011802376,0.00011123246,0.95735437,0.039537564,0.000011162069,0.00006235317,0.000056316992,0.0014208524],"genre_scores_gemma":[0.0029821096,0.0011112287,0.00020808971,0.9545833,0.035312768,0.00002685719,0.00003670939,0.000044159748,0.0056947763],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976261,0.00047304624,0.0003735249,0.00042168907,0.0008469584,0.0002585834],"domain_scores_gemma":[0.98718005,0.006766079,0.0009657987,0.00047734648,0.0031465038,0.0014642031],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0037143219,0.0009830451,0.0014650486,0.0009931887,0.0024182147,0.0020438859,0.0031756489,0.032495078,0.014957353],"category_scores_gemma":[0.02681758,0.0008342679,0.001309176,0.0010484823,0.0028613992,0.0042652404,0.0015680986,0.037082735,0.015219964],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050306615,0.000012368712,0.00024830623,0.00005239928,0.000008506788,0.0008825168,0.000075450575,0.000019844152,0.00012000779,0.00075827725,0.99487126,0.0029006957],"study_design_scores_gemma":[0.00008016145,0.00007915482,0.0016830813,0.00023373732,0.00002734539,0.003334607,0.00043000508,0.00019291983,0.0005223057,0.0030460523,0.990303,0.00006771161],"about_ca_topic_score_codex":0.0057062753,"about_ca_topic_score_gemma":0.007072028,"teacher_disagreement_score":0.032495078,"about_ca_system_score_codex":0.0027635098,"about_ca_system_score_gemma":0.0021786129,"threshold_uncertainty_score":0.050037265},"labels":[],"label_agreement":null},{"id":"W2901481860","doi":"10.1111/j.1365-280x.1999.00183.x","title":"Exophiala (Wangiella) dermatitidis keratitis after keratoplasty","year":2008,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Ocular Infections and Treatments","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotel Dieu Hospital","funders":"","keywords":"Keratitis; Microbiology; Medicine; Dermatology; Biology","score_opus":0.008583304273574557,"score_gpt":0.2470628753490031,"score_spread":0.23847957107542853,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2901481860","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9840262,0.0034162228,0.001682905,0.0006627841,0.00008999908,0.000050198392,0.000073297946,0.00009291983,0.009905435],"genre_scores_gemma":[0.9969568,0.0007017339,0.0003029485,0.00034210368,0.00010018575,0.000006307627,0.000040693638,0.000009848978,0.0015394386],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9997123,0.000032327483,0.00002367876,0.000055985947,0.000040083956,0.00013566022],"domain_scores_gemma":[0.9993631,0.0001989158,0.00018639743,0.00006488693,0.00005523661,0.00013141816],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020823562,0.00063430564,0.00038151356,0.00056501443,0.001032414,0.00084146246,0.00030549016,0.0013110489,0.0032426899],"category_scores_gemma":[0.0011525297,0.00024280815,0.0005804166,0.00031648605,0.0006775761,0.0005252954,0.0005285202,0.0008930235,0.0005617314],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015729497,0.00010328621,0.06505645,0.00009364482,0.000039512004,0.9129933,0.0008694536,0.000106254636,0.008599456,0.0003860238,0.0005845137,0.011010768],"study_design_scores_gemma":[0.000025310444,0.0002624342,0.040879093,0.000022035774,0.000032465425,0.95343345,0.00025183326,0.00018697909,0.0020099743,0.00007256063,0.0028068125,0.00001699613],"about_ca_topic_score_codex":0.005070163,"about_ca_topic_score_gemma":0.005096667,"teacher_disagreement_score":0.005070163,"about_ca_system_score_codex":0.00072039367,"about_ca_system_score_gemma":0.00053781207,"threshold_uncertainty_score":0.010847926},"labels":[],"label_agreement":null},{"id":"W2904374704","doi":"10.1093/mmy/myy133","title":"Yeast-like filamentous fungi: Molecular identification and in vitro susceptibility study","year":2018,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Hospital Foundation","funders":"Shandong Academy of Sciences; Astellas Pharma; Pfizer","keywords":"Posaconazole; Biology; Microbiology; Voriconazole; Itraconazole; Echinocandin; Echinocandins; Flucytosine; Geotrichum; Minimum inhibitory concentration; Yeast; Fungemia; Amphotericin B; Antifungal; Fluconazole; Caspofungin; Antimicrobial; Genetics","score_opus":0.013102844367873146,"score_gpt":0.31063171925389577,"score_spread":0.29752887488602264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2904374704","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99684143,0.0008058217,0.00024814272,0.00004905167,0.00001679483,0.00007845202,0.0010427835,0.000007492412,0.0009100937],"genre_scores_gemma":[0.9944764,0.0008833674,0.0012062221,0.000066562774,0.000041110732,0.000051746636,0.002610689,0.0000036668407,0.0006603449],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99968493,0.00004572283,0.000048513954,0.0000649199,0.0000819213,0.00007402379],"domain_scores_gemma":[0.99970776,0.000055850876,0.000081902945,0.000019897443,0.00008370684,0.000050949213],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023064455,0.00046895107,0.0004159729,0.001098997,0.00028644496,0.00039105563,0.0002500382,0.00035848637,0.0007129595],"category_scores_gemma":[0.00045269026,0.00019393298,0.00039940857,0.0009239466,0.00018471251,0.00020146025,0.00023547234,0.000268371,0.00047088254],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006752746,0.001111869,0.28295588,0.00027795424,0.000082540966,0.003791173,0.0005447366,0.00043965687,0.6976587,0.00007671062,0.0003490779,0.01203654],"study_design_scores_gemma":[0.000032206026,0.0022684312,0.89653635,0.00002890671,0.00013263852,0.007409047,0.0005258869,0.00056571304,0.08877396,0.00003859048,0.0036611129,0.000027175805],"about_ca_topic_score_codex":0.0023484877,"about_ca_topic_score_gemma":0.0019727403,"teacher_disagreement_score":0.0023484877,"about_ca_system_score_codex":0.00018785491,"about_ca_system_score_gemma":0.00021556103,"threshold_uncertainty_score":0.0046696067},"labels":[],"label_agreement":null},{"id":"W2920024053","doi":"10.1093/mmy/myy087","title":"<i>Aspergillus-Pseudomonas</i> interaction, relevant to competition in airways","year":2018,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Armand Frappier Museum; Institut National de la Recherche Scientifique","funders":"Cambridge Institute for Medical Research, University of Cambridge; Austrian Science Fund","keywords":"Pyoverdine; Aspergillus fumigatus; Pseudomonas aeruginosa; Microbiology; Biofilm; Siderophore; Quorum sensing; Biology; Virulence; Pyocyanin; Bacteria; Gene; Biochemistry","score_opus":0.019043453694197205,"score_gpt":0.3067276073681892,"score_spread":0.287684153673992,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2920024053","genre_codex":"empirical","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9547615,0.021185398,0.0048519964,0.0033401714,0.00032235475,0.00010485701,0.0002789539,0.00008099971,0.015073844],"genre_scores_gemma":[0.9936906,0.002273345,0.0013273513,0.00032253005,0.000095079566,0.000030071495,0.00012768635,0.000006714671,0.0021265515],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996132,0.00009866207,0.000016289594,0.00007733322,0.000074894546,0.000119488985],"domain_scores_gemma":[0.9998184,0.00006580804,0.000034435092,0.000008107502,0.000027820297,0.00004552985],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027697533,0.0003749863,0.00038008433,0.0001933606,0.00060956954,0.0005629988,0.00059717684,0.0010139298,0.0031580988],"category_scores_gemma":[0.00035358302,0.00012448446,0.00032612067,0.00014843229,0.000448169,0.0004385802,0.00048193146,0.0005730166,0.00055698777],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026278105,0.00013337738,0.0061177113,0.00048603356,0.000025100166,0.0023458283,0.00011559804,0.00056231173,0.9741707,0.0066078217,0.0014627636,0.007710017],"study_design_scores_gemma":[0.0001277559,0.0031069315,0.14032182,0.0002462245,0.0001898807,0.018439528,0.0016508462,0.02395639,0.7358836,0.023492267,0.052442357,0.00014235832],"about_ca_topic_score_codex":0.0022468967,"about_ca_topic_score_gemma":0.0018192969,"teacher_disagreement_score":0.0031580988,"about_ca_system_score_codex":0.00057402573,"about_ca_system_score_gemma":0.00040539596,"threshold_uncertainty_score":0.010564864},"labels":[],"label_agreement":null},{"id":"W2920766005","doi":"10.1093/mmy/myy067","title":"Beyond tissue concentrations: antifungal penetration at the site of infection","year":2018,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Antifungal; Antifungal drug; Antifungal drugs; Drug; Penetration (warfare); Echinocandins; Medicine; Biology; Pharmacology; Intensive care medicine; Microbiology; Voriconazole","score_opus":0.034926496876316666,"score_gpt":0.3805637356394818,"score_spread":0.34563723876316516,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2920766005","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00024262693,0.99736905,0.00024740145,0.0004064174,0.00019524964,0.0000039623264,0.000013718877,0.0000086979235,0.0015129234],"genre_scores_gemma":[0.0020840554,0.99613273,0.00027527427,0.00023597138,0.00027721774,0.000005032476,0.000019906696,0.0000020194773,0.0009678241],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99972576,0.00004946967,0.00003920096,0.000045323974,0.00011248087,0.000027706415],"domain_scores_gemma":[0.99964595,0.00015910195,0.00005726605,0.000011301438,0.000097249926,0.000029088242],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042045958,0.000758296,0.0011164688,0.0022515184,0.00031192898,0.0015350941,0.0007797003,0.0014437985,0.0033782045],"category_scores_gemma":[0.0006354089,0.00023310317,0.00051905593,0.0014659594,0.0007944873,0.0020949286,0.0006856913,0.0017730176,0.0018552525],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008952538,0.0000926863,0.00066917745,0.02550735,0.00007594979,0.0010822304,0.00025327393,0.000498603,0.012957371,0.012406441,0.02774444,0.918623],"study_design_scores_gemma":[0.000005334363,0.000094270494,0.001016427,0.0025929827,0.00005975972,0.0055583087,0.00014086049,0.00015628965,0.0026853397,0.0033551704,0.9843135,0.000021894697],"about_ca_topic_score_codex":0.00087362656,"about_ca_topic_score_gemma":0.0011552145,"teacher_disagreement_score":0.0033782045,"about_ca_system_score_codex":0.00056928926,"about_ca_system_score_gemma":0.0009026702,"threshold_uncertainty_score":0.011301219},"labels":[],"label_agreement":null},{"id":"W2946565232","doi":"10.1093/mmy/myz048","title":"Mortality associated with Blastomyces dermatitidis infection: A systematic review of the literature and meta-analysis","year":2019,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Blastomyces dermatitidis; Blastomyces; Meta-analysis; Blastomycosis; Medicine; Systematic review; MEDLINE; Biology; Microbiology; Immunology; Pathology","score_opus":0.0800915953628408,"score_gpt":0.3781069985437963,"score_spread":0.29801540318095554,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2946565232","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0028487826,0.996027,0.0002738383,0.00012446975,0.00008764359,0.00012217037,0.00038016995,0.000011907353,0.00012393153],"genre_scores_gemma":[0.08350341,0.91319287,0.0012437478,0.0005608582,0.00019846819,0.0005087089,0.00062497414,0.000020539615,0.00014638022],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9905744,0.0037610366,0.0033552602,0.0009574856,0.0010467848,0.00030491935],"domain_scores_gemma":[0.9796109,0.01452937,0.0032940474,0.00053604494,0.0017922096,0.0002373978],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.012580973,0.002884753,0.016597115,0.009831406,0.0007173301,0.0032797563,0.0017001494,0.0018551445,0.0028597603],"category_scores_gemma":[0.030616788,0.0015385682,0.036354207,0.009396123,0.0006730279,0.0016992287,0.0016297386,0.0017386815,0.000286139],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001151876,0.00002446225,0.0054161046,0.5159395,0.4623083,0.00020180915,0.00010406371,0.00042703,0.00023991452,0.00010256668,0.00064342347,0.013440955],"study_design_scores_gemma":[0.00025738764,0.00015750472,0.0046580117,0.044403713,0.9480213,0.0002091272,0.000060434846,0.00012080049,0.00012413807,0.00015421293,0.0018043786,0.000028998502],"about_ca_topic_score_codex":0.0060701584,"about_ca_topic_score_gemma":0.013993906,"teacher_disagreement_score":0.016597115,"about_ca_system_score_codex":0.0026434325,"about_ca_system_score_gemma":0.0042899493,"threshold_uncertainty_score":0.06653535},"labels":[],"label_agreement":null},{"id":"W3014970021","doi":"10.1093/mmy/myaa016","title":"Novel Penicillium species causing disseminated disease in a Labrador Retriever dog","year":2020,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Mycotoxins in Agriculture and Food","field":"Agricultural and Biological Sciences","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Biology; Penicillium; Amphotericin B; Microbiology; Paecilomyces; Microsporum canis; Pathology; Botany; Medicine","score_opus":0.022696704053026852,"score_gpt":0.2321386256324735,"score_spread":0.20944192157944666,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3014970021","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983485,0.00069783337,0.00030600134,0.000066894514,0.000015445012,0.000016594828,0.00010088977,0.000009511123,0.00043829993],"genre_scores_gemma":[0.9982765,0.0004041558,0.0005349289,0.00008197629,0.00002816823,0.0000039663623,0.00024825434,0.0000046027285,0.00041747332],"study_design_codex":"bench_or_experimental","study_design_gemma":"case_report","domain_scores_codex":[0.99980575,0.000018380882,0.000021808863,0.00005883571,0.000048948794,0.000046301157],"domain_scores_gemma":[0.99978286,0.00003074252,0.000079346486,0.000017531604,0.000027159691,0.0000623021],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015274445,0.00038764277,0.00038712207,0.00034310055,0.00022251901,0.000559693,0.00027525547,0.0007085098,0.00040387327],"category_scores_gemma":[0.0003636055,0.00013945006,0.0002443311,0.00021389287,0.00021511507,0.00033645282,0.00024317233,0.0003437639,0.00027246485],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00062607095,0.00045610394,0.12932658,0.00032316902,0.00008005389,0.1989489,0.0013645166,0.00044597406,0.64759433,0.00014927935,0.0005192157,0.020165749],"study_design_scores_gemma":[0.00007058979,0.0031171187,0.48998076,0.00005839082,0.00014691999,0.43779844,0.0015759598,0.0011216406,0.05771728,0.000086624954,0.008283108,0.00004319258],"about_ca_topic_score_codex":0.00078291225,"about_ca_topic_score_gemma":0.0009690302,"teacher_disagreement_score":0.00078291225,"about_ca_system_score_codex":0.00021179386,"about_ca_system_score_gemma":0.00010180744,"threshold_uncertainty_score":0.0015566945},"labels":[],"label_agreement":null},{"id":"W3087503803","doi":"10.1093/mmy/myaa075","title":"On the lineage of <i>Aspergillus fumigatus</i> isolates in common laboratory use","year":2020,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":92,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Biotechnology and Biological Sciences Research Council; Medical Research Council; Medical Research Council Canada; Wellcome Trust","keywords":"Aspergillus fumigatus; Biology; Documentation; Nomenclature; Microbiology; Genetics; Library science; Computer science; Zoology; Taxonomy (biology); Programming language","score_opus":0.025740067195864608,"score_gpt":0.279775039189854,"score_spread":0.2540349719939894,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3087503803","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.68845165,0.092030264,0.042039186,0.0146547165,0.0018983519,0.0007801353,0.07715608,0.0025217535,0.08046782],"genre_scores_gemma":[0.7541696,0.07846729,0.06810333,0.0056424597,0.0011279992,0.000366038,0.07328199,0.001227778,0.017613586],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9982132,0.0003481206,0.00045913196,0.00031160456,0.0004821469,0.00018588595],"domain_scores_gemma":[0.9955837,0.0011614452,0.0015412011,0.00047114474,0.0010053215,0.00023718948],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002085461,0.00033851922,0.00041054084,0.0029718943,0.00078736723,0.0019003286,0.00048375266,0.000564717,0.0039024893],"category_scores_gemma":[0.005235898,0.00018567435,0.00027829298,0.0047847657,0.00057631586,0.0013490315,0.0012242087,0.0008303698,0.0037805678],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013894078,0.0001106541,0.1558104,0.0057089063,0.0001267654,0.0032954076,0.013342997,0.00035634413,0.2713495,0.00627951,0.057423692,0.48480633],"study_design_scores_gemma":[0.000017857546,0.000672481,0.30113995,0.0035042025,0.00020089683,0.007384013,0.0050502596,0.00026635124,0.054010663,0.0024099576,0.6252073,0.00013600466],"about_ca_topic_score_codex":0.002628657,"about_ca_topic_score_gemma":0.0040349932,"teacher_disagreement_score":0.0039024893,"about_ca_system_score_codex":0.00047921573,"about_ca_system_score_gemma":0.0007845523,"threshold_uncertainty_score":0.013055146},"labels":[],"label_agreement":null},{"id":"W3110340660","doi":"10.1093/mmy/myaa096","title":"Genotypic diversity and antifungal susceptibility of environmental isolates of <i>Cryptococcus neoformans</i> from the Yangtze River Delta region of East China","year":2020,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"National Natural Science Foundation of China","keywords":"Cryptococcus neoformans; Cryptococcosis; Biology; Cryptococcus; Fluconazole; Genetic diversity; Genotype; Microbiology; Population; Antifungal; Gene; Genetics; Medicine; Environmental health","score_opus":0.017277585859770066,"score_gpt":0.2205503015760861,"score_spread":0.20327271571631603,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3110340660","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9997508,0.00003020899,0.000031298066,0.0000054885163,5.3703434e-7,0.0000036863098,0.000102798025,6.4223497e-7,0.000074435295],"genre_scores_gemma":[0.99946326,0.000037381982,0.000076038836,0.000010549474,0.0000016853936,0.000004959319,0.0003059267,5.1030884e-7,0.00009967121],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99975973,0.000026439931,0.00003410856,0.00007840201,0.00004864444,0.000052728363],"domain_scores_gemma":[0.99977654,0.000033349195,0.000070174465,0.000016707874,0.000053502434,0.000049695704],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024371476,0.00025637477,0.0001876825,0.0009785187,0.00039317546,0.000309335,0.00014897124,0.00019040969,0.00047395684],"category_scores_gemma":[0.0002943958,0.000111553585,0.00017659825,0.0007945502,0.00034569832,0.00014112578,0.0003086872,0.00013528038,0.00005284055],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010790377,0.000040400097,0.96256316,0.000045035278,0.00006284752,0.00033198274,0.0005953579,0.00018950437,0.030698525,0.000033639917,0.000069511945,0.005262056],"study_design_scores_gemma":[0.0000039956617,0.000038097955,0.9980738,0.0000029557957,0.000013094398,0.00018318472,0.0003295979,0.00012793392,0.0010671938,0.000010755577,0.00014609816,0.000003267907],"about_ca_topic_score_codex":0.012721055,"about_ca_topic_score_gemma":0.01779581,"teacher_disagreement_score":0.012721055,"about_ca_system_score_codex":0.00039757395,"about_ca_system_score_gemma":0.0003725766,"threshold_uncertainty_score":0.025294006},"labels":[],"label_agreement":null},{"id":"W3115852371","doi":"10.1093/mmy/myaa100","title":"Cross-reactivity of a <i>Histoplasma capsulatum</i> antigen enzyme immunoassay in urine specimens from persons with emergomycosis in South Africa","year":2020,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Histoplasmosis; Histoplasma; Immunoassay; Histopathology; Antigen; Dimorphic fungus; Urine; Biology; Cryptococcosis; Mycosis; Microbiology; Pathology; Medicine; Immunology; Antibody; Internal medicine; Histoplasma capsulatum","score_opus":0.020749217362483252,"score_gpt":0.261718104516076,"score_spread":0.24096888715359277,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3115852371","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9993874,0.00014320994,0.00009377224,0.000029915296,0.0000043695463,0.000013421324,0.000027519289,0.0000037606642,0.0002966355],"genre_scores_gemma":[0.99962866,0.000105596504,0.00014530116,0.0000405066,0.0000045874676,0.000005182951,0.000029702318,9.557242e-7,0.00003944416],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991116,0.0002294414,0.00017379918,0.00014174217,0.00019106794,0.00015244527],"domain_scores_gemma":[0.99884725,0.0003323735,0.00045513682,0.000060319213,0.00017296574,0.00013194341],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00080124405,0.00039570624,0.00028894618,0.0011953554,0.00064201304,0.0006155886,0.00027997332,0.0004598877,0.00075764337],"category_scores_gemma":[0.0035092048,0.0004121401,0.00020801158,0.00067598233,0.00051879155,0.00033006934,0.00041110674,0.00027717662,0.00016212957],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058681973,0.0000495363,0.98935854,0.00003951141,0.000016730455,0.0025150394,0.000828459,0.00002968341,0.0043566474,0.00001569958,0.000082942504,0.0026484863],"study_design_scores_gemma":[0.000011793818,0.00029857433,0.9798391,0.000049081056,0.00003528692,0.013552555,0.0015638224,0.00024592658,0.0038896322,0.00002281332,0.000482089,0.000009394157],"about_ca_topic_score_codex":0.005761825,"about_ca_topic_score_gemma":0.005091413,"teacher_disagreement_score":0.005761825,"about_ca_system_score_codex":0.00047137475,"about_ca_system_score_gemma":0.00032393486,"threshold_uncertainty_score":0.011456609},"labels":[],"label_agreement":null},{"id":"W3120978965","doi":"10.1093/mmy/myaa110","title":"CYP51A polymorphisms of<i>Aspergillus fumigatus</i>in lung transplant recipients: Prevalence, correlation with phenotype, and impact on outcomes","year":2021,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Public Health Ontario; University Health Network","funders":"","keywords":"Aspergillus fumigatus; Genotyping; Broth microdilution; Genotype; Aspergillus; Aspergillosis; Biology; Lung; Microbiology; Medicine; Immunology; Internal medicine; Antibiotics; Minimum inhibitory concentration; Gene; Genetics","score_opus":0.007554788825837017,"score_gpt":0.2801611669687001,"score_spread":0.27260637814286304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3120978965","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9995454,0.00023752796,0.00004546462,0.000016966449,0.000002348939,0.0000026789628,0.000032188,0.0000018317543,0.00011549964],"genre_scores_gemma":[0.9998048,0.00007134312,0.000022922944,0.000010456265,0.000007525062,0.0000017155257,0.000047386184,6.1861255e-7,0.000033284687],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99971145,0.00007480304,0.000035933324,0.00006388981,0.000059730733,0.000054176217],"domain_scores_gemma":[0.99933475,0.00018052313,0.00029052785,0.000039154213,0.000041281877,0.00011360938],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049445877,0.0002226763,0.00024799377,0.00034166258,0.0002238221,0.00032575277,0.00014338287,0.00030704174,0.0011927503],"category_scores_gemma":[0.0010175442,0.0001238444,0.00018456586,0.0002862252,0.0002416179,0.00022032911,0.00019821462,0.00032832657,0.00026408673],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025389882,0.000033343553,0.99583,0.000010446219,0.000021960677,0.00024443326,0.000033862212,0.000028055687,0.001166913,0.0000054925204,0.000068546826,0.0023031004],"study_design_scores_gemma":[0.0000081320195,0.00023876195,0.99781716,0.0000054011734,0.000027730475,0.0012992552,0.00007051761,0.00012279961,0.00032284626,0.000010880268,0.000074372496,0.0000021046746],"about_ca_topic_score_codex":0.0006558157,"about_ca_topic_score_gemma":0.000738375,"teacher_disagreement_score":0.0011927503,"about_ca_system_score_codex":0.0001874668,"about_ca_system_score_gemma":0.00012959659,"threshold_uncertainty_score":0.0039901137},"labels":[],"label_agreement":null},{"id":"W3125108974","doi":"10.1093/mmy/myaa120","title":"A novel TaqMan qPCR assay for rapid detection and quantification of pro-inflammatory microalgae <i>Prototheca</i> spp. in milk samples","year":2021,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Milk Quality and Mastitis in Dairy Cows","field":"Agricultural and Biological Sciences","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Národní Agentura pro Zemědělský Výzkum; Natural Environment Research Council; Sight Research UK; Ministry of Agriculture - Saskatchewan","keywords":"Biology; TaqMan; Microbiology; Mastitis; Multiplex; Genotype; Real-time polymerase chain reaction; Gene; Genetics","score_opus":0.03960362158448398,"score_gpt":0.2622983675124921,"score_spread":0.2226947459280081,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3125108974","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16969438,0.0054846765,0.7963099,0.0006641413,0.0015044605,0.0030989815,0.0073285443,0.0059509147,0.009963969],"genre_scores_gemma":[0.21435829,0.0030725389,0.7345034,0.0014209369,0.00042335718,0.009665969,0.014062683,0.00049339,0.021999503],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99202955,0.0015094902,0.0005601784,0.0031191634,0.0021856995,0.000595929],"domain_scores_gemma":[0.998351,0.0005687699,0.00031575328,0.00018701983,0.0004461949,0.00013137587],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0032417637,0.0026825517,0.0023428146,0.0026671346,0.00081811054,0.0013884394,0.0018387027,0.002755246,0.0043120193],"category_scores_gemma":[0.0030846393,0.0022292137,0.001710712,0.0017470039,0.0014183457,0.001039979,0.0012193247,0.0025750163,0.0031134863],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002633028,0.00028083503,0.0033374755,0.0005349252,0.00007048227,0.00011797301,0.00024604506,0.0007265033,0.9755976,0.0009940024,0.001021506,0.016809262],"study_design_scores_gemma":[0.00018376253,0.0021640367,0.009539437,0.00025677664,0.00027121455,0.0012876783,0.00021112808,0.022853456,0.9161734,0.0012973805,0.04553117,0.00023061076],"about_ca_topic_score_codex":0.0008033487,"about_ca_topic_score_gemma":0.0019160787,"teacher_disagreement_score":0.0043120193,"about_ca_system_score_codex":0.001092804,"about_ca_system_score_gemma":0.0021345143,"threshold_uncertainty_score":0.017144263},"labels":[],"label_agreement":null},{"id":"W3174090680","doi":"10.1093/mmy/myab036","title":"Raw bovine milk as a reservoir of yeast with virulence factors and decreased susceptibility to antifungal agents","year":2021,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Milk Quality and Mastitis in Dairy Cows","field":"Agricultural and Biological Sciences","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Ministry of Agriculture - Saskatchewan","keywords":"Yeast; Biology; Fluconazole; Microbiology; Kluyveromyces marxianus; Flucytosine; Kluyveromyces lactis; Virulence; Raw milk; Food science; Antifungal; Saccharomyces cerevisiae; Biochemistry","score_opus":0.026639854116631115,"score_gpt":0.27236189628438695,"score_spread":0.24572204216775584,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3174090680","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995561,0.0031513,0.0002863126,0.00007561832,0.000011146195,0.000008803553,0.00035536988,0.0000148920335,0.0005355225],"genre_scores_gemma":[0.99729735,0.000933687,0.0006681557,0.000062463085,0.000011502045,0.000004355421,0.00053596456,0.000004776683,0.0004816919],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99957556,0.00006269169,0.000037581223,0.00007545219,0.00016379914,0.00008486814],"domain_scores_gemma":[0.9996449,0.00004856469,0.00014665909,0.00001759967,0.00009536475,0.000046979647],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031641847,0.0003240581,0.00038516868,0.0006937406,0.00037639795,0.00081541494,0.00025416102,0.0003149711,0.0010979348],"category_scores_gemma":[0.00049135875,0.00011956573,0.0002499564,0.0006411282,0.00018940402,0.00024459773,0.00038165884,0.0002572587,0.00023609618],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013134686,0.00018107076,0.5049659,0.00043655993,0.00010751552,0.0022960554,0.0005613391,0.00011964064,0.46638075,0.00008793089,0.00035735063,0.023192348],"study_design_scores_gemma":[0.000013603275,0.000392909,0.92606705,0.000103530554,0.00014317007,0.004982536,0.001045829,0.00052893546,0.062026512,0.00007130087,0.004606871,0.000017790677],"about_ca_topic_score_codex":0.005142772,"about_ca_topic_score_gemma":0.004483202,"teacher_disagreement_score":0.005142772,"about_ca_system_score_codex":0.00030767472,"about_ca_system_score_gemma":0.00031573116,"threshold_uncertainty_score":0.010225713},"labels":[],"label_agreement":null},{"id":"W3188911186","doi":"10.1093/mmy/myab042","title":"Complexing amphotericin B with gold nanoparticles improves fungal clearance from the brains of mice infected with Cryptococcal neoformans","year":2021,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Cytodiagnostics (Canada)","funders":"Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; EMC; U.S. Department of Veterans Affairs","keywords":"Amphotericin B; Cryptococcus neoformans; Microbiology; Colloidal gold; Cryptococcal meningitis; Antifungal; Cryptococcosis; Mycosis; Medicine; Chemistry; Virology; Immunology; Biology; Nanoparticle; Nanotechnology; Materials science; Human immunodeficiency virus (HIV)","score_opus":0.01255045407031422,"score_gpt":0.2518261029078343,"score_spread":0.2392756488375201,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3188911186","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961689,0.0010718871,0.0015031783,0.00010732372,0.00003912133,0.000027208192,0.00009737794,0.00008658834,0.0008984349],"genre_scores_gemma":[0.99175686,0.0010695293,0.0033579424,0.00011216319,0.000012897541,0.000053564207,0.00021158342,0.000021952517,0.0034034692],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999429,0.000007682646,0.0000057428197,0.000014817109,0.000014727987,0.000014097734],"domain_scores_gemma":[0.99996114,0.000004897613,0.000010259295,0.0000027635754,0.0000064639435,0.0000144931],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000082425526,0.0003842538,0.00024529462,0.00017365935,0.0000887803,0.0001255412,0.00017451902,0.00035327722,0.00054734125],"category_scores_gemma":[0.00008385814,0.00015824463,0.0001552036,0.000068959744,0.00012140833,0.00017895151,0.00011290779,0.00044255942,0.00014171601],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013443851,0.00003767497,0.000038698057,0.000026716038,0.000003021902,0.0000144680225,0.0000081406615,0.000037061138,0.998409,0.00001146245,0.000032145366,0.0012471834],"study_design_scores_gemma":[0.000029424877,0.0010798386,0.0016299216,0.0000065528416,0.000015365797,0.00009876352,0.000016700185,0.0010739089,0.99489564,0.000027931832,0.001120694,0.000005199493],"about_ca_topic_score_codex":0.00090567174,"about_ca_topic_score_gemma":0.0010761756,"teacher_disagreement_score":0.00090567174,"about_ca_system_score_codex":0.00012311603,"about_ca_system_score_gemma":0.0001368256,"threshold_uncertainty_score":0.0018310547},"labels":[],"label_agreement":null},{"id":"W3211206392","doi":"10.1093/mmy/myab069","title":"Factors determining the mortality in cirrhosis patients with invasive candidiasis: A systematic review and meta-analysis","year":2021,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Liver Disease and Transplantation","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Meta-analysis; Invasive candidiasis; Cirrhosis; Medicine; Internal medicine; Intensive care medicine; Dermatology; Antifungal; Fluconazole","score_opus":0.11486010021766142,"score_gpt":0.3675650583548809,"score_spread":0.2527049581372195,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3211206392","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00499158,0.9936278,0.0003973358,0.00017704544,0.00008321942,0.00020475267,0.00034774805,0.000017594504,0.00015299696],"genre_scores_gemma":[0.14530003,0.8495076,0.0021165977,0.00071679545,0.00025414897,0.0009156901,0.00086745044,0.000024481053,0.00029723553],"study_design_codex":"meta_analysis","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9934809,0.0024688642,0.0023477178,0.0006539481,0.00080538465,0.00024323467],"domain_scores_gemma":[0.98721814,0.008872211,0.0021534145,0.00039682916,0.0011545892,0.0002047505],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.010968031,0.0026727377,0.017299421,0.007107666,0.0006325991,0.0033780618,0.0018065476,0.0020322884,0.0027612008],"category_scores_gemma":[0.021418449,0.001424743,0.037863873,0.007534266,0.0005963655,0.0015824814,0.0014933406,0.0016745635,0.000248948],"study_design_candidate":"meta_analysis","study_design_consensus":"meta_analysis","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014557067,0.00003689943,0.0069761993,0.3613685,0.6170594,0.00017413199,0.00010108857,0.0005307417,0.0002322988,0.00011193871,0.00048071018,0.011472399],"study_design_scores_gemma":[0.00023181511,0.00012315658,0.004293818,0.019706482,0.9741013,0.000094704024,0.000040259692,0.00018939894,0.00008678041,0.0001173475,0.0009941333,0.000020655958],"about_ca_topic_score_codex":0.0055800257,"about_ca_topic_score_gemma":0.012301713,"teacher_disagreement_score":0.017299421,"about_ca_system_score_codex":0.0020720116,"about_ca_system_score_gemma":0.003613731,"threshold_uncertainty_score":0.058005154},"labels":[],"label_agreement":null},{"id":"W4200417643","doi":"10.1093/mmy/myab079","title":"Four genomic clades of <i>Candida auris</i> identified in Canada, 2012–2019","year":2021,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Ontario; BC Centre for Disease Control; University of Toronto; Ste. Anne's Hospital; Alberta Hospital Edmonton; University of Alberta; University of Manitoba; Public Health Agency of Canada","funders":"Public Health Agency of Canada","keywords":"Candida auris; Clade; Biology; Outbreak; Phylogenetic tree; Microbiology; Virology; Genetics; Gene; Antifungal","score_opus":0.011385216888499559,"score_gpt":0.25405274762664243,"score_spread":0.24266753073814287,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200417643","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9699583,0.0029523163,0.0006593508,0.0008880233,0.00004381644,0.00010622329,0.017611315,0.00007159953,0.007708981],"genre_scores_gemma":[0.9846213,0.001601954,0.0013370448,0.0005713299,0.000014030039,0.000026660568,0.009227383,0.000020278576,0.0025800113],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99960715,0.000010497037,0.00001756428,0.000070574824,0.00012865219,0.00016558084],"domain_scores_gemma":[0.9991013,0.00003287276,0.00016661064,0.00002459664,0.00044353554,0.00023114882],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024289843,0.00036858278,0.00021622075,0.001993591,0.00215489,0.00106278,0.0005014837,0.00038332338,0.0017721824],"category_scores_gemma":[0.0009374499,0.0002038864,0.00036603902,0.0029782322,0.00058812683,0.00019267964,0.0007220322,0.0006428567,0.0002818126],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045270447,0.000037686987,0.9293843,0.00022373404,0.00009480445,0.0018954868,0.0025520497,0.00045793838,0.014063902,0.00071324944,0.009857318,0.04026679],"study_design_scores_gemma":[0.000009153337,0.000033913228,0.9799755,0.000097391196,0.000051361796,0.0013537292,0.002782727,0.00032274716,0.0010695982,0.000073264724,0.014209939,0.00002066497],"about_ca_topic_score_codex":0.9705066,"about_ca_topic_score_gemma":0.9831086,"teacher_disagreement_score":0.029493392,"about_ca_system_score_codex":0.009917322,"about_ca_system_score_gemma":0.019744316,"threshold_uncertainty_score":0.0719555},"labels":[],"label_agreement":null},{"id":"W4205741575","doi":"10.1093/mmy/myac004","title":"Assessment of panfungal PCR performance with formalin-fixed paraffin-embedded tissue specimens","year":2022,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"","keywords":"Blastomyces; Cryptococcus neoformans; Biology; Amplicon; Polymerase chain reaction; Histopathology; Microbiology; Sanger sequencing; Blastomyces dermatitidis; DNA extraction; Pathology; DNA sequencing; Blastomycosis; DNA; Medicine; Genetics; Gene; Immunology","score_opus":0.05690236442366374,"score_gpt":0.39210470447976264,"score_spread":0.3352023400560989,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205741575","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0051686503,0.9924931,0.00067449623,0.00012983938,0.000112988266,0.000047169513,0.00007890357,0.000012568722,0.0012822578],"genre_scores_gemma":[0.035729077,0.95929986,0.003569122,0.00019465401,0.00014279367,0.00006490426,0.00024309235,0.000009977016,0.00074649864],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99844426,0.0005402245,0.0002891842,0.0001597103,0.00049130886,0.000075321674],"domain_scores_gemma":[0.99644667,0.0013589513,0.00057326554,0.00012145496,0.0014305824,0.00006920929],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0065361154,0.0005398801,0.0010254547,0.0038837644,0.00015080391,0.0005579681,0.0006269036,0.00044303323,0.0014086693],"category_scores_gemma":[0.004467103,0.00021401056,0.00047013015,0.0024620534,0.00032858772,0.00072516466,0.00029735485,0.0003451423,0.0005649159],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003717989,0.000053463045,0.010098618,0.059243083,0.0006002027,0.0006389704,0.00038056995,0.0004018664,0.018237412,0.0006652191,0.0045948206,0.90471405],"study_design_scores_gemma":[0.00011943204,0.0030329248,0.10893317,0.046044234,0.0064703063,0.016112598,0.0016462912,0.0011033956,0.059840374,0.0011176389,0.75543195,0.00014763283],"about_ca_topic_score_codex":0.0012113738,"about_ca_topic_score_gemma":0.003120756,"teacher_disagreement_score":0.0065361154,"about_ca_system_score_codex":0.00048449033,"about_ca_system_score_gemma":0.0011159207,"threshold_uncertainty_score":0.0345667},"labels":[],"label_agreement":null},{"id":"W4211216967","doi":"10.1080/mmy.38.4.255.287","title":"Tinea capitis","year":2000,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":146,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Tinea capitis; Dermatology; Medicine","score_opus":0.038576107485677205,"score_gpt":0.4068688285905722,"score_spread":0.368292721104895,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4211216967","genre_codex":"other","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15294057,0.26451626,0.00884717,0.008780795,0.005694691,0.0013434307,0.003932381,0.0031946106,0.5507502],"genre_scores_gemma":[0.8284173,0.066982456,0.004517159,0.015400611,0.0018284064,0.00033246208,0.002596263,0.00023812574,0.079687245],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989416,0.00013525269,0.00006935102,0.00020814048,0.00031294435,0.00033280012],"domain_scores_gemma":[0.9991855,0.00011192692,0.00016890357,0.00006449706,0.0002726006,0.00019648563],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041347768,0.0014294044,0.0011855231,0.0014561262,0.0021914658,0.0018281265,0.0008511684,0.0017303416,0.02067897],"category_scores_gemma":[0.0023272973,0.0003149363,0.000875748,0.0013661126,0.000933112,0.0010684452,0.0012521883,0.0019273967,0.006989043],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010464474,0.0012145522,0.06987746,0.0060108933,0.00035757283,0.16679227,0.0013777309,0.00071517506,0.020175526,0.0069763195,0.21871838,0.5067377],"study_design_scores_gemma":[0.00018509348,0.0007955364,0.06217981,0.0033037667,0.00028983672,0.42458013,0.0013533963,0.0010218543,0.004455647,0.003730808,0.4979497,0.00015430916],"about_ca_topic_score_codex":0.013971599,"about_ca_topic_score_gemma":0.007885211,"teacher_disagreement_score":0.02067897,"about_ca_system_score_codex":0.0015564745,"about_ca_system_score_gemma":0.001201362,"threshold_uncertainty_score":0.069178045},"labels":[],"label_agreement":null},{"id":"W4231022997","doi":"10.1093/mmy/myx132","title":"Transcriptional profile of the human skin pathogenic fungus Mucor irregularis in response to low oxygen","year":2017,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Mucor; Fungus; Microbiology; Biology; Botany","score_opus":0.017429812420373524,"score_gpt":0.3134301501019337,"score_spread":0.2960003376815602,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4231022997","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99610233,0.00095616776,0.0004720026,0.00013663516,0.00002506426,0.000015451982,0.0013576987,0.000013499765,0.0009210739],"genre_scores_gemma":[0.9956131,0.00039622257,0.0003021734,0.00008460687,0.000017664514,0.00002321507,0.0014150696,0.000006575314,0.0021413942],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998172,0.000021849915,0.000008634169,0.00005074631,0.000036809353,0.000064807726],"domain_scores_gemma":[0.99991035,0.000020155705,0.000019003655,0.000008060532,0.000021806318,0.000020678934],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010727804,0.00012288708,0.00025913058,0.00023288325,0.00026200965,0.00034747215,0.000084777,0.00022418263,0.0018753909],"category_scores_gemma":[0.00019938966,0.000092954455,0.00023120975,0.00024586546,0.0001928436,0.00013121948,0.00017131734,0.00027442983,0.000359237],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007575874,0.000052342042,0.0046172203,0.000042275362,0.000010285413,0.00008071254,0.00009914244,0.000061964056,0.9922362,0.000055906552,0.000115685514,0.0018706388],"study_design_scores_gemma":[0.00006627909,0.0011709967,0.6727446,0.00003756755,0.000093102324,0.0008634845,0.0017846075,0.0026235385,0.31580004,0.00030108876,0.0044862055,0.00002846974],"about_ca_topic_score_codex":0.001400697,"about_ca_topic_score_gemma":0.0019052858,"teacher_disagreement_score":0.0018753909,"about_ca_system_score_codex":0.00017702344,"about_ca_system_score_gemma":0.0001261998,"threshold_uncertainty_score":0.0062738657},"labels":[],"label_agreement":null},{"id":"W4234185301","doi":"10.1080/714031141","title":"Effect of CD40 ligand on the course of murine histoplasmosis","year":2002,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Research & Development Corporation","funders":"","keywords":"Histoplasmosis; Amphotericin B; Spleen; Histoplasma; Microbiology; Immune system; CD40; Immunology; Inoculation; Biology; Ratón; Mycosis; Histoplasma capsulatum; Antifungal; In vitro; Cytotoxic T cell; Biochemistry","score_opus":0.0131348334047641,"score_gpt":0.2803783984741136,"score_spread":0.2672435650693495,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4234185301","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99587953,0.0016704248,0.00031049858,0.00014665404,0.000050327013,0.000029813105,0.00030095762,0.00007550874,0.0015363138],"genre_scores_gemma":[0.9966859,0.00049820653,0.0005177013,0.00010802137,0.00002950021,0.000038186958,0.00039217967,0.000011740406,0.0017184961],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997466,0.000079982376,0.000017261546,0.000029847866,0.00004002559,0.000086264765],"domain_scores_gemma":[0.9996846,0.000078268815,0.00006658222,0.000025638197,0.000025518619,0.00011947552],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019316786,0.0003229392,0.00026657418,0.0001811367,0.00014631335,0.0003240136,0.00017061556,0.00041105482,0.0015516107],"category_scores_gemma":[0.000274417,0.000119053664,0.00012137233,0.000075651486,0.00019808086,0.00015949529,0.00015159108,0.0010379723,0.0004747649],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014463878,0.00038809917,0.00055306737,0.00006238397,0.000004355529,0.00011008514,0.00003386416,0.00012483622,0.9931925,0.000054860953,0.00011871242,0.0039108694],"study_design_scores_gemma":[0.00022957602,0.0063194013,0.01312409,0.000041253064,0.00002950986,0.00027316724,0.000045242345,0.0010575968,0.9753234,0.000053822514,0.0034878855,0.000015095522],"about_ca_topic_score_codex":0.0003734222,"about_ca_topic_score_gemma":0.0008737901,"teacher_disagreement_score":0.0015516107,"about_ca_system_score_codex":0.0003347576,"about_ca_system_score_gemma":0.0002558049,"threshold_uncertainty_score":0.005190611},"labels":[],"label_agreement":null},{"id":"W4237691932","doi":"10.1080/714030949","title":"Tinea capitis","year":2000,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Tinea capitis; Dermatology; Medicine","score_opus":0.004743894208583431,"score_gpt":0.28031327635629927,"score_spread":0.2755693821477158,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4237691932","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15458086,0.26577866,0.009074859,0.00891412,0.0057884264,0.0013886493,0.0040086694,0.0031806002,0.5472852],"genre_scores_gemma":[0.8296325,0.067432895,0.004538824,0.015308133,0.0018559037,0.00033434088,0.0026540514,0.00024451455,0.07799884],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989079,0.00013982484,0.000071745606,0.00021488086,0.00032405625,0.0003416067],"domain_scores_gemma":[0.99915504,0.00011672884,0.00017492536,0.00006743916,0.00028688865,0.00019888388],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042349278,0.0014379601,0.0012220029,0.0014715623,0.0022052745,0.0018296709,0.0008627997,0.0017300029,0.021023465],"category_scores_gemma":[0.002385038,0.0003219346,0.0008948897,0.0013673544,0.0009355882,0.0011080565,0.0012660121,0.002001118,0.0071192607],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010775055,0.0012571836,0.06991434,0.0061869007,0.00036517737,0.16670805,0.0014032469,0.00071884895,0.020145847,0.0071035824,0.22265762,0.50246173],"study_design_scores_gemma":[0.00018977655,0.00080890744,0.0612103,0.003422392,0.00029519523,0.4301007,0.0013747393,0.0010416073,0.0044456045,0.0038067105,0.49314585,0.00015825772],"about_ca_topic_score_codex":0.013854382,"about_ca_topic_score_gemma":0.007732841,"teacher_disagreement_score":0.021023465,"about_ca_system_score_codex":0.0015689923,"about_ca_system_score_gemma":0.0012053634,"threshold_uncertainty_score":0.07033044},"labels":[],"label_agreement":null},{"id":"W4246389663","doi":"10.1080/714031037","title":"Comparative efficacies of commonly used disinfectants and antifungal pharmaceutical spray preparations against dermatophytic fungi","year":2001,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; University of Toronto; Mediprobe Research (Canada); Sunnybrook Health Science Centre; Ministry of Health and Long Term Care","funders":"","keywords":"Trichophyton; Bifonazole; Microbiology; Terbinafine; Ammonium; Microsporum; Chemistry; Fungicide; Dermatophyte; Griseofulvin; Sodium hypochlorite; Trichophyton tonsurans; Biology; Antifungal; Organic chemistry; Medicine; Botany; Dermatology","score_opus":0.039700681229219485,"score_gpt":0.3776373371903428,"score_spread":0.3379366559611233,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4246389663","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947802,0.0036497887,0.00063725293,0.00004125461,0.000020631602,0.000041439067,0.00015260545,0.000019300402,0.0006575662],"genre_scores_gemma":[0.99155056,0.003879473,0.0032320619,0.00003793362,0.00002538469,0.00004941045,0.00033274712,0.0000135463015,0.0008788081],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995158,0.00012625907,0.00008376311,0.000081564154,0.0001418708,0.000050760435],"domain_scores_gemma":[0.99945134,0.00017942573,0.00013158364,0.00003639065,0.00012226883,0.000079053214],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003417849,0.0005428419,0.00042829948,0.00049621094,0.00017134626,0.00032291733,0.00037941692,0.0004220363,0.0011216849],"category_scores_gemma":[0.000692159,0.00022016089,0.0003334237,0.00036671103,0.0001943306,0.00029107492,0.00021431073,0.00033795866,0.00019246868],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00065423385,0.00021989956,0.001318837,0.00027441586,0.0000421068,0.000092900154,0.00007108509,0.00016590218,0.98833734,0.000037790825,0.00004065228,0.008744933],"study_design_scores_gemma":[0.000051295967,0.011294927,0.016382199,0.00004621626,0.00018978395,0.0006167038,0.00012149521,0.00044479073,0.96873873,0.000022839902,0.0020714628,0.000019679652],"about_ca_topic_score_codex":0.0005174532,"about_ca_topic_score_gemma":0.0013875364,"teacher_disagreement_score":0.0011216849,"about_ca_system_score_codex":0.00014610103,"about_ca_system_score_gemma":0.00016390452,"threshold_uncertainty_score":0.0037523508},"labels":[],"label_agreement":null},{"id":"W4280521318","doi":"10.1093/mmy/myac032","title":"Serial (1–3)-beta-D-Glucan (BDG) monitoring shows high variability among premature neonates","year":2022,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Neonatal and Maternal Infections","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; Medical Research Council Canada","keywords":"Medicine; Gestational age; Birth weight; Blood sampling; Prospective cohort study; Pediatrics; Internal medicine; Gastroenterology; Pregnancy; Biology","score_opus":0.009349852503917807,"score_gpt":0.26166000327718736,"score_spread":0.25231015077326957,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4280521318","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99756926,0.0014749079,0.00042978584,0.000020043073,0.000008652738,0.0000050410317,0.00020501747,0.000012006082,0.0002752494],"genre_scores_gemma":[0.99882835,0.00039494663,0.00042053478,0.000022492834,0.000009073724,0.000007457815,0.00024644352,0.0000050703347,0.0000655949],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99881774,0.00027773733,0.00015539011,0.00033104364,0.00033367187,0.000084442414],"domain_scores_gemma":[0.99795216,0.0005885862,0.0009739647,0.00017071457,0.00020901409,0.0001055669],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010011246,0.00035389038,0.0004622862,0.00064181053,0.00013398084,0.00069226755,0.00026531072,0.00037698686,0.00029128342],"category_scores_gemma":[0.0032535766,0.00016649142,0.0002375424,0.00070756173,0.00021899413,0.00027246564,0.00027973132,0.00034890248,0.00011808404],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030739102,0.000018318442,0.9836753,0.000042022322,0.00005320952,0.00043230943,0.00013329115,0.00009008685,0.0073726755,0.00002568616,0.000056228004,0.0077933823],"study_design_scores_gemma":[0.0000026471446,0.00023792867,0.9950216,0.00001395524,0.000024798506,0.0016564121,0.00011159418,0.00025547965,0.0023925558,0.00003222985,0.00024580793,0.000005048564],"about_ca_topic_score_codex":0.0007553063,"about_ca_topic_score_gemma":0.00056727487,"teacher_disagreement_score":0.0010011246,"about_ca_system_score_codex":0.00020997557,"about_ca_system_score_gemma":0.0001433845,"threshold_uncertainty_score":0.005294502},"labels":[],"label_agreement":null},{"id":"W4283073104","doi":"10.1093/mmy/myac046","title":"Aspergillosis in a colony of Humboldt penguins (<i>Spheniscus humboldti</i>) under managed care: a clinical and environmental investigation in a French zoological park","year":2022,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotel Dieu Hospital","funders":"","keywords":"Aspergillus fumigatus; Aspergillosis; Biology; Incidence (geometry); Population; Microsatellite; Aspergillus; Zoology; Veterinary medicine; Ecology; Gene; Microbiology; Medicine; Immunology; Genetics; Environmental health","score_opus":0.019797419713243662,"score_gpt":0.29460487360007925,"score_spread":0.2748074538868356,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283073104","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99970776,0.00007418364,0.000028037102,0.000021428017,0.0000028650663,0.0000090097665,0.000036529353,0.0000022148429,0.0001179633],"genre_scores_gemma":[0.9995308,0.000074904514,0.000058009653,0.000028493412,0.0000067195506,0.000003242719,0.000059045124,8.5484504e-7,0.00023808239],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99986506,0.000018403409,0.000007144509,0.00004948727,0.000019988316,0.000039873543],"domain_scores_gemma":[0.99976915,0.000014297522,0.000042624153,0.000009620477,0.000023659994,0.00014058722],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000100126235,0.00059001043,0.00028594045,0.0006285443,0.001092422,0.0003938175,0.00024808553,0.000497023,0.0006472141],"category_scores_gemma":[0.00021735246,0.00021707533,0.00023717806,0.00027414213,0.00068660843,0.00017370639,0.0004162361,0.0003315279,0.00012093368],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004654071,0.0005765955,0.9023345,0.00005386656,0.000072964205,0.07337476,0.0029305979,0.00012297777,0.01396487,0.000035299272,0.0004028504,0.005665381],"study_design_scores_gemma":[0.00001470917,0.0014013273,0.963381,0.0000074827335,0.000020000367,0.03215323,0.0018623867,0.00018558941,0.00050203415,0.000012948056,0.00044680556,0.000012373187],"about_ca_topic_score_codex":0.040261034,"about_ca_topic_score_gemma":0.06671767,"teacher_disagreement_score":0.040261034,"about_ca_system_score_codex":0.00085558224,"about_ca_system_score_gemma":0.0003637721,"threshold_uncertainty_score":0.08005339},"labels":[],"label_agreement":null},{"id":"W4283382392","doi":"10.1093/mmy/myac047","title":"Clinical and microbiological analysis of fungal keratitis in Toronto, Canada: A 20-year study","year":2022,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Ocular Infections and Treatments","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto","funders":"American Pain Foundation","keywords":"Fungal keratitis; Keratitis; Medicine; Geography; Biology; Microbiology; Dermatology","score_opus":0.012494905085804331,"score_gpt":0.3310944325094289,"score_spread":0.3185995274236246,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283382392","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955022,0.0006628404,0.000055560104,0.00012567091,0.000008726401,0.000051693318,0.0024785465,0.0000062701843,0.0011083911],"genre_scores_gemma":[0.9966936,0.00073667907,0.0000860554,0.00009044049,0.000013031623,0.000020998214,0.00198773,0.0000037835175,0.0003676415],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989177,0.00007087352,0.0001102685,0.0001416035,0.00045207233,0.0003075105],"domain_scores_gemma":[0.9955349,0.0001582305,0.0011987941,0.00010402057,0.00193536,0.0010686676],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006011271,0.0005377869,0.0003899996,0.0017583418,0.0021224641,0.0013761302,0.00096090796,0.0006045376,0.0010567472],"category_scores_gemma":[0.002247675,0.00043734463,0.00058530364,0.00438686,0.0007497665,0.0007461915,0.0012314405,0.0007287667,0.0002624452],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004483564,0.00003136866,0.9980215,0.000019523814,0.000022061098,0.00020976548,0.00040383663,0.000028525044,0.0001251064,0.000009464728,0.00023535542,0.00084869395],"study_design_scores_gemma":[0.0000020865527,0.00004228547,0.99905807,0.000009243392,0.000010214071,0.00013438793,0.0004712195,0.00005180899,0.000017287453,0.0000028682662,0.00019669512,0.0000037905838],"about_ca_topic_score_codex":0.91256344,"about_ca_topic_score_gemma":0.92285055,"teacher_disagreement_score":0.08743656,"about_ca_system_score_codex":0.014003048,"about_ca_system_score_gemma":0.011295942,"threshold_uncertainty_score":0.1759029},"labels":[],"label_agreement":null},{"id":"W4292407378","doi":"10.1093/mmy/myac056","title":"<i>Cryptococcus neoformans</i> can utilize ferritin as an iron source","year":2022,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"National Research Foundation of Korea; National Institute of Allergy and Infectious Diseases; Ministry of Science, ICT and Future Planning; Canadian Institute for Advanced Research; Burroughs Wellcome Fund","keywords":"Cryptococcus neoformans; Ferritin; Microbiology; Biology; Cryptococcus; Iron deficiency; Cryptococcosis; Fungus; Intracellular; Biochemistry; Medicine; Botany; Anemia","score_opus":0.013003137020792957,"score_gpt":0.2944924778621057,"score_spread":0.2814893408413127,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4292407378","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9896404,0.0017247373,0.0019558612,0.00023442002,0.000026146341,0.000041666975,0.00048652003,0.00006398494,0.005826104],"genre_scores_gemma":[0.99251723,0.0006791225,0.0027486815,0.00017588062,0.00000736926,0.000013860651,0.00090747327,0.000007566396,0.0029429023],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991274,0.0000088927745,0.0000069256666,0.000016668928,0.000023559247,0.000031148902],"domain_scores_gemma":[0.99994504,0.000009259746,0.000016724052,0.0000064133046,0.000012219485,0.000010266871],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000106919775,0.0002785818,0.00009290358,0.00018019836,0.00020417178,0.0001938426,0.00016393031,0.00028903518,0.0012518018],"category_scores_gemma":[0.00012624168,0.000045513607,0.00018294378,0.00014203611,0.00012339905,0.00015681151,0.00020638587,0.00018107038,0.00033254246],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006955846,0.000031779346,0.004609945,0.00008888267,0.000005371241,0.00035935332,0.000031056446,0.000046222933,0.98971575,0.00009804881,0.00020323649,0.0047406396],"study_design_scores_gemma":[0.00000749418,0.00028350024,0.049993914,0.000042819443,0.000023652714,0.0033285352,0.00013816328,0.0008421366,0.93399,0.00011619457,0.01122283,0.000010782556],"about_ca_topic_score_codex":0.0066196555,"about_ca_topic_score_gemma":0.00610778,"teacher_disagreement_score":0.0066196555,"about_ca_system_score_codex":0.0002965248,"about_ca_system_score_gemma":0.00022222282,"threshold_uncertainty_score":0.013162255},"labels":[],"label_agreement":null},{"id":"W4296480011","doi":"10.1093/mmy/myac072.p305","title":"P305 Cirrhosis and fungal infections-a cocktail for catastrophe: a systematic review and meta-analysis with machine learning","year":2022,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Health Systems, Economic Evaluations, Quality of Life","field":"Economics, Econometrics and Finance","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Internal medicine; Relative risk; Meta-analysis; Cirrhosis; Fungemia; Gastroenterology; Surgery; Confidence interval; Mycosis","score_opus":0.4544312004771457,"score_gpt":0.4721160396498215,"score_spread":0.017684839172675826,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4296480011","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0031736793,0.99408215,0.00066499505,0.0004927135,0.0001434869,0.00037297668,0.00073108525,0.000027355301,0.00031155956],"genre_scores_gemma":[0.2002221,0.78922385,0.0038328432,0.0017811172,0.000666837,0.0020699168,0.0015576921,0.000038754348,0.0006069171],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9904529,0.0046116766,0.0027042683,0.00086360937,0.0010498689,0.0003176281],"domain_scores_gemma":[0.97105,0.023252808,0.003612155,0.00056964485,0.0012814576,0.00023395706],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.015258943,0.002117499,0.01336408,0.0055576228,0.00064512,0.0033690357,0.0019834803,0.002088836,0.007511459],"category_scores_gemma":[0.03537023,0.0010836434,0.033497173,0.0067023267,0.00074669725,0.0020293042,0.0014781731,0.0016886226,0.0005196921],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015167652,0.000031074385,0.007206472,0.522703,0.44180882,0.00012781947,0.00007155916,0.00050549675,0.00013677646,0.00018657802,0.0018354959,0.023870265],"study_design_scores_gemma":[0.00086068525,0.00021036214,0.006788498,0.08318364,0.90480393,0.00014376431,0.00004944189,0.00048655528,0.000089333844,0.000511616,0.0028384838,0.000033718534],"about_ca_topic_score_codex":0.005281998,"about_ca_topic_score_gemma":0.011993376,"teacher_disagreement_score":0.015258943,"about_ca_system_score_codex":0.0023845432,"about_ca_system_score_gemma":0.0035669652,"threshold_uncertainty_score":0.08069795},"labels":[],"label_agreement":null},{"id":"W4296515891","doi":"10.1093/mmy/myac072.s8.5c","title":"S8.5c MLST genotyping and phylogenetics of AD-hybrids","year":2022,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Multilocus sequence typing; Genotyping; Biology; Genotype; Allele; Genetics; Cryptococcus neoformans; Locus (genetics); Typing; Population; Haplotype; Hybrid; Gene; Medicine","score_opus":0.011265893094912657,"score_gpt":0.2723450937884784,"score_spread":0.2610792006935657,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4296515891","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97807777,0.00018930374,0.004998632,0.00006007068,0.000048609712,0.00013643596,0.011052398,0.00016118913,0.005275639],"genre_scores_gemma":[0.96263397,0.000083045496,0.013049979,0.000059227583,0.000010768085,0.00010470638,0.019882629,0.00008060137,0.00409506],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99973303,0.000041592994,0.00003356698,0.000073028896,0.000077601006,0.000041200143],"domain_scores_gemma":[0.99963355,0.00011361117,0.000076863405,0.00003235007,0.00009619259,0.000047418478],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025419178,0.00030537075,0.0002680419,0.0013044097,0.00029954096,0.00039101703,0.00020038245,0.0003174425,0.0058693658],"category_scores_gemma":[0.0005641287,0.00011787209,0.0002836672,0.0011709487,0.0001420602,0.00008173822,0.00024493987,0.00027718215,0.0015918313],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022800984,0.00021228749,0.16070312,0.00021867933,0.00007335718,0.0012912587,0.00071244244,0.00091564783,0.77152956,0.0005473595,0.0029557573,0.058560327],"study_design_scores_gemma":[0.000050351024,0.00097587815,0.64613485,0.00008281379,0.00013283022,0.0032389183,0.0010722132,0.008463853,0.30031314,0.0003663461,0.039122887,0.00004591361],"about_ca_topic_score_codex":0.0018744228,"about_ca_topic_score_gemma":0.0020362274,"teacher_disagreement_score":0.0058693658,"about_ca_system_score_codex":0.000260695,"about_ca_system_score_gemma":0.0001279135,"threshold_uncertainty_score":0.019634962},"labels":[],"label_agreement":null},{"id":"W4296516176","doi":"10.1093/mmy/myac072.p207","title":"P207 A rare case of disseminated Blastomycosis in an immunocompetent host: A report from North India","year":2022,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Abdomen; Dysuria; Blastomycosis; Blastomyces dermatitidis; Pathology; Dermatology; Surgery; Urinary system; Internal medicine","score_opus":0.01069662937795276,"score_gpt":0.2935445636115475,"score_spread":0.2828479342335948,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4296516176","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97874445,0.002430786,0.00074567914,0.000907009,0.00022313482,0.00012526856,0.00017541232,0.00010522025,0.016543206],"genre_scores_gemma":[0.99674124,0.0009302329,0.00023897215,0.00044443604,0.0001830279,0.000015836022,0.000060198116,0.000013460804,0.001372568],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99950325,0.00006445109,0.000052702166,0.00012803677,0.00007610797,0.00017544853],"domain_scores_gemma":[0.9992963,0.00018473955,0.00015533014,0.00007692311,0.00006345229,0.0002231702],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013830657,0.001092676,0.0007444031,0.0017418765,0.0030968983,0.0017752639,0.0008220174,0.002307561,0.0032014984],"category_scores_gemma":[0.0011680056,0.00090203446,0.00051305315,0.0014382113,0.0010188697,0.0009888503,0.0010311111,0.001340549,0.0010513985],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029437377,0.000056455254,0.011669693,0.000046378187,0.0000065942127,0.98498607,0.0004860015,0.000031396346,0.0009307081,0.00008678256,0.00043981883,0.0012306032],"study_design_scores_gemma":[0.000011094466,0.0000880874,0.013915279,0.000023542036,0.000010975055,0.9831699,0.0007082921,0.0000889807,0.00024720703,0.000062360115,0.0016626368,0.000011613435],"about_ca_topic_score_codex":0.0041676806,"about_ca_topic_score_gemma":0.004711312,"teacher_disagreement_score":0.0041676806,"about_ca_system_score_codex":0.00061332545,"about_ca_system_score_gemma":0.00061718386,"threshold_uncertainty_score":0.010710061},"labels":[],"label_agreement":null},{"id":"W4319300315","doi":"10.1093/mmy/myad016","title":"Cryptococcosis in domestic and wild animals: A review","year":2023,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior","keywords":"Cryptococcosis; Cryptococcus gattii; Cryptococcus; Medicine; Etiology; Amphotericin B; Intensive care medicine; Flucytosine; Pathology; Antifungal; Biology; Dermatology; Microbiology","score_opus":0.10339302370831982,"score_gpt":0.4660546464714386,"score_spread":0.3626616227631188,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319300315","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00032420483,0.99921143,0.00003153909,0.00011590036,0.00006344955,0.00001009387,0.00008079667,0.00000246417,0.00015997131],"genre_scores_gemma":[0.0024128382,0.9970487,0.00014003308,0.00016989408,0.0000718006,0.000014933429,0.000084975196,0.0000011586001,0.00005574149],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.99866235,0.00023373467,0.00062282244,0.00014713005,0.00027042162,0.000063523155],"domain_scores_gemma":[0.99281776,0.004964254,0.0013842873,0.000086961954,0.00060210744,0.00014476081],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016237414,0.00081371353,0.0022617823,0.010765858,0.00041605384,0.0016372381,0.00087702734,0.0012098178,0.0032545775],"category_scores_gemma":[0.0056662937,0.00038663353,0.0018143022,0.009216216,0.0004893067,0.0016273538,0.0007579781,0.0006477152,0.0003624496],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022811838,0.000053278673,0.002514527,0.6573495,0.0015122332,0.0008812198,0.000445556,0.00019730742,0.0008389354,0.000780618,0.01045267,0.32474598],"study_design_scores_gemma":[0.00008453786,0.0003655163,0.015914472,0.6231542,0.013397932,0.008758757,0.0008172098,0.00012497831,0.0005653862,0.0009942905,0.33574876,0.000073921256],"about_ca_topic_score_codex":0.0035960553,"about_ca_topic_score_gemma":0.0066514043,"teacher_disagreement_score":0.010765858,"about_ca_system_score_codex":0.0009662989,"about_ca_system_score_gemma":0.0041100387,"threshold_uncertainty_score":0.010887623},"labels":[],"label_agreement":null},{"id":"W4384120576","doi":"10.1093/mmy/myad069","title":"<i>In vitro</i> combination of antifungal drugs with tacrolimus (FK506) holds promise against clinical <i>Candida</i> species, including <i>Candida auris</i>","year":2023,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University","funders":"Tehran University of Medical Sciences and Health Services","keywords":"Anidulafungin; Caspofungin; Tacrolimus; Itraconazole; Fluconazole; Echinocandin; Calcineurin; Microbiology; Pharmacology; Candida parapsilosis; Candida glabrata; Candida auris; Candida albicans; Biology; Medicine; Chemistry; Antifungal; Internal medicine; Transplantation","score_opus":0.027043735941226665,"score_gpt":0.3341809677153878,"score_spread":0.30713723177416113,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4384120576","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9681363,0.01897581,0.0027036911,0.00046399457,0.000273226,0.00009846423,0.00057771965,0.00011829858,0.008652616],"genre_scores_gemma":[0.98967606,0.0047844,0.0029101593,0.00017144677,0.00014337583,0.000030952688,0.0009469711,0.000014166376,0.0013225757],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994331,0.00023402038,0.00005556309,0.00006296249,0.00011777679,0.00009653653],"domain_scores_gemma":[0.9997278,0.00007067717,0.00007496087,0.00003513037,0.00004253857,0.000048862985],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003305253,0.00058674806,0.00050115015,0.00028488736,0.00029169527,0.0005235965,0.00033196088,0.00032070928,0.0015455517],"category_scores_gemma":[0.00031182315,0.00015867721,0.0005458333,0.00024090802,0.0001568948,0.00016968121,0.00017686062,0.0004773362,0.0006398018],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00079902884,0.0005873941,0.0020664858,0.00023901869,0.000077855075,0.00012505346,0.000022881033,0.0002484965,0.98297805,0.00006148978,0.0007132922,0.012080904],"study_design_scores_gemma":[0.00007181206,0.008743796,0.011168541,0.000032187847,0.00028326074,0.001272094,0.00003671784,0.0005584675,0.9724275,0.000027768037,0.0053615924,0.000016251557],"about_ca_topic_score_codex":0.0010844505,"about_ca_topic_score_gemma":0.0029859375,"teacher_disagreement_score":0.0015455517,"about_ca_system_score_codex":0.00020584797,"about_ca_system_score_gemma":0.00024547058,"threshold_uncertainty_score":0.0051703453},"labels":[],"label_agreement":null},{"id":"W4387948603","doi":"10.1093/mmy/myad106","title":"Time to treat the climate and nature crisis as one indivisible global health emergency","year":2023,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Climate Change and Health Impacts","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Global health; Coronavirus disease 2019 (COVID-19); Climate change; Political science; Business; Medicine; Public health; Biology; Ecology; Internal medicine; Nursing","score_opus":0.024847424344187484,"score_gpt":0.3689329546979471,"score_spread":0.34408553035375966,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387948603","genre_codex":"editorial","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00024045925,0.014711907,0.00064373156,0.4736338,0.50651217,0.000024633055,0.000059454644,0.00017788209,0.0039959894],"genre_scores_gemma":[0.0057509216,0.01954234,0.0016509949,0.34171125,0.61033374,0.000060879833,0.00012447611,0.00028667468,0.02053858],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9880442,0.0036263003,0.0011158265,0.0013902191,0.004655263,0.0011682415],"domain_scores_gemma":[0.9218431,0.026037136,0.004720853,0.0026128176,0.02686116,0.017924951],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.018423447,0.0019453354,0.002381204,0.002266609,0.004616929,0.029969618,0.004308612,0.016891086,0.036144394],"category_scores_gemma":[0.08575946,0.001247436,0.0015285537,0.0014134638,0.005647264,0.02098359,0.006595146,0.034045637,0.021521261],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029991246,0.000019687413,0.00016303603,0.0002905154,0.00001680684,0.00021792449,0.00022590069,0.000038736976,0.0001064526,0.0020316886,0.97761256,0.019246686],"study_design_scores_gemma":[0.000017270377,0.000030085994,0.00022987739,0.00055722217,0.00001665571,0.00046297372,0.00083036354,0.00008550593,0.00007982102,0.0055183913,0.99213904,0.000032740925],"about_ca_topic_score_codex":0.0011301845,"about_ca_topic_score_gemma":0.0021577731,"teacher_disagreement_score":0.036144394,"about_ca_system_score_codex":0.0035688912,"about_ca_system_score_gemma":0.012185365,"threshold_uncertainty_score":0.120915055},"labels":[],"label_agreement":null},{"id":"W4388870346","doi":"10.1093/mmy/myad119","title":"Genotypic diversity and antifungal susceptibility of <i>Cryptococcus neoformans</i> species complex from China, including the diploid VNIII isolates from HIV-infected patients in Chongqing region","year":2023,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"National Natural Science Foundation of China; Università degli Studi di Milano","keywords":"Cryptococcus neoformans; Biology; Genotype; Ploidy; Antifungal; Microbiology; Cryptococcus; Cryptococcosis; Genetic diversity; Virology; Genetics; Gene; Medicine; Environmental health","score_opus":0.04046355689408507,"score_gpt":0.27238680910923385,"score_spread":0.23192325221514878,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388870346","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9996971,0.00006864954,0.00003860156,0.0000107766045,9.69617e-7,0.0000054589273,0.0000939743,5.781416e-7,0.000084023224],"genre_scores_gemma":[0.99962115,0.00005411581,0.000080143815,0.000015442316,0.0000026339392,0.0000045949205,0.00016999667,5.2120896e-7,0.000051353323],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99962604,0.000048905935,0.000078687226,0.00009883266,0.00007065333,0.00007693155],"domain_scores_gemma":[0.9995857,0.000066404995,0.00013870937,0.00003449201,0.00006667622,0.00010796763],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042915245,0.00026988465,0.0002943641,0.0010760081,0.0005847165,0.00034386976,0.00022049784,0.00022606074,0.0006096323],"category_scores_gemma":[0.00074200955,0.0001801793,0.00026622647,0.00095713214,0.00031787163,0.00019189018,0.00028761895,0.0001722234,0.00006028311],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014539988,0.000024900502,0.9860211,0.000034225657,0.000047834932,0.00041190718,0.000507046,0.00017682808,0.0079360325,0.000038707887,0.00009245405,0.0045634946],"study_design_scores_gemma":[0.0000060503694,0.00005746352,0.99822325,0.0000052172068,0.00001575531,0.00053314544,0.00027328823,0.0002208119,0.00046335833,0.000016497066,0.00018090004,0.0000042563865],"about_ca_topic_score_codex":0.019000674,"about_ca_topic_score_gemma":0.021637116,"teacher_disagreement_score":0.019000674,"about_ca_system_score_codex":0.0006786602,"about_ca_system_score_gemma":0.0006519222,"threshold_uncertainty_score":0.037780166},"labels":[],"label_agreement":null},{"id":"W4390120279","doi":"10.1093/mmy/myad134","title":"Machine learning to identify clinically relevant <i>Candida</i> yeast species","year":2023,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canada Foundation for Innovation; Government of Alberta","keywords":"Candida albicans; Budding yeast; Candida glabrata; Yeast; Biology; Corpus albicans; Candida auris; Convolutional neural network; Artificial intelligence; Microbiology; Candida infections; Antifungal; Saccharomyces cerevisiae; Computer science; Biochemistry","score_opus":0.030598132909327724,"score_gpt":0.3647091864544804,"score_spread":0.3341110535451527,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390120279","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8967904,0.005867311,0.087330565,0.00072988914,0.00019113523,0.0001088082,0.0010757158,0.0016507999,0.006255386],"genre_scores_gemma":[0.9620077,0.0010655487,0.033596944,0.00024614876,0.000033881315,0.000029398445,0.0013125316,0.00003373848,0.0016742161],"study_design_codex":"design_other","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9997428,0.000046703255,0.000019634763,0.00006370321,0.00006541464,0.00006164137],"domain_scores_gemma":[0.99954045,0.00015450842,0.00008304755,0.000037937723,0.00015269102,0.00003141557],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007383325,0.0009270024,0.00038902563,0.00085889566,0.0001836257,0.0007031635,0.00048025695,0.0006241071,0.0008055822],"category_scores_gemma":[0.0016207093,0.0002044919,0.0004962497,0.00040564762,0.00019312587,0.0005216813,0.00035984677,0.0005089115,0.00041126294],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011431318,0.00060966524,0.12670624,0.00053000625,0.00037941593,0.00059838756,0.000102179205,0.19844133,0.0950172,0.0011314614,0.0075421445,0.5677988],"study_design_scores_gemma":[0.000018385506,0.00023858288,0.019210828,0.000059404625,0.00010615005,0.0003785359,0.000052968157,0.9457386,0.03145437,0.00075877836,0.001960522,0.000022926366],"about_ca_topic_score_codex":0.0065468065,"about_ca_topic_score_gemma":0.008003195,"teacher_disagreement_score":0.0065468065,"about_ca_system_score_codex":0.00061311387,"about_ca_system_score_gemma":0.0005741527,"threshold_uncertainty_score":0.013017356},"labels":[],"label_agreement":null},{"id":"W4399477459","doi":"10.1093/mmy/myae061","title":"Clinical spectrum, phenotypic and molecular characterization, and antifungal susceptibility of an emerging human pathogen, <i>Acrophialophora</i>, from India","year":2024,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Science and Engineering Research Board; Department of Science and Technology, Government of Kerala; Indian Council of Medical Research","keywords":"Biology; Caspofungin; Ribosomal DNA; Fluconazole; Ribosomal RNA; Genotype; Locus (genetics); Microbiology; Internal transcribed spacer; Genotyping; Phylogenetic tree; Mycology; Antifungal; Genetics; Gene; Botany","score_opus":0.015630787532967715,"score_gpt":0.3360321471945771,"score_spread":0.3204013596616094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399477459","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99011177,0.0041985265,0.0005105721,0.00031784864,0.000030567102,0.00009443819,0.0007080899,0.000022623679,0.0040056296],"genre_scores_gemma":[0.995654,0.002486661,0.0007094074,0.00015064565,0.000033277563,0.000016004038,0.00047948744,0.000003967126,0.00046652227],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997218,0.00002791285,0.00007278028,0.000059991904,0.000063317995,0.00005414155],"domain_scores_gemma":[0.9995957,0.00007071955,0.00017349496,0.000022790926,0.00009052632,0.000046744233],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011677672,0.00023854489,0.00019511167,0.0009942547,0.00032907585,0.00062744453,0.00028638434,0.00022976198,0.00065843354],"category_scores_gemma":[0.00041532188,0.00012709781,0.00022687069,0.0007220598,0.00043212203,0.0002574955,0.00030159383,0.0002737809,0.00015816362],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005481415,0.00028616557,0.73832613,0.0018458905,0.000066999346,0.04960271,0.0032946647,0.00047981538,0.121953234,0.00040304253,0.0017247272,0.081468426],"study_design_scores_gemma":[0.000014076435,0.00065154146,0.87899494,0.0002016313,0.00008951849,0.09664304,0.0031649426,0.00019819468,0.011763939,0.00012208802,0.008121891,0.000034145458],"about_ca_topic_score_codex":0.0070822574,"about_ca_topic_score_gemma":0.0061878185,"teacher_disagreement_score":0.0070822574,"about_ca_system_score_codex":0.000247735,"about_ca_system_score_gemma":0.00044050987,"threshold_uncertainty_score":0.014082074},"labels":[],"label_agreement":null},{"id":"W4400515101","doi":"10.1093/mmy/myae068","title":"Growth on Douglas fir media facilitates<i>Cryptococcus</i>virulence factor production and enhances fungal survival against environmental and immune stressors","year":2024,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Cryptococcus gattii; Cryptococcosis; Biology; Cryptococcus neoformans; Cryptococcus; Virulence; Douglas fir; Microbiology; Immune system; Outbreak; Virulence factor; Botany; Immunology; Virology","score_opus":0.013093094004879267,"score_gpt":0.2583890508575632,"score_spread":0.24529595685268393,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400515101","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976622,0.00041895843,0.00025218318,0.000048226575,0.000014109969,0.000013663088,0.00014287523,0.000014058391,0.0014337283],"genre_scores_gemma":[0.99619967,0.00032843795,0.0012498305,0.00005977188,0.0000073759056,0.000008863318,0.0002829498,0.000007821552,0.001855356],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982965,0.00003880194,0.000011879243,0.000031409167,0.000033190296,0.00005502254],"domain_scores_gemma":[0.9997533,0.00006463133,0.000060123297,0.0000257927,0.00002974157,0.00006644958],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016532677,0.0003822314,0.0001960396,0.00017456964,0.00019076242,0.0005364553,0.0001469826,0.00019147858,0.0009691955],"category_scores_gemma":[0.00021967087,0.00009849834,0.0001748025,0.00009406092,0.00016774372,0.00021976807,0.0002764838,0.00032686803,0.00021848484],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017840532,0.00006904676,0.0011035887,0.0000246813,0.0000025054378,0.000048355265,0.00003091386,0.000015850432,0.9974456,0.00002131164,0.000026683898,0.0010331178],"study_design_scores_gemma":[0.0000104925975,0.0012464143,0.06488995,0.000026937163,0.000013308285,0.00024405247,0.00027191045,0.0003211917,0.93108743,0.000027291675,0.0018509942,0.000009889839],"about_ca_topic_score_codex":0.0052707456,"about_ca_topic_score_gemma":0.009575742,"teacher_disagreement_score":0.0052707456,"about_ca_system_score_codex":0.00035759396,"about_ca_system_score_gemma":0.0003347426,"threshold_uncertainty_score":0.0104801655},"labels":[],"label_agreement":null},{"id":"W4403502519","doi":"10.1093/mmy/myae101","title":"Clinical importance of cerebrospinal fluid protein levels in HIV-associated cryptococcal meningitis: Insights from a prospective cohort study in Uganda","year":2024,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Fogarty International Center; National Institute of Allergy and Infectious Diseases; National Institute of Neurological Disorders and Stroke; Medical Research Council; Grand Challenges Canada; Department of Health and Social Care; European and Developing Countries Clinical Trials Partnership; Wellcome Trust; Styrelsen för Internationellt Utvecklingssamarbete","keywords":"Cryptococcal meningitis; Cerebrospinal fluid; Prospective cohort study; Medicine; Human immunodeficiency virus (HIV); Meningitis; Cohort; Cryptococcosis; Immunology; Cohort study; Virology; Internal medicine; Viral disease; Pediatrics","score_opus":0.024706437945130166,"score_gpt":0.34933745352050316,"score_spread":0.324631015575373,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403502519","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99927515,0.00044260637,0.000035509926,0.000020729492,0.0000040772493,0.0000071884215,0.00014973851,8.111993e-7,0.00006422785],"genre_scores_gemma":[0.9995894,0.00017185636,0.000053554744,0.000019105184,0.000004615332,0.000010376794,0.00011210712,0.0000010787489,0.000037951926],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99864143,0.0006277489,0.00015746111,0.00026432445,0.000102191196,0.00020685718],"domain_scores_gemma":[0.9970439,0.0006685685,0.0012279161,0.0004004796,0.00024046142,0.00041872554],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022364277,0.000509722,0.0006083388,0.0007631483,0.0007289255,0.001115068,0.0004783905,0.0005908323,0.00069430686],"category_scores_gemma":[0.005273364,0.0005877043,0.0008723148,0.001144101,0.0003974794,0.00048965873,0.0008768636,0.0007109576,0.000117643816],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00070282625,0.000033273776,0.9976267,0.000017678984,0.00017684828,0.00012696607,0.0001392431,0.000029658018,0.0001263328,0.000009657867,0.000052012638,0.0009588501],"study_design_scores_gemma":[0.000041670533,0.00025446597,0.9984705,0.000022955595,0.00014419538,0.00036918046,0.00030398046,0.00015536038,0.00004664475,0.000024746654,0.00015704727,0.000009358222],"about_ca_topic_score_codex":0.0048630955,"about_ca_topic_score_gemma":0.005546092,"teacher_disagreement_score":0.0048630955,"about_ca_system_score_codex":0.0003376432,"about_ca_system_score_gemma":0.00046792513,"threshold_uncertainty_score":0.011827469},"labels":[],"label_agreement":null},{"id":"W4403889545","doi":"10.1093/mmy/myae105","title":"Geraniol inhibits both planktonic cells and biofilms of the <i>Candida parapsilosis</i> species complex: Highlight for the improved efficacy of amphotericin B, caspofungin and fluconazole plus Geraniol","year":2024,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Transport Canada","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico","keywords":"Geraniol; Candida parapsilosis; Microbiology; Fluconazole; Broth microdilution; Biology; Amphotericin B; Caspofungin; Ketoconazole; Minimum inhibitory concentration; Pharmacology; Antimicrobial; Chemistry; Botany; Antifungal; Essential oil","score_opus":0.01638267557501571,"score_gpt":0.2699281423496724,"score_spread":0.25354546677465667,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403889545","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9824174,0.014621002,0.000622967,0.0003467089,0.00006138055,0.000032484575,0.00012929009,0.000033319364,0.0017355038],"genre_scores_gemma":[0.99089324,0.0059668752,0.0011423326,0.00015225014,0.000027994824,0.000013320648,0.00017502926,0.000007339822,0.0016216129],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999279,0.000016177075,0.0000081671,0.000010415998,0.000018322811,0.000018925602],"domain_scores_gemma":[0.9999553,0.000008843759,0.000009385242,0.0000035538988,0.000010175282,0.000012745171],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008999975,0.00038036815,0.00029244932,0.00023553298,0.00009843477,0.00017489986,0.00016210561,0.00020975806,0.0013033232],"category_scores_gemma":[0.000100080986,0.00009587605,0.00035583836,0.00010034838,0.00012605787,0.00020504912,0.0002100791,0.00032568132,0.00014710541],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046582546,0.00011945506,0.0003886261,0.00025665204,0.000020726646,0.00010808406,0.000021582082,0.00007773148,0.988059,0.00003611187,0.00009930788,0.010346872],"study_design_scores_gemma":[0.00009324107,0.004307967,0.016657533,0.00004604934,0.00015052501,0.000933478,0.000103187,0.0006570434,0.97170335,0.00007336731,0.005260615,0.000013661552],"about_ca_topic_score_codex":0.0005332451,"about_ca_topic_score_gemma":0.0012536442,"teacher_disagreement_score":0.0013033232,"about_ca_system_score_codex":0.000088313616,"about_ca_system_score_gemma":0.0001248706,"threshold_uncertainty_score":0.00436002},"labels":[],"label_agreement":null},{"id":"W4406167273","doi":"10.1093/mmy/myae115","title":"The evolution of HIV-associated cryptococcal meningitis in Uganda from 2010 to 2022","year":2024,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Fogarty International Center; National Institute of Neurological Disorders and Stroke; Medical Research Council; National Institute of Allergy and Infectious Diseases; Grand Challenges Canada; Wellcome Trust","keywords":"Medicine; Cryptococcosis; Cohort; Meningitis; Cryptococcal meningitis; Flucytosine; Lumbar puncture; Population; Cohort study; Pediatrics; Prospective cohort study; Internal medicine; Amphotericin B; Human immunodeficiency virus (HIV); Immunology; Cerebrospinal fluid; Viral disease; Antifungal; Environmental health","score_opus":0.008793627784380158,"score_gpt":0.28272413473568325,"score_spread":0.2739305069513031,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406167273","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99673873,0.001114478,0.000051341918,0.00025528407,0.000018547309,0.000017308632,0.00085744436,0.000007248153,0.00093959767],"genre_scores_gemma":[0.99678624,0.001125441,0.0001360679,0.00024223275,0.000021605747,0.000052826643,0.0012791792,0.000007368286,0.0003491653],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999094,0.00018611457,0.00008194655,0.00012607286,0.00009246083,0.00041941207],"domain_scores_gemma":[0.99870706,0.00009386475,0.0005758853,0.000062281615,0.00026711923,0.00029377543],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012353332,0.00048322428,0.00042427063,0.001818743,0.001180819,0.0020295226,0.0005777615,0.0007814722,0.0012357691],"category_scores_gemma":[0.0033590214,0.00047944256,0.00041896058,0.0026040706,0.0005891917,0.0012920955,0.0023734642,0.0010602039,0.0003522307],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026003964,0.00004535883,0.98626167,0.000076057215,0.000051733285,0.0005117699,0.0014532618,0.00020005013,0.0004027713,0.000111579895,0.0008550568,0.00977057],"study_design_scores_gemma":[0.000008863374,0.00007528546,0.9941911,0.0001438154,0.000016609432,0.0007829084,0.0024310676,0.00014087406,0.00010335692,0.000060609986,0.00203154,0.000014072575],"about_ca_topic_score_codex":0.0337418,"about_ca_topic_score_gemma":0.040299006,"teacher_disagreement_score":0.0337418,"about_ca_system_score_codex":0.0016358761,"about_ca_system_score_gemma":0.0018461989,"threshold_uncertainty_score":0.06709081},"labels":[],"label_agreement":null},{"id":"W4407358142","doi":"10.1093/mmy/myaf015","title":"Invasive aspergillosis caused by cryptic species in transplant recipients: A review","year":2025,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Aspergillosis; Species complex; Biology; Medicine; Immunology; Zoology; Genetics","score_opus":0.03375701865844621,"score_gpt":0.3556590731273149,"score_spread":0.32190205446886866,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407358142","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00040564282,0.9990879,0.00005737776,0.00009165478,0.00008111309,0.0000036467295,0.000018371138,0.000004733977,0.00024948042],"genre_scores_gemma":[0.0019237521,0.99766564,0.000118462485,0.00007934899,0.000118059055,0.000004485726,0.000030812473,9.877278e-7,0.000058496167],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996501,0.000046113073,0.00013700809,0.000063823165,0.00008238972,0.000020515212],"domain_scores_gemma":[0.99877053,0.00070675963,0.0002707939,0.000021403888,0.00015587402,0.000074710755],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053708616,0.0008845225,0.0014961539,0.0058940016,0.0003431398,0.0010756375,0.00097316765,0.00093782425,0.0019354749],"category_scores_gemma":[0.0012801363,0.00033003313,0.0008492323,0.005006409,0.0004323942,0.0015949757,0.00050609367,0.0007596981,0.0005081834],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015129762,0.00012514647,0.0038664541,0.0988312,0.00042774036,0.002760016,0.00030984537,0.00038384163,0.0018025845,0.0009660629,0.02165593,0.86871994],"study_design_scores_gemma":[0.000057145666,0.0004716065,0.023721114,0.07000913,0.0028938702,0.05712047,0.0008421819,0.00048037313,0.0011734295,0.001696859,0.8414182,0.00011568218],"about_ca_topic_score_codex":0.0015721163,"about_ca_topic_score_gemma":0.0016411258,"teacher_disagreement_score":0.0058940016,"about_ca_system_score_codex":0.00039125865,"about_ca_system_score_gemma":0.0013818607,"threshold_uncertainty_score":0.0064748526},"labels":[],"label_agreement":null},{"id":"W4408139988","doi":"10.1093/mmy/myaf019","title":"Comparison of broth microdilution and Etest® methods for susceptibility testing of amphotericin B in <i>Candida auris</i>","year":2025,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; BC Centre for Disease Control; University of Toronto; Ste. Anne's Hospital; Dr. Georges-L.-Dumont University Hospital Centre; Manitoba Health; Provincial Laboratory of Public Health; University of Calgary; University of Manitoba; Toronto Public Health; Public Health Agency of Canada","funders":"","keywords":"Etest; Candida auris; Broth microdilution; Amphotericin B; Microbiology; Antifungal; Biology; Medicine; Minimum inhibitory concentration; Antibiotics","score_opus":0.041612565146661624,"score_gpt":0.46296985244861455,"score_spread":0.42135728730195293,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408139988","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9405278,0.0081820395,0.043780353,0.00065363734,0.000727199,0.00056638103,0.0012765139,0.00026750806,0.004018582],"genre_scores_gemma":[0.8499456,0.004103128,0.1397989,0.00048402732,0.00025981927,0.0009711001,0.0020094297,0.00013209184,0.0022959714],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.95773613,0.022024373,0.004830979,0.0025380333,0.012292983,0.00057735766],"domain_scores_gemma":[0.951325,0.030766731,0.005871628,0.0030416015,0.008187616,0.0008073362],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.018221006,0.0009678321,0.0011338914,0.0024877966,0.00032946758,0.0015747899,0.0013309784,0.0012950229,0.00070632814],"category_scores_gemma":[0.033501234,0.0006059319,0.0007101395,0.0018736663,0.00082443655,0.0009126863,0.0010662301,0.0011722255,0.0005392092],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.030224679,0.003712441,0.23526958,0.0022590568,0.001556774,0.00044814698,0.0040919613,0.00438864,0.4820558,0.00199194,0.0020688795,0.23193206],"study_design_scores_gemma":[0.0010897557,0.04248466,0.43709764,0.0005227592,0.0012535058,0.004353152,0.0017903165,0.03585536,0.4596465,0.0012306736,0.01404182,0.00063393643],"about_ca_topic_score_codex":0.0013158997,"about_ca_topic_score_gemma":0.0019477069,"teacher_disagreement_score":0.018221006,"about_ca_system_score_codex":0.000542984,"about_ca_system_score_gemma":0.0006619516,"threshold_uncertainty_score":0.09636307},"labels":[],"label_agreement":null},{"id":"W4409352783","doi":"10.1093/mmy/myaf036","title":"A longitudinal study assessing <i>Aspergillus</i> polymerase chain reaction (PCR) performance through participation in external quality assessment schemes from 2019 to 2022","year":2025,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Aspergillus fumigatus; Aspergillus; Quality assessment; Quality (philosophy); Aspergillus niger; External quality assessment; Biology; Biotechnology; Microbiology; Medicine; Pathology","score_opus":0.026228124107748583,"score_gpt":0.4117430452413863,"score_spread":0.38551492113363767,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409352783","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":"methods","model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":"methods","domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9882344,0.0022001963,0.00227111,0.0005635449,0.00013657975,0.00021583887,0.0045032995,0.00004558521,0.0018295591],"genre_scores_gemma":[0.99335116,0.00035641485,0.0010297765,0.0005197753,0.000059655624,0.00019298233,0.0029920219,0.000014314181,0.0014838304],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9963858,0.0018848134,0.0002441987,0.0007629248,0.00038873035,0.00033342495],"domain_scores_gemma":[0.987832,0.003466753,0.0031840152,0.0016881922,0.0028991369,0.0009300008],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.007998472,0.00041188754,0.0003972294,0.0005081139,0.0007380983,0.001157955,0.00038983734,0.0009481356,0.0018655423],"category_scores_gemma":[0.013453041,0.00033323208,0.0011545236,0.00097240123,0.00029711312,0.0005925357,0.0005715463,0.0010321426,0.0005145548],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.012621004,0.00070143415,0.95869344,0.00036830007,0.003004443,0.00016072922,0.00051803736,0.00019043358,0.0023507515,0.00027978153,0.0030736402,0.018037936],"study_design_scores_gemma":[0.0006178549,0.0059600044,0.98428106,0.00014108345,0.0026291355,0.00023884847,0.00020240538,0.00046676712,0.0010149585,0.0001802696,0.004237687,0.000029937448],"about_ca_topic_score_codex":0.009657164,"about_ca_topic_score_gemma":0.0103567,"teacher_disagreement_score":0.99200153,"about_ca_system_score_codex":0.0009030328,"about_ca_system_score_gemma":0.0011491079,"threshold_uncertainty_score":0.042300463},"labels":[],"label_agreement":null},{"id":"W4409527948","doi":"10.1093/mmy/myaf040","title":"Optimization and clinical evaluation of a 5.8S rRNA quantitative PCR assay for the diagnosis of talaromycosis","year":2025,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Allergy and Infectious Diseases; Dowager Countess Eleanor Peel Trust; Federation of European Microbiological Societies; National Institute for Health and Care Research","keywords":"Penicillium marneffei; DNA extraction; Biology; Whole blood; Polymerase chain reaction; Blood culture; Microbiology; Real-time polymerase chain reaction; Lysis; Dimorphic fungus; Assay sensitivity; White blood cell; Yeast; Molecular biology; Immunology; Medicine; Pathology; Human immunodeficiency virus (HIV); Antibiotics; Gene","score_opus":0.08103670506118105,"score_gpt":0.4495700096001707,"score_spread":0.36853330453898964,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409527948","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.776253,0.00392757,0.2120543,0.00084713375,0.00027795674,0.0018804247,0.0008851067,0.0007914012,0.0030831126],"genre_scores_gemma":[0.8898465,0.0010178504,0.105634816,0.0006008901,0.0000850518,0.0008237621,0.000773627,0.000106593536,0.0011109314],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9877246,0.0044337064,0.0007509981,0.0016968932,0.00496481,0.00042897652],"domain_scores_gemma":[0.9945886,0.0024125897,0.0006989863,0.00029769394,0.0018479858,0.00015425331],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.011681547,0.0009528719,0.0010528037,0.0011106699,0.0003116472,0.0011805209,0.0007258457,0.0010101565,0.00058291643],"category_scores_gemma":[0.012612306,0.00061493035,0.00049271324,0.0005272434,0.0010768833,0.00040332443,0.00042630418,0.00082687906,0.000446084],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00094615394,0.00066330703,0.033638336,0.00034698236,0.00008231425,0.00025617995,0.00047252938,0.003358189,0.9246866,0.00025673246,0.00041608114,0.0348766],"study_design_scores_gemma":[0.00016007555,0.009020889,0.05987633,0.0002362113,0.00030148795,0.0020616516,0.00045016204,0.04572838,0.87392795,0.00041492804,0.007671904,0.0001500211],"about_ca_topic_score_codex":0.0007398567,"about_ca_topic_score_gemma":0.0010916913,"teacher_disagreement_score":0.011681547,"about_ca_system_score_codex":0.00059615547,"about_ca_system_score_gemma":0.0007813661,"threshold_uncertainty_score":0.061778665},"labels":[],"label_agreement":null},{"id":"W4413104788","doi":"10.1093/mmy/myaf072","title":"Spectrum of clinically significant melanized fungi in NIH hospitalized patients and their antifungal susceptibility profiles","year":2025,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"National Institutes of Health","keywords":"Micafungin; Voriconazole; Microbiology; Amphotericin B; Terbinafine; Biology; Phaeohyphomycosis; Antifungal; Internal transcribed spacer; Itraconazole; Ribosomal RNA; Genetics","score_opus":0.008152657075625966,"score_gpt":0.28967741632952887,"score_spread":0.2815247592539029,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413104788","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99928063,0.00022576051,0.000028625303,0.00001929792,0.0000015025387,0.00000626096,0.00007491685,0.0000032238436,0.00035970222],"genre_scores_gemma":[0.9997111,0.00007715764,0.000066632325,0.000016195701,0.0000050205354,0.0000036188985,0.00008951067,8.0076234e-7,0.000030089706],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997514,0.00004620777,0.000045587498,0.00004346825,0.000047549198,0.000065750755],"domain_scores_gemma":[0.9995303,0.00008042809,0.00017386822,0.000021229616,0.00005871162,0.00013541257],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018775911,0.00025812132,0.00029686905,0.000744711,0.00032128827,0.00034093033,0.00016436639,0.00025961254,0.00090662576],"category_scores_gemma":[0.0011616616,0.00017111261,0.00019817286,0.0005079541,0.00022912606,0.00023606872,0.00028312113,0.00023823214,0.00011313163],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018524363,0.000053858657,0.9936289,0.000011118666,0.000016464639,0.0012112745,0.00009829005,0.00003935993,0.002162445,0.0000131888555,0.000075126525,0.0025047453],"study_design_scores_gemma":[0.000006871444,0.00020413513,0.9940361,0.000009169901,0.000015390313,0.004883896,0.00026726405,0.00013379571,0.00030895058,0.000015594585,0.000114192844,0.00000467335],"about_ca_topic_score_codex":0.0018122371,"about_ca_topic_score_gemma":0.0019565783,"teacher_disagreement_score":0.0018122371,"about_ca_system_score_codex":0.0002104235,"about_ca_system_score_gemma":0.00014118917,"threshold_uncertainty_score":0.0036033392},"labels":[],"label_agreement":null},{"id":"W7116895200","doi":"10.1093/mmy/myaf120","title":"Analytical validation: Comparison of two laboratory-based methods for CSF quantitative cryptococcal cultures","year":2025,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Neurological Disorders and Stroke; Fogarty International Center; National Institute of Allergy and Infectious Diseases","keywords":"Cryptococcal meningitis; Agar; Cerebrospinal fluid; Cryptococcosis; Meningitis; Concordance; Cryptococcus neoformans; Agar plate","score_opus":0.062413678538223244,"score_gpt":0.5471154818882705,"score_spread":0.4847018033500473,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7116895200","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.61756474,0.011538964,0.35173878,0.00088253076,0.00233929,0.0033722112,0.00278204,0.002290055,0.007491456],"genre_scores_gemma":[0.7089175,0.0021825437,0.27913478,0.00080132723,0.00035713418,0.0026343483,0.003163641,0.00053435727,0.0022743985],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.8595376,0.06378646,0.008566549,0.015175436,0.05130255,0.001631421],"domain_scores_gemma":[0.8598879,0.07322792,0.011664606,0.014121221,0.039365977,0.0017323227],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.05309786,0.0020226305,0.0018056708,0.0046568643,0.001349079,0.0035558816,0.003138472,0.003747478,0.0011934289],"category_scores_gemma":[0.13454685,0.0014974938,0.0015288577,0.0028277377,0.003202867,0.001207391,0.0024105601,0.0019428837,0.0013593226],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.015740562,0.004046759,0.2793529,0.0042651473,0.0035278504,0.00046167002,0.0079545295,0.0070551694,0.48002777,0.0034242014,0.0035051117,0.19063836],"study_design_scores_gemma":[0.0011025907,0.015678283,0.37454662,0.001582199,0.0022362676,0.004096844,0.0021669026,0.06795255,0.50872546,0.0023717089,0.01882732,0.0007132948],"about_ca_topic_score_codex":0.004041731,"about_ca_topic_score_gemma":0.004294343,"teacher_disagreement_score":0.05309786,"about_ca_system_score_codex":0.0016148362,"about_ca_system_score_gemma":0.002259054,"threshold_uncertainty_score":0.28081167},"labels":[],"label_agreement":null}]}